Lcy11g004270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g004270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Cyclin-dependent kinase
Location	Chr11: 4108009 .. 4108203 (+)
RNA-Seq Expression	Lcy11g004270
Synteny	Lcy11g004270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCAGCTCGGCAATTTGGTGGAATCCATAAAATCCAAGGTGAAGGCGCTGAAGAAGTCGAAGAAGCCTTACATAAAGATGGACAAGAGCTCCAGCGTCAAGGTTGAGATCCGTAGCCGAAAAGCTCGATCGTTGATTGATAAGACCTTGAAGGTCGCCGATCGTCCTGGCAAGCGTACCATTTCTTAG

mRNA sequence

ATGGCGAATCAGCTCGGCAATTTGGTGGAATCCATAAAATCCAAGGTGAAGGCGCTGAAGAAGTCGAAGAAGCCTTACATAAAGATGGACAAGAGCTCCAGCGTCAAGGTTGAGATCCGTAGCCGAAAAGCTCGATCGTTGATTGATAAGACCTTGAAGGTCGCCGATCGTCCTGGCAAGCGTACCATTTCTTAG

Coding sequence (CDS)

ATGGCGAATCAGCTCGGCAATTTGGTGGAATCCATAAAATCCAAGGTGAAGGCGCTGAAGAAGTCGAAGAAGCCTTACATAAAGATGGACAAGAGCTCCAGCGTCAAGGTTGAGATCCGTAGCCGAAAAGCTCGATCGTTGATTGATAAGACCTTGAAGGTCGCCGATCGTCCTGGCAAGCGTACCATTTCTTAG

Protein sequence

MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGKRTIS

Homology

[Close]

BLAST of Lcy11g004270 vs. ExPASy TrEMBL
Match: A0A5D3E160 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00420 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. ExPASy TrEMBL
Match: E5GBH1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. ExPASy TrEMBL
Match: A0A1S3BZS5 (uncharacterized protein LOC103494825 OS=Cucumis melo OX=3656 GN=LOC103494825 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. ExPASy TrEMBL
Match: A0A6J1D650 (uncharacterized protein LOC111017632 OS=Momordica charantia OX=3673 GN=LOC111017632 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.8e-22
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPY+KMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYVKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. ExPASy TrEMBL
Match: A0A0A0KT27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000640 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKT+KVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARFLIDKTMKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. NCBI nr
Match: XP_008454414.1 (PREDICTED: uncharacterized protein LOC103494825 [Cucumis melo] >ADN33813.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0044321.1 uncharacterized protein E6C27_scaffold46G00430 [Cucumis melo var. makuwa] >TYK29449.1 uncharacterized protein E5676_scaffold655G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-21
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. NCBI nr
Match: XP_022149139.1 (uncharacterized protein LOC111017632 [Momordica charantia] >XP_022149140.1 uncharacterized protein LOC111017632 [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPY+KMDKSSSVKVEIRSRKAR LIDKTLKVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYVKMDKSSSVKVEIRSRKARLLIDKTLKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. NCBI nr
Match: XP_004150261.1 (uncharacterized protein LOC101219359 [Cucumis sativus] >KGN52743.1 hypothetical protein Csa_014765 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKT+KVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARFLIDKTMKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. NCBI nr
Match: XP_038905309.1 (uncharacterized protein LOC120091380 [Benincasa hispida])

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKT+KVADRPGK
Sbjct: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTMKVADRPGK 60

Query: 61 RTIS 65
          RTIS
Sbjct: 61 RTIS 64

[Close]

BLAST of Lcy11g004270 vs. NCBI nr
Match: XP_022922964.1 (uncharacterized protein LOC111430789 [Cucurbita moschata] >XP_023553058.1 uncharacterized protein LOC111810569 [Cucurbita pepo subsp. pepo] >KAG7014932.1 hypothetical protein SDJN02_22563, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 3.4e-20
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          MANQ G+LVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKAR LIDKT+KVADRPGK
Sbjct: 1  MANQFGSLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARLLIDKTMKVADRPGK 60

Query: 61 RTIS 65
          RT+S
Sbjct: 61 RTVS 64

[Close]

BLAST of Lcy11g004270 vs. TAIR 10
Match: AT3G19660.1 (unknown protein; Has 16 Blast hits to 16 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-16
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1  MANQLGNLVESIKSKVKALKKSKKPYIKMDKSSSVKVEIRSRKARSLIDKTLKVADRPGK 60
          M  QL +L+E+IKSKV  L+K KK YIKMDKSSSV+V IR +K R LIDKTLKVADRPGK
Sbjct: 1  MGLQLESLMETIKSKVSLLRKKKKTYIKMDKSSSVRVAIRRKKTRDLIDKTLKVADRPGK 60

Query: 61 RTI 64
          RT+
Sbjct: 61 RTL 63

The following BLAST results are available for this feature:

BLAST of Lcy11g004270 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g004270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E160	6.7e-22	98.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GBH1	6.7e-22	98.44	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BZS5	6.7e-22	98.44	uncharacterized protein LOC103494825 OS=Cucumis melo OX=3656 GN=LOC103494825 PE=...	[more]
A0A6J1D650	8.8e-22	96.88	uncharacterized protein LOC111017632 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A0A0KT27	1.1e-21	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000640 PE=4 SV=1	[more]

BLAST of Lcy11g004270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454414.1	1.4e-21	98.44	PREDICTED: uncharacterized protein LOC103494825 [Cucumis melo] >ADN33813.1 hypot...	[more]
XP_022149139.1	1.8e-21	96.88	uncharacterized protein LOC111017632 [Momordica charantia] >XP_022149140.1 uncha...	[more]
XP_004150261.1	2.4e-21	96.88	uncharacterized protein LOC101219359 [Cucumis sativus] >KGN52743.1 hypothetical ...	[more]
XP_038905309.1	2.4e-21	96.88	uncharacterized protein LOC120091380 [Benincasa hispida]	[more]
XP_022922964.1	3.4e-20	92.19	uncharacterized protein LOC111430789 [Cucurbita moschata] >XP_023553058.1 unchar...	[more]

BLAST of Lcy11g004270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19660.1	4.2e-16	71.43	unknown protein; Has 16 Blast hits to 16 proteins in 6 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34563:SF12	SUBFAMILY NOT NAMED	coord: 1..64
None	No IPR available	PANTHER	PTHR34563	BNACNNG33880D PROTEIN	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g004270.1	Lcy11g004270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity