Lcy11g004310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g004310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	Chr11: 4174637 .. 4176622 (+)
RNA-Seq Expression	Lcy11g004310
Synteny	Lcy11g004310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATCGTAGACCCCTCGTAAACTCCTTAATTAATTAAAAATTAACTCAAATTACGAAAACTGATTAGAGATAAGCCTTCCTGGATTAGCAGCAAACAAACACAACCTTCTCTCTCGGTAATCTCAACTCTTCTTTTTGTATTATATATTTAAATCCTTCACATCCCACTCTTCTTCTCTGTCCATCGCTATACCTTCGCTGTCTTCTCCTTTGACTCTTTCTCCTCTCTTCAGTTTGCTTCTTGTTTCTCTGAATTCCGGCCGGTTTCGTCGTCGTCGTCGTCGTTCGCCGGAGAACGGGATTGATTGGTTTCGGTGTGTGTTGGAAGGGGGATCTGTGGTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGGGTGCCTCCGCCTCAAGGTATGTTTCGATGTTTCTTTTGTGTTTTTGGTGTTTTGGAGTTGGATCGGAGGGTTTTGCGGTGTGCGATTGTAGATCTGTGTGTGTTTTGTGTTGATTTAGGGTTTTGGTGTTGGTTTTTTTTTTTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAAGGATATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCCCAACAGCAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAAATTTCTCTATCTCCCTCCCTCTCTTGATTTCTCTTTCTTTTCTGTCCATGGCTGTTGAAATCGGATCTGAACTGAATCGGATTCCGACGGTTTGGTATCGGAAACCGAGTTCAGAGCGAGTCAATGGCGTTGTCTAGTAAATCGCGCTGCCTCGTTTTCATCGGAGACGATTTTCTTGGAAATATCGCCTCGATGAAATCCCCAAATTGACCCCCATTCGCCTCTATATTACAGTTTTTAATCTATTTTTTAAAAATTTGCATAATTGCGAAAAACCACCTAACTTTTTTTAATTTCATCATCCAGCCCCTTGGACTTGTGAAATTTTACAAAATGCACAAACCACCTGAAAGATCATTACAAATATATGTATATATATTTTAATTTTAAATTAAGAACATTAACCATTAGAAAATTACAGTTTCTCCAGATCAATATTGAGCTATCTGTCGTCTCAATTTAGGAAAACAAATAAATTAGCCTAAAGAATCCTAAATAATTTAGGTTTGATTGTAACAATTCTACGATTTTAGGGTTTGATCCTAACAAATTGTCTATTTAGATCAAAACAAAATTTTTCATTGATCTTTTCAATTAACACTTAATGTTTTCAATTTTAAGAAACTGCAAAAATCACTCCTAAATCTGTCTAGGATTAGCTTAATTGATGATCAAATCGAATGTTCTAACATTTAGCAGTAAATTTTGCAATTTCTTCTTATATTTGATAACTCATTTATTTCTGGAGAATTTTGTACTGAATTTGAGTTTGATTTGGGACTCTGCAGTTTGGCTGCGCTGTGCTGTTGCTGTCTTCTCGACGCCTGCTTTTAAAGAGAATCCATTTGCAATGTGCTGTGCTTCAAATTCAAGGGCAATTTCTCAGAGAACTTTTCCCTGAAACAAAAACGAAAAAAAAAAGAAATTGAAAAACAATTGAGTTGTTGATGATTTGGGCCTTTCATTGTGAAGTTTTAAATTCTTGCGTTTTATTATGATATAGTCTAGTCAGTGCTTGTTCTTCGTTTCCTCCTCTCTCTCTCTCTCTACATTTTTCTTATATAAATAATACCTTCTCTCTCTACCCTCTTTTTCTTTCTCTCTCTACTGGTTTGCTTTGAAAACCCACATTTTTCTGCTCGTACCATTGATGGGTTTCTTGAGGTATGATTCTAAATGAACTGATTTTTTGTTGTTTGTTTAAAGGAAGACTATAATTTGTGAAATTTGAATTAAAATGTACGAATTGATTGTTCA

mRNA sequence

CAAAATCGTAGACCCCTCGTAAACTCCTTAATTAATTAAAAATTAACTCAAATTACGAAAACTGATTAGAGATAAGCCTTCCTGGATTAGCAGCAAACAAACACAACCTTCTCTCTCGGTAATCTCAACTCTTCTTTTTGTATTATATATTTAAATCCTTCACATCCCACTCTTCTTCTCTGTCCATCGCTATACCTTCGCTGTCTTCTCCTTTGACTCTTTCTCCTCTCTTCAGTTTGCTTCTTGTTTCTCTGAATTCCGGCCGGTTTCGTCGTCGTCGTCGTCGTTCGCCGGAGAACGGGATTGATTGGTTTCGGTGTGTGTTGGAAGGGGGATCTGTGGTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGGGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAAGGATATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCCCAACAGCAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGTCTTCTCGACGCCTGCTTTTAAAGAGAATCCATTTGCAATGTGCTGTGCTTCAAATTCAAGGGCAATTTCTCAGAGAACTTTTCCCTGAAACAAAAACGAAAAAAAAAAGAAATTGAAAAACAATTGAGTTGTTGATGATTTGGGCCTTTCATTGTGAAGTTTTAAATTCTTGCGTTTTATTATGATATAGTCTAGTCAGTGCTTGTTCTTCGTTTCCTCCTCTCTCTCTCTCTCTACATTTTTCTTATATAAATAATACCTTCTCTCTCTACCCTCTTTTTCTTTCTCTCTCTACTGGTTTGCTTTGAAAACCCACATTTTTCTGCTCGTACCATTGATGGGTTTCTTGAGGTATGATTCTAAATGAACTGATTTTTTGTTGTTTGTTTAAAGGAAGACTATAATTTGTGAAATTTGAATTAAAATGTACGAATTGATTGTTCA

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGGGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAAGGATATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCCCAACAGCAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGTCTTCTCGACGCCTGCTTTTAA

Protein sequence

MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF

Homology

[Close]

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-31
Identity = 75/100 (75.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYP 60
          MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYP
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-20
Identity = 61/91 (67.03%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 4  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQ 63
          Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY Q
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQ 61

Query: 64 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
           P Q+Q +   G LEGCLAALCCCCLLDACF
Sbjct: 62 APQQKQNA---GMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 61/100 (61.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 5   NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPP-----GAYPPQGYPPPYAPQ 64
           +Q  P +GVPP   YP EG PKDAYPPPG  YP QGYPPP       YPPQGYPP   P+
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65  YGQP----PPQQQQSS--GPGCLEGCLAALCCCCLLDACF 92
            G P    PPQQQQ     PG LEGC+AALCC C+LDACF
Sbjct: 62  QGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07
Identity = 38/60 (63.33%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 1   MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPP--GAYPPQGYPPPYAPQ 58
           M       PP G  PPPQGYPP+GYP   YPP GYPPQGYPPP  GA PPQG PP   PQ
Sbjct: 381 MQQQQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPPQGYPPPPQGA-PPQGAPPAAPPQ 439

[Close]

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot
Match: A5PLE2 (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=7955 GN=cystm1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.4e-07
Identity = 50/114 (43.86%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 5   NQGQPP--IGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG----AYPPQGY-------P 64
           N  QPP   G  P  GYP +GYP   YP  GYP QGYPP G     YP QGY       P
Sbjct: 2   NYEQPPAYTGPGPAPGYPAQGYPAQGYPTQGYPAQGYPPQGYPAQGYPAQGYPNYPPGPP 61

Query: 65  PPYAPQ-----YGQPPP------------QQQQSSGPGCLEGCLAALCCCCLLD 89
            PY  Q     Y QP P            +  QS    CL  C AALCCCCL D
Sbjct: 62  GPYTAQPGYQGYPQPGPPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL
Match: A0A0A0KWC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-43
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPPQQQ SSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL
Match: A0A1S3BZB4 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103494821 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.3e-42
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPP QQQSSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL
Match: A0A6J1D5E9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111017767 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.6e-39
Identity = 88/96 (91.67%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYA 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYA
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYA 60

Query: 61 PQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PQYGQPPP QQQSSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF 95

[Close]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL
Match: A0A6J1J7A9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111483235 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38
Identity = 85/101 (84.16%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDA----------YPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPPQGYPPEGYPKDA          YPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
           PPPYAPQYGQPPP QQQSS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 101

[Close]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL
Match: A0A6J1JI08 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111485962 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.3e-38
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPPQQQQ+SGPGC+EGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 86

[Close]

BLAST of Lcy11g004310 vs. NCBI nr
Match: XP_011652909.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN52747.1 hypothetical protein Csa_015060 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPPQQQ SSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Lcy11g004310 vs. NCBI nr
Match: XP_008454408.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-41
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPP QQQSSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of Lcy11g004310 vs. NCBI nr
Match: XP_038905303.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 87/91 (95.60%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPP GYPPPYAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPPGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
           PPQQQ SSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 APPQQQSSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Lcy11g004310 vs. NCBI nr
Match: XP_022149329.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia] >XP_022149330.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 88/96 (91.67%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYA 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYA
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYA 60

Query: 61 PQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PQYGQPPP QQQSSGPGCLEGCLAALCCCCLLDACF
Sbjct: 61 PQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF 95

[Close]

BLAST of Lcy11g004310 vs. NCBI nr
Match: XP_023551906.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 4.0e-38
Identity = 86/101 (85.15%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDA----------YPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ PIGVPPPQGYPPEGYPKDA          YPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQAPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
           PPPYAPQYGQPPP QQQSS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 101

[Close]

BLAST of Lcy11g004310 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 75/100 (75.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYP 60
          MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYP
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPQYGQPPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
          PPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Lcy11g004310 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-21
Identity = 61/91 (67.03%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 4  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQ 63
          Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY Q
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQ 61

Query: 64 PPPQQQQSSGPGCLEGCLAALCCCCLLDACF 92
           P Q+Q +   G LEGCLAALCCCCLLDACF
Sbjct: 62 APQQKQNA---GMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Lcy11g004310 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 58/122 (47.54%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 4   YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYP 63
           Y   Q P+  PPPQGYPP EGYP   YPPP           GYPP GYPPP       YP
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  PQGYPPPYAPQ---------------YGQPPP--QQQQSSGPGCLEGCLAALCCCCLLDA 92
            QGYPPP  PQ               YGQ PP  ++ +    G +EGCLA LCCC LL+A
Sbjct: 63  AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEA 122

[Close]

BLAST of Lcy11g004310 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 7  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPP 64
          G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP YG  P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGGYPP--APGYGGYP 72

[Close]

BLAST of Lcy11g004310 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 7  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPP 64
          G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP YG  P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGGYPP--APGYGGYP 72

The following BLAST results are available for this feature:

BLAST of Lcy11g004310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	3.7e-31	75.00	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	1.7e-20	67.03	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	2.1e-18	61.00	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
P31356	1.7e-07	63.33	Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2	[more]
A5PLE2	8.4e-07	43.86	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=79...	[more]

BLAST of Lcy11g004310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC5	3.4e-43	97.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1	[more]
A0A1S3BZB4	8.3e-42	97.80	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A6J1D5E9	8.6e-39	91.67	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]
A0A6J1J7A9	2.5e-38	84.16	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1JI08	4.3e-38	89.01	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]

BLAST of Lcy11g004310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652909.1	7.0e-43	97.80	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]
XP_008454408.1	1.7e-41	97.80	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_038905303.1	2.9e-41	95.60	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]
XP_022149329.1	1.8e-38	91.67	cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica c...	[more]
XP_023551906.1	4.0e-38	85.15	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita p...	[more]

BLAST of Lcy11g004310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	2.7e-32	75.00	proline-rich family protein	[more]
AT5G67600.1	1.2e-21	67.03	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	2.3e-15	47.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G45350.1	2.7e-08	63.93	proline-rich family protein	[more]
AT5G45350.2	2.7e-08	63.93	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 15..26 score: 77.78 coord: 28..40 score: 44.87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR31568:SF83	UV-INDUCED PROTEIN UVI15-RELATED	coord: 1..91
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 46..91 e-value: 8.1E-12 score: 45.2
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g004310.1	Lcy11g004310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane