Lcy11g003480 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g003480
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
Location	Chr11: 3312675 .. 3322603 (+)
RNA-Seq Expression	Lcy11g003480
Synteny	Lcy11g003480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTCAGAGTAGGAGTTGCATTGACTGCATGAGCCTACGTGGCCGACTATGATTGGAAAAACCATGTCATCGGAGAATTCATCCGAAAAAGTATTGAAAGAGGAACCCTAACATCGAATGCCATCGTCGTTCTGCCTCAGCTCTCACTATCCTGCAAATTTCGGGTTCGTCTCATCGTCATCGATTGCCAATTGGATTGGCGCCGAGATCTAGCTGGCCGTAGACAGCCACAGTCGCCGATCAATCAGGCAAGATTTCATTTCGAAAAGCAACTTTTCTGTTGATGTTTGTGGATTTGCTCGGTCAATTGGTCCTGTAACACCAGGATTACGGATTTCTGGTTTACCAAGTTTCGTCTGATCGGGTTGCAAGCAAAAACATTGCACTGCCTGCGTCGATAAAGAACAAATGTCGGGGCTGGAAAAATTTTGGAGAAAAATGCCTTGCCCGGCTGGTGTTATCGAGTTTATAGATGATATTGATGAACTCAACATAGATCATAGGAAATTAATTAACTTCTTCAAATCTTAGGAAGATTAATCCTAGTCGAAGCTGCATGGTTTATCGCGTGGATACGATATAACAACCTCTATTTTGTCTGATTCTTTAATGTTCGGTGCTTTTGGCCTTTGAGTGGGAATTGGGACCTGGGAACTTTCTGGCATTGCGCAGGCTGAGTTTACCGGGTTGCCAAATTGGGTACTTATCTCACTCGGTACAGCTTCCTATGTTTTATAGTTCAATTCCGGGAGATTAGACATAGCGGTTGGTTTGTCCTCCATCTTCATCTTTTTTGGCCATCTTTTGGCAAATTCGATGGCGTAGAAGAGATCTGAACATCGTTATTTATTAACTCCGCATTTCCGAGCCAATTCTATTTCTCTTTTTGGGGAACCTAAGGGAACTTTTAAACATAAAGTGAGATTTTTTTTCCCTCTAGCTATGAGCATCTTCCATGATGCATCGCATAAATAAGCACACCATATGGGAGATGCAGAATTCTAAAGTTCACGAATCTTCAATAATCAAGAAAGAGATTAGGCGAAAAGTTAATCAAATTGTGGAATTAAGCATAGAATGGAAGTCACTCTAGTATTTAGACAAAGAAGTCCATGAGAAACCAGAAAATGAACTTTCCTATAGAAGATCTTCATCATTGAAAATTCCCCTGTTTTCCCTCAGCCAACCCAGAGAAGCTCGGATAGCTTGGACAATGGAACATCCTTACATTTATGAAGTTTTTTTATGCATTACTTCCAAATTTACAATATCTTTGACAATCATATTTTAGCATCGTTATATTGTTTCATTTGGCTGACATTTTAAATTCTCACATGGTAGTGCAGTAGAGAATGATGAAGCTGCAAACATACGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATCGTTTCTTTCTTGGGGTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTATAACTCAATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTTGAGTAAGTTGTCAATTCCACCGTCTGGTATATATCTTGTTTTGTATTTGTACAAGCTTAAACTAAGATGTTTAGGTAATTGGAATTTATTGAACGTTTGGTACCCAATAATTTCAAGGCATTATTTGTTGTTAGAATGTCAGGTGTAACAAGGCCTTGTTAGATGAACTCACACATTATTGTTTAAATTTGATTCTTAAGATCTTATATGGAGAATTTATGACTGTGGGAATACTGCTTTTTACTCATTGCTTGCTAGAGTAAAGTTTTTAAATATCCTATGATGTTTGCTTCTGGTCCTCTGAGGCTTTTATGTCATCATTAAATAAAGTCAATGACTTGCTTTTCAGGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAGTGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGTAAGTAATCAAGCTACACCCCTAAAGCCCATCTCATTCCTGTCAACTAGAAGTTCAGAATGTGCTCATATTCCTAGTATCTTCTCATGCCAACTGCTTAATACATAGTAAGAAGATAAGGAGGTCAAATAAAGCTCCAAGGAAAGTGTATTATACAAATTTCTTGCCTTCAATATGATGGTGTTTAATAGATGTTATAGGTTAAATTGCATGGTTTTAGATCCTCCATTCTTCAATCTTCAGTCAGTGTATTTGCTCTTTATTAACTCCATCCTCATTTCATATTGATTATGCTGAGTTCGCTCTTGTAGGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCCGAAGAACTCAATTCGTGCGTCTAAGCTCGGTCAACTCATTATGTTTTTGATGCTTCCAATATTTATATTTCAGCTACTAAAATTCCTTTTATGGAATTGCAGAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAACAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGTAATTGTAAACAATTTAATTCAATTGACTGTCTGGCTAAAAGGTCCTAAATCTTGTGTGATTTTTAATTTGATAATTTTTTTCAATCTCTTCAACCACCATAGATTGACATAGCCCTCAATAAGGGCTTTAGAGGTAATGGGTATAAGTCAGGGTGTCCACCTACTTAGGATTTAATATCTTATGAGTTTCCCAGCGAATAGCAATCGAATGTAGTAAGGTTAGATCGTTGTCCCTTGAGACTAGTTGAGGTGCATGCAAGCTGGTATAGACACTCACAAATATCCAAAAAGTTATTCAACCTCTTCCATATATATATTTCATCCATGGAAGAAAAGCACAGAAGTTCTGGAGGACATGATTCTTTTCAAAGTATTAAAGCTAAAAGAATCTTCTTCGTTATTGCTTATGTTACATTTAGAAACCTAGAGACAGAATATCTGTCCCATCTGCCATGTCTCCCACAAAATTAGTTCGTAGTGTACAATTTTTCTAATTTTTTTTTATTTGTGCAATGCTTTCCTACATCTCTACTTTTTTTTAACAAGTGGTGCTTTGTATCCAGCGTTTAGAACCCAATTTGGTTTAAGTAACGTTTCAAAACTATTAAAAATCTAGGCATTAAGTAACCGTGCAAAAATAAGCTATCAGTATTTGCAAGTCTTCGCTATGTATACCTCACCATCAGTGTGAAAGTGTTGAAATTTGGGTCTCTCTCACGATTCTCACGATTCGTTTCATGGATGTTGACTTTCTCTCTTCTTTTTTCTTACTTCTTTTGAATTGGATGTATTATATTCATGCTTGTTTTTCTTAAGAGGCTATCCTTAATGTTATCTATATTTTATATATTTTTGTGTCCTGGCAATTCAAACTCATCTAAAGGAAGTTGTCTGATACTCATCTAATGGATGATCATTCTCGAACTGGACCTTTGGCTCTCTGTAAAAAATTGGGTGCTTCATTTTTTATTTTCTTGTTTTGTCTTTAATTTTCTTATTGATTGTTAGAAAAGGTGTCAGAGTTTTTTTTTTTGAGAAGGGAAACAATTTCATTGATAGAATGAAAGAGGAGCTCACACTCCAAACACCAAAAGGTGAATTACATAAATGTTTTCCAATTTGCAATTAAGGATGAGAAGCTATAATTAGAGAATGAGTGTTTACATTTACACCAATAAATAGCATGAAAGACAATCAAATCTATAAAAGTAGTAAAGTTGGAGGCCATATCTATGCTGCTTTGATTAACCTTCAATGGAAGGCTTTTGTGTAGTTCTGTTGGAGGAGGGATGTCTTATCCCTCGGTCCTTTGGTTGTTGTTTTTGGGATAGTTCATGAATGATATTCTCTTTTATCTTCTAAAAAAAAAATATTTCTGAAGATCCTACTATTTCTTTCACACCATAGAGACCAAAAAAACACCCTATTAAAAGCCAGCCACAAAATCTTCTTAGAAAAGGTGTCAGAGTATTTCCATTTCCATGGAAATTCTGAAAAGCCTTTCTTTTACCTAAAAAACTGTTTGGAGTCTTTTACATCTCATTGCTTTGGATTAAGAGCGTTAAATGTTCGGTCTTTGGTGCATGCTAGTATCATTCCCTTCAAATCATGGAACTGTTGATTTCGTTCAATTATTTTTTCAATATAGTAGTATACCGGGCTGAAACTTGGTTATAATGAGTGATCATTCTGTTGCAAACAGGAGCAGGAACCACAAATTCATCTGCACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGAGTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAGCACATTAGTATGGTATGCCTTTTTATTACAAAATATGTGGTCCCTGTCTTATTCTCCTTTCTGTTGATCTTGAAAATTTACTCCAATATTAAGGCCATTTCTCCCCTTGTATATAGCAACCCCCACCCCAAAGAGAGAGAGAAGTGTATGACATATATATATTTTATTTATTTACAGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACAAGCCCCCAATGAACAACCGCAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTATAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGGTATGTTATTTAATTGTAACATGAACATTACCTGGTGAACTGTCTTGTTTGGTTAGTGTAGGTTCTGTTTGGGCTCTTGTTGCTGAGCCCTCCAAAGAAAGGCATAAAACGTACCAAATCTCAAACCAACCTCTGAGACCTACTTGTATCCAAGAAAATTTTTCCTGTTATTTCCAATCAAATATTTCTTAGAATAGGAAAAAATAAATGGCCTTTATCTCGTAAGAGAAAAGGGTCCAAGAAAGCTTTTCCAATGAAATACCAAAATTCAGCCACAACTGACACCAGATCATGGAAGCTTATTAGGGGCAAAGCTGTAAATGGTTTAAATCTTTTAAGGCAGATCTACACATCCATAAGGTCTTTAAGAGATTCTTTGGATAAAGGCGAAGATGTTAATCCTCCCTAAGTCATCAGCCAAGGGAGGAATTATATCTCTTTTTAGGACTTTCAACTTCCACGTTTTTTAGTAAAGATGGGTGGAATACAGGGAGGGAGAAGAGATCATTCTATTATACAAGGATCTTCATGGATAAATCTCAAAATATAGTTGCTTTTATGGATTCTACTACCTATCTCACTTTATTTTGGAGTAGCAAATCCCCCCCTGTAATCGTGATTTATCCTCCCTCATATCTATTTGGAGAGGTTTTTTGTAATTATCCTTGATAGGTCTTCCTTTTGTATCTATTTCATACATCAATGAAATGGTTTATGTTTCCTATAAAAAAAAAAAAAAAAGAAACACCATAAGGACGAAGATTACAATCAATGACTCTTATGGATAATAGAGAGATAGGGAGCTAGTTAATTGAGTTTCTATTGAGAAAGGCTTTATAAAAACGAAAATCAAAGGAAAGAGATTCAACCAAAAACTTAGTAAGTTTTTGGTTAGGGTTAAAGAATACAAATGGAAAACTGCAATTGGTGGGTACTATTTTGAAGCCATAAAACCAAATTATGCAACAGTTCCTCACATAATATTTAGAAAATGGAGAGCGAAGGAGACCATAAGAGATCGTCTTCCATAGTCTCCTAAAGCTGTACGTAGAGCTTGGAGTAGAGTCCTCAAACTGTTGGAGCAAGTCTCATACCTAATATTACCTTAGGACTTGTTCTGGGTGAAACAACCAAAACCAGTTGGATGAAAGGGTGATATTTTTACAAACCAATCTTCATTAAAAATGTATATTCTTACAAACCAAGTTCCCGATCTCCAATATGCCTTCCACGCATGATTTTGACACAAATTTATAGTTAACTAATTGTGACTCTCTCTCTCTCTTAGTAAATTATTTCTCAAGAGCTCTTCCAACTTCTCCTCAATAGCCCTAGGAATTTTGAATTGAAATAAGTTATACAGGATCTCCTTGAAAAGTGAAAACTATCTAAATCAAAGTGATTCAACTCTTTGATGAAAGCCATGTGGATTAAGTTCAGAAAAGACTTTCGTCTTGGTTGAAAGCCTATTCTCAAAGCCCTTGGAGATTTATCCTCTGTAGATCGCTTACAACTTCTCCTCGATGACCCTTGTAAATTTCATGGAAAGCTATATGGATTTAGTTCGAAAAAGACTTTTGTGTTGGAGGAAAACCTCTTTCCAAAGCCCTTAGAGTTCTATCCTCTGTAGATCTCTCACAACTTCTCCTCAATGCCCGTGGAAATTTCATGGAAAGTCATGTGGATTAAGTTCAAAAAAGACTTTCGACTTGGAGGAAAGTCTATTTTTCAAAGCCCTAGGAATAGCACTTGGAGTTTTATCCTCTGTAGATCTCTTGCAACTTCTTGGTAGCCCTTGGATCGTATTTTATGGAAAATAATATTTCAAGGTGGCGATTCAATGAGAGATTGTGGAGCTGGCTTGTAGTTTTCAAGGAAGAAATAAATACATAAACTTGTTTTTATATTTTTGTTTAAAAAAAAGGATATTTGTAATGGGTGGCAATATCAGCCTAAATAATGGCAAATATAGCAATTTTTAAAAATATTTGCAAATATGGCAAAAATTTTGAATTAATTTTTTTTATCCCCATTTTGCCCCTAATTGCGCACGCATCTCTGGTTTCTTTCTTCTTGCCTGCATGCTCTGTGGTTTATTTTAATAATAAGTTTTATTTTTTGCAATTTTAATAAAAAAAGTCCCCAAACCATCGCCTTTTTTCTTCTGTTCCCCTTCTTCCTTTCTTTTTAAATTTATTCGTCTGCTCTTAACTTGGAATTTTCTTTGTCATCTTCTACCCACACGCAATTATTCAATTTTCTCCTTTTAAAAGCCAACCTTGAGAAAGTTTCTTTCTATCAACTTTCTATTATCTGATAGAATAGATATCAACAATAATGGAATTCTATCTGATAGAATTCCGTTACTCTAGTGATAGAATCTATCTATCATTGAAAAGAGTTCTATCAGGGATAAAATTCTATCAGATAGAATTCTGTCCTCTATAGGATTCTATCAGATAGAATTCTGTCACTCTAGTGATAGAATCTATCTATAGAATTCTATTTGTATGTTCTAATGTAGTGATAGAATTCTATTATTATCAACAATAATATAATTCTATCGGATAGAATTCTGTTACTATAGTGATAGAATCTATCTATTATTGAAAAGAGTTCTATCGTATAGAATTCTATTAGGTAGAATTTTGTCCTATCTAGAATTCTATCTGATAGAATCCTGTTACTCTAGTGATAGAATCTATCTATCAGTGAAAATAGTTCTATCAGGGATAGAATTCTGACCTATCTATAGGATTCTATCTGATAGAATTCTGTTATTATAGTGATAGAATCTATCTATCAGTGAAAAGAGTTCTATCAGGGATAGAATTCTATCAGAGCAGTAATTCTATCATTGATAGATTCTATCACTGATAGAAAGTTTTCTATGATAAAAAGCTTACAGTGATAGGAAGGTTTCTATCAGTGATAGAATCTATCTGTGATAGAAAGTTTTTCTATCACTGATAGATTCTATCAGTGATAGAAAGTCTTTCTATCACTGATAGAAGCTTTCTATCACAACTAGAAAAACTTTCTATCATATAGAAATAGGATATAACAACCAAACACTGATAGAAATAGGATAGAAGGATAGACCCTATCTCTATTAGTGATAGAGAGACTTTCTATCACTGATAGAAAGAAATTCTATCTGATAGAAAAACTTTCTATCAGATAGAATCTATCTCCATTAATGATAGAAAGCTTCTATTTCTATCAGATAGAAAGTCGTTCTATCAGATAAAATCTCTTTCTATCAATCAGTGATAGAAAATATGAGAAACGAAACACCTACCAAACAACACCAACCAAACACCTACCAAACAACAACAACCAAACACCTTATAAAAAAGAACACAGATAGGATTAATAGGATAGAAGTGATAGAAATGATAGAAAGCAAACACCTACCAAACATTGATAGAATCTATCTCTATGAGTGATAGAAAGCTTCTATCACTGATAGAAAGACTTTCTATCAGATAGAAAGGGCATTTTAGTAAATATACATTTCAAAACTTAAAATTTTGCCATTTTTGCAAAATTTTTCGCGGGCCGCTAAATCTGCAAATATTTTGGGCCGGTTTGCTATATTTGCAACCGGCCCTAAAAAAAACATAAAAGTTCCTTTTCACACTGCTTCCAAACAACTCTATATTTCTAGAAACTAGAGGGTAGAAAAAATCGAAAAGAGCCATAAGGTCAAATTATCACAAGGAACATGTGATAAGTTAAGGAGATAATTCTGTTAATAAATAAATTTGCATTTATTCAATTTCTTTCAAACTAGTTTTAGTAGAACAGAGTGGGTGAGGTTGAGGGTTTTATTTATTTAGGAGAGGCCACCTTTTTGTCTCAATAGCTTTTCCTTTTAAATTCAATTTTTCATACTTGCCAACAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCATCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAGAGGATGGTGAGATAGAAGAAATGTGCATAATTATAATGTGTAATAATACAAGACTGCAGATTCAGAATGATATAGATATCTCTTGTATACGGAAGATGTACTTGGTAAATTTTTAGAGGCAGTCTTCTTCCCATTTGCATAGCCGTGTTTGCTGGTTTGGTTGGTTGTAAATGCTGAATTTGGTGTCTCTTTTGCAGCAATTATGCGACGGTCAAAAAAGAATATTGAAAGTTCTTTCTAGCAGAAGAAGATAGTTTATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGATGCTTTTTGAAAAGCACTCCAATTCACATGCGCATGAGTTAAAGTTAAAGCATTAATTGTTTGGAAGTGGACATTTAGAAAAGGTCCAAGTGTTGTG

mRNA sequence

CGATTTCAGAGTAGGAGTTGCATTGACTGCATGAGCCTACGTGGCCGACTATGATTGGAAAAACCATGTCATCGGAGAATTCATCCGAAAAAGTATTGAAAGAGGAACCCTAACATCGAATGCCATCGTCGTTCTGCCTCAGCTCTCACTATCCTGCAAATTTCGGGTTCGTCTCATCGTCATCGATTGCCAATTGGATTGGCGCCGAGATCTAGCTGGCCGTAGACAGCCACAGTCGCCGATCAATCAGTAGAGAATGATGAAGCTGCAAACATACGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATCGTTTCTTTCTTGGGGTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTATAACTCAATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAGTGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCCGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAACAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAGCAGGAACCACAAATTCATCTGCACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGAGTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACAAGCCCCCAATGAACAACCGCAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTATAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCATCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAGAGGATGGTGAGATAGAAGAAATGTGCATAATTATAATGTGTAATAATACAAGACTGCAGATTCAGAATGATATAGATATCTCTTGTATACGGAAGATGTACTTGGTAAATTTTTAGAGGCAGTCTTCTTCCCATTTGCATAGCCGTGTTTGCTGGTTTGGTTGGTTGTAAATGCTGAATTTGGTGTCTCTTTTGCAGCAATTATGCGACGGTCAAAAAAGAATATTGAAAGTTCTTTCTAGCAGAAGAAGATAGTTTATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGATGCTTTTTGAAAAGCACTCCAATTCACATGCGCATGAGTTAAAGTTAAAGCATTAATTGTTTGGAAGTGGACATTTAGAAAAGGTCCAAGTGTTGTG

Coding sequence (CDS)

ATGATGAAGCTGCAAACATACGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATCGTTTCTTTCTTGGGGTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTATAACTCAATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAGTGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCCGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAACAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAGCAGGAACCACAAATTCATCTGCACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGAGTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACAAGCCCCCAATGAACAACCGCAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTATAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCATCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAGAGGATGGTGAGATAG

Protein sequence

MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTTNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSSSSVSDSQAPGEIERMVR

Homology

[Close]

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot
Match: Q6NPT7 (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=3702 GN=HRD1B PE=2 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 4.6e-172
Identity = 335/538 (62.27%), Postives = 397/538 (73.79%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTGGHQGLQSDANQQGAGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST  G++G   ++ QQG GT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           ++S  QGSS +  A +N+S H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 460

[Close]

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot
Match: Q9LW77 (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=3702 GN=HRD1A PE=2 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 3.0e-171
Identity = 337/537 (62.76%), Postives = 401/537 (74.67%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++    Q      +QQG  ++
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 -NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQ 420
            N  ++ SS  GV+ ++LS H AR++AAA+AAS+Y KS VYP A+T+ WS G   VP   
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSG---VP--- 420

Query: 421 RPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLG 480
                        EQ   E  Q  P    P   S                          
Sbjct: 421 -----------GTEQVSTEPDQTLPQHNLPVENSH------------------------- 480

Query: 481 SSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
           +  N+S ++LE   + LE  +EIL+++L  L   K E    +AGE + KGKSVA ++
Sbjct: 481 AYANMSETKLEEMRKSLETHLEILRNRLHFLETRKPE----SAGEPENKGKSVADAA 491

[Close]

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot
Match: Q5Z880 (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.4e-159
Identity = 310/515 (60.19%), Postives = 383/515 (74.37%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSV+FL MV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LF  NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILAT+ VSTFVKYIFYVSD+LMEGQWE+K VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTT----GGHQGLQSDANQQG 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   T     G H G+Q      G
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQP---VPG 360

Query: 361 AGTTNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVP 420
            GT  S          AG+N+S  QA++ AAA+AAS+Y +S+ YP A+ L     Y+  P
Sbjct: 361 NGTPGSER-------AAGENISRRQAKLEAAASAASLYGRSFAYPPANNL---NRYSTPP 420

Query: 421 QVQRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTD 480
           Q       ++N   SGE + + Q      T  P+  +F               G ++   
Sbjct: 421 Q------STSNGPQSGEASTSNQSPKGHATADPSAPTFY------------ARGAVS--- 480

Query: 481 GLGSSQNISGSQLEAQERFLEQQIEILKDQLQLLR 512
            + +++ +  S  +A E  ++ QIE+L+ QLQ+ +
Sbjct: 481 SVTTTRELESSLQKAYENAIKSQIEMLQIQLQMFQ 481

[Close]

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot
Match: Q803I8 (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 7.3e-69
Identity = 145/353 (41.08%), Postives = 208/353 (58.92%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  + H R++S +  L V+D LF  ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDA 353
           T AKKL C H+FH  CLRSW +RQ TCPTCR  V+     + T      Q+ A
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPPAAQAPA 352

[Close]

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot
Match: Q86TM6 (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-68
Identity = 141/331 (42.60%), Postives = 198/331 (59.82%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  L H RIVS +  L +LD LF  ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL
Match: A0A6J1FNJ3 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447399 PE=4 SV=1)

HSP 1 Score: 978.4 bits (2528), Expect = 1.3e-281
Identity = 516/556 (92.81%), Postives = 531/556 (95.50%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDAN QG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQGS GT  AGD+L HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQAPNEQ QYFPFTGGPANLSFTQIPQNLF+PFQPREGT+N+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS   GE ER V
Sbjct: 541 SSVSDSHPHGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL
Match: A0A6J1KWZ5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499418 PE=4 SV=1)

HSP 1 Score: 974.9 bits (2519), Expect = 1.4e-280
Identity = 515/556 (92.63%), Postives = 529/556 (95.14%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+LSHHQ+RV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQA NEQ QYFPF GGPANLS+TQIPQNLFVPFQPREGT+N+TDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
            QNISGSQLEAQERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS  PGE ER V
Sbjct: 541 SSVSDSHPPGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL
Match: A0A6J1CJF5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 974.2 bits (2517), Expect = 2.4e-280
Identity = 517/558 (92.65%), Postives = 533/558 (95.52%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGH G   DANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQ SSGTGVAGDNLSHHQARV+AAAAAASIYEKSYVYP ASTLVWSPGYAVVPQ QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNNIE +GEQAPN QPQYFPFTGGPANLSFTQ PQNLFVPFQPREG++N+TDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQN+SG  LE QERF++QQIE+L+ QLQLLR PKVEES+R AGEADKKGKSVASS PSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTR-AGEADKKGKSVASSPPSSS 540

Query: 541 SSVSDSQAP-GEIERMVR 558
           SSVS+S  P GEIERMVR
Sbjct: 541 SSVSESHPPAGEIERMVR 556

[Close]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL
Match: A0A6J1CI55 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.2e-278
Identity = 516/558 (92.47%), Postives = 532/558 (95.34%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGH G   DANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQ--GTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQ SSGTGVAGDNLSHHQARV+AAAAAASIYEKSYVYP ASTLVWSPGYAVVPQ QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNNIE +GEQAPN QPQYFPFTGGPANLSFTQ PQNLFVPFQPREG++N+TDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQN+SG  LE QERF++QQIE+L+ QLQLLR PKVEES+R AGEADKKGKSVASS PSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTR-AGEADKKGKSVASSPPSSS 540

Query: 541 SSVSDSQAP-GEIERMVR 558
           SSVS+S  P GEIERMVR
Sbjct: 541 SSVSESHPPAGEIERMVR 554

[Close]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL
Match: A0A1S4E231 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 GN=LOC103495570 PE=4 SV=1)

HSP 1 Score: 958.7 bits (2477), Expect = 1.0e-275
Identity = 507/558 (90.86%), Postives = 528/558 (94.62%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTT GH G+QSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQG+SGTGV   NLSHHQARVRAAAAAASIYEKSYVYP ASTLVWS GYAVVPQV+R
Sbjct: 361 SSSAQGTSGTGVTNANLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN E++GEQ+PN  PQYF F GGP+NLSFTQ PQN+FVPFQPREGT N+ + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVA-SSSPSS 540
           S N+SGSQLEAQE+FL+QQIE L++QLQLLRKPKVEESSR A E DKKGKS+A S SPS+
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPSPSA 540

Query: 541 SSSVSDSQAPGEIERMVR 558
           S S SDS  PGE ER+VR
Sbjct: 541 SLSSSDSHPPGETERVVR 558

[Close]

BLAST of Lcy11g003480 vs. NCBI nr
Match: KAG6600225.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 985.3 bits (2546), Expect = 2.1e-283
Identity = 520/554 (93.86%), Postives = 533/554 (96.21%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQGS GT  AGD+LSHHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQAPNEQ QYFPFTGGPANLSFTQIPQNLFVPFQPREGT+N+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 555
           SSVSDS  PGE ER
Sbjct: 541 SSVSDSHPPGETER 553

[Close]

BLAST of Lcy11g003480 vs. NCBI nr
Match: KAG7030884.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 983.8 bits (2542), Expect = 6.1e-283
Identity = 520/556 (93.53%), Postives = 533/556 (95.86%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQGS GT  AGD+LSHHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQAPNEQ QYFPFTGGPANLS TQIPQNLFVPFQPREGT+N+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSCTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS  PGE ER V
Sbjct: 541 SSVSDSHPPGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. NCBI nr
Match: XP_023531768.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo] >XP_023531774.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 979.5 bits (2531), Expect = 1.2e-281
Identity = 518/556 (93.17%), Postives = 531/556 (95.50%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQG QSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQGS GTG  GD+LSHHQARV+AAAAAASIYEKSYVYPFA+TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQA NEQ QYFPFT GPANLSFTQIPQNLFVPFQPREGT+N+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQN SGSQLEAQERFL+QQIEIL+DQLQLLRK KVE+SS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS  PGE ER V
Sbjct: 541 SSVSDSHPPGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. NCBI nr
Match: XP_022942315.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_022942316.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata])

HSP 1 Score: 978.4 bits (2528), Expect = 2.6e-281
Identity = 516/556 (92.81%), Postives = 531/556 (95.50%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDAN QG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SSAQGS GT  AGD+L HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQAPNEQ QYFPFTGGPANLSFTQIPQNLF+PFQPREGT+N+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS   GE ER V
Sbjct: 541 SSVSDSHPHGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. NCBI nr
Match: XP_023006862.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima] >XP_023006934.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 974.9 bits (2519), Expect = 2.9e-280
Identity = 515/556 (92.63%), Postives = 529/556 (95.14%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST GGHQGLQSDANQQG GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+LSHHQ+RV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLGS 480
           PL DSNN+E  GEQA NEQ QYFPF GGPANLS+TQIPQNLFVPFQPREGT+N+TDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
            QNISGSQLEAQERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIERMV 557
           SSVSDS  PGE ER V
Sbjct: 541 SSVSDSHPPGETERTV 555

[Close]

BLAST of Lcy11g003480 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 605.9 bits (1561), Expect = 3.2e-173
Identity = 335/538 (62.27%), Postives = 397/538 (73.79%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTGGHQGLQSDANQQGAGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST  G++G   ++ QQG GT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           ++S  QGSS +  A +N+S H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 460

[Close]

BLAST of Lcy11g003480 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 603.2 bits (1554), Expect = 2.1e-172
Identity = 337/537 (62.76%), Postives = 401/537 (74.67%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTGGHQGLQSDANQQGAGTT 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++    Q      +QQG  ++
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 -NSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQ 420
            N  ++ SS  GV+ ++LS H AR++AAA+AAS+Y KS VYP A+T+ WS G   VP   
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSG---VP--- 420

Query: 421 RPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGLG 480
                        EQ   E  Q  P    P   S                          
Sbjct: 421 -----------GTEQVSTEPDQTLPQHNLPVENSH------------------------- 480

Query: 481 SSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
           +  N+S ++LE   + LE  +EIL+++L  L   K E    +AGE + KGKSVA ++
Sbjct: 481 AYANMSETKLEEMRKSLETHLEILRNRLHFLETRKPE----SAGEPENKGKSVADAA 491

[Close]

BLAST of Lcy11g003480 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.9e-133
Identity = 280/538 (52.04%), Postives = 335/538 (62.27%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINL                 
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINL----------------- 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
                                                                  LHW+A
Sbjct: 61  ------------------------------------------------------GLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTGGHQGLQSDANQQGAGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST  G++G   ++ QQG GT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           ++S  QGSS +  A +N+S H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 389

Query: 421 QRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 389

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 389

[Close]

BLAST of Lcy11g003480 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 349.4 bits (895), Expect = 5.5e-96
Identity = 201/359 (55.99%), Postives = 238/359 (66.30%), Query Frame = 0


Query: 180 MILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTY 239
           MILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM Y
Sbjct: 1   MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 60

Query: 240 GVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM 299
           G+PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEM
Sbjct: 61  GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 120

Query: 300 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTGGHQGLQSDANQQGAG 359
           T AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST  G++G   ++ QQG G
Sbjct: 121 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTG 180

Query: 360 TTNSSAQGSSGTGVAGDNLSHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQ 419
           T++S  QGSS +  A +N+S H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ
Sbjct: 181 TSSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ 240

Query: 420 VQRPLPDSNNIESSGEQAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTINHTDG 479
                                                                       
Sbjct: 241 ------------------------------------------------------------ 281

Query: 480 LGSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 537
                    +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 301 ---------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 281

[Close]

BLAST of Lcy11g003480 vs. TAIR 10
Match: AT4G25230.1 (RPM1 interacting protein 2 )

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-19
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 25  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 84
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 85  L------MEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 144
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 145 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFE----YMILATTAVS 204
            R+ S L  +  +D      SL  YN+I S +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 205 TFVKYIF----------YVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 264
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 265 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 324
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 325 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 331
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

The following BLAST results are available for this feature:

BLAST of Lcy11g003480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPT7	4.6e-172	62.27	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=370...	[more]
Q9LW77	3.0e-171	62.76	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=370...	[more]
Q5Z880	3.4e-159	60.19	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
Q803I8	7.3e-69	41.08	E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2	[more]
Q86TM6	2.1e-68	42.60	E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=...	[more]

BLAST of Lcy11g003480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNJ3	1.3e-281	92.81	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=...	[more]
A0A6J1KWZ5	1.4e-280	92.63	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1CJF5	2.4e-280	92.65	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica c...	[more]
A0A6J1CI55	2.2e-278	92.47	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica c...	[more]
A0A1S4E231	1.0e-275	90.86	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 G...	[more]

BLAST of Lcy11g003480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600225.1	2.1e-283	93.86	ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosper...	[more]
KAG7030884.1	6.1e-283	93.53	ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp....	[more]
XP_023531768.1	1.2e-281	93.17	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pe...	[more]
XP_022942315.1	2.6e-281	92.81	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_...	[more]
XP_023006862.1	2.9e-280	92.63	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita max...	[more]

BLAST of Lcy11g003480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65040.2	3.2e-173	62.27	RING/U-box superfamily protein	[more]
AT3G16090.1	2.1e-172	62.76	RING/U-box superfamily protein	[more]
AT1G65040.3	1.9e-133	52.04	RING/U-box superfamily protein	[more]
AT1G65040.1	5.5e-96	55.99	RING/U-box superfamily protein	[more]
AT4G25230.1	2.4e-19	28.28	RPM1 interacting protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 486..506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..375
None	No IPR available	PANTHER	PTHR22763:SF174	SUBFAMILY NOT NAMED	coord: 1..465
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 1..465
None	No IPR available	CDD	cd16479	RING-H2_synoviolin	coord: 289..330 e-value: 8.03543E-28 score: 103.532
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 272..336
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 292..329 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 291..330 e-value: 1.2E-10 score: 41.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 292..330 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 264..336 e-value: 5.3E-23 score: 82.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g003480.1	Lcy11g003480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity