Lcy11g004730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g004730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger SWIM domain-containing protein 7
Location	Chr11: 4573041 .. 4577156 (+)
RNA-Seq Expression	Lcy11g004730
Synteny	Lcy11g004730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTAAACAGAATTAAAAATCAGTACCACAAAAACTTGGTTGTTTCAGACAAAGAATCTCCCTTGGAATGAGCGCGAGTACTCAGGTAGCTGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGGTTGTGGTTTTCATTTGTTTTCCTTCCCTCATCTTCGGATTTTTGTCTTCAAAAAGTAATTGTTTCCTTCTTTTTGTTCTCAATCTGCTGTTAAATTGACGGCGTCTTTGCTGAAAGAAGTTGAAACTGATTTCCGCAGTGACTGATGATCAGCTTTCAGTGTGAGTGTTCTCGATTCTTTCCATTTGGATAAGTTCTTCTTCGTTTTGTTGTGTTCATGGAACTTTGAGGTTGATTGTGTCGGTGCTGGTGCAGCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGAGGGGTGAAGAAAATTTCTGGGGAGCCAAGCAGACGCTCCATCTTTCAGGTTAATTTCTGTATTTTTCATCTTATTTTTCGATCAAATATCGCTTTTAAATTTCCCAAATTGAAGATACTGTTTGGGTTTGCTGGAGTGCCCTAAAATAGAATGTATTTAAGTTCTGTTCTGTTTAAAGCCGCACTGATGAATGGTCTGGAGAATGAAACCATGTTTTTCTCAATCTCTCTAGAGATGGAGAGAGATTTACCCGAAGGTTTAAGAATCTTTTGTATATACTTCTTCATAGTCCCATCATTTTGGGGTTCAAAAACTAGCATGAAACTAAGAAGTTAGGAGAAGGAATGACACTGTAGAAGAGTTTAACCAGCCTAGTGGTCAGTAAGGGCCATGGAAAAAAAAGGGAATGAGTTCAATCTATGATGACCACCCACCTAGGACTTAATATCCTACTAGTTTCCTAGTAACCAAATGTAGTAGGGTTAGACAGTTGTCTCGTGAAATTAGTCGATGTGCGCGCAAGCTGGTCCGAAAACTCATTTTGATATAAAAAAAAAGGACATTGTAGAAGTTTGTTGGTTTGGTAACATATTAACCTGTACACTAAACCTAAAACTTAATATTAAGATTATGAATATGAGATTAAATACATCTATCGGCTTTAAGCTTTTGGATTTAGTCTTAATTTAATAGAGTATCAGAGTCGGCTCTTTGGCTCATAGCACCAATTTTTTTTTTTTTTTTTTCCTTTTTCTTTTATAGGAAACATAAACATAAACCATTTTTCAAAGTGGAACGCTCATCCTATGTCAAGTTTGCTTTGCTATATGGATCAAGATCAACATCAGGCAAACCAAGAGTTTCCCTTTAAATAAAATGGATCCAATGGTTTTAAGAAAACCAACCTCTTTAAACGAAGAAGCTATTCTAACTTCCATGGATTGACTTGGTGGTCATGGTGAATGAGAGTCAATCCAGCTTAGAGGAATGAGTTTAAGTCATGGTGGTCACCTATGTTGGATTAACATCCTATGAGTTTCCTTGGCAACCAAATGTAGTAAGGTTAGATGGTTATCTCATGAGATAATTTGAGTTACGTATAAGTTGGTCCGAACACTCACAAATATTTTTTTTAAAAAAAAAGAAAGGAAAAAAAGGAACTACTTTGTCTCGATAACCATGGACATACATTACACCCACTTTACCTTCGCCTGCTGTGAAAAAAATCTTGCGTTTGAATCTCTATAATATTTTTTCCTCTTCAATTAATATGGGTAGTCAATTAACAAGTCTTTTGCTAATTTTCAAGCTCATAAATAAAAGGGAACGTTAAGAACATGAATAAGAGATTAAGTATTCAGTAGCTAAATTTTTTGTCAAGTGGTTTAATACTCAAGATGATAGATTATGGTTATTTAGGACATGTTTGGGAGTGATTTTAGAAATGGAAAAATCACTTTTGTCATGTCCAAGATCGTTAGAAAGGGTATGAGAAAAGTGATTTTGGCTATTCCAAAATCACTCCCAAACATGCCCTTAATATCCGCTGTATATGTTCTTGACAAGATTTTCTCAAAATCTTTTGACTGGATTATAAAACAGCCAAATCGTTTCCTTTGTTTAGAATGAGTAACAGCTTAAGTACTTTGAGAATCATTCAGAAAATGAGTTCTGTTTTCTTTGAATGTTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCTTGTTATTCTTTCTTCTATGACATTGTGAATAGAGGAGAACAACTTTGTGTAAGAACTAGTTCGTTCTTAATAATATGTAGTGTAGTTGAGATGAAGCTTGAAGAAAATCTTATTCCTTCCACTTCCCAATTATATTTCTTCTCTGCTTCTTTCTTTCTTTTGTAGTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGCATTGAAGTTAAAGTGTCTGATGAAGAGCTGGCAATATTATTGTCCAATCTTTAAGACTATAACGACTTTATCAAAGCCGCAGCTCTCAGCACTCAAAGTTTGAGAGGTAATCAAACCACATAATTGTATGAATACCGACTTTTTCCTGCTGTACTTGAGTAGCTTTTATACCTAATCTTGATGTTAAGCTCATAATGAAACTTGCATAATAATCATTACAACATACTAGGTTTCATTGGTGAGCTGGTAATTCTAACTTGTTTGTCACTCACTAATATGTTAAAATTAGGACAAACCAACCCTGCAATACCCAGAAACCGAACACCTCTCCTCTTCCTTGTTCCTCATTCCTCCTACTATGTTTGTTTTTTCGTCACATGATACTTTCTTTTTTCTTCAGGATCCTGAATATTTGAGGGGAAACCATGAACATAGAGTAGAAAACTCTAAGCAGCAGTACTTATAAAAGGTCTATGTCTTACACTTTGCAGATTGCAAATTTTTCAGTGATGTAGAACTGAAAATATAGATTTTTTGTTTCATCCTCCCATTTGAGATTGAACCAACTTTATTAGATTTGGATTAAATCTTGTTAGAAAATCGACATTTTAGGAAGATCTTGCTAGCCATCGGTTTCTTCATTGTGTAATTTTAATTTAAATTGTTAGTGTTAAAAGAAATGGGTATCTTCTACTGTATAATGTTTGCATTTCCGTAACAGTAGTAGAAGACAAGGAAGATAACTTTATCAGCCTACTTATATAGTTGTATATTTGATTTTAATGATCAAGATATACCTATCAAAGTGTTCCATCAGTTGTGTAAGTTCTTTTTTGTGATAGTTGAAGATTTATATCTATTTCAATATACTTCATAGATAACGATACATACATATTATACATGTTGTGTTTATATTATAAGTTTTTGCTTCTGCTGGCGAGCTGGGCTTCTTTTCTAGACACCCTGTATTCTTTCATTTTTTTTTTGACAGCCTAGTTATTCTGTAAAAAAAGTTATATATGACATTGTAAGTTTCTGATAAGGTTAATCATTGATGTACATGAATATAATAGTTATTGATGATTGTGTTTCATTTGTGTAAGGTATATCATTGATGTATATATCTATTAACATGCTTGCATATTATAACCATAGTCTAAAACATGCTTGCATATTAAGTTTTCATGATAGAGGGATATTGACCCATGGATGTCAATTATTATTCTAGAACTCTGGCACTGATATCAGGATGACCAATTTTTCTCTTGCAAACAGATTTTCTACAAGGAAAGTTTTGGCCATTACCATATGTCAAGTCTGCTGTTACTATTAACATACAGTTCAATTATATTATCAATAATAATGTCCTTATCTGTATAGTTTAAGAGTTGGATTGTTGTGACAGGATTCCTTGTATGGAATTTAAAAGAGTTTGATATGTTCTGATAATAGAATTCTTCGGTGAAGAGGATTATGCTGATGAGAATGACACGTTTGGTTGAAGACAGTTGATTGCTTGTAAGGCTTGAAATATGCTGCTAAGCAGAAGTATGCCACAGAAAGATACTATTTGAGTTAAGAATTTGTTTGTCACATCCCACAAGGGTGGATTTTTTTTTTTTTTTTTTTGAGTTCAACGACATTTGGGGGTAGGAGGATTCAAACCTCTGACCTCTTGGTCGAGACTACATGTCAATTACTGTTAAATTA

mRNA sequence

TTCTTAAACAGAATTAAAAATCAGTACCACAAAAACTTGGTTGTTTCAGACAAAGAATCTCCCTTGGAATGAGCGCGAGTACTCAGGTAGCTGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGAGGGGTGAAGAAAATTTCTGGGGAGCCAAGCAGACGCTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCTTGTTATTCTTTCTTCTATGACATTGTGAATAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGCATTGAAGTTAAAGTGTCTGATGAAGAGCTGGCAATATTATTGTCCAATCTTTAAGACTATAACGACTTTATCAAAGCCGCAGCTCTCAGCACTCAAAGTTTGAGAGGATCCTGAATATTTGAGGGGAAACCATGAACATAGAGTAGAAAACTCTAAGCAGCAGTACTTATAAAAGAATTCTTCGGTGAAGAGGATTATGCTGATGAGAATGACACGTTTGGTTGAAGACAGTTGATTGCTTGTAAGGCTTGAAATATGCTGCTAAGCAGAAGTATGCCACAGAAAGATACTATTTGAGTTAAGAATTTGTTTGTCACATCCCACAAGGGTGGATTTTTTTTTTTTTTTTTTTGAGTTCAACGACATTTGGGGGTAGGAGGATTCAAACCTCTGACCTCTTGGTCGAGACTACATGTCAATTACTGTTAAATTA

Coding sequence (CDS)

ATGAGCGCGAGTACTCAGGTAGCTGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGAGGGGTGAAGAAAATTTCTGGGGAGCCAAGCAGACGCTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCTTGTTATTCTTTCTTCTATGACATTGTGAATAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGCATTGAAGTTAAAGTGTCTGATGAAGAGCTGGCAATATTATTGTCCAATCTTTAA

Protein sequence

MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKVSDEELAILLSNL

Homology

[Close]

BLAST of Lcy11g004730 vs. ExPASy TrEMBL
Match: A0A6J1J6W2 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481893 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST VAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISGEPS RS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. ExPASy TrEMBL
Match: A0A6J1FSJ7 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447762 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISGEPS RS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. ExPASy TrEMBL
Match: A0A1S3BZP2 (zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103494794 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAS  VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKISG PSRRS
Sbjct: 1   MSASIVVAEAVWKRIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. ExPASy TrEMBL
Match: A0A0A0KWG5 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAS  VAEAVWKQIESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKISG PS RS
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. ExPASy TrEMBL
Match: A0A6J1D5Z4 (zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111017621 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61
Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAS  VAEAVWKQI+STRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKI GEPS RS
Sbjct: 1   MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCCKHQLAARLAASLGA IE KV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCCKHQLAARLAASLGAFIEAKV 120

Query: 121 SDEELAILLSNL 133
           SDEELA+LLSNL
Sbjct: 121 SDEELALLLSNL 132

[Close]

BLAST of Lcy11g004730 vs. NCBI nr
Match: XP_022983272.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983279.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983286.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 3.6e-64
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST VAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISGEPS RS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. NCBI nr
Match: XP_022942858.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP_022942859.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 4.0e-63
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISGEPS RS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. NCBI nr
Match: XP_008454376.1 (PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63
Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAS  VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKISG PSRRS
Sbjct: 1   MSASIVVAEAVWKRIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. NCBI nr
Match: KAG7030956.1 (Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISGEPS RS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           +FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  VFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. NCBI nr
Match: KAG6600296.1 (Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.4 bits (638), Expect = 8.8e-63
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKISG+PS RS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGDPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]

BLAST of Lcy11g004730 vs. TAIR 10
Match: AT4G33925.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 187.6 bits (475), Expect = 6.5e-48
Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           M+ +  VA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKISG PS RS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++V
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIEV 120

Query: 121 SDEELAILLSNL 133
           SD+ LA++LS +
Sbjct: 121 SDDHLALMLSKI 132

[Close]

BLAST of Lcy11g004730 vs. TAIR 10
Match: AT4G33925.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 174.1 bits (440), Expect = 7.5e-44
Identity = 81/119 (68.07%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 1   MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRS 60
           M+ +  VA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKISG PS RS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVK 120
           IFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIE 119

The following BLAST results are available for this feature:

BLAST of Lcy11g004730 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g004730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6W2	1.7e-64	96.21	zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1FSJ7	1.9e-63	95.45	zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX...	[more]
A0A1S3BZP2	2.5e-63	94.70	zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0KWG5	2.1e-62	93.94	SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 P...	[more]
A0A6J1D5Z4	2.3e-61	93.18	zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Lcy11g004730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983272.1	3.6e-64	96.21	zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_0...	[more]
XP_022942858.1	4.0e-63	95.45	zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP...	[more]
XP_008454376.1	5.2e-63	94.70	PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]	[more]
KAG7030956.1	5.2e-63	94.70	Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argy...	[more]
KAG6600296.1	8.8e-63	94.70	Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma su...	[more]

BLAST of Lcy11g004730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33925.1	6.5e-48	66.67	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT4G33925.2	7.5e-44	68.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28498	ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7	coord: 2..131
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 62..111 score: 8.159615

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g004730.1	Lcy11g004730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
cellular_component	GO:0097196	Shu complex
molecular_function	GO:0008270	zinc ion binding