
Lcy11g005940 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCCTTCTCCTCTGCTTCTGCTCATCATCTAATCATATAATGGCGTTTTCAGAAGAAATCATGATGGCAACTCCAATTCCCAGCTGCCCAATTCCTCCAACTCTCTCATCATTTTCTCTGCTCAAACTTTGCTGCCATGGACCCTATCCATGCCTCCCTTCATTCTTCTCCTTCAAGCAATCAGCCTCGGATTCATGAACCTTTCGATCTTTTAGACCTCTGTTGGTTCTTTGATAATCTGCTTATTACGAGGAAGCCCAGGATTTTGTCCGCCTCCCACTCTGATCCTTGTCTTTCTGAAGTTGCCCACCAGGTGTTTGTTGAAAGTCCTGCTGCTGATGTCTGCTCATCTGCTTTGGATGGGGCTGTTTCGTTTGGGAATGGTGGTGCTAAACGTCGGAATCTGCTCCGAACGCCGTCGTTGCCGTGCCGTATGGATCGAGGGGAAGGAATTCGAGAGAAAGGAGATGGTTCTAGGCCATTGTTAGAGCATGGTGTGCTTGTTGAAAGTCCTGCTGATGATGCTTGCTCATCTGCTTTGGACATGGATGTTTCGCCCGGAAATGGTGGTGATGGACGTAAGAATCTTCTTCGAATGCCGTCGTTACCGTCCCGTGTGGACCGAGAGGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATCATCAGAGAATGGTGTGTTTGTTGGAAGTCCTGCTGATAATGCCTGCTTGTCTGCTTTGGATATGGATGTTACACCGAGAAATGACGGCGGTAAACGTCGGAGTCTGCTCCGAACGCCATCCTTACCGTCCCGTGTGGAACGAGAAGAAGGTATTCGAGAGAAAGGGAATGGTTCCAGGCCATTGTTAGAGCATGGTTTGCTTCAAAAACCTGCCAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAATCGGCAAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAAGGATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTACTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGGTATTGCAAAAATGTTGTTCTGTTTCAACTATCTCATATCATTCTTCACGTGTGCTTGAATGACATTCGAGCTTGCTAATGGTTTAGAGTAAACACTAAACATAACTAGAGAATGGTTGAACATAGTATCATAACAAGGAGTCTTAAATTCAAACATTTGCAATGTAATTCAATCCATATGTTGAGCTGTATACTAATGTTTGAGCCCTGATGTGATTGTGAAAAGATTACATTGTGATAAGGCTTGGGATGCATAGAGTGACTCTCCAAAGTCCTAGACTCAAACCATAGGTGTTAGAAACGAGCATTATGCAAGAAGTGGAACCTTTAACATTCCACTTATCTTTACTCAAACGTTTGAATGTCTGAAATGAGTTAAACATGATACATTCTCCTTAAGGATATCATGACTAAAATAAACTTCATTTGTTGTATTCTTCTTTCAATAATATTTGGTGCTTATTCACAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACGAGCAACGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAGAAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAATTGCAAGGTTTCAAGGACTTGGGATTCACATTTGACAAAAAAGATATAAACCCAACAATGGTTGACATAATTCCAGGGTTGAGAGAGAAAAAGGAGGAAGAGTTGGAGAGTGAAAGGACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAAATCATCTTCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAAATGGTGAGAGCTTTTGAACATACCATGTCATGGGAAATTTGCCTAGGTTGCCCCATTTTTTAAAGTCAAATATAGCATTTTCTAAAAATTTAGGTTACAACATCATTTTGGTCCTATACTTTGGGACTCATCCGATTTTAGTCCATGTACTTTCAAATGTCCAAAATTTAGTCCCGATACATTCAATAAATCTTAAAATTAGTCTTCATCGTTGGTTTGAAACTAACTCTTATCTAACTTGTCAAAATAATAATAATTTTCATTAAAAAAAAAACATTGTGAATATATTTTCAAAATGAAAAATACCTGGCTGGGCACTGGCATTAAAGTGTTGACAACTAGGAAGAGATAAAAAAAGTTCTCATTTTTTACCTTTCTCTTTCTTAGTTGTCAAGATTTTAATAGAGTATGTAGAGAGATCCTTACATACCGGTATGCAGCCAACTACTTCGCTAGGGACTCATTTTAAGATTGACTAAAAGTATGGTGACTAATTTGGATAAATAGAAGTACAAAGACTAAAATAGAAGGAATTTCAAAGTACATGGACTGAAATAGTATTTTAATTAAAAAATTATTAATAGACGATCAATTATAATCTATTGTTTTATTTAAAATTTTATTTTTCCAACGGCTAATTTTATAACATTTTGTGTCTATTATGCTAAATTTGCAGGCACCCAAAACTCGAATCCAAATTGGATTGGAGTCCAAATGAAGTTCATTTTATTGGAGAAACTACAGTAAAAGGTGAAGGACAAACATTTGAACGAGCTTTGAGAAGAGCAAAATATAGAAATTGTCACATATTTCACCAACAAACAAAGAGAAAATGGGCTCAATGAAATGTTTGTAAATTGCAAACATGTTTGTCTGTTTGAAGCTACAAAATGTTTGCTTCAAATTTGAGGAAGTTGTTTGCATTGGAAATTGGGCCTCTTCATCATCTGCCTTTCATCAA TGGCCTTCTCCTCTGCTTCTGCTCATCATCTAATCATATAATGGCGTTTTCAGAAGAAATCATGATGGCAACTCCAATTCCCAGCTGCCCAATTCCTCCAACTCTCTCATCATTTTCTCTGCTCAAACTTTGCTGCCATGGACCCTATCCATGCCTCCCTTCATTCTTCTCCTTCAAGCAATCAGCCTCGGATTCATGAACCTTTCGATCTTTTAGACCTCTGTTGGTTCTTTGATAATCTGCTTATTACGAGGAAGCCCAGGATTTTGTCCGCCTCCCACTCTGATCCTTGTCTTTCTGAAGTTGCCCACCAGGTGTTTGTTGAAAGTCCTGCTGCTGATGTCTGCTCATCTGCTTTGGATGGGGCTGTTTCGTTTGGGAATGGTGGTGCTAAACGTCGGAATCTGCTCCGAACGCCGTCGTTGCCGTGCCGTATGGATCGAGGGGAAGGAATTCGAGAGAAAGGAGATGGTTCTAGGCCATTGTTAGAGCATGGTGTGCTTGTTGAAAGTCCTGCTGATGATGCTTGCTCATCTGCTTTGGACATGGATGTTTCGCCCGGAAATGGTGGTGATGGACGTAAGAATCTTCTTCGAATGCCGTCGTTACCGTCCCGTGTGGACCGAGAGGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATCATCAGAGAATGGTGTGTTTGTTGGAAGTCCTGCTGATAATGCCTGCTTGTCTGCTTTGGATATGGATGTTACACCGAGAAATGACGGCGGTAAACGTCGGAGTCTGCTCCGAACGCCATCCTTACCGTCCCGTGTGGAACGAGAAGAAGGTATTCGAGAGAAAGGGAATGGTTCCAGGCCATTGTTAGAGCATGGTTTGCTTCAAAAACCTGCCAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAATCGGCAAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAAGGATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTACTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACGAGCAACGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAGAAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAATTGCAAGGTTTCAAGGACTTGGGATTCACATTTGACAAAAAAGATATAAACCCAACAATGGTTGACATAATTCCAGGGTTGAGAGAGAAAAAGGAGGAAGAGTTGGAGAGTGAAAGGACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAAATCATCTTCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAAATGGCACCCAAAACTCGAATCCAAATTGGATTGGAGTCCAAATGAAGTTCATTTTATTGGAGAAACTACAGTAAAAGGTGAAGGACAAACATTTGAACGAGCTTTGAGAAGAGCAAAATATAGAAATTGTCACATATTTCACCAACAAACAAAGAGAAAATGGGCTCAATGAAATGTTTGTAAATTGCAAACATGTTTGTCTGTTTGAAGCTACAAAATGTTTGCTTCAAATTTGAGGAAGTTGTTTGCATTGGAAATTGGGCCTCTTCATCATCTGCCTTTCATCAA ATGGACCCTATCCATGCCTCCCTTCATTCTTCTCCTTCAAGCAATCAGCCTCGGATTCATGAACCTTTCGATCTTTTAGACCTCTGTTGGTTCTTTGATAATCTGCTTATTACGAGGAAGCCCAGGATTTTGTCCGCCTCCCACTCTGATCCTTGTCTTTCTGAAGTTGCCCACCAGGTGTTTGTTGAAAGTCCTGCTGCTGATGTCTGCTCATCTGCTTTGGATGGGGCTGTTTCGTTTGGGAATGGTGGTGCTAAACGTCGGAATCTGCTCCGAACGCCGTCGTTGCCGTGCCGTATGGATCGAGGGGAAGGAATTCGAGAGAAAGGAGATGGTTCTAGGCCATTGTTAGAGCATGGTGTGCTTGTTGAAAGTCCTGCTGATGATGCTTGCTCATCTGCTTTGGACATGGATGTTTCGCCCGGAAATGGTGGTGATGGACGTAAGAATCTTCTTCGAATGCCGTCGTTACCGTCCCGTGTGGACCGAGAGGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATCATCAGAGAATGGTGTGTTTGTTGGAAGTCCTGCTGATAATGCCTGCTTGTCTGCTTTGGATATGGATGTTACACCGAGAAATGACGGCGGTAAACGTCGGAGTCTGCTCCGAACGCCATCCTTACCGTCCCGTGTGGAACGAGAAGAAGGTATTCGAGAGAAAGGGAATGGTTCCAGGCCATTGTTAGAGCATGGTTTGCTTCAAAAACCTGCCAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAATCGGCAAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAAGGATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTACTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACGAGCAACGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAGAAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAATTGCAAGGTTTCAAGGACTTGGGATTCACATTTGACAAAAAAGATATAAACCCAACAATGGTTGACATAATTCCAGGGTTGAGAGAGAAAAAGGAGGAAGAGTTGGAGAGTGAAAGGACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAAATCATCTTCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAA MDPIHASLHSSPSSNQPRIHEPFDLLDLCWFFDNLLITRKPRILSASHSDPCLSEVAHQVFVESPAADVCSSALDGAVSFGNGGAKRRNLLRTPSLPCRMDRGEGIREKGDGSRPLLEHGVLVESPADDACSSALDMDVSPGNGGDGRKNLLRMPSLPSRVDREEGIQEKGNDSRPSSENGVFVGSPADNACLSALDMDVTPRNDGGKRRSLLRTPSLPSRVEREEGIREKGNGSRPLLEHGLLQKPAKPPYVERKEEGTRSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKGFGEKEAAARIRNSTQPNLSEFFPTRQEILEKNFSLPMCRIPTSNDEMWHQFLIQMRRRRSQSELESEELQGFKDLGFTFDKKDINPTMVDIIPGLREKKEEELESERTRRPYLSEAWVLQNHLLPPIPKWDTRKSAEDMKQQIKFWARAVASNVH Homology
BLAST of Lcy11g005940 vs. ExPASy TrEMBL
Match: A0A6J1E4T2 (uncharacterized protein LOC111430741 OS=Cucurbita moschata OX=3662 GN=LOC111430741 PE=4 SV=1) HSP 1 Score: 706.8 bits (1823), Expect = 5.7e-200 Identity = 374/514 (72.76%), Postives = 404/514 (78.60%), Query Frame = 0
BLAST of Lcy11g005940 vs. ExPASy TrEMBL
Match: A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 5.9e-197 Identity = 356/455 (78.24%), Postives = 393/455 (86.37%), Query Frame = 0
BLAST of Lcy11g005940 vs. ExPASy TrEMBL
Match: A0A5D3CIY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001080 PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 5.9e-197 Identity = 356/455 (78.24%), Postives = 393/455 (86.37%), Query Frame = 0
BLAST of Lcy11g005940 vs. ExPASy TrEMBL
Match: A0A6J1J9E4 (uncharacterized protein LOC111482920 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482920 PE=4 SV=1) HSP 1 Score: 692.2 bits (1785), Expect = 1.5e-195 Identity = 369/516 (71.51%), Postives = 401/516 (77.71%), Query Frame = 0
BLAST of Lcy11g005940 vs. ExPASy TrEMBL
Match: A0A6J1CP13 (uncharacterized protein LOC111012857 OS=Momordica charantia OX=3673 GN=LOC111012857 PE=4 SV=1) HSP 1 Score: 685.3 bits (1767), Expect = 1.8e-193 Identity = 365/510 (71.57%), Postives = 393/510 (77.06%), Query Frame = 0
BLAST of Lcy11g005940 vs. NCBI nr
Match: XP_038874899.1 (uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida] >XP_038874933.1 uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida] >XP_038874965.1 uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida]) HSP 1 Score: 748.8 bits (1932), Expect = 2.7e-212 Identity = 381/453 (84.11%), Postives = 406/453 (89.62%), Query Frame = 0
BLAST of Lcy11g005940 vs. NCBI nr
Match: XP_022922903.1 (uncharacterized protein LOC111430741 [Cucurbita moschata] >XP_022922904.1 uncharacterized protein LOC111430741 [Cucurbita moschata]) HSP 1 Score: 706.8 bits (1823), Expect = 1.2e-199 Identity = 374/514 (72.76%), Postives = 404/514 (78.60%), Query Frame = 0
BLAST of Lcy11g005940 vs. NCBI nr
Match: XP_023551849.1 (uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551850.1 uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 705.7 bits (1820), Expect = 2.6e-199 Identity = 376/510 (73.73%), Postives = 405/510 (79.41%), Query Frame = 0
BLAST of Lcy11g005940 vs. NCBI nr
Match: KAG7015030.1 (hypothetical protein SDJN02_22661, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 701.8 bits (1810), Expect = 3.8e-198 Identity = 372/514 (72.37%), Postives = 401/514 (78.02%), Query Frame = 0
BLAST of Lcy11g005940 vs. NCBI nr
Match: KAG6577008.1 (hypothetical protein SDJN03_24582, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 698.4 bits (1801), Expect = 4.2e-197 Identity = 370/513 (72.12%), Postives = 401/513 (78.17%), Query Frame = 0
BLAST of Lcy11g005940 vs. TAIR 10
Match: AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 8.9e-12 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 0
BLAST of Lcy11g005940 vs. TAIR 10
Match: AT3G15115.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-09 Identity = 72/238 (30.25%), Postives = 110/238 (46.22%), Query Frame = 0
BLAST of Lcy11g005940 vs. TAIR 10
Match: AT1G53180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 7.3e-06 Identity = 72/264 (27.27%), Postives = 116/264 (43.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|