Lcy11g005810 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g005810
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transmembrane protein
Location	Chr11: 5743851 .. 5745822 (-)
RNA-Seq Expression	Lcy11g005810
Synteny	Lcy11g005810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATCTGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCCTTAATGATGTTTTACTCCCATGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCCCATGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGAGTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACCTGGCTATGGCCATATGGAGAGTTTACTTTGAGAGGAAGCTTGAGGATCTTGCCCGAGATTGGCCTCGACAGGCTGTTGGGGATATCACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAACTTCAGGTTCAACTTTTCTTTCAGCTGGCATTATTGTTTAAAATTGTCAATTCTGATTCTGACTCTGCTTCTTAATTATGATGAGTTTGATGGAAATTGATATTGTTTTCACTGCATTTCGCTACCATTTGTGTTCTGAGAATAGGGGGCGTGGGAAGTGAGATAGATGATAGAAATTGAAGATTGATTTGATTGGATTTAGTTAACGAGATTGAGCTTGAATTTGGTTTCTGTTCTGTCTCATAAACAACACATTCATTTGCTCATGCTAGCTATCTTCTGCAAGAGTATGCATTTTCCCTTTCTTTATGGTTAGAATCAAAGCTCAATTCCATGCCTAAACTGAATTTTGGACCATGAATGTGACAATCTGGAGTGGTAAATAGTGCATTAGAGAAAGCATGGACAAGGAGCAACTCATGGTAGGCTTCTAGGCAAAATGACATGAATGAACTGACATGACATAAAGCTGAGAGAGTGATTTTGTGACCGTGGAACTTAGAGCAAGCATGTAAGTGTTGATAAAGCATGTTGAAAGGACTTGTGTTTGTTTGTAGAGGCAACCTTCAATTTCAAAACCATCTCAAGATGCTACATGGTATATTCGGATTGCTAGAGATGTAGGGGAATTGGCAAAGTGGGGCTATCAAAGTATGGAATCTTGGTTTTGGGACTTCACAATTGAGAGTAATTTGTTTGATGGTTATGCTAACATATTTGGTTTCCATATCAGATGGTCGAGTTTAAAGATCTTGAATGACACTAATAATACCAACAAGGTCGCAAGTCCTCAAAATGCTAATAATTTGTCCCATTTCGAATACTTCTTATGACCATCTTATTTGCCTTTTCCTCTGTCTTATCATGTCAATAGCCTAGTACTGGAACCTTGAGTCTCTTTGGTTTACTTCATTTGTAGTTGGAAAAAGAACATCAGAATTCCCTTTAGGCATGTGGGAAAAGACATGATAATTCTGCGAACGGCTTCACTGCGAGTTTGGTTAAAGGACAAGTTGTGAAACTAGATGTCTTTTGAAGCTACAAGATCAAACTATAGTAGGCTATTTTTATGTACGATACTAAAAGTTCTGAGTTTTCGATGCCAAGTGTTATAGGAGTGTTTGTCTCTGTCCTATAAATTGAATAGAAAGACACTTGAGCTAGGTCAAGTATCTTCAGGATATTGTTAGCTTGGAAGCAATGCTTTCATTTCTTTCTATGGCCTTGACTGATTGATGCGAAGACAGAATTTGTTTTTGTTAAATTGATATATATTTGTCCAAATGAAAAATTCATCTGCTTGTTAGAGCGCGAAGGAGCATGAATTTCCCTCTATTTTTTATACTTGTCTTTCATATAGTGGGGGTAGATCCCTTATCCAATTTCTCTCGGTCAGTATTATCGATTCTTTATCTTCCTTAACATATTTTGGTTTGACAGTGAAGTAGAGGAATTCAAACCATAGATAGATTGGTTAAATCAATTGAAGTTTATCTATTGTACTAGTGAATCTTTTCTGGATGGTTTTGGTACTTAT

mRNA sequence

ATGGCATCATCTGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCCTTAATGATGTTTTACTCCCATGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCCCATGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGAGTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACCTGGCTATGGCCATATGGAGAGTTTACTTTGAGAGGAAGCTTGAGGATCTTGCCCGAGATTGGCCTCGACAGGCTGTTGGGGATATCACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAATTGGAAAAAGAACATCAGAATTCCCTTTAGGCATGTGGGAAAAGACATGATAATTCTGCGAACGGCTTCACTGCGAGTTTGGTTAAAGGACAAGTTGTGAAACTAGATGTCTTTTGAAGCTACAAGATCAAACTATAGTAGGCTATTTTTATGTACGATACTAAAAGTTCTGAGTTTTCGATGCCAAGTGTTATAGGAGTGTTTGTCTCTGTCCTATAAATTGAATAGAAAGACACTTGAGCTAGGTCAAGTATCTTCAGGATATTGTTAGCTTGGAAGCAATGCTTTCATTTCTTTCTATGGCCTTGACTGATTGATGCGAAGACAGAATTTGTTTTTGTTAAATTGATATATATTTGTCCAAATGAAAAATTCATCTGCTTGTTAGAGCGCGAAGGAGCATGAATTTCCCTCTATTTTTTATACTTGTCTTTCATATAGTGGGGGTAGATCCCTTATCCAATTTCTCTCGGTCAGTATTATCGATTCTTTATCTTCCTTAACATATTTTGGTTTGACAGTGAAGTAGAGGAATTCAAACCATAGATAGATTGGTTAAATCAATTGAAGTTTATCTATTGTACTAGTGAATCTTTTCTGGATGGTTTTGGTACTTAT

Coding sequence (CDS)

ATGGCATCATCTGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCCTTAATGATGTTTTACTCCCATGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCCCATGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGAGTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACCTGGCTATGGCCATATGGAGAGTTTACTTTGAGAGGAAGCTTGAGGATCTTGCCCGAGATTGGCCTCGACAGGCTGTTGGGGATATCACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAATTGGAAAAAGAACATCAGAATTCCCTTTAGGCATGTGGGAAAAGACATGATAATTCTGCGAACGGCTTCACTGCGAGTTTGGTTAAAGGACAAGTTGTGA

Protein sequence

MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQAVGDITLALSWVFFLVYSWRENWKKNIRIPFRHVGKDMIILRTASLRVWLKDKL

Homology

[Close]

BLAST of Lcy11g005810 vs. ExPASy TrEMBL
Match: A0A1S3C293 (uncharacterized protein LOC103496084 OS=Cucumis melo OX=3656 GN=LOC103496084 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MASSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFLVYSWRE +
Sbjct: 121 VVGDVTLALSWVFFLVYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. ExPASy TrEMBL
Match: A0A6J1FMS5 (uncharacterized protein LOC111446881 OS=Cucurbita moschata OX=3662 GN=LOC111446881 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.6e-72
Identity = 135/143 (94.41%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDS
Sbjct: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFL+YSWRE +
Sbjct: 121 VVGDVTLALSWVFFLMYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. ExPASy TrEMBL
Match: A0A6J1J9R2 (uncharacterized protein LOC111482570 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482570 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 2   ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSF 61
           +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSF
Sbjct: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSF 62

Query: 62  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQA 121
           SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQ 
Sbjct: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122

Query: 122 VGDITLALSWVFFLVYSWRENW 144
           VGD+TLALSWVFFLVYSWRE +
Sbjct: 123 VGDVTLALSWVFFLVYSWREKY 144

[Close]

BLAST of Lcy11g005810 vs. ExPASy TrEMBL
Match: A0A6J1CPH9 (uncharacterized protein LOC111012927 OS=Momordica charantia OX=3673 GN=LOC111012927 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.3e-71
Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SSGFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDS
Sbjct: 1   MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGDITLALSWVFFLVYSWRE +
Sbjct: 121 VVGDITLALSWVFFLVYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. ExPASy TrEMBL
Match: A0A6J1E545 (uncharacterized protein LOC111430823 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430823 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.6e-71
Identity = 133/142 (93.66%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 2   ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSF 61
           +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLI+TSDSF
Sbjct: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSF 62

Query: 62  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQA 121
           SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQ 
Sbjct: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122

Query: 122 VGDITLALSWVFFLVYSWRENW 144
           VGD+TLALSWVFFLVYSWRE +
Sbjct: 123 VGDVTLALSWVFFLVYSWREKY 144

[Close]

BLAST of Lcy11g005810 vs. NCBI nr
Match: XP_008456033.1 (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MASSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFLVYSWRE +
Sbjct: 121 VVGDVTLALSWVFFLVYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. NCBI nr
Match: XP_038875201.1 (uncharacterized protein LOC120067716 [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLA DWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAGDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFLVYSWRE +
Sbjct: 121 VVGDVTLALSWVFFLVYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. NCBI nr
Match: XP_022941561.1 (uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941562.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941563.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941564.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941565.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_023539521.1 uncharacterized protein LOC111800160 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 135/143 (94.41%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDS
Sbjct: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFL+YSWRE +
Sbjct: 121 VVGDVTLALSWVFFLMYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. NCBI nr
Match: XP_022984157.1 (uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >XP_022984158.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >XP_022984159.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >XP_022984160.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >XP_022984161.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >KAG7015017.1 hypothetical protein SDJN02_22648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 2   ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSF 61
           +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSF
Sbjct: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSF 62

Query: 62  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQA 121
           SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQ 
Sbjct: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122

Query: 122 VGDITLALSWVFFLVYSWRENW 144
           VGD+TLALSWVFFLVYSWRE +
Sbjct: 123 VGDVTLALSWVFFLVYSWREKY 144

[Close]

BLAST of Lcy11g005810 vs. NCBI nr
Match: XP_011651290.1 (uncharacterized protein LOC101222658 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.8e-71
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLFTVG LLFMVAFV+DREFQSFFAKGCVLLHL MAIWRVYFERKLEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGLLLFMVAFVRDREFQSFFAKGCVLLHLGMAIWRVYFERKLEDLARDWPRQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
            VGD+TLALSWVFFLVYSWRE +
Sbjct: 121 VVGDVTLALSWVFFLVYSWREKY 143

[Close]

BLAST of Lcy11g005810 vs. TAIR 10
Match: AT1G53035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-50
Identity = 93/143 (65.03%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S S
Sbjct: 7   MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLF +G +LFMV+FVKD+EF SFFA G V+L++ MA+WRV FE K+EDLA +WP+Q
Sbjct: 67  FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
           A+GDI LA+SWVFFLVYSWRE +
Sbjct: 127 ALGDIALAISWVFFLVYSWREKY 149

[Close]

BLAST of Lcy11g005810 vs. TAIR 10
Match: AT3G15358.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53035.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 6.0e-49
Identity = 91/143 (63.64%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 1   MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S S
Sbjct: 1   MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120
           FSGLLLF +G +LFMV+FVKDREF SFFA G V+L++ MA+WRV FE K+EDLA + P+Q
Sbjct: 61  FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

Query: 121 AVGDITLALSWVFFLVYSWRENW 144
           A+GDI LA+SWVFFLVY+WRE +
Sbjct: 121 ALGDIALAVSWVFFLVYTWREKY 143

The following BLAST results are available for this feature:

BLAST of Lcy11g005810 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g005810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C293	2.7e-73	96.50	uncharacterized protein LOC103496084 OS=Cucumis melo OX=3656 GN=LOC103496084 PE=...	[more]
A0A6J1FMS5	8.6e-72	94.41	uncharacterized protein LOC111446881 OS=Cucurbita moschata OX=3662 GN=LOC1114468...	[more]
A0A6J1J9R2	1.1e-71	94.37	uncharacterized protein LOC111482570 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CPH9	3.3e-71	94.41	uncharacterized protein LOC111012927 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1E545	9.6e-71	93.66	uncharacterized protein LOC111430823 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lcy11g005810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456033.1	5.6e-73	96.50	PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]	[more]
XP_038875201.1	1.2e-72	96.50	uncharacterized protein LOC120067716 [Benincasa hispida]	[more]
XP_022941561.1	1.8e-71	94.41	uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941562.1 unchar...	[more]
XP_022984157.1	2.3e-71	94.37	uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima] >XP_022984158...	[more]
XP_011651290.1	6.8e-71	93.71	uncharacterized protein LOC101222658 [Cucumis sativus]	[more]

BLAST of Lcy11g005810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53035.1	2.4e-50	65.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G15358.1	6.0e-49	63.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34274:SF12	PROTEIN, PUTATIVE-RELATED	coord: 1..143
None	No IPR available	PANTHER	PTHR34274	TRANSMEMBRANE PROTEIN	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g005810.1	Lcy11g005810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane