Lcy11g004210 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g004210
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Tubulin alpha chain
Location	Chr11: 4054033 .. 4059571 (+)
RNA-Seq Expression	Lcy11g004210
Synteny	Lcy11g004210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCCACAATCCAAACATCCCTTAATGAAATGCCCCTTGTGGAACTCTCTACACCAAGTGTATTCAATCATTGCCATCCCCACACATACCTCTCTTCTCTCACTCCTCTTTTAACTCCATTTGAAGCCACAAGCAAAATCCCATGTGGGCCCTCACCTGGGCACGTTAGCATTCAATCCCATGTTTCGCTAAAGTGCGCCTCGGCTGATGCGTCTACGCTTTAATCGCTAAATTGCGTTTCAATTTCCATTTCATTTTTGTTTTTGTTCTTTTTGAAAAACTTAAAATGAAACTATTTCTTCTCCCTTTGAATTCCTTGGGAGGAAGGAAGCTCTAGCTCCTCTACCTATGGCTGCTCTGCAAATTCTCAAATCGACCGTCTCTCCTCTTTCGATCTCTCGGCCGAAATTTGGCGTCCAGTCGAGCCGGTTCTTCTCGGAGTCGGATTCCACGAGGAGGTTTGTACGGTTTCATGGCCGTCGGAGGAGCTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGTTAGTTTTCTTCTGATTCTGCTTCTTGCGGTCTTGTTTTTGTTCTGTGTTTTTCTTTCTCAGTGCATTTGCGTTGCTTTGCTTGGATCTTCTCGATGGATTGATGTTCGTTATCGTGGACTTCATCCTGCTTATTCTGAAAGCGAGAGACAGAGATTAAACTAACTAGCTATTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGGTCTGTCACTCTCACTCGTGAATTATCCTGCTCTGTTGACAATCATGCGAGCATTCATCCGGCTACTCTTCTGTTACTTCTGGATTATCTTTCTCAATGCATGGTGTAATATGTTGTTCAGATGGTCCGTCACTTCTGAATTGTCTTGTTCTGTTGACAGTAGCTCAATCATGTAGCAAAATTGTGCAAGAGGAGATCCATCCAGCTATTCGTCCGTCATTTCTTAATTCTCTTTCTCAGTGCATTGGCTTCGTTCGGATGTCTTGATGAATTGATGTTTGTTATAGTAGACATCGTATTGGTTATTTCCGAAGTAAGAAAATGCACCGACAGAGATAATTCGGGAATAACGGAAGAATAGTTGGATGGATCTCGTATGATTTTGCTACATGATTGTGCTACGATACAACAGAGCAAGATCGTAGATGTTCATTATCGTAAACTTCATTCTGCTTATTTTCAAGGCAAGACTTAGAGAGGCAACTAACTTGCTTTGAAGAGGCAGAAGTTGCATGGTGTAATTATCTTGCTCTGTAGACAGTAACACAATTGTGTAGCAAAATCGTGCGAGTATCCGTCAAGCTGTTTGAGTAATTGACGAATGGAAGATGCTGGGCGACCAATAAAGATTACTTAGTTGGCACTCCGTTTCTTTTTAGAGCTTTATTCTTGAGTCAATATAGGCACAGCCGTAAATTTCAGCTAAAAATTTTGATTATGTTTAACATTTTTTTAAAAAAAATTGTTGAGATGATAAACCAAAAAATTTTGTAGCCGGAGAACACTTGGTAAGACGGATAAAACCATCATTCCTATCAGTATCTGTATTAACCATCAGTTCATTACCTGAATCTATAATCCTAGATTTTCATTAGTCCAATTTTTATAGTTCAAGCTTTTAGGAAGCTAGAAGTCTGTGCTAAGCCAACAGTTGTAGTAAGTAGTACCCGTATTTGTATTAGTAGCGGTAGCTGGCTATGCTTGTCTAGATTGCTTGAACAGCTTTTGCAATAGGTCCAATTGCTCCTTTGAGAAGCATTTCCATTTCAGACATTGGAGTTTTCTTCAGCTAGTGTAACAGTGGCATGGTTTGCTTCGGCCCTGCTAAACGGAGGAACAGAAGGCTTCCAAGCTCATTTCCCATGAATTTTCCTAGCAAGTTTCTTTTCTGTGTGCCATCTTCCTACCATGTTCACACCTGGCCTTTCCTTTTTTTTGGTCCATCATAGAAGAACTTTTACTTATTAGAGCAGAGCTTTTAGACTTCACCTGAATAGATGTTCCAAGCGTTTTGTCTGCCTCAGTACTGATGTCTCTAGTAGTAGGAACTTTCACATTCCTCATCTTAGTTTTTGTTAATTATAGTAGGAGCCTGAAGATTCTGTTTTCTATCAGCCGTATGTTCCCATTCATTTGTTTCCTATAAATGAAGTCCGCCACAAGTAGCATACAAGAAAACTGTAATGTTGAGTCAGGGACTGGTTAAACCACTCTGTTGTATGTTATGGAGAATGCTGTCAATTTCGAAGGACTCTTTAGTATTTTCCAAGGTTAGAGAAAGCTGCTTTGGGTACACCCAAGATCTCTATAGATGTTGGTATGATAAAAATCTTTTGCCGATCTTATTTATGATAAAAACCATACTATGACCATAATATTCTCTGCTACCCATCCTTCGAGGTTTGAATCAGTCAAACCATTGTAAATAGTTTTCCCATTTAGTTTGTGACTAGTAATGGGTATGCAACACCTTCATTCACAAACCAGCACAGCCATGTGTATACAGTATATTACTTGAGTTGAATGAACTGAAGAATGTTTTTGGCTTGAGTTCTTTGATTATGTCAATTTAAGTTGCTTTGCATTAATTTTTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAAGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGACTTTGGACTTGGTGGCGAGATGACGGGAGAAAACAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGACTTGAGGTTAATTTCCTTATGATTTTGAAATTCATTGAATATTCTATTCAAATTTCTAAATTTATTTTATCTGATGTATTTTGTTTTCTACTGTTCCCTTGACGAGTTTTGACCAAAATAACCAGAATTTGGAGACCATTTGACATAAATATTATTACTATTCACCAAGAATAAAGAAAGAGGCTGGCCGGCCATACAAAACCAAAAGGCAAAACAAATAAGGGATCTATAAAAAAAATTACAAAAATTTTCTCCAAATGCCGAGAATCATCCAAAACAAATGGACGACCAAAAACTCTCTGAAGCGAAAGCCTAAAGGGAAGCATTGTAGTGAGCCAAGCTTCAAACATCATCCCATGACATCTCTATCCCCGTAAAAGTCCTCGTGTTTCTTTCTAACTAAATACTCCCAATAATAATAAAGTAATCAGCCTGCCAAAGAACCTTCTCTTTGATACGAAAGGGAGGATGAAGAATATTCTCCTTCACACATCACTAAGTGTGATTAGAAATGGGAGAAAAAAAAAAAAAAACGATACCCCAGATGCCTGAAATTTTTCTACTAAATCTTCTCAGCAAACATGCATCGGAGGAAGCTCTACGGATGTGCCTGCTTACAACAAAGATCACACTAGGAGATAGATTCATAAGCCCAAACCCTTTTATTCTAGTGATTGGGAGATAACATGAAACCCTCGTTTTTCGTTAATATTAAGCAAGGAAACCAACTCCCTTGCTTCTCTACCAAATAAGGTTCTCTTAGAAGGGAACTTAATGAAACCAAACTGCCCAAAAGAAGAAAAGAAAGCAACTATGGAAATTTTCTTTATTGAAGAGGGTATAGAGCAGGGAAATACAGACTTGATAAAACCACTGCTAAGTGAATAGCCTTGTTGCCATTCGCAATTGAAAGATTGGGCAATATATAGTATGGGGAATAGTACTAAGAAATAAATTTCCAGTTATTCCTAAAAATGCCTACAGCCACTGGATTAAATTTCTACTTGTAGGAGTATATATCGTATTTTCTCATATATCTTGTGCCACAACATATCGAACTTTGATTAACAGAGCAATGTTCTTTAAAGCTAGATTTTCGATGCCCAAACCACCCTCTTTACAACCTTTAGAAACTCTCACCTGACAACTGACAAGGTGAGAACTCCTCCCCAAAAGATGTCCCTCGTAAGTTTAATGGACAGTAGTTGGAGCTTTGAAGATAGAAAATATTGCAGAATCCCTCTCAAAACCAACTAGATCAAAGAAAGTCTGCCACCGTTAGAGGAGAAAGCCTTCTTCGATGATAAGAGGTGGTTTTCCTCCTCTTTCTAATACCTCTAGTCCCAAATTTTAGCCTTGAGTATTCCATCAACTAGGGTCATTTTAACTGAATGCATACAATTATTCACCCAGGGTTCGACAGAGGTCACACTGAACCAACCTCTTCTGACGTTGAAATAGTGCCAAAATAAGGGAAGAAGTGAGTCCTCTCTTCCTGAAAAAAGCACCCAGACCAACCTATTATGCCAAAAATGGAAAGCAATCTATCAATCAAGCAAAAATTCCCAACCCCAAGAGTTACTCCGCAGAACCAAACATGCCTTTCTCAATCACAAACTTCACTCTATCCGTAAAGATTCATTAGAAAGACTTGCTTTCTATTGGAAAACACCACCAAACATGAAGGCAAAGATAATCAAGAAGAAAGTGCCAGATCCTTCTCTCCCAGACCTAGTTCATGTAATTATTTCAATGTGATCATTCAAAATCTCAATCTCTTGCTTTCTGTGTACTTGTAAGTTGTAATAGGTTAACATTATGTGCCTGTTATTTTCTCATTACTCATTTGCATTAGTAATTCTTATATAAACAAAACGAACTGGTAATTTTTTAAAGAGTGTTACTCCAACACGCCAAGGCTCATAATAGGAACCAATGATACTGTTAATCTATGCAAGTAGGATCAGTTGTGGAATAGCCAATCACAGTAGATCACAGACTAATCTGAGTCAGGTTCAAAATAGAAGTCTGCAGTATTTGATTCTCCTACATATCACTGGAACTGTATCGTTTCTAATTTCGTGCTGGAATGAGCACAATGAATTTCATCTTGCGATTACGTTTTCTGAGTGATCCATCAGTCCTTATATTGATAGTATTGGCTTGATCACCCTAGTTACGAATGATTGCTGGCTATACGTTTAAAAGAGAGAATAGTTTCTCTGTCTGATTGATTCTTTCTAGCAATCAATTTCTTGCTCTAGTTATTTAGTACTCTTTTCATTCCAATTGCAAGTAGCTATCGTCATTTCTACTGCATATTTCGCAATCATCTATATCGTAGTTTGAACATGTTTAAGGTTATCATCCTTTTTATTTGATTTCAGGGGTTGATCCCTCGCGCTAAACTTTTGCTAACAATTGGAGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTTCGTTCTTTTTCGCTTTATACTTTGTAAGGCTCCTTTCTCTTACTGTTACAATTCCAGTTTAATATCCAAGAACTAAAGAGGACTTGCACTTTTGTGCAAACGATAGGTCTGTTTGGAATAACTTTTCAAGTGAAAAGATAAGCGTTTAAGTCATTCCAAATAGGCCTGAAAACTAACGATTCTTCTCAAATATTTT

mRNA sequence

TCATCCACAATCCAAACATCCCTTAATGAAATGCCCCTTGTGGAACTCTCTACACCAAGTGTATTCAATCATTGCCATCCCCACACATACCTCTCTTCTCTCACTCCTCTTTTAACTCCATTTGAAGCCACAAGCAAAATCCCATGTGGGCCCTCACCTGGGCACGTTAGCATTCAATCCCATGTTTCGCTAAAGTGCGCCTCGGCTGATGCGTCTACGCTTTAATCGCTAAATTGCGTTTCAATTTCCATTTCATTTTTGTTTTTGTTCTTTTTGAAAAACTTAAAATGAAACTATTTCTTCTCCCTTTGAATTCCTTGGGAGGAAGGAAGCTCTAGCTCCTCTACCTATGGCTGCTCTGCAAATTCTCAAATCGACCGTCTCTCCTCTTTCGATCTCTCGGCCGAAATTTGGCGTCCAGTCGAGCCGGTTCTTCTCGGAGTCGGATTCCACGAGGAGGTTTGTACGGTTTCATGGCCGTCGGAGGAGCTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAAGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGACTTTGGACTTGGTGGCGAGATGACGGGAGAAAACAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGACTTGAGGTTAATTTCCTTATGATTTTGAAATTCATTGAATATTCTATTCAAATTTCTAAATTTATTTTATCTGATGTATTTTGTTTTCTACTGTTCCCTTGACGAGTTTTGACCAAAATAACCAGAATTTGGAGACCATTTGACATAAATATTATTACTATTCACCAAGAATAAAGAAAGAGGCTGGCCGGCCATACAAAACCAAAAGGCAAAACAAATAAGGGATCTATAAAAAAAATTACAAAAATTTTCTCCAAATGCCGAGAATCATCCAAAACAAATGGACGACCAAAAACTCTCTGAAGCGAAAGCCTAAAGGGAAGCATTGTAGTGAGCCAAGCTTCAAACATCATCCCATGACATCTCTATCCCCGTAAAAGTCCTCGTGTTTCTTTCTAACTAAATACTCCCAATAATAATAAAGTAATCAGCCTGCCAAAGAACCTTCTCTTTGATACGAAAGGGAGGATGAAGAATATTCTCCTTCACACATCACTAAGTGTGATTAGAAATGGGAGAAAAAAAAAAAAAAACGATACCCCAGATGCCTGAAATTTTTCTACTAAATCTTCTCAGCAAACATGCATCGGAGGAAGCTCTACGGATGTGCCTGCTTACAACAAAGATCACACTAGGAGATAGATTCATAAGCCCAAACCCTTTTATTCTAGTGATTGGGAGATAACATGAAACCCTCGTTTTTCGTTAATATTAAGCAAGGAAACCAACTCCCTTGCTTCTCTACCAAATAAGGTTCTCTTAGAAGGGAACTTAATGAAACCAAACTGCCCAAAAGAAGAAAAGAAAGCAACTATGGAAATTTTCTTTATTGAAGAGGGTATAGAGCAGGGAAATACAGACTTGATAAAACCACTGCTAAGTGAATAGCCTTGTTGCCATTCGCAATTGAAAGATTGGGCAATATATAGTATGGGGAATAGTACTAAGAAATAAATTTCCAGTTATTCCTAAAAATGCCTACAGCCACTGGATTAAATTTCTACTTGTAGGAGTATATATCGTATTTTCTCATATATCTTGTGCCACAACATATCGAACTTTGATTAACAGAGCAATGTTCTTTAAAGCTAGATTTTCGATGCCCAAACCACCCTCTTTACAACCTTTAGAAACTCTCACCTGACAACTGACAAGGTGAGAACTCCTCCCCAAAAGATGTCCCTCGTAAGTTTAATGGACAGTAGTTGGAGCTTTGAAGATAGAAAATATTGCAGAATCCCTCTCAAAACCAACTAGATCAAAGAAAGTCTGCCACCGTTAGAGGAGAAAGCCTTCTTCGATGATAAGAGGTGGTTTTCCTCCTCTTTCTAATACCTCTAGTCCCAAATTTTAGCCTTGAGTATTCCATCAACTAGGGTCATTTTAACTGAATGCATACAATTATTCACCCAGGGTTCGACAGAGGTCACACTGAACCAACCTCTTCTGACGTTGAAATAGTGCCAAAATAAGGGAAGAAGTGAGTCCTCTCTTCCTGAAAAAAGCACCCAGACCAACCTATTATGCCAAAAATGGAAAGCAATCTATCAATCAAGCAAAAATTCCCAACCCCAAGAGTTACTCCGCAGAACCAAACATGCCTTTCTCAATCACAAACTTCACTCTATCCGTAAAGATTCATTAGAAAGACTTGCTTTCTATTGGAAAACACCACCAAACATGAAGGCAAAGATAATCAAGAAGAAAGTGCCAGATCCTTCTCTCCCAGACCTAGTTCATGTAATTATTTCAATGTGATCATTCAAAATCTCAATCTCTTGCTTTCTGTGTACTTGTAAGTTGTAATAGGTTAACATTATGTGCCTGTTATTTTCTCATTACTCATTTGCATTAGTAATTCTTATATAAACAAAACGAACTGGTAATTTTTTAAAGAGTGTTACTCCAACACGCCAAGGCTCATAATAGGAACCAATGATACTGTTAATCTATGCAAGTAGGATCAGTTGTGGAATAGCCAATCACAGTAGATCACAGACTAATCTGAGTCAGGTTCAAAATAGAAGTCTGCAGTATTTGATTCTCCTACATATCACTGGAACTGTATCGTTTCTAATTTCGTGCTGGAATGAGCACAATGAATTTCATCTTGCGATTACGTTTTCTGAGTGATCCATCAGTCCTTATATTGATAGTATTGGCTTGATCACCCTAGTTACGAATGATTGCTGGCTATACGTTTAAAAGAGAGAATAGTTTCTCTGTCTGATTGATTCTTTCTAGCAATCAATTTCTTGCTCTAGTTATTTAGTACTCTTTTCATTCCAATTGCAAGTAGCTATCGTCATTTCTACTGCATATTTCGCAATCATCTATATCGTAGTTTGAACATGTTTAAGGTTATCATCCTTTTTATTTGATTTCAGGGGTTGATCCCTCGCGCTAAACTTTTGCTAACAATTGGAGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTTCGTTCTTTTTCGCTTTATACTTTGTAAGGCTCCTTTCTCTTACTGTTACAATTCCAGTTTAATATCCAAGAACTAAAGAGGACTTGCACTTTTGTGCAAACGATAGGTCTGTTTGGAATAACTTTTCAAGTGAAAAGATAAGCGTTTAAGTCATTCCAAATAGGCCTGAAAACTAACGATTCTTCTCAAATATTTT

Coding sequence (CDS)

ATGGCTGCTCTGCAAATTCTCAAATCGACCGTCTCTCCTCTTTCGATCTCTCGGCCGAAATTTGGCGTCCAGTCGAGCCGGTTCTTCTCGGAGTCGGATTCCACGAGGAGGTTTGTACGGTTTCATGGCCGTCGGAGGAGCTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAAGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGACTTTGGACTTGGTGGCGAGATGACGGGAGAAAACAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGACTTGAGGTTAATTTCCTTATGATTTTGAAATTCATTGAATATTCTATTCAAATTTCTAAATTTATTTTATCTGATGTATTTTGTTTTCTACTGTTCCCTTGA

Protein sequence

MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFRCAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEVNFLMILKFIEYSIQISKFILSDVFCFLLFP

Homology

[Close]

BLAST of Lcy11g004210 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.2e-66
Identity = 134/146 (91.78%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQ+LKS VSPLSIS+P FG +SSRF S+SDSTRRFVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDADKESNGEEPPESLFMKELKKRG+TPTSLLED+NS DFGLGGEMTGE RDFSSRS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEVNKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.5e-63
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQILKSTVSP SIS+PKFG QSSRFFSE DSTRRFV  HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.2e-62
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQILKSTVSP SIS+PKFG QSSRFFSE DSTRRF   HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVS LS S+  FGVQSSRFF+E DS+RR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQD+ KESNGEEPPESLFMKELKKRGITPTSLLEDT ST+F LGGE TGEN DFS  S
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. ExPASy TrEMBL
Match: A0A6J1JNG1 (uncharacterized protein LOC111488465 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVS LS S+  FGVQSSRFF+E DS+RR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQD+ KESNGEEPPESLFMKELKKRGITPTSLLEDT ST+F LGGE TGEN DFS  S
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. NCBI nr
Match: XP_022149320.1 (uncharacterized protein LOC111017763 [Momordica charantia])

HSP 1 Score: 261.2 bits (666), Expect = 6.7e-66
Identity = 134/146 (91.78%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQ+LKS VSPLSIS+P FG +SSRF S+SDSTRRFVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDADKESNGEEPPESLFMKELKKRG+TPTSLLED+NS DFGLGGEMTGE RDFSSRS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEVNKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. NCBI nr
Match: XP_038905068.1 (uncharacterized protein LOC120091218 isoform X2 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 135/146 (92.47%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSP SIS+P FGVQSSRFFS+ DSTRRFV  HGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDADK+SNGEEPPESLFMKELKKRGITPTSLLEDTN++DFGLGGEMTGENRDFS RS
Sbjct: 61  CAAQDADKDSNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEVNKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 135/146 (92.47%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSP SIS+P FGVQSSRFFS+ DSTRRFV  HGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDADK+SNGEEPPESLFMKELKKRGITPTSLLEDTN++DFGLGGEMTGENRDFS RS
Sbjct: 61  CAAQDADKDSNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEVNKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Lcy11g004210 vs. NCBI nr
Match: KAG7030928.1 (hypothetical protein SDJN02_04965, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.5 bits (641), Expect = 5.3e-63
Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLS S+P FGVQSSRFF+E DS+RR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDA KESNGEEPPESLFMKELKKRGITPTSLLEDTNST+F LG E TG N D S  S
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEVNFLMILKFIEYSIQISKFILS------DVFCFL 175
           AVSTEV+KSLSNQRERSMQLNSEGLEVNFLMIL    Y  ++ KF+ S      D +C L
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVY--ELFKFLNSLYLICFDFYCSL 178

[Close]

BLAST of Lcy11g004210 vs. NCBI nr
Match: XP_023532263.1 (uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 9.0e-63
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLS S+P FGVQSSRFFSE DS+RRFVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFSELDSSRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRS 120
           CAAQDA KESNGEEPPESLFMKELKKRGITPTSLLEDT ST+F LGGE TGEN DFS  S
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

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BLAST of Lcy11g004210 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 62/146 (42.47%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 2   AALQILKSTVSPLSISRPKFGVQSSRFFSESDSTRRFVRFHGRRRSLRYGCVCRRLSFRC 61
           ++L+I+K   SP+S  R K  +       + +  +R  R    R   R      R+S   
Sbjct: 4   SSLEIVKLCGSPVSFPRHKSPI-------KLECRKRVFRLPNSRSWHRL-----RVS-SS 63

Query: 62  AAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTN-STDFGLGGEMTGENRDFSSRS 121
           A    D +S GEEPPESLFMKELK+RG+TPTSLL+D     D    G+ TG +   S  +
Sbjct: 64  ALNGGDNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTT 123

Query: 122 AVSTEVNKSLSNQRERSMQLNSEGLE 147
           A +   +KSL NQRERS+ LNSEGLE
Sbjct: 124 ATTPAFDKSLLNQRERSLALNSEGLE 133

The following BLAST results are available for this feature:

BLAST of Lcy11g004210 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g004210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5D9	3.2e-66	91.78	uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1JBV1	7.5e-63	90.41	uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048...	[more]
A0A6J1E457	2.2e-62	89.73	uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1JUF8	1.3e-59	86.99	uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JNG1	1.3e-59	86.99	uncharacterized protein LOC111488465 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lcy11g004210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149320.1	6.7e-66	91.78	uncharacterized protein LOC111017763 [Momordica charantia]	[more]
XP_038905068.1	1.5e-65	92.47	uncharacterized protein LOC120091218 isoform X2 [Benincasa hispida]	[more]
XP_038905067.1	1.5e-65	92.47	uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]	[more]
KAG7030928.1	5.3e-63	78.89	hypothetical protein SDJN02_04965, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023532263.1	9.0e-63	90.41	uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy11g004210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50020.1	1.3e-14	42.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699:SF1	F2J10.10 PROTEIN	coord: 30..146
None	No IPR available	PANTHER	PTHR35699	F2J10.10 PROTEIN	coord: 30..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g004210.1	Lcy11g004210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane