Lcy11g004520 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g004520
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 4422840 .. 4423315 (+)
RNA-Seq Expression	Lcy11g004520
Synteny	Lcy11g004520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAGCTTGGGAGAGGAAAGAACAGAAAGAAAATGGAGAGCAAGAAGACTATCGGTTCGGTGGTGATGGTGGTGGTGATGATGTTTATGATCGCTACACTGGCGGACACCGCCACGTCGACCGAGAACGTGGCGGTTGGATCGGTGGCGGACGGCGGCGTCCATACTTTTTCAAGGAAAATTATACTGAAAAATGGAGGAAATGGAGTCTGTCTTGTGACTGGTCGGCCTTGCAAATTTCACAGCGACTGCCCTTCCGACTGTGCTTGCTACACCGCCGGTCACTGTGGAGATTGGGTCTAAAATTACTATGTTTGTTGTGTTCTTTCTCTGTCTTTTCCTTTAATTTCTTGGTCTTTTGCCAAAATAAATCTCTCACTTTGTTAATTTCTGTATCATCTCTCTCTCATTGAGACTTTGGTGATGTTGAACCAATTAATGTAACAAATTAAAGCTTATATAGTTGCATAAATGGG

mRNA sequence

AAAGAGCTTGGGAGAGGAAAGAACAGAAAGAAAATGGAGAGCAAGAAGACTATCGGTTCGGTGGTGATGGTGGTGGTGATGATGTTTATGATCGCTACACTGGCGGACACCGCCACGTCGACCGAGAACGTGGCGGTTGGATCGGTGGCGGACGGCGGCGTCCATACTTTTTCAAGGAAAATTATACTGAAAAATGGAGGAAATGGAGTCTGTCTTGTGACTGGTCGGCCTTGCAAATTTCACAGCGACTGCCCTTCCGACTGTGCTTGCTACACCGCCGGTCACTGTGGAGATTGGGTCTAAAATTACTATGTTTGTTGTGTTCTTTCTCTGTCTTTTCCTTTAATTTCTTGGTCTTTTGCCAAAATAAATCTCTCACTTTGTTAATTTCTGTATCATCTCTCTCTCATTGAGACTTTGGTGATGTTGAACCAATTAATGTAACAAATTAAAGCTTATATAGTTGCATAAATGGG

Coding sequence (CDS)

ATGGAGAGCAAGAAGACTATCGGTTCGGTGGTGATGGTGGTGGTGATGATGTTTATGATCGCTACACTGGCGGACACCGCCACGTCGACCGAGAACGTGGCGGTTGGATCGGTGGCGGACGGCGGCGTCCATACTTTTTCAAGGAAAATTATACTGAAAAATGGAGGAAATGGAGTCTGTCTTGTGACTGGTCGGCCTTGCAAATTTCACAGCGACTGCCCTTCCGACTGTGCTTGCTACACCGCCGGTCACTGTGGAGATTGGGTCTAA

Protein sequence

MESKKTIGSVVMVVVMMFMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGGNGVCLVTGRPCKFHSDCPSDCACYTAGHCGDWV

Homology

[Close]

BLAST of Lcy11g004520 vs. ExPASy TrEMBL
Match: A0A0A0KT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.1e-25
Identity = 65/93 (69.89%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 1  MES-KKTIGSVVMVVVMM--FMIATLADTAT-STENVAVGSVADGGVHTFSRKIILKNGG 60
          MES KK+I +V  VVV+M  FMIATLAD+AT +TENVA G + DGG H F RK ++KNG 
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

Query: 61 NGVCLVTGRPCKFHSDCPSDCACYTAGHCGDWV 90
          NGVCLV G+ CK H DCPSDCACYTAGHCGDWV
Sbjct: 61 NGVCLVKGKACKSHKDCPSDCACYTAGHCGDWV 93

[Close]

BLAST of Lcy11g004520 vs. ExPASy TrEMBL
Match: A0A5D3E009 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00630 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 65/94 (69.15%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 1  MESKK--TIGSVVMVVVMM--FMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGG 60
          MESKK  T  SV  VVVMM  FMIATLAD+  +TENVA G+V +GG H F RK I+KNG 
Sbjct: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60

Query: 61 -NGVCLVTGRPCKFHSDCPSDCACYTAGHCGDWV 90
           NGVCLV G+ CK H DCPS+CACYTAGHCGDWV
Sbjct: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWV 94

[Close]

BLAST of Lcy11g004520 vs. ExPASy TrEMBL
Match: A0A5D3E0N0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00620 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.5e-08
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 5  KTIGSVVMVVVMMFMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGGNGVCLVTG 64
          + IG+   ++VMM +IAT+ ++A+ TE +           +F RK++    GNGVC +TG
Sbjct: 6  RNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGVCPITG 65

Query: 65 RPCKFHSDC---PSDCACYTAGHCGDWV 90
           PC     C      CACYTAGHCGD+V
Sbjct: 66 WPCNPAYGCGPFSDSCACYTAGHCGDFV 93

[Close]

BLAST of Lcy11g004520 vs. ExPASy TrEMBL
Match: A0A0A0KWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.8e-07
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 5  KTIG-SVVMVVVMMFMIATLADTATSTENVAVGSVADG--GVHTFSRKIILKNGGNGVCL 64
          K IG +V  ++VMM +IAT+ ++A+ TE + +  +        +F RK++    GNGVC 
Sbjct: 6  KNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKGNGVCP 65

Query: 65 VTGRPCK-FHSDC---PSDCACYTAGHCGDWV 90
          + GRPC   +  C      CACYTAGHCGD+V
Sbjct: 66 IIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

[Close]

BLAST of Lcy11g004520 vs. ExPASy TrEMBL
Match: A0A5D3E254 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00610 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 5  KTIGSVVMVVVMMFMIATLADTATS-TENVAVGSVAD-GGVHTFSRKIILKNGGNGVCLV 64
          K +G+   ++VMM +IAT+ ++A S TE   +  V D     +F RK++    GNGVC +
Sbjct: 3  KNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVCPI 62

Query: 65 TGRPCKFHSDC---PSDCACYTAGHCGDWV 90
           G PC     C      CACYT+G+CGD+V
Sbjct: 63 RGWPCIPAFGCGPLSGVCACYTSGYCGDYV 92

[Close]

BLAST of Lcy11g004520 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_014543 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 8.4e-25
Identity = 65/93 (69.89%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 1  MES-KKTIGSVVMVVVMM--FMIATLADTAT-STENVAVGSVADGGVHTFSRKIILKNGG 60
          MES KK+I +V  VVV+M  FMIATLAD+AT +TENVA G + DGG H F RK ++KNG 
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

Query: 61 NGVCLVTGRPCKFHSDCPSDCACYTAGHCGDWV 90
          NGVCLV G+ CK H DCPSDCACYTAGHCGDWV
Sbjct: 61 NGVCLVKGKACKSHKDCPSDCACYTAGHCGDWV 93

[Close]

BLAST of Lcy11g004520 vs. NCBI nr
Match: KAA0044338.1 (hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467.1 hypothetical protein E5676_scaffold655G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-23
Identity = 65/94 (69.15%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 1  MESKK--TIGSVVMVVVMM--FMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGG 60
          MESKK  T  SV  VVVMM  FMIATLAD+  +TENVA G+V +GG H F RK I+KNG 
Sbjct: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60

Query: 61 -NGVCLVTGRPCKFHSDCPSDCACYTAGHCGDWV 90
           NGVCLV G+ CK H DCPS+CACYTAGHCGDWV
Sbjct: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWV 94

[Close]

BLAST of Lcy11g004520 vs. NCBI nr
Match: KAG6576916.1 (hypothetical protein SDJN03_24490, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-09
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MESK-KTIGSVVMVVVMMFMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGGNGV 60
          ME K K  G VV+++V M M+ATLAD+A          VA+GG   F  KI+LK+ G+  
Sbjct: 1  MEMKMKNTGLVVVMMVTMIMMATLADSA----------VAEGG--GFRSKILLKSEGSSE 60

Query: 61 CLVTGRPCKFHSDCPSDCACYTAGHCGDWV 90
          C  T   C+ H DCP +CACYTAGHCGD+V
Sbjct: 61 C-PTYLSCETHEDCPFNCACYTAGHCGDFV 77

[Close]

BLAST of Lcy11g004520 vs. NCBI nr
Match: KAA0044337.1 (hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466.1 hypothetical protein E5676_scaffold655G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 9.3e-08
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 5  KTIGSVVMVVVMMFMIATLADTATSTENVAVGSVADGGVHTFSRKIILKNGGNGVCLVTG 64
          + IG+   ++VMM +IAT+ ++A+ TE +           +F RK++    GNGVC +TG
Sbjct: 6  RNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGVCPITG 65

Query: 65 RPCKFHSDC---PSDCACYTAGHCGDWV 90
           PC     C      CACYTAGHCGD+V
Sbjct: 66 WPCNPAYGCGPFSDSCACYTAGHCGDFV 93

[Close]

BLAST of Lcy11g004520 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_014579 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 7.9e-07
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 5  KTIG-SVVMVVVMMFMIATLADTATSTENVAVGSVADG--GVHTFSRKIILKNGGNGVCL 64
          K IG +V  ++VMM +IAT+ ++A+ TE + +  +        +F RK++    GNGVC 
Sbjct: 6  KNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKGNGVCP 65

Query: 65 VTGRPCK-FHSDC---PSDCACYTAGHCGDWV 90
          + GRPC   +  C      CACYTAGHCGD+V
Sbjct: 66 IIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

The following BLAST results are available for this feature:

BLAST of Lcy11g004520 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g004520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT53	4.1e-25	69.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1	[more]
A0A5D3E009	1.3e-23	69.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E0N0	4.5e-08	40.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KWE4	3.8e-07	41.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1	[more]
A0A5D3E254	1.6e-05	40.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy11g004520 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52763.1	8.4e-25	69.89	hypothetical protein Csa_014543 [Cucumis sativus]	[more]
KAA0044338.1	2.7e-23	69.15	hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467...	[more]
KAG6576916.1	6.4e-09	50.00	hypothetical protein SDJN03_24490, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0044337.1	9.3e-08	40.91	hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466...	[more]
KGN52762.1	7.9e-07	41.30	hypothetical protein Csa_014579 [Cucumis sativus]	[more]

BLAST of Lcy11g004520 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011052	Proteinase/amylase inhibitor domain superfamily	SUPERFAMILY	57027	Plant inhibitors of proteinases and amylases	coord: 57..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g004520.1	Lcy11g004520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0004866	endopeptidase inhibitor activity