Lcy11g003170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g003170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	GTP-binding protein YPTM2
Location	Chr11: 3041765 .. 3043553 (-)
RNA-Seq Expression	Lcy11g003170
Synteny	Lcy11g003170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGCCTCTCCATTTCCTTCTCTCCTCATCACGAAAGAGAATCTGACAGAAAAAAAAAAAAAGAAAGAAAATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGACATCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGCGGAGATGGTGAAGCGAGAAAAAGCGCGAGTCAAGTTCGCCGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGGTACGAGAAGATCGTAATGCATTTTGATTTCGAATTCTGCTCCTTGGAATCTTTCTTTCCCGCCATTGATTTCCCGGGAAAATGTTCTGTAACTGAAAGTTATCCACTAACCCAACAAATTAATTATCCGATATAAGGAAAAAGAAAGGTTGGTTTTTTTTTTTTTTTTTTCTCTAACAACATTTGAGGAGGGAAATTCGAAACTCTGACATTTTGGTTCGTCGGGTTATATTCACTTTGACAAAAAAAATGTTAAATTGAAATTTTAGTCATTGAACTTTTAAAGTTTGTATTTATTTGGTCTTGAACTTTAAAAAAATATCTCATAAATTCTCAAATTTTTTAATTTTTGTTCGATAGATGTATGGATTTTCAATTTTGTCGAGATTATTGGAGACTATTACACATTTTTAAAGTTAAGGACTATTATACATTTTTAAGTTTAAAGACTATTGCACGCAAAAAAATTGAAAGTTTGTGTACTATTAGACATTTTTAAGAATTCAATGTCCAAATAAACACAAATTTCGAGAACTAAACTTATAATTTACTTTTTAAAATATTTTCAAAATTTGTAACCTAAACCTAACACAATTGGTTAATGCACATATCATTGACAAAGAGATTAGTACTTTGAATCTCTATCCCACACATATCTGTTCTTTAACAAAAGGAAAAGATTTTCAAAATCTAAGCTAAATTTTAAAAACTAAAAAATGTTTATGAAATTTAGCTTATAATTCAAGCATGCTTTTAAAAACAAAGTGAAGAGTATATTAGGAAAATTGTAAGCTAACCAACATATTTAAAAAGGGAAAATAACACAAAAAATGAAAGCATTATAAAAAAAGGGCTTAGATTTCTAATTTTGTGTTTTATAGGTCTCCAAACAACTTAGACACGAAAACTGGAAGTCCAAGTTTTACCAGACACTTTTTAAAAATTCAACCACGATCAATTCACCCAAGTTATAAACTAGGACCAAATTCATAATTTAATGAAAAAATCATTTATATAAATTTGGCCAAACTAGACTATAGTTTGTTTCTTAGTTTTTTTTTTTTTTTTTTTTTATTGCAATTGTTTTTTAAAGAAGTTTTAGACAATTGCCTCTAGTGTGTTTCATTTGTTTGGTCAATGGTTTTTTATGTGCAGATATAGATGTGGGGATGAGAGGGGAAACAATGGCAGCAAGAATAGAAGGATTGAACATTGAAGGAGAAATTGAGAGTGAAATTGATGGTACCCAAAATGGGGCTCTCCCGATTTTGGACACGACTTCCTTTGACACTTCGAAACAACTTCACGATATCTCTACTTTGAGAATCAAAAAACTCAAGTGACCCTCTCCATCTCTATTGATCTCTCCTTAAATCTAATACTATTATAATACACATCATGCAAAATATATAACTAGTTGTGCTAAAGTGTTATAAATAAAGTGGATCAACAATAT

mRNA sequence

CTCGGCCTCTCCATTTCCTTCTCTCCTCATCACGAAAGAGAATCTGACAGAAAAAAAAAAAAAGAAAGAAAATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGACATCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGCGGAGATGGTGAAGCGAGAAAAAGCGCGAGTCAAGTTCGCCGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGATATAGATGTGGGGATGAGAGGGGAAACAATGGCAGCAAGAATAGAAGGATTGAACATTGAAGGAGAAATTGAGAGTGAAATTGATGGTACCCAAAATGGGGCTCTCCCGATTTTGGACACGACTTCCTTTGACACTTCGAAACAACTTCACGATATCTCTACTTTGAGAATCAAAAAACTCAAGTGACCCTCTCCATCTCTATTGATCTCTCCTTAAATCTAATACTATTATAATACACATCATGCAAAATATATAACTAGTTGTGCTAAAGTGTTATAAATAAAGTGGATCAACAATAT

Coding sequence (CDS)

ATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGACATCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGCGGAGATGGTGAAGCGAGAAAAAGCGCGAGTCAAGTTCGCCGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGATATAGATGTGGGGATGAGAGGGGAAACAATGGCAGCAAGAATAGAAGGATTGAACATTGAAGGAGAAATTGAGAGTGAAATTGATGGTACCCAAAATGGGGCTCTCCCGATTTTGGACACGACTTCCTTTGACACTTCGAAACAACTTCACGATATCTCTACTTTGAGAATCAAAAAACTCAAGTGA

Protein sequence

MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARVKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQNGALPILDTTSFDTSKQLHDISTLRIKKLK

Homology

[Close]

BLAST of Lcy11g003170 vs. ExPASy TrEMBL
Match: A0A6J1CG79 (uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011394 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.0e-49
Identity = 113/148 (76.35%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           MYRS SWNRFSDEYYS SSP+   +SKP QAL LSSSF  NELPTNDPVA MVKREKARV
Sbjct: 1   MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALGLSSSFGANELPTNDPVAVMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFAETAVHVIPLVLLLCAIVLWFFSNP+IDVGMRGET+AARIEGL IEGE+ESEI     
Sbjct: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIDVGMRGETIAARIEGLTIEGELESEI----- 120

Query: 121 GALPILDTTSFDTSKQLHDIST-LRIKK 148
              PILDT S   S QL D S+ L+IK+
Sbjct: 121 ---PILDTASSHHSNQLDDPSSILKIKR 140

[Close]

BLAST of Lcy11g003170 vs. ExPASy TrEMBL
Match: A0A6J1JHB4 (uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49
Identity = 108/148 (72.97%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA +S P QALRL+SSFDGNE PT+ P  EMVKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+IDVGMR + MAARIEGLN+EGEIE E  G QN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 121 EALPILDSTP----------STLKIKRL 138

[Close]

BLAST of Lcy11g003170 vs. ExPASy TrEMBL
Match: A0A6J1FWX5 (uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC111447711 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.0e-46
Identity = 105/148 (70.95%), Postives = 117/148 (79.05%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSP PA +S PGQALRL  SFDGNE PT+ P  E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+IDVGMR + MAA IEGLN+EGEIE E  G QN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQN 120

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 121 EALPILDSTP----------STLKIKRL 136

[Close]

BLAST of Lcy11g003170 vs. ExPASy TrEMBL
Match: A0A0A0KZ80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 99/141 (70.21%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFD--GNELPTNDPVAEMVKREKA 60
           MYRS SWNRFSDEYYSHS    AP+SKPGQ+LRLSSSFD   NELPTNDPV+EMVKREKA
Sbjct: 1   MYRSVSWNRFSDEYYSHS----APSSKPGQSLRLSSSFDHGNNELPTNDPVSEMVKREKA 60

Query: 61  RVKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGT 120
           RVKFAETAVHVIP VLL+CAIVLWFFSNPD++  MRG T    I  L +EGE ES    T
Sbjct: 61  RVKFAETAVHVIPFVLLICAIVLWFFSNPDVE--MRGATTTGIIRSLTLEGEFES----T 120

Query: 121 QNGALPILDTTSFDTSKQLHD 140
           Q  ALP  D    D S+ LHD
Sbjct: 121 QTEALPTFDGPFSDASR-LHD 130

[Close]

BLAST of Lcy11g003170 vs. ExPASy TrEMBL
Match: A0A1S4E0H1 (uncharacterized protein LOC103494452 OS=Cucumis melo OX=3656 GN=LOC103494452 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.0e-40
Identity = 97/144 (67.36%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFD--GNELPTNDPVAEMVKREKA 60
           MYRSASWNRFSDEYYSHS    AP+SKPGQ+LRLSSSFD   NELP NDPV EMVKREKA
Sbjct: 1   MYRSASWNRFSDEYYSHS----APSSKPGQSLRLSSSFDQGNNELPMNDPVTEMVKREKA 60

Query: 61  RVKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGT 120
           RVKFAE AVHVIP VLL+C IVLWFFSNP++DV MRG TM + I GL +EGEIES    T
Sbjct: 61  RVKFAENAVHVIPFVLLICGIVLWFFSNPEVDVEMRGGTMRSTIVGLTLEGEIES----T 120

Query: 121 QNGALPILDTTSFDTSKQLHDIST 143
           Q    P         S + H  ST
Sbjct: 121 QKEETPPTLNRPLSHSSEPHHTST 136

[Close]

BLAST of Lcy11g003170 vs. NCBI nr
Match: XP_022140815.1 (uncharacterized protein LOC111011394 isoform X1 [Momordica charantia])

HSP 1 Score: 204.5 bits (519), Expect = 6.3e-49
Identity = 113/148 (76.35%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           MYRS SWNRFSDEYYS SSP+   +SKP QAL LSSSF  NELPTNDPVA MVKREKARV
Sbjct: 1   MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALGLSSSFGANELPTNDPVAVMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFAETAVHVIPLVLLLCAIVLWFFSNP+IDVGMRGET+AARIEGL IEGE+ESEI     
Sbjct: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIDVGMRGETIAARIEGLTIEGELESEI----- 120

Query: 121 GALPILDTTSFDTSKQLHDIST-LRIKK 148
              PILDT S   S QL D S+ L+IK+
Sbjct: 121 ---PILDTASSHHSNQLDDPSSILKIKR 140

[Close]

BLAST of Lcy11g003170 vs. NCBI nr
Match: XP_022986879.1 (uncharacterized protein LOC111484483 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 108/148 (72.97%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA +S P QALRL+SSFDGNE PT+ P  EMVKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+IDVGMR + MAARIEGLN+EGEIE E  G QN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 121 EALPILDSTP----------STLKIKRL 138

[Close]

BLAST of Lcy11g003170 vs. NCBI nr
Match: KAG6600205.1 (hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA +S PGQALRL  SFDGNE PT+ P  E+VKREKARV
Sbjct: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 213

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+ID GMR + MAARIEGLN+EGEIE E  G QN
Sbjct: 214 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 273

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 274 EALPILDSTP----------STLKIKRL 289

[Close]

BLAST of Lcy11g003170 vs. NCBI nr
Match: KAG7030866.1 (hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA +S PGQALRL  SFDGNE PT+ P  E+VKREKARV
Sbjct: 70  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 129

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+ID GMR + MAARIEGLN+EGEIE E  G QN
Sbjct: 130 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 189

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 190 EALPILDSTP----------STLKIKRL 205

[Close]

BLAST of Lcy11g003170 vs. NCBI nr
Match: XP_022942780.1 (uncharacterized protein LOC111447711 [Cucurbita moschata])

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 105/148 (70.95%), Postives = 117/148 (79.05%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVAEMVKREKARV 60
           M+RS SWNRFSDEYYS SSP PA +S PGQALRL  SFDGNE PT+ P  E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQN 120
           KFA TAVHVIPLVL+LCAI+LWFFSNP+IDVGMR + MAA IEGLN+EGEIE E  G QN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQN 120

Query: 121 GALPILDTTSFDTSKQLHDISTLRIKKL 149
            ALPILD+T           STL+IK+L
Sbjct: 121 EALPILDSTP----------STLKIKRL 136

[Close]

BLAST of Lcy11g003170 vs. TAIR 10
Match: AT5G61630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 5.7e-32
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSS---SFDGNELPT-NDPVAEMVKRE 60
           MYRSASWNR  ++Y          +S P + L + S     D NELP+ N+P  EMVK+E
Sbjct: 1   MYRSASWNRVPEDY----------SSAPPKGLWMGSVIGPLDENELPSYNNPPEEMVKKE 60

Query: 61  KARVKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEID 120
           K+R KFAE A+H+IP VLL CA+VLW FSNPD+DVGMR E++AA+IEGL IEG+I+++ D
Sbjct: 61  KSRAKFAENAIHIIPFVLLACALVLWLFSNPDVDVGMREESIAAKIEGLTIEGDIDNDSD 117

Query: 121 GTQNGAL 124
           GTQ G L
Sbjct: 121 GTQTGFL 117

[Close]

BLAST of Lcy11g003170 vs. TAIR 10
Match: AT5G07490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61630.1); Has 50 Blast hits to 50 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-30
Identity = 69/124 (55.65%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNELPTNDPVA-EMVKREKAR 60
           MYRSASWNR +++Y   S P  AP         L    D +E    DP   EM K+EK+R
Sbjct: 1   MYRSASWNRVTEDY---SVPWSAPKG-------LWKGLDEDEPAPYDPTGQEMTKKEKSR 60

Query: 61  VKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARIEGLNIEGEIESEIDGTQ 120
            KFAE AVH+IP VLL CA+VLWFFSNPD+DVG++G+++AARIEGL IEG+I+++ DGTQ
Sbjct: 61  TKFAENAVHIIPFVLLACALVLWFFSNPDVDVGVKGDSIAARIEGLTIEGDIDNDSDGTQ 114

Query: 121 NGAL 124
            G L
Sbjct: 121 TGFL 114

[Close]

BLAST of Lcy11g003170 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNE----LPTNDPVAEMVKRE 60
           M RSAS +  SD+  S +SPSP+P S P    R+ +S D ++    LP  DP +   K+ 
Sbjct: 1   MRRSASASIVSDQ-LSANSPSPSP-SPP----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61  KARVKFAETAVHVIPLVLLLCAIVLWFFSNPDIDVGMRGETMAARI 103
           K+R + AE A+H IP+VL+LCA++LW FSNP   +   G+  +  +
Sbjct: 61  KSRFRSAENAIHFIPIVLILCAVILWMFSNPGNQIQFLGDKSSVHV 100

[Close]

BLAST of Lcy11g003170 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-11
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNE----LPTNDPVAEMVKRE 60
          M RSAS +  SD+  S +SPSP+P S P    R+ +S D ++    LP  DP +   K+ 
Sbjct: 1  MRRSASASIVSDQ-LSANSPSPSP-SPP----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 KARVKFAETAVHVIPLVLLLCAIVLWFFSNP 88
          K+R + AE A+H IP+VL+LCA++LW FSNP
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

[Close]

BLAST of Lcy11g003170 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-11
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MYRSASWNRFSDEYYSHSSPSPAPTSKPGQALRLSSSFDGNE----LPTNDPVAEMVKRE 60
          M RSAS +  SD+  S +SPSP+P S P    R+ +S D ++    LP  DP +   K+ 
Sbjct: 1  MRRSASASIVSDQ-LSANSPSPSP-SPP----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 KARVKFAETAVHVIPLVLLLCAIVLWFFSNP 88
          K+R + AE A+H IP+VL+LCA++LW FSNP
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

The following BLAST results are available for this feature:

BLAST of Lcy11g003170 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g003170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG79	3.0e-49	76.35	uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JHB4	6.7e-49	72.97	uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483...	[more]
A0A6J1FWX5	7.0e-46	70.95	uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A0A0KZ80	1.2e-40	70.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1	[more]
A0A1S4E0H1	2.0e-40	67.36	uncharacterized protein LOC103494452 OS=Cucumis melo OX=3656 GN=LOC103494452 PE=...	[more]

BLAST of Lcy11g003170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140815.1	6.3e-49	76.35	uncharacterized protein LOC111011394 isoform X1 [Momordica charantia]	[more]
XP_022986879.1	1.4e-48	72.97	uncharacterized protein LOC111484483 [Cucurbita maxima]	[more]
KAG6600205.1	1.7e-46	71.62	hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030866.1	1.7e-46	71.62	hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022942780.1	1.4e-45	70.95	uncharacterized protein LOC111447711 [Cucurbita moschata]	[more]

BLAST of Lcy11g003170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61630.1	5.7e-32	55.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G07490.1	5.3e-30	55.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G35658.2	3.8e-12	40.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.1	4.2e-11	46.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.3	4.2e-11	46.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR34189	TRANSMEMBRANE PROTEIN	coord: 1..141
None	No IPR available	PANTHER	PTHR34189:SF4	TRANSMEMBRANE PROTEIN	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g003170.1	Lcy11g003170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane