Lcy11g003880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g003880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Location	Chr11: 3787424 .. 3791185 (-)
RNA-Seq Expression	Lcy11g003880
Synteny	Lcy11g003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATGGAAAAAAGTTCATCGATTCGATCATTATACCCAATCAGTAAGCTGAATCACGAGGCTGAATTTTCATCCGGCTGAGAGATAGATTCAGGGAAATTTCTTGGAGCTGAGAAAATGGACAGAGACGGAGAGGGAGCGCCGGCAGCGGCGGCGGCGTCGTCATCATCGTCGTCTTCTCAGACCACCAGACGTGGAAGGAGGGTGGATCCTTTGCTGGTTACTTGCAGGTTTTTCAGTATTCTGACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATGTAATCACTCTGTTTCTGTTGCTTCTTCGTTAAGTAATTTTTGAAATCGAATGTGGTATCATGCGCTTGTGTAAATTTTTGGCAGATATTCGATGGTATATTTCGGTGTTATGCAGTTGTGATCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTACCAAGAACTGGAAGGTTTTTCCGTTTGAACCCTAGATTCTCAATTTCTGAAGTGATTTTACTTCTGACTCTGTTTGTTTTCCACTTCAATCTTTGACTCTCTCACCTATTTCTTATTACGGCTTTTGGTACCATAAATGTGTGGCTGTTCTAGTTGTGTGGTGGGTGTCAATGCGCTGTAAATGTGCCCGAAAATTGGAATGCGAAAAGTAGTCTTAGTAGCTTGTCTTGGAATAGCTCATAATAATTCGATGGTTGGAGCTAAGAATAGAAGTACGCTTTAATTTTAATTGACATGTATGAACTAAGTTTATCTCTTAATCCTCTTTTACTTTGCCCTATCGAAAATTTATTTCATTCTATCAATCATTAAACTATAGTGGCATTGGCTCTTTCTGGTTGCATAAGGTTACTTTGACCTTCACATTAAACCAGCAAAGTGATTATCAGAAATGAAGGGATATATGGTTTCTTTGGACTTTGCTAGGCAATAATTGATGAGCGGAGCTTGAAATTTGTCCCCTTCCATCCATACAGTTGTCTGGCTCCACGACGGAACTGGTTTTTATTTGTTACTAGGGAGTTGTTTAAATGGGGTCTTTAGTTTTTATTAGTTTGGTGGTGCATTTAGAGTCATACAAAAAACAATCCTTTAGGAGAGGACTTTTTGGTTTGAAGAAAAGGGAAACCTATGATGCCCTTTACGTATTACATCCATTGTTCCATATTCATTTTCTCCCCTCGACACAAAATAAGCATTTCTTTTTTACACACAAATTTATACTGAAGGATTTATTTATTTGATGCATATCTCCATAGTAAATGTTTCCCTCCCTTTCATTCTCTGGGATGGCACTTGACTGCTAGGATGTATTAAGCATTATTTTTTGATATAGAATTCCTATTGAAGGATTTATCAAGTGGAATCATATATTCGTTTGTAGCAGATTATTCCCTGCCAAAATTTTCTGGGATGTCAGTGAAACTGCCATGAAGTATTATAGTTCGCTATATTCCTTGAAGCTCTAAGATGTATATGATGTCTTATTCCTTTCTAAGATTTCTTAAATGATTTTTCCCTTTGAGGGCTTGCTTGCCTGCTGCATCATTTAATTCAGTTGGGTCTATGCATTGCAGGTATTTGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTGTACGGTTTTATTTTTAGTAGCATTTGCAACTTTTTTCTTTTTATTTTTCTGACTTGTTCCTATGTGACGTGTGTCTCAATGTGAAAACCTTGTTTATTGATAAGCTTTATGCATCCAGTCAATTTCGTAACTGAATTGTTGGTTTTTAGGAGAAGCATACAATGAAAAAAGTTTAAGTTGCAATTGCTTTTGTGCAGTGTTGCAGTAATGACAAGAGCTTTCCCAGTGTATTCTGTAGAGCAGAGAGAGCTTATTCTTCTTCAAGATGCTGCAAGTTATCTCCTCCTCGCTTGTGGTGCAATCTATGTTGTATCGGTGAGCCTTGTGAACAACACCTTGTTTCCTAATTTTACTTGTTCATGCATTTGTCCACTAGCAAGTTAGTGAAGTCAAAATTGTATAGTCAGTGATCCAACTGAGTCTTTCAGGAAACTTTGTTCATATTTGCGTAGTAATGATTTTATAGATAATACTTGCTTGGAGAAAAACATTAAATACATCAAGAAACAGAGAGTGTGCAGTATGCAACAAAGTAAAAAAGAAATCAGACAGTTGAAAGCTGACAATACGTTCTAGGGGTTGCTTGCATCAGTATATCCTGTATATCTTTAGAGGTTCATGATATGGATTTCATTTATTTGGTTCTTGTGGTCTCGTCTTAAAATCTCAACATCCATGATACTTTCTGTAATGCTGGCGTTCTTCCTCCTTAGTACGTCTTTGCGTGCACTGAATTTTATTTTCAGTATGTGTTAGACTAATTATGAGAGGTGCAAATAATTATGAGAGGTGCAAATTGATTGATGAACCTTCTGTGCACCAAGATGCCATTTGGCCCATTTCATATATATGTGTGCTATCCTATTGTACAGCAGTTAATTAAATTATCATCCCTACGCAAAAAAGAAAGTATGCATATGGTGTATAAAATATGTGATAACATGCTTGTCTGCATGGATAACACTAAATGACATAATTTTTGCATTCTCTTTAAAATATCCTGTCATGAGTCAATTGATTCAGGTTTTTCCTACGAATTTTAAGGGAATACTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTGCAAAGGACAGGGTTGTCAAAGATCTTCAGGTAAGCTTTTTTACTGGACAGTTCCATAAACTCATTGGGGAGTAGGGAGAGATACTAACATTGTCTTGTTGCCATTTTTTTTAATGAAACACGTTAAAGCATATGTATGCATATAGCTGTTTGGGTATTATATCAGCTTCTTTCTGTTTCAATTAGCAACTTCTTCTCCTGTTTCAGTCTTTTAAGTATTGTGGGAACTGGAGTTGGTTACGTATAAACACACCAAGTATGATCATCTGTGTCTGGTTTCTGGCATCAGTTACCCGGTAATTAGAGGGTTTTAGTTTACTGGAAAACTGAATTTTAGGACAAACAAGGCCCCATTTTGTTGCCGATTATGTTTCAGAATATTTGTTTTAAAAAATTAAGCTTGTTAATGCCCTATTCTTCATATGTTTTGTTTTTTTTACTTTTTGAAATTTTAGCCAGTAGATTTTTTAGCACTACTTTCTTTTGTTCTTAAAATTTGGCTTTGATTTTGAAAATGAACAGCTTTAATTTTTGTAAACATAAAACTAAAAACCACATTGTTAGCAAACTGGCCCAAAGTACTGATAGTCTTTTCGTAGGGCTCCACTCCTCTATGTGTGGTTTGCATGAACCGAGAATTCTTTGTTTGTTATTCAACCATTTTCCCACATAATTTGATCTTAAGGAAGCCATGGATTTGTTGCAGGAGTTAGAAAGACAAAAACAAGAACTTGAACGGTTGCTCATTGCAGAAACTGTTTGAAGCAACTTAAAGACATCCCCCTCGCACCTGACTATCGCTTCGCTGCTGGAATTGTACGAGCATTTTTGCTGTTTCATTTTTGATCCTACTATAATTGTCCCCTTTTAGAGTTCTAATCATGTAAATTGTGTCTAACTTGACAACTTGTCCCTACAGTGATCATGTAAATTCTGACTGTCTTGACAATTTGTCTCACTATGTTAACAAAAGAATTTGTTTATTGAAACAAAAAATTGG

mRNA sequence

CTTGATGGAAAAAAGTTCATCGATTCGATCATTATACCCAATCAGTAAGCTGAATCACGAGGCTGAATTTTCATCCGGCTGAGAGATAGATTCAGGGAAATTTCTTGGAGCTGAGAAAATGGACAGAGACGGAGAGGGAGCGCCGGCAGCGGCGGCGGCGTCGTCATCATCGTCGTCTTCTCAGACCACCAGACGTGGAAGGAGGGTGGATCCTTTGCTGGTTACTTGCAGGTTTTTCAGTATTCTGACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTATATTTCGGTGTTATGCAGTTGTGATCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTACCAAGAACTGGAAGGTATTTGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTTGTTGCAGTAATGACAAGAGCTTTCCCAGTGTATTCTGTAGAGCAGAGAGAGCTTATTCTTCTTCAAGATGCTGCAAGTTATCTCCTCCTCGCTTGTGGTGCAATCTATGTTGTATCGGGAATACTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTGCAAAGGACAGGGTTGTCAAAGATCTTCAGGAGTTAGAAAGACAAAAACAAGAACTTGAACGGTTGCTCATTGCAGAAACTGTTTGAAGCAACTTAAAGACATCCCCCTCGCACCTGACTATCGCTTCGCTGCTGGAATTGTACGAGCATTTTTGCTGTTTCATTTTTGATCCTACTATAATTGTCCCCTTTTAGAGTTCTAATCATGTAAATTGTGTCTAACTTGACAACTTGTCCCTACAGTGATCATGTAAATTCTGACTGTCTTGACAATTTGTCTCACTATGTTAACAAAAGAATTTGTTTATTGAAACAAAAAATTGG

Coding sequence (CDS)

ATGGACAGAGACGGAGAGGGAGCGCCGGCAGCGGCGGCGGCGTCGTCATCATCGTCGTCTTCTCAGACCACCAGACGTGGAAGGAGGGTGGATCCTTTGCTGGTTACTTGCAGGTTTTTCAGTATTCTGACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTATATTTCGGTGTTATGCAGTTGTGATCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTACCAAGAACTGGAAGGTATTTGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTTGTTGCAGTAATGACAAGAGCTTTCCCAGTGTATTCTGTAGAGCAGAGAGAGCTTATTCTTCTTCAAGATGCTGCAAGTTATCTCCTCCTCGCTTGTGGTGCAATCTATGTTGTATCGGGAATACTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTGCAAAGGACAGGGTTGTCAAAGATCTTCAGGAGTTAGAAAGACAAAAACAAGAACTTGAACGGTTGCTCATTGCAGAAACTGTTTGA

Protein sequence

MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTRAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQELERQKQELERLLIAETV

Homology

[Close]

BLAST of Lcy11g003880 vs. ExPASy TrEMBL
Match: A0A1S3BY74 (uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 178/198 (89.90%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAI 60
           M+R+GEGAPAA+++SSSSSSSQ TR  R VDPLLVTCRFFS++TALTAILCIVSNVISAI
Sbjct: 1   MERNGEGAPAASSSSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVISAI 60

Query: 61  RSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTR 120
           RSFKN SDIFDGIFRCYAVVI FFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMTR
Sbjct: 61  RSFKNQSDIFDGIFRCYAVVITFFVVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVMTR 120

Query: 121 AFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180
           AFPVYSVEQRELILLQDAASYLLLACGA+YVVSGILCIGFLKRARE+KETAKD+VVKDLQ
Sbjct: 121 AFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKDLQ 180

Query: 181 ELERQKQELERLLIAETV 199
           ELERQKQELE+LLI+ETV
Sbjct: 181 ELERQKQELEQLLISETV 198

[Close]

BLAST of Lcy11g003880 vs. ExPASy TrEMBL
Match: A0A0A0KYH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 179/200 (89.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MDRDGEGAP--AAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVIS 60
           M+R+GEGAP  A AA+SSSSSSSQ TR  R VDPLLVTCRFFS++TALTAILCIVSNVIS
Sbjct: 1   MERNGEGAPALAPAASSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVIS 60

Query: 61  AIRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVM 120
           AIRSFKN SDIFDGIFRCYAVVIAFF VLAETEWEFI KNWKV EYWAGRGMLQIFVAVM
Sbjct: 61  AIRSFKNQSDIFDGIFRCYAVVIAFFAVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVM 120

Query: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKD 180
           TRAFPVYSVEQRELILLQDAASYLLLACGA+YVVSGILCIGFLKRARE+KETAKD+VVKD
Sbjct: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKD 180

Query: 181 LQELERQKQELERLLIAETV 199
           LQELERQKQELE+LLI+ETV
Sbjct: 181 LQELERQKQELEQLLISETV 200

[Close]

BLAST of Lcy11g003880 vs. ExPASy TrEMBL
Match: A0A6J1E3M8 (uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC111430498 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.6e-85
Identity = 172/199 (86.43%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 1   MDRDGEGAPA-AAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISA 60
           M+R GEGA A   AA++++SSSQT+R GRRVDPLLVTCRFFS++TALTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMT 120
           IRSFKN SDIFDGIFRCYAVVIAFFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGA+YVVSGILCIGFLKRAREEKET+KDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELERLLIAETV 199
           QELERQKQELE+LLI+++V
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Lcy11g003880 vs. ExPASy TrEMBL
Match: A0A6J1J849 (uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.8e-85
Identity = 172/199 (86.43%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 1   MDRDGEGAPA-AAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISA 60
           M+R GEGA A   AA++++SSSQT R GRRVDPLLVTCRFFS++TALTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMT 120
           IRSFKN SDIFDGIFRCYAVVIAFFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGA+YVVSGILCIGFLKRAREEKET+KDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELERLLIAETV 199
           QELERQKQELE+LLI+++V
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Lcy11g003880 vs. ExPASy TrEMBL
Match: A0A6J1D697 (uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017704 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.7e-79
Identity = 166/204 (81.37%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 1   MDRDGEG-----APAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSN 60
           M +DGE       P  AA+SSSSSSS TTR GRRVDPLLVTCRFFS+LTALTAILCIV N
Sbjct: 1   MPKDGEEEVAGITPVPAASSSSSSSSHTTRHGRRVDPLLVTCRFFSVLTALTAILCIVVN 60

Query: 61  VISAIRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFV 120
           VISA+RSFK+ +DIFDGIFRCYAV+IA FVVLAETEWEFI K WKV EYWAGRGMLQIFV
Sbjct: 61  VISAVRSFKDKADIFDGIFRCYAVLIASFVVLAETEWEFIIKFWKVLEYWAGRGMLQIFV 120

Query: 121 AVMTRAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRV 180
           AVMTRAFP YS +QRELI+LQD ASYLLL CGA+YV SGILC+GFLKRAREEKETAK+R 
Sbjct: 121 AVMTRAFPAYSEDQRELIILQDVASYLLLGCGAVYVASGILCLGFLKRAREEKETAKERT 180

Query: 181 VKDLQELERQKQELE-RLLIAETV 199
           VKDLQELERQKQELE RLLIAE+V
Sbjct: 181 VKDLQELERQKQELERRLLIAESV 204

[Close]

BLAST of Lcy11g003880 vs. NCBI nr
Match: XP_008454462.1 (PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 2.4e-88
Identity = 178/198 (89.90%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAI 60
           M+R+GEGAPAA+++SSSSSSSQ TR  R VDPLLVTCRFFS++TALTAILCIVSNVISAI
Sbjct: 1   MERNGEGAPAASSSSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVISAI 60

Query: 61  RSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTR 120
           RSFKN SDIFDGIFRCYAVVI FFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMTR
Sbjct: 61  RSFKNQSDIFDGIFRCYAVVITFFVVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVMTR 120

Query: 121 AFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180
           AFPVYSVEQRELILLQDAASYLLLACGA+YVVSGILCIGFLKRARE+KETAKD+VVKDLQ
Sbjct: 121 AFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKDLQ 180

Query: 181 ELERQKQELERLLIAETV 199
           ELERQKQELE+LLI+ETV
Sbjct: 181 ELERQKQELEQLLISETV 198

[Close]

BLAST of Lcy11g003880 vs. NCBI nr
Match: XP_038905258.1 (uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida])

HSP 1 Score: 334.3 bits (856), Expect = 7.0e-88
Identity = 181/198 (91.41%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAI 60
           M+RDGEGAPAAAA    SSSSQT R  RRVDPLLVTCRFFS+LTALTAILCIVSNVISAI
Sbjct: 1   MERDGEGAPAAAA----SSSSQTIRPRRRVDPLLVTCRFFSVLTALTAILCIVSNVISAI 60

Query: 61  RSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTR 120
           RSFKN SD+FDGIFRCYAVVIA FVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMTR
Sbjct: 61  RSFKNKSDLFDGIFRCYAVVIACFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMTR 120

Query: 121 AFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180
           AFPVYSVEQRELILLQDAASYLLLACGA+YVVSGILCIGFLKRAREEKETAKDRVVKDLQ
Sbjct: 121 AFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180

Query: 181 ELERQKQELERLLIAETV 199
           ELERQKQELE+LLI+ETV
Sbjct: 181 ELERQKQELEQLLISETV 194

[Close]

BLAST of Lcy11g003880 vs. NCBI nr
Match: XP_004147506.1 (uncharacterized protein LOC101214901 [Cucumis sativus] >KGN53894.1 hypothetical protein Csa_011853 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87
Identity = 179/200 (89.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MDRDGEGAP--AAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVIS 60
           M+R+GEGAP  A AA+SSSSSSSQ TR  R VDPLLVTCRFFS++TALTAILCIVSNVIS
Sbjct: 1   MERNGEGAPALAPAASSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVIS 60

Query: 61  AIRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVM 120
           AIRSFKN SDIFDGIFRCYAVVIAFF VLAETEWEFI KNWKV EYWAGRGMLQIFVAVM
Sbjct: 61  AIRSFKNQSDIFDGIFRCYAVVIAFFAVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVM 120

Query: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKD 180
           TRAFPVYSVEQRELILLQDAASYLLLACGA+YVVSGILCIGFLKRARE+KETAKD+VVKD
Sbjct: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKD 180

Query: 181 LQELERQKQELERLLIAETV 199
           LQELERQKQELE+LLI+ETV
Sbjct: 181 LQELERQKQELEQLLISETV 200

[Close]

BLAST of Lcy11g003880 vs. NCBI nr
Match: XP_022922529.1 (uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothetical protein SDJN03_24454, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014903.1 hypothetical protein SDJN02_22534 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 9.4e-85
Identity = 172/199 (86.43%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 1   MDRDGEGAPA-AAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISA 60
           M+R GEGA A   AA++++SSSQT+R GRRVDPLLVTCRFFS++TALTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMT 120
           IRSFKN SDIFDGIFRCYAVVIAFFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGA+YVVSGILCIGFLKRAREEKET+KDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELERLLIAETV 199
           QELERQKQELE+LLI+++V
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Lcy11g003880 vs. NCBI nr
Match: XP_022984240.1 (uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharacterized protein LOC111482612 [Cucurbita maxima])

HSP 1 Score: 323.2 bits (827), Expect = 1.6e-84
Identity = 172/199 (86.43%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 1   MDRDGEGAPA-AAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISA 60
           M+R GEGA A   AA++++SSSQT R GRRVDPLLVTCRFFS++TALTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMT 120
           IRSFKN SDIFDGIFRCYAVVIAFFVVLAETEWEFI KNWKV EYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGA+YVVSGILCIGFLKRAREEKET+KDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELERLLIAETV 199
           QELERQKQELE+LLI+++V
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Lcy11g003880 vs. TAIR 10
Match: AT4G33625.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 232.6 bits (592), Expect = 2.7e-61
Identity = 122/194 (62.89%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAI 60
           MDR  E   + A  SS S+     + G R DP LV CR FS++T+L AILC+V NV++A+
Sbjct: 1   MDRTEEIEESPAGPSSGSAK---LKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAV 60

Query: 61  RSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTR 120
           RSF+++ D+FDGIFRCYAVVIA FVVL ETEW FI K  KV EYWAGRGMLQIFVAVMTR
Sbjct: 61  RSFRDSHDLFDGIFRCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTR 120

Query: 121 AFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180
           AFP Y  ++++L+LLQ+ ASYLLLACG IYV+SG+LCIGFLKRAR++KE ++++ VKDL+
Sbjct: 121 AFPDYMTQKKDLLLLQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDLE 180

Query: 181 ELERQKQELERLLI 195
           E+ R+K+ELE+LL+
Sbjct: 181 EIARRKEELEQLLL 191

[Close]

BLAST of Lcy11g003880 vs. TAIR 10
Match: AT4G33625.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59
Identity = 122/194 (62.89%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 1   MDRDGEGAPAAAAASSSSSSSQTTRRGRRVDPLLVTCRFFSILTALTAILCIVSNVISAI 60
           MDR  E   + A  SS S+     + G R DP LV CR FS++T+L AILC+V NV++A+
Sbjct: 1   MDRTEEIEESPAGPSSGSAK---LKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAV 60

Query: 61  RSFKNNSDIFDGIFRCYAVVIAFFVVLAETEWEFITKNWKVFEYWAGRGMLQIFVAVMTR 120
           RSF+++ D+FDGIFRCYAVVIA FVVL ETEW FI K  KV EYWAGRGMLQIFVAVMTR
Sbjct: 61  RSFRDSHDLFDGIFRCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTR 120

Query: 121 AFPVYSVEQRELILLQDAASYLLLACGAIYVVSGILCIGFLKRAREEKETAKDRVVKDLQ 180
           AFP Y  ++++L+LLQ+ ASYLLLACG IYV+SG+LCIGFLKRAR++KE ++++ VKDL 
Sbjct: 121 AFPDYMTQKKDLLLLQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDL- 180

Query: 181 ELERQKQELERLLI 195
           E+ R+K+ELE+LL+
Sbjct: 181 EIARRKEELEQLLL 190

The following BLAST results are available for this feature:

BLAST of Lcy11g003880 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BY74	1.2e-88	89.90	uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=...	[more]
A0A0A0KYH6	2.9e-87	89.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1	[more]
A0A6J1E3M8	4.6e-85	86.43	uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC1114304...	[more]
A0A6J1J849	7.8e-85	86.43	uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612...	[more]
A0A6J1D697	3.7e-79	81.37	uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Lcy11g003880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454462.1	2.4e-88	89.90	PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]	[more]
XP_038905258.1	7.0e-88	91.41	uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]	[more]
XP_004147506.1	5.9e-87	89.50	uncharacterized protein LOC101214901 [Cucumis sativus] >KGN53894.1 hypothetical ...	[more]
XP_022922529.1	9.4e-85	86.43	uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothet...	[more]
XP_022984240.1	1.6e-84	86.43	uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharac...	[more]

BLAST of Lcy11g003880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33625.1	2.7e-61	62.89	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G33625.2	1.1e-59	62.89	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34965	OS07G0118300 PROTEIN	coord: 13..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g003880.1	Lcy11g003880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane