Lcy11g003160 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g003160
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	pre-mRNA-splicing factor CWC25 homolog
Location	Chr11: 3036960 .. 3039507 (-)
RNA-Seq Expression	Lcy11g003160
Synteny	Lcy11g003160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATTTTCTTCTGATCATTTGGGCCTCAATCAGATTACGAGTGGGCCGAAAAAGTCGCAGGCTAGGAGAGGCGGCGGCGACGACGATCCGCGTCCTCACAAAACCACGGCGCCAGTGGCAGCAAATCCGATTCTCAATCTGAAAATCGGTTGGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACGGGCAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAAAAGCACGAGGCTGAGCAGAAGAAGTTGGACGAGCTCCGCAAGCAGATCCAGGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTCCAAGAACAGGCCGGCCTCATTCCGTATGTTTTATCTTCTATCTTCTTGTTAACGGATTGAATTATGTATTTGATTCGTAGTCTGAGTTTTGAATCCGATTCGATCTCTGAATAGACGAGGATTAGGGTTACTGCCGAGGCGATGGTTAGGGTTTATTTTGTTCGATTGGTTTGACTAATATTTGAATTTTTTACTATTTGGCGTTTCAGGAAGCAGGAGAGATTGGATTTTCTTTATGAATCAGGTTTGGCAGTAGGGAAAGGTAGCAATTCCGATGGATTTAAGAGTCTGGAAACCCTACCTAGTACATCTAGTGCTGCGGCCGCAACTGAACCTTCTAGTTCCAAGGTACTTTTACACTCCTTGCCTTTGTTCTGTTAATTTGTGTGCTTTGGCTATCTCTTCGTAGTGCTCAATTATGATCTTGTTGCATTTTTGTTCTGTTTCTGCAGGAAGCCGCCGCTGTACCCGGAGCTCTGTTTGAGGATAAGCCTCATTCTGCCAATGATGCTTGGAGGAAACTTCATTCTGATCCTTTGCTTATCATTCGGCAGCGGGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTATTCAGATGGCTATGATTCGCAAAACTGTAAGTTCACTTTTTTTTTTTTTTCCTTTCTTCCTTACTGTTTTATCTTCTCCTTATATCGCTGTAAGCCCTATTAAGTTCTAGGACTTTTCTTGTTATAACATGGGCTGTGGAAATTAGATGGAAATATCCTTCTTTTGTTCATTATTATTTGTCTTGGGAAATTCCCTAAACTTTCCTGTTAGCTTCTCCGTGGACACTTACTTTGTGGTAGAGAAAGCTGGAGGCTTATCTAAATTCTGAGTTATCCTTTTGAGTTCATGTAATGGATTTCTCTGCATTTCTCACCCTTTTGGATGGTGCTAAAGATGAATCTATGATCAGAAAGTTTCCTTTGATATATCTTCATGACTAGTCAATTGTGGGAAAAGTGAAAGCTGTTAAAGAATTCCCATGACAAATGATTAACTGCCATATTAAGAATTTTCTGCTACTGTAGTTATCGCTTTTGTGATAGAATCATATTATGCAACAAGCTGGCCCTTGTTTGATTTGAAGAATGGATCTGAGGGTTTTTTCTTGTAATATATATTTATAGGTCGAAGGAGAAAAACACAAGGAAAAGAATCCGGATGAAAAAAGAGAACGGAAGAAGCACCGCCATAGTAAATCTAAACGTCAGAAAGATTTTTCTCCAGAAAGAGATTATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGATCGTGATAAGAGTTCAAAACACGAAGACCATTCTCATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGATGATCGTGACAAGAGTTCAAAATATGATGACCATTCTTATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAGTGAGAAGGATCATGACAGGGGCTCAAAATATGCCGCACAAACGACCTATGATCAGTCAGATCGAAAGTCGTTCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAGAAGAGACAGAGATTCTTATGCTAACAATGAAAAGGACAGCAGAAGAGTGGGGGAATTAAAATCTTATGAATCCAATGCTTCTGAAACTCCTCACGAATCACGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCTGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGAAGGCAGCCGAGGACGATGCACTGGAAGCCAAACTAAATGCTGCACCCTCAAGCAGAAATTTCTTGGACTCTGCTCAGAAACGCATGTACGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGCCGTAGGACATACTATTCACAGGGTAAATCTGAAATCGAAGCCAATGCTTTTCGACGATGATGCACATCGCTTGTATACTTTGCCTATGGTTTTATTGTATGACATCCTTATTTTAGTGTTCTGCTGTCTCCATGAAGAATTGCTTTAATTTATCAAATGTGATATGAGTCATGTTGATTAAATTCACATATGGTTGTTTAAATTGCTCTATTTTCTATTGATATTGATATTATGAACTTATCTTGCCTTGCTTCTTCTTCACACATGAAAGTTG

mRNA sequence

AAACATTTTCTTCTGATCATTTGGGCCTCAATCAGATTACGAGTGGGCCGAAAAAGTCGCAGGCTAGGAGAGGCGGCGGCGACGACGATCCGCGTCCTCACAAAACCACGGCGCCAGTGGCAGCAAATCCGATTCTCAATCTGAAAATCGGTTGGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACGGGCAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAAAAGCACGAGGCTGAGCAGAAGAAGTTGGACGAGCTCCGCAAGCAGATCCAGGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTCCAAGAACAGGCCGGCCTCATTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCAGGTTTGGCAGTAGGGAAAGGTAGCAATTCCGATGGATTTAAGAGTCTGGAAACCCTACCTAGTACATCTAGTGCTGCGGCCGCAACTGAACCTTCTAGTTCCAAGGAAGCCGCCGCTGTACCCGGAGCTCTGTTTGAGGATAAGCCTCATTCTGCCAATGATGCTTGGAGGAAACTTCATTCTGATCCTTTGCTTATCATTCGGCAGCGGGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTATTCAGATGGCTATGATTCGCAAAACTGTCGAAGGAGAAAAACACAAGGAAAAGAATCCGGATGAAAAAAGAGAACGGAAGAAGCACCGCCATAGTAAATCTAAACGTCAGAAAGATTTTTCTCCAGAAAGAGATTATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGATCGTGATAAGAGTTCAAAACACGAAGACCATTCTCATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGATGATCGTGACAAGAGTTCAAAATATGATGACCATTCTTATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAGTGAGAAGGATCATGACAGGGGCTCAAAATATGCCGCACAAACGACCTATGATCAGTCAGATCGAAAGTCGTTCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAGAAGAGACAGAGATTCTTATGCTAACAATGAAAAGGACAGCAGAAGAGTGGGGGAATTAAAATCTTATGAATCCAATGCTTCTGAAACTCCTCACGAATCACGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCTGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGAAGGCAGCCGAGGACGATGCACTGGAAGCCAAACTAAATGCTGCACCCTCAAGCAGAAATTTCTTGGACTCTGCTCAGAAACGCATGTACGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGCCGTAGGACATACTATTCACAGGGTAAATCTGAAATCGAAGCCAATGCTTTTCGACGATGATGCACATCGCTTGTATACTTTGCCTATGGTTTTATTGTATGACATCCTTATTTTAGTGTTCTGCTGTCTCCATGAAGAATTGCTTTAATTTATCAAATGTGATATGAGTCATGTTGATTAAATTCACATATGGTTGTTTAAATTGCTCTATTTTCTATTGATATTGATATTATGAACTTATCTTGCCTTGCTTCTTCTTCACACATGAAAGTTG

Coding sequence (CDS)

ATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACGGGCAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAAAAGCACGAGGCTGAGCAGAAGAAGTTGGACGAGCTCCGCAAGCAGATCCAGGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTCCAAGAACAGGCCGGCCTCATTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCAGGTTTGGCAGTAGGGAAAGGTAGCAATTCCGATGGATTTAAGAGTCTGGAAACCCTACCTAGTACATCTAGTGCTGCGGCCGCAACTGAACCTTCTAGTTCCAAGGAAGCCGCCGCTGTACCCGGAGCTCTGTTTGAGGATAAGCCTCATTCTGCCAATGATGCTTGGAGGAAACTTCATTCTGATCCTTTGCTTATCATTCGGCAGCGGGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTATTCAGATGGCTATGATTCGCAAAACTGTCGAAGGAGAAAAACACAAGGAAAAGAATCCGGATGAAAAAAGAGAACGGAAGAAGCACCGCCATAGTAAATCTAAACGTCAGAAAGATTTTTCTCCAGAAAGAGATTATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGATCGTGATAAGAGTTCAAAACACGAAGACCATTCTCATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGATGATCGTGACAAGAGTTCAAAATATGATGACCATTCTTATTCAGAAGATAGAAGGAGAAGAACTGATTATAAGAGTGAGAAGGATCATGACAGGGGCTCAAAATATGCCGCACAAACGACCTATGATCAGTCAGATCGAAAGTCGTTCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAGAAGAGACAGAGATTCTTATGCTAACAATGAAAAGGACAGCAGAAGAGTGGGGGAATTAAAATCTTATGAATCCAATGCTTCTGAAACTCCTCACGAATCACGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCTGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGAAGGCAGCCGAGGACGATGCACTGGAAGCCAAACTAAATGCTGCACCCTCAAGCAGAAATTTCTTGGACTCTGCTCAGAAACGCATGTACGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGCCGTAGGACATACTATTCACAGGGTAAATCTGAAATCGAAGCCAATGCTTTTCGACGATGA

Protein sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKRERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRRRRTDYKNERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSHDSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSRNFLDSAQKRMYGAEKGGSSTIEESIRRRTYYSQGKSEIEANAFRR

Homology

[Close]

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot
Match: Q9NXE8 (Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens OX=9606 GN=CWC25 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-13
Identity = 126/466 (27.04%), Postives = 213/466 (45.71%), Query Frame = 0


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLI-PKQE 67
           KK WH  +LRN+E VWKAEQKHEAE+KK++EL+++++EE+ R+E +   E  G +  K+E
Sbjct: 9   KKSWHPQTLRNVEKVWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKKKEE 68

Query: 68  RLDFLYE--SGLA------VGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGAL 127
           +LD++Y+   G+       +G+  +   F+ +E            E   S E   +PG++
Sbjct: 69  KLDWMYQGPGGMVNRDEYLLGRPIDKYVFEKME----------EKEAGCSSETGLLPGSI 128

Query: 128 FEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVE---GEKHK 187
           F   P  AN   D   K+  DPL IIR++E++    V NNP++M  I++ ++    +K K
Sbjct: 129 F--APSGANSLLDMASKIREDPLFIIRKKEEEKKREVLNNPVKMKKIKELLQMSLEKKEK 188

Query: 188 EKNPDEKRERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSED 247
           +K  ++K++ KKH+H                          R    D+SS  ++HS    
Sbjct: 189 KKKKEKKKKHKKHKH--------------------------RSSSSDRSSSEDEHSAGRS 248

Query: 248 RRRRTDYKNERDHKDDRDKSSKYDDHSYSEDRRRRTDYK---SEKDHDRGSKYAAQTTYD 307
           +++  +               +  D +         + K     K+H R    +      
Sbjct: 249 QKKMANSSPVLSKVPGYGLQVRNSDRNQGLQGPLTAEQKRGHGMKNHSRSRSSSHSPPRH 308

Query: 308 QSDRKSFKTNSHDSAERH-HDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHK 367
            S + + +  S D   R    RSR  R S  +N K +RR       E+  + +P   +  
Sbjct: 309 ASKKSTREAGSRDRRSRSLGRRSRSPRPSKLHNSKVNRR-------ETGQTRSPSPKKEV 368

Query: 368 HRRP-----ATKLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSR 427
           ++R        KLS EE   + +EM ++A+  EE+R   LK+ A+D+  E +L    S  
Sbjct: 369 YQRRHAPGYTRKLSAEELERKRQEMMENAKWREEERLNILKRHAKDEEREQRLEKLDSR- 425

Query: 428 NFLDSAQKRMYGAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR 449
              D         E   +S++E+ ++R  Y  Q  S  +E N  +R
Sbjct: 429 ---DGKFIHRMKLESASTSSLEDRVKRNIYSLQRTSVALEKNFMKR 425

[Close]

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot
Match: Q9DBF7 (Pre-mRNA-splicing factor CWC25 homolog OS=Mus musculus OX=10090 GN=Cwc25 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 7.8e-13
Identity = 131/462 (28.35%), Postives = 218/462 (47.19%), Query Frame = 0


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLI-PKQE 67
           KK WH  +LRN+E VWKAEQKHEAE+KK++EL+++++EE+ R+E +   E  G +  K+E
Sbjct: 9   KKSWHPQTLRNVEKVWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKKKEE 68

Query: 68  RLDFLYE--SGLA------VGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGAL 127
           +LD++Y+   G+       +G+  +   F+ +E            E   S E   +PG++
Sbjct: 69  KLDWMYQGPGGMVNRDEYLLGRPIDKYVFEKME----------EREAGCSSETGLLPGSI 128

Query: 128 FEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVE---GEKHK 187
           F   P  AN   D   K+  DPL IIR++E++    V NNP++M  I++ ++    +K K
Sbjct: 129 F--APSGANSLLDMASKIREDPLFIIRKKEEEKKREVLNNPVKMKKIKELLQMSLEKKEK 188

Query: 188 EKNPDEKRERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHD-RDKSSKHEDHSHSE 247
           +K  ++K++ +KH+H  S      S   D  S+  S ++         K   +       
Sbjct: 189 KKKKEKKKKHRKHKHRSS--SSGGSSSEDEQSQARSQKKMANSFPVLSKVPGYGLQVRDS 248

Query: 248 DRRR--RTDYKNERDHKDD-RDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTY 307
           DR R  +     +R  K++ R +SS    H+       +   K E+  DR S+  ++   
Sbjct: 249 DRNRGLQGSLGEQRAIKNNSRSRSSSPPRHA------SKKSTKEERPRDRRSRSPSR--- 308

Query: 308 DQSDRKSFKTNSHDSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHK 367
                                RSR  R S  +  K +R+  +  S +  A +  H S + 
Sbjct: 309 ---------------------RSRSPRPSKPHTSKVNRKERDSPSPKKEAYQRRHASGY- 368

Query: 368 HRRPATKLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPS-SRNFLD 427
                 KLS EE   + +EM ++A+  EE+R   LK+ A +D  E +L    S S  FL 
Sbjct: 369 ----TRKLSAEELERKRQEMMENAKWREEERLNTLKRHAREDEREHRLERLDSRSGKFLH 416

Query: 428 SAQKRMYGAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR 449
             +      E   +S++E+ ++R  +  Q  S  +E N  RR
Sbjct: 429 RMK-----LESASTSSLEDRVKRNIHSLQRTSVALEKNFMRR 416

[Close]

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot
Match: Q4X1D7 (Pre-mRNA-splicing factor cwc25 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cwc25 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-07
Identity = 124/413 (30.02%), Postives = 199/413 (48.18%), Query Frame = 0


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLIPKQER 67
           KK WH   LRN E VW  E++   E+K++++LR++ +EE++ QE + LQE +G   +  R
Sbjct: 8   KKSWHPSLLRNQERVWAEEKRALEERKRIEQLRREREEERQIQELQRLQEASGKGRQLNR 67

Query: 68  LDFLYES-GLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFEDKP-HS 127
           +D++Y++   A G  +       L             E    ++   V GA     P ++
Sbjct: 68  VDWMYQAPSSATGHYAEEMEGYLLGKRRIDGILLKNDESKKLEKGTDVVGANAAPPPVNN 127

Query: 128 ANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKH-KEKNPDEKRERKK 187
             D   K+ +DPLL I++REQ A            M++++V   +H ++K+ D  RER++
Sbjct: 128 PRDTMAKVMADPLLEIKKREQAAYEN---------MVKESVRRSQHIRDKDRDRDRERRR 187

Query: 188 HRHSKSK-RQKDFSPERD-YDSEDASPERQRRKH-DRDKSSKHEDHSHSEDRRR--RTDY 247
            R  + + R +D S  R  ++ EDA    + R H  R +S    D S   DR+R    DY
Sbjct: 188 DRGDRDRSRDRDRSHRRSRHEDEDAHRSHRHRSHRHRSRSPLSPDRS---DRKRGDDRDY 247

Query: 248 KNERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEK-DHDR-GSKYA-AQTTYDQSDRKSF 307
           ++ERD +DDR    ++  H   +DRR   D ++++ D DR  S+Y      YD S R+  
Sbjct: 248 RDERDRRDDR--RDEHRGHDRRDDRRSERDRRADRGDEDRHSSRYKDRDDRYDHSTRRRS 307

Query: 308 KTNSHDSAER--HHDRSRRDRDSYANNEKDSRRVGELKSYESN---ASETPHESRHKHRR 367
             +   S  R  H+   RR  D      +DSR     + Y  N    ++ P +S  + R 
Sbjct: 308 YADRSPSPRRGNHYYDRRRTEDRSDGYHRDSRNHDRPEFYRGNDRKVNKEPRDSNLRERS 367

Query: 368 PAT---------KLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAK 396
             T         K+ EEER  +L EM  +A   +E   +RL++ AE  A+E K
Sbjct: 368 SNTRDEVAGNKEKVLEEERKKKLAEMMSNA---DELEQKRLQRIAEVTAMEEK 403

[Close]

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot
Match: Q5B0I1 (Pre-mRNA-splicing factor cwc25 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cwc25 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.7e-05
Identity = 121/443 (27.31%), Postives = 192/443 (43.34%), Query Frame = 0


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLIPKQER 67
           KK WH   LRN E VW  E++   E+K++D+L+++  EE++ QE + LQE AG   + +R
Sbjct: 8   KKSWHPSLLRNQERVWAEEKRALEERKRIDQLKRERDEERQIQELQRLQESAGGTRQLQR 67

Query: 68  LDFLYE-------------SGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAV 127
           +D++Y+              G  +GK    DG              AAT P +   AA +
Sbjct: 68  VDWMYQEPSSASGHYAEEMEGYLLGK-RRIDGILLKNDESKKLEKGAATGPGA---AAGL 127

Query: 128 PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEK 187
           P  +     H+  D   K+ +DPLL IR+REQ A           AM++++V   + +E+
Sbjct: 128 PPVV-----HNTRDTMAKVMADPLLEIRKREQAAYE---------AMVKESVR-RREREQ 187

Query: 188 NPDEKRERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRR 247
             +  +ER++ R  + +R       R +     S  R R         +H D  H  DRR
Sbjct: 188 GRERHQERERERGHRHRRDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDREH--DRR 247

Query: 248 RRTDYKNERDHKDDRDKSSKYDDHSYSE--DRRRRTDYKSEKDHDRGSKYAAQTTYDQSD 307
              D   ER+++ +R   S   DH   E  DR  R       D  R  +       D+  
Sbjct: 248 SHRDRDGERENRVERVYHSSRRDHDRDERYDRAARRSASPRPDRRRDDR------RDRDQ 307

Query: 308 RKSFKTNSHDSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRP 367
            + ++ + +  + R   RS RDRD+ A     +R  G   S+  N +   +  +H     
Sbjct: 308 DQDYRRDRNSRSSRRDARSSRDRDTDAFGRDRNRDRG---SHSRNGNADANADQHAQE-- 367

Query: 368 ATKLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSR-----NFLD 427
                EE+R  RL EMQ +A+  E  R +R+   AE  ALE K       R      F+ 
Sbjct: 368 ----LEEQRKRRLAEMQANAQDMEATRRQRV---AEVTALEEKQREEDDKRRSDRGQFMS 405

Query: 428 SAQKRMYGAEKGGSSTIEESIRR 431
              +++         +++E IRR
Sbjct: 428 GLHRQLQ------EDSLDERIRR 405

[Close]

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot
Match: Q7SI59 (Pre-mRNA-splicing factor cwc25 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=msp-6 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.0e-04
Identity = 122/436 (27.98%), Postives = 202/436 (46.33%), Query Frame = 0


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAGLIPKQER 67
           KK WH     N+    KAE +  AE+KKL +  ++I+EE+ ++E +   E AG   K +R
Sbjct: 9   KKSWHPQRSGNVAATQKAEAEAIAERKKLQQRLQEIEEERRKEEIQKALEAAGGKRKIDR 68

Query: 68  LDFLYESGLAVGKGSNSD-------GFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 127
           ++++Y SG   G+  +S        G + ++ L   +    A    S ++  +  G    
Sbjct: 69  VEWMY-SGPTDGQAGDSAETEAYLLGKRRIDKLLQDNDTKKALSKQSQQDVLSAAGP--A 128

Query: 128 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKT--VEGEKHKEKNPDE 187
               +A D   K+  DPLL I+++EQQA   + N+PI+   +  +  ++  +   K   E
Sbjct: 129 PVVTNARDVATKIREDPLLAIKRQEQQAYEAMMNDPIKRRQLLASMGIDDSQIAAKGGKE 188

Query: 188 KRERKKHR--HSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRRRR 247
           +R R KHR  H +S R +D   +RD DS   + +R R +H R + S   D S S   RRR
Sbjct: 189 QR-RHKHRSHHHRSDRHRDRDDDRDRDS---ARDRDRDRHSRRRRSDSRDRSRSRSPRRR 248

Query: 248 TDYKNERD---HKDDRDKSSKYD-DHSYSEDRRRRTDYKSEKDH--DRGSKYAAQTTYDQ 307
           +D + +R     +D  D++ + D D S S   R R D +S +       S+  + +   +
Sbjct: 249 SDSEEDRSKQRRRDSPDRTRRRDRDQSRSRGNRDRDDDRSRRHRFPQGRSRSRSGSPGGR 308

Query: 308 SDRKSFKTNSHDS---AERHHDRSRRD----RDSYANNEKDSRRVGELKSYESNASETPH 367
           S R+   +   DS   + R  DR+ RD    R  YA  ++  +  G L   +    +   
Sbjct: 309 SSRRREYSRERDSGGPSSRRDDRNSRDQNRPRRDYAKEDEQPKYDGGLN--KGGRRQQQP 368

Query: 368 ESRHKHRRPATKLSEEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSR 420
           +  HK+       +EEERA +L  MQ  A   ++ R  RLK  AE +  E + +     +
Sbjct: 369 DGDHKN-------AEEERAKKLAAMQAAATDLDKAREERLKALAEAERAEREADEKARQQ 422

[Close]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL
Match: A0A6J1FWM5 (pre-mRNA-splicing factor cwc25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447603 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 8.7e-193
Identity = 403/508 (79.33%), Postives = 427/508 (84.06%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR-----------------------------RRRTDYKN 300
                 DRDKSS+H+DHS+ EDR                             RRRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYPEDRSRTNYKNERDHKDDRDKSSRHDDHSYSEDRRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSYSEDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS KT+SH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKTHSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAER+HDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL
Match: A0A6J1FPD3 (pre-mRNA-splicing factor cwc25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447603 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 8.7e-193
Identity = 403/508 (79.33%), Postives = 427/508 (84.06%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR-----------------------------RRRTDYKN 300
                 DRDKSS+H+DHS+ EDR                             RRRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYPEDRSRTNYKNERDHKDDRDKSSRHDDHSYSEDRRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSYSEDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS KT+SH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKTHSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAER+HDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL
Match: A0A6J1JPW9 (pre-mRNA-splicing factor cwc25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486415 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.4e-190
Identity = 400/507 (78.90%), Postives = 425/507 (83.83%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHR SK K    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRRSKFKH---FSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR----------------------------RRRTDYKNE 300
                 DRDKSS+H+DHS+SEDR                            RRRTDYKNE
Sbjct: 241 ERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNE 300

Query: 301 RDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSHD 360
           RDHKDDRDKSS++DDHSYSEDRRRR DYK+E+++DRGSKYAAQTTYDQSD KS KTNSHD
Sbjct: 301 RDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHD 360

Query: 361 SAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEERA 420
           SAERHHDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEERA
Sbjct: 361 SAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERA 420

Query: 421 ARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGGS 449
           ARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGGS
Sbjct: 421 ARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGS 480

[Close]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL
Match: A0A6J1JPY1 (pre-mRNA-splicing factor cwc25-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486415 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.4e-190
Identity = 400/507 (78.90%), Postives = 425/507 (83.83%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHR SK K    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRRSKFKH---FSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR----------------------------RRRTDYKNE 300
                 DRDKSS+H+DHS+SEDR                            RRRTDYKNE
Sbjct: 241 ERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNE 300

Query: 301 RDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSHD 360
           RDHKDDRDKSS++DDHSYSEDRRRR DYK+E+++DRGSKYAAQTTYDQSD KS KTNSHD
Sbjct: 301 RDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHD 360

Query: 361 SAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEERA 420
           SAERHHDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEERA
Sbjct: 361 SAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERA 420

Query: 421 ARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGGS 449
           ARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGGS
Sbjct: 421 ARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGS 480

[Close]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL
Match: A0A5A7TSZ0 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00360 PE=3 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.5e-181
Identity = 374/451 (82.93%), Postives = 397/451 (88.03%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S+SDGFKSLETLPS+S+AAAATEPSSSKEAAA PGALFE
Sbjct: 61  LVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAATEPSSSKEAAA-PGALFE 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVE EKHK+KNPD+KR
Sbjct: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRRRRTDYK 240
           ERKKHRHSKSKR KD SPERDYDSEDASPERQRRKHD DKSS+H+ HSHSEDRR + D K
Sbjct: 181 ERKKHRHSKSKRHKDSSPERDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSK 240

Query: 241 NERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNS 300
           NER                               D DRGSKYAA+T+YDQSDRK+ K+N 
Sbjct: 241 NER-------------------------------DRDRGSKYAARTSYDQSDRKTSKSNP 300

Query: 301 HDS-AERHHDRSR--RDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLS 360
            DS A+RHHDRS+  RDRDS+ANN+KDSRRVGE + YES+ASETP+ESRH+HRRP TKLS
Sbjct: 301 RDSAADRHHDRSKRDRDRDSHANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLS 360

Query: 361 EEERAARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSRNFLDSAQKRMYGAE 420
           EEERAARLREMQQDAELHEEQRW+RLKKAAEDDALEAK NA PSSRNFLD+AQKRMYGAE
Sbjct: 361 EEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAE 419

Query: 421 KGGSSTIEESIRRRTYYSQGKSEIEANAFRR 449
           KGGSSTIEESIRRRTYYSQGKSEIEANAFRR
Sbjct: 421 KGGSSTIEESIRRRTYYSQGKSEIEANAFRR 419

[Close]

BLAST of Lcy11g003160 vs. NCBI nr
Match: XP_022942620.1 (pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 682.9 bits (1761), Expect = 1.8e-192
Identity = 403/508 (79.33%), Postives = 427/508 (84.06%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR-----------------------------RRRTDYKN 300
                 DRDKSS+H+DHS+ EDR                             RRRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYPEDRSRTNYKNERDHKDDRDKSSRHDDHSYSEDRRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSYSEDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS KT+SH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKTHSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAER+HDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. NCBI nr
Match: XP_022942621.1 (pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 682.9 bits (1761), Expect = 1.8e-192
Identity = 403/508 (79.33%), Postives = 427/508 (84.06%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR-----------------------------RRRTDYKN 300
                 DRDKSS+H+DHS+ EDR                             RRRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYPEDRSRTNYKNERDHKDDRDKSSRHDDHSYSEDRRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSYSEDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS KT+SH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKTHSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAER+HDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. NCBI nr
Match: KAG6600204.1 (Pre-mRNA-splicing factor CWC25-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-191
Identity = 399/508 (78.54%), Postives = 424/508 (83.46%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRR------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH  DK+SKH+D+S+SEDRR      
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 -----------------------------------------------------RRTDYKN 300
                                                                RRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYSEGRSRTNYKNERDHKDEREKSSRHDDHSYSEDKRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSY EDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS K NSH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYPEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKINSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAERHHDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRW+RLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWKRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. NCBI nr
Match: KAG7030865.1 (Ras-related protein RABD2a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-191
Identity = 399/508 (78.54%), Postives = 424/508 (83.46%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKHDRDKSSKHEDHSHSEDRR------ 240
           +RKKHRHSKSK    FSPERD+DSEDASPERQRRKH  DK+SKH+D+S+SEDRR      
Sbjct: 181 DRKKHRHSKSKH---FSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKN 240

Query: 241 -----------------------------------------------------RRTDYKN 300
                                                                RRTDYKN
Sbjct: 241 ERDHKDDRDKSSRHDDHSYSEGRSRTNYKNERDHKDEREKSSRHDDHSYSEDKRRTDYKN 300

Query: 301 ERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSH 360
           ERDHKDDRDKSS++DDHSY EDRRRR DYK+E+DHDRGSKYAAQTTYDQSDRKS K NSH
Sbjct: 301 ERDHKDDRDKSSRHDDHSYPEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKINSH 360

Query: 361 DSAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEER 420
           DSAERHHDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEER
Sbjct: 361 DSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEER 420

Query: 421 AARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGG 449
           AARLREMQQDAELHEEQRW+RLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGG
Sbjct: 421 AARLREMQQDAELHEEQRWKRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGG 480

[Close]

BLAST of Lcy11g003160 vs. NCBI nr
Match: XP_022989323.1 (pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 675.6 bits (1742), Expect = 2.9e-190
Identity = 400/507 (78.90%), Postives = 425/507 (83.83%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           L+PKQERLDFLYESGLAVGK S SDGFKSLETLPSTS+ AA+++PSSSKE AAVPGALF 
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKE-AAVPGALFV 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           DK  SANDAWRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVEGEKHKEKNPD KR
Sbjct: 121 DKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKR 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQRRKH------------------------ 240
           +RKKHR SK K    FSPERD+DSEDASPERQRRKH                        
Sbjct: 181 DRKKHRRSKFKH---FSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKN 240

Query: 241 ------DRDKSSKHEDHSHSEDR----------------------------RRRTDYKNE 300
                 DRDKSS+H+DHS+SEDR                            RRRTDYKNE
Sbjct: 241 ERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNE 300

Query: 301 RDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTYDQSDRKSFKTNSHD 360
           RDHKDDRDKSS++DDHSYSEDRRRR DYK+E+++DRGSKYAAQTTYDQSD KS KTNSHD
Sbjct: 301 RDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHD 360

Query: 361 SAERHHDRSRRDRDSYANNEKDSRRVGELKSYESNASETPHESRHKHRRPATKLSEEERA 420
           SAERHHDRS+R+RDSYANNEK SRRVGE +SYE NASETPHESRHKHRRPATKLSEEERA
Sbjct: 361 SAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERA 420

Query: 421 ARLREMQQDAELHEEQRWRRLKKAAEDDALEAKLNAA-PSSRNFLDSAQKRMYGAEKGGS 449
           ARLREMQQDAELHEEQRWRRLK+AAEDDALEAK NAA PSS+NFLD+AQK MYGAEKGGS
Sbjct: 421 ARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGS 480

[Close]

BLAST of Lcy11g003160 vs. TAIR 10
Match: AT2G44200.1 (CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor )

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-86
Identity = 243/500 (48.60%), Postives = 304/500 (60.80%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           M +KFLNKKGWHTGSLRNIE VWKAEQK EAEQKKL+ELR QI +E+ER EFR LQEQAG
Sbjct: 1   MGMKFLNKKGWHTGSLRNIETVWKAEQKQEAEQKKLEELRLQILQERERSEFRALQEQAG 60

Query: 61  LIPKQERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALFE 120
           LIP+QERL+FLY+SGLAVGKGS S    S +      + + A   +S K   + PGALFE
Sbjct: 61  LIPRQERLEFLYDSGLAVGKGSASGSGVSFQKEEQPLAKSEAGSSASEKPDQSAPGALFE 120

Query: 121 DKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNPDEKR 180
           +K  SAND+WRKLHSDPLL+IRQREQ+ALA++KNNP++MA+IRK+VE EK K K+ D K 
Sbjct: 121 EKAQSANDSWRKLHSDPLLLIRQREQEALAKIKNNPVKMALIRKSVE-EKGKGKDGDTKE 180

Query: 181 ERKKHRHSKSKRQKDFSPERDYDSEDASPERQ--RRKHDRDKSSKHEDH-----SHSED- 240
            +KKH+    K QK  S  +  DSE+ S E    R+ H +  S  H+ H     S  ED 
Sbjct: 181 HKKKHKRKSGKHQKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPRSDLEDE 240

Query: 241 ----RRRRTDYKNERDHKDDRDKSSKYDDHSYSEDRRRRTDYKSEKDHDRGSKYAAQTTY 300
                 R   Y+  R   DD  K  +  D  Y E RR   D +S++   R + Y  + + 
Sbjct: 241 SKGRESRDRHYEKRRSELDDGHKRRERHDTHY-ERRRSEMDDESKRRESRDNHYERRRS- 300

Query: 301 DQSDRKSFKTNSHDSAERHHDRSRRD-RDSYANNE-KDSRRVGE---------------- 360
              D +S +  SHD   +H +R R D  D Y   E +D RR  +                
Sbjct: 301 -DLDDESKRRESHD---KHFERQRSDLDDEYKRRESQDKRRRSDIDDEPKRRDARPNEKY 360

Query: 361 -------------LKSY---------ESNASETPHESRHKHRRPATKLSEEERAARLREM 420
                        LKSY         E   S  P+E +++ R+  +KLSEEERAARL++M
Sbjct: 361 RNRSPKGGVERENLKSYGQEDKKRKAEDLDSGKPNEYQNRRRKGGSKLSEEERAARLKQM 420

Query: 421 QQDAELHEEQRWRRLKKAAEDDALEAKLNAAPSSRNFLDSAQKRMYGAEKGGSSTIEESI 449
           Q DAE+HEEQRW RLKKA E DA+EA  N   + ++FLD A K +YG EKGGSSTIEES+
Sbjct: 421 QMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDANKSVYGVEKGGSSTIEESV 480

[Close]

BLAST of Lcy11g003160 vs. TAIR 10
Match: AT2G44195.1 (CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor )

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-33
Identity = 82/150 (54.67%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQIQEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGS+RN+E VWKAEQKHEAEQ+K++          ER EFR +QEQAG
Sbjct: 1   MALKFLNKKGWHTGSIRNVEKVWKAEQKHEAEQEKIE----------ERSEFRAIQEQAG 60

Query: 61  LIPKQ-ERLDFLYESGLAVGKGSNSDGFKSLETLPSTSSAAAATEPSSSKEAAAVPGALF 120
           L+P++ ERL+FLY+  LAV K +            S+S      +    +  A +PGALF
Sbjct: 61  LVPRRPERLEFLYDPELAVAKQN-----------VSSSRHGVLFQNQDQRARATIPGALF 120

Query: 121 --EDKPHSANDAWRKLHSDPLLIIRQREQQ 148
             +DK HSAND+WRK HSDPLL+IRQ+EQ+
Sbjct: 121 DDDDKRHSANDSWRKFHSDPLLLIRQKEQE 129

The following BLAST results are available for this feature:

BLAST of Lcy11g003160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NXE8	1.6e-13	27.04	Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens OX=9606 GN=CWC25 PE=1 SV=...	[more]
Q9DBF7	7.8e-13	28.35	Pre-mRNA-splicing factor CWC25 homolog OS=Mus musculus OX=10090 GN=Cwc25 PE=2 SV...	[more]
Q4X1D7	1.7e-07	30.02	Pre-mRNA-splicing factor cwc25 OS=Neosartorya fumigata (strain ATCC MYA-4609 / A...	[more]
Q5B0I1	2.7e-05	27.31	Pre-mRNA-splicing factor cwc25 OS=Emericella nidulans (strain FGSC A4 / ATCC 381...	[more]
Q7SI59	3.0e-04	27.98	Pre-mRNA-splicing factor cwc25 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23...	[more]

BLAST of Lcy11g003160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWM5	8.7e-193	79.33	pre-mRNA-splicing factor cwc25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1FPD3	8.7e-193	79.33	pre-mRNA-splicing factor cwc25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JPW9	1.4e-190	78.90	pre-mRNA-splicing factor cwc25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JPY1	1.4e-190	78.90	pre-mRNA-splicing factor cwc25-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7TSZ0	1.5e-181	82.93	Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy11g003160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942620.1	1.8e-192	79.33	pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita moschata]	[more]
XP_022942621.1	1.8e-192	79.33	pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita moschata]	[more]
KAG6600204.1	1.2e-191	78.54	Pre-mRNA-splicing factor CWC25-like protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7030865.1	1.2e-191	78.54	Ras-related protein RABD2a [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022989323.1	2.9e-190	78.90	pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Lcy11g003160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44200.1	2.4e-86	48.60	CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor	[more]
AT2G44195.1	1.1e-33	54.67	CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..105
None	No IPR available	PANTHER	PTHR16196	CELL CYCLE CONTROL PROTEIN CWF25	coord: 1..448
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	SMART	SM01083	Cir_N_3	coord: 10..46 e-value: 3.9E-13 score: 59.6
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	PFAM	PF10197	Cir_N	coord: 11..46 e-value: 8.7E-15 score: 54.6
IPR022209	Pre-mRNA splicing factor	PFAM	PF12542	CWC25	coord: 64..156 e-value: 9.1E-12 score: 45.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g003160.1	Lcy11g003160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005684	U2-type spliceosomal complex