Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTCATAAGCCTCTTCCAACAATAAAAAATATTTAATTTGACGAATTCATCTGAGAATATGAAACTCTTTGAAGAGATAGGCACATGAAATCTTATCATTATGGAAACAGGAAGTGGAAAAAGCAGAAAGAAAAAAAAAAAGAAGAAGCAGCATTAACCTTTAATACTAATGATTAAAAAGTGATACTCAAAAAAGCATGAACCACAAGCTTTTTATTCTCTGCCTTTTTATGTTTGGTTGGGATTGAAAAGAAGCAGAGTAGGGCTGTGAAGCCCAAGTTTCAAAGAACAGATAACAACAATATAAAGGATAAAGGATAAGTCATTAGAATCACACAAATTCAACACAGCCTCATAAAACATTATGCTTTGATTTGGGCGACAATTTGGATATTCTTTCTTGCTTTATGATTTCTCTCTCTCTCTAAAACTCTCAGAAGCTAAGAGAGATTTCTCCAGATGGGTTGTAAGCTAAACTCCCTCAATACTCCAATTCTCTTCAAATTTCCCACAAAAAGAGCAAAACTTGCAGGAAAATCCATCACTTTTTGTCCCACTTTCTCCATCAACAGTCAAAACCAAGAAATACCCACCATTTCCACCATCAAAACCCCTCAAACCCAGATCCCAAAATCTGATTTTTCCACCGTCCATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCCCAAGGAGGAACAGGAACTGGGTCTGCTCAGATCGACGCCGGCGGCAACGGAGGCCAAGTTTCAGTTTCTTTCGATGTTGACACACTCTATATCCCGCCATTGACAACTCAAACCACCAAGTTTCTTGGTCTGCCATTGCCACCGTTTCTGAAGATCGACATCCTCCCTGAATTCTTCCACGGCAATATCAATCAAGAATCCGGCAAGGTAATGCCCATAAGGTGTTTGTTAAAAGTCCTAGCTGAAAATTTGAAAATTAGCGACAGATTCTATATGTTAAATGTGCAAATTTGGGTGTAGGTTGAGCTAGAATTCAAAGCAAAGTTCTTATTCTCAATTGGGAGTGTGTATAAAGCTCCTCCATTGCTGGTACAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAATGGAAAAGGGGAAAGATTAGATGAAAAAGGAAAGTGCAGCTTGGTGGGAGTGGCTACTGTTGAGCCCATTGATGACTTGCTTCTCAACTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCCATCATCACATTCTCTTAGCGCAAAGACGGGCAAATTCTCGGTGCCACGACTGTATGGATACTACTTGTAGTTATTGTTTATCACGTCAACAACCTTTTAAAAATTAAGTGAAATCAACCCGTTTATGTATAGTGTGAACAAGAAAAGTATAATAATTCGGTAGTACTAGAAATTTTCTCAAGAAGTTGAAGAAAAAGAGAGTTTTTTTAATAGTAAAAAAATGATGGTGTTGTCCAGACTCCAGAGTCCAGAGCATTGTTTGGGACAAAGGCAGACACATACATATTGAAAACAATAATTTAATGCATAGGTAGTTGTTCTGGTCATCCATGATTTGTGTTTGAAATATGACATTTGTATTTTAATTAAGAGTGTTTTGTCTGGTGGAGAGCATATAAATAAATAATATCTCTTTTAAGAGTTTTTTATGGCTGAGATTTTGTCTGAGG
mRNA sequence
CAAATTCATAAGCCTCTTCCAACAATAAAAAATATTTAATTTGACGAATTCATCTGAGAATATGAAACTCTTTGAAGAGATAGGCACATGAAATCTTATCATTATGGAAACAGGAAGTGGAAAAAGCAGAAAGAAAAAAAAAAAGAAGAAGCAGCATTAACCTTTAATACTAATGATTAAAAAGTGATACTCAAAAAAGCATGAACCACAAGCTTTTTATTCTCTGCCTTTTTATGTTTGGTTGGGATTGAAAAGAAGCAGAGTAGGGCTGTGAAGCCCAAGTTTCAAAGAACAGATAACAACAATATAAAGGATAAAGGATAAGTCATTAGAATCACACAAATTCAACACAGCCTCATAAAACATTATGCTTTGATTTGGGCGACAATTTGGATATTCTTTCTTGCTTTATGATTTCTCTCTCTCTCTAAAACTCTCAGAAGCTAAGAGAGATTTCTCCAGATGGGTTGTAAGCTAAACTCCCTCAATACTCCAATTCTCTTCAAATTTCCCACAAAAAGAGCAAAACTTGCAGGAAAATCCATCACTTTTTGTCCCACTTTCTCCATCAACAGTCAAAACCAAGAAATACCCACCATTTCCACCATCAAAACCCCTCAAACCCAGATCCCAAAATCTGATTTTTCCACCGTCCATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCCCAAGGAGGAACAGGAACTGGGTCTGCTCAGATCGACGCCGGCGGCAACGGAGGCCAAGTTTCAGTTTCTTTCGATGTTGACACACTCTATATCCCGCCATTGACAACTCAAACCACCAAGTTTCTTGGTCTGCCATTGCCACCGTTTCTGAAGATCGACATCCTCCCTGAATTCTTCCACGGCAATATCAATCAAGAATCCGGCAAGGTTGAGCTAGAATTCAAAGCAAAGTTCTTATTCTCAATTGGGAGTGTGTATAAAGCTCCTCCATTGCTGGTACAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAATGGAAAAGGGGAAAGATTAGATGAAAAAGGAAAGTGCAGCTTGGTGGGAGTGGCTACTGTTGAGCCCATTGATGACTTGCTTCTCAACTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCCATCATCACATTCTCTTAGCGCAAAGACGGGCAAATTCTCGGTGCCACGACTGTATGGATACTACTTGTAGTTATTGTTTATCACGTCAACAACCTTTTAAAAATTAAGTGAAATCAACCCGTTTATGTATAGTGTGAACAAGAAAAGTATAATAATTCGGTAGTACTAGAAATTTTCTCAAGAAGTTGAAGAAAAAGAGAGTTTTTTTAATAGTAAAAAAATGATGGTGTTGTCCAGACTCCAGAGTCCAGAGCATTGTTTGGGACAAAGGCAGACACATACATATTGAAAACAATAATTTAATGCATAGGTAGTTGTTCTGGTCATCCATGATTTGTGTTTGAAATATGACATTTGTATTTTAATTAAGAGTGTTTTGTCTGGTGGAGAGCATATAAATAAATAATATCTCTTTTAAGAGTTTTTTATGGCTGAGATTTTGTCTGAGG
Coding sequence (CDS)
ATGGGTTGTAAGCTAAACTCCCTCAATACTCCAATTCTCTTCAAATTTCCCACAAAAAGAGCAAAACTTGCAGGAAAATCCATCACTTTTTGTCCCACTTTCTCCATCAACAGTCAAAACCAAGAAATACCCACCATTTCCACCATCAAAACCCCTCAAACCCAGATCCCAAAATCTGATTTTTCCACCGTCCATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCCCAAGGAGGAACAGGAACTGGGTCTGCTCAGATCGACGCCGGCGGCAACGGAGGCCAAGTTTCAGTTTCTTTCGATGTTGACACACTCTATATCCCGCCATTGACAACTCAAACCACCAAGTTTCTTGGTCTGCCATTGCCACCGTTTCTGAAGATCGACATCCTCCCTGAATTCTTCCACGGCAATATCAATCAAGAATCCGGCAAGGTTGAGCTAGAATTCAAAGCAAAGTTCTTATTCTCAATTGGGAGTGTGTATAAAGCTCCTCCATTGCTGGTACAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAATGGAAAAGGGGAAAGATTAGATGAAAAAGGAAAGTGCAGCTTGGTGGGAGTGGCTACTGTTGAGCCCATTGATGACTTGCTTCTCAACTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCCATCATCACATTCTCTTAG
Protein sequence
MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
Homology
BLAST of Lcy11g001990 vs. ExPASy TrEMBL
Match:
A0A6J1HTQ8 (uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398 PE=4 SV=1)
HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 207/243 (85.19%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P+LFKFPTK KL GK+ T CP F ++SQNQE PTIST KTPQTQIPKS+
Sbjct: 1 MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTVHFKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFDV TLYIPPL
Sbjct: 61 FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. ExPASy TrEMBL
Match:
A0A6J1FZW3 (uncharacterized protein LOC111449415 OS=Cucurbita moschata OX=3662 GN=LOC111449415 PE=4 SV=1)
HSP 1 Score: 417.2 bits (1071), Expect = 4.8e-113
Identity = 205/243 (84.36%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P LFKFPTK KL GK+ TFCP F ++SQ+QE PTIST KTPQTQIPKS+
Sbjct: 1 MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQSQETPTISTAKTPQTQIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFD+ TLYIPPL
Sbjct: 61 FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDLGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. ExPASy TrEMBL
Match:
A0A6J1CIF5 (uncharacterized protein LOC111011473 OS=Momordica charantia OX=3673 GN=LOC111011473 PE=4 SV=1)
HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 200/243 (82.30%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCK+N+ NT ILFKFPTKRA+L GKS TFCPTFSI+SQNQ+ PTIST T QTQIPKS+
Sbjct: 1 MGCKINTPNTQILFKFPTKRAELGGKSTTFCPTFSIHSQNQDAPTISTTTTNQTQIPKSE 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
ST+HFK+L ACKLGISRYPDFEYNA+GGTGT SA+ D G+G QVSVSFDV TLYIPPL
Sbjct: 61 ISTLHFKTLRACKLGISRYPDFEYNAEGGTGTASAETD--GSGDQVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TT+TTKFLGLPLPPFLKIDILPEFFHGNI++ESGKVELEFKAKF+FS+GS+YKAPPLLV+
Sbjct: 121 TTETTKFLGLPLPPFLKIDILPEFFHGNISKESGKVELEFKAKFIFSVGSIYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEES+GSIR GKGERLD++GKC LVGVATV+PIDD LLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESEGSIRRGKGERLDKEGKCRLVGVATVDPIDDFLLNSFLSLPTECIAILNAII 240
Query: 241 TFS 244
+FS
Sbjct: 241 SFS 241
BLAST of Lcy11g001990 vs. ExPASy TrEMBL
Match:
A0A0A0L5S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1)
HSP 1 Score: 377.5 bits (968), Expect = 4.3e-101
Identity = 191/244 (78.28%), Postives = 215/244 (88.11%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLNS NTPILFKF TKR+ L GKSI F PT +NSQNQE PTI T T+IPKS+
Sbjct: 1 MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPT----TTKIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DAGGNGGQVSVSFDVDTLYIPP 120
STVHFKSLTACKLGISR+PDF+YNA+GGTGTGS +I D G+ ++ VSFDVDTLYIPP
Sbjct: 61 ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
Query: 121 LTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLV 180
LTTQTTKFLGLPLPPFLKID+LPEFF G+INQESGKVELEF++KF+FSIGS+Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
Query: 181 QTVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAI 240
+TVL+SEES+G IR+GKGERLD+ G C LVGVATV+PIDDL LNSFLSLPTECIANLNAI
Sbjct: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
Query: 241 ITFS 244
ITFS
Sbjct: 241 ITFS 240
BLAST of Lcy11g001990 vs. ExPASy TrEMBL
Match:
A0A5A7SWH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00420 PE=4 SV=1)
HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100
Identity = 191/244 (78.28%), Postives = 213/244 (87.30%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLNS NTPILFKF TKR+KL GKSI F PT +N+QNQE P T+IPKS+
Sbjct: 1 MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP---------TKIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DAGGNGGQVSVSFDVDTLYIPP 120
STVHFKSLTACKLGISR+PDF YNA+GGTGTGS +I D + ++ VSFDVDTLYIPP
Sbjct: 61 ISTVHFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPP 120
Query: 121 LTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLV 180
LTTQTTKFLGLPLPPFLKIDILPEFF G+INQESGKVELEF++KF+FSIGS+YKAPPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLV 180
Query: 181 QTVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAI 240
+TVL+SEES+G IR+GKGERLD+KGKC LVGVATV+PIDDL LNSFLSLPTECIANLNAI
Sbjct: 181 KTVLSSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 235
Query: 241 ITFS 244
ITFS
Sbjct: 241 ITFS 235
BLAST of Lcy11g001990 vs. NCBI nr
Match:
XP_022968031.1 (uncharacterized protein LOC111467398 [Cucurbita maxima])
HSP 1 Score: 421.8 bits (1083), Expect = 4.1e-114
Identity = 207/243 (85.19%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P+LFKFPTK KL GK+ T CP F ++SQNQE PTIST KTPQTQIPKS+
Sbjct: 1 MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTVHFKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFDV TLYIPPL
Sbjct: 61 FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. NCBI nr
Match:
XP_023541386.1 (uncharacterized protein LOC111801589 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 419.1 bits (1076), Expect = 2.6e-113
Identity = 206/243 (84.77%), Postives = 222/243 (91.36%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P LFKFPTK KL GK+ TFCP F ++SQNQE PTIST KTPQTQIPKS+
Sbjct: 1 MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFDV TLYIPPL
Sbjct: 61 FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TTQTTKF GLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TTQTTKFFGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVE 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. NCBI nr
Match:
KAG6574148.1 (hypothetical protein SDJN03_28035, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013202.1 hypothetical protein SDJN02_25960 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 418.3 bits (1074), Expect = 4.5e-113
Identity = 205/243 (84.36%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P LFKFPTK KL GK+ TFCP F ++SQNQE PTIST KTPQTQ+PKS+
Sbjct: 1 MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFDV TLYIPPL
Sbjct: 61 FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
T+QTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. NCBI nr
Match:
XP_022945057.1 (uncharacterized protein LOC111449415 [Cucurbita moschata])
HSP 1 Score: 417.2 bits (1071), Expect = 1.0e-112
Identity = 205/243 (84.36%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCKLN+ N P LFKFPTK KL GK+ TFCP F ++SQ+QE PTIST KTPQTQIPKS+
Sbjct: 1 MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQSQETPTISTAKTPQTQIPKSN 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID G G+VSVSFD+ TLYIPPL
Sbjct: 61 FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDLGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEESKGSIR+GKGERLDEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
Query: 241 TFS 244
TFS
Sbjct: 241 TFS 243
BLAST of Lcy11g001990 vs. NCBI nr
Match:
XP_022140932.1 (uncharacterized protein LOC111011473 [Momordica charantia])
HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-108
Identity = 200/243 (82.30%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSD 60
MGCK+N+ NT ILFKFPTKRA+L GKS TFCPTFSI+SQNQ+ PTIST T QTQIPKS+
Sbjct: 1 MGCKINTPNTQILFKFPTKRAELGGKSTTFCPTFSIHSQNQDAPTISTTTTNQTQIPKSE 60
Query: 61 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSFDVDTLYIPPL 120
ST+HFK+L ACKLGISRYPDFEYNA+GGTGT SA+ D G+G QVSVSFDV TLYIPPL
Sbjct: 61 ISTLHFKTLRACKLGISRYPDFEYNAEGGTGTASAETD--GSGDQVSVSFDVGTLYIPPL 120
Query: 121 TTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQ 180
TT+TTKFLGLPLPPFLKIDILPEFFHGNI++ESGKVELEFKAKF+FS+GS+YKAPPLLV+
Sbjct: 121 TTETTKFLGLPLPPFLKIDILPEFFHGNISKESGKVELEFKAKFIFSVGSIYKAPPLLVK 180
Query: 181 TVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAII 240
TVLTSEES+GSIR GKGERLD++GKC LVGVATV+PIDD LLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESEGSIRRGKGERLDKEGKCRLVGVATVDPIDDFLLNSFLSLPTECIAILNAII 240
Query: 241 TFS 244
+FS
Sbjct: 241 SFS 241
BLAST of Lcy11g001990 vs. TAIR 10
Match:
AT5G62140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 140/247 (56.68%), Postives = 173/247 (70.04%), Query Frame = 0
Query: 4 KLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQ---TQIPKSD 63
K+NSL T I + + + R + K SQNQ I IS P+ TQ+P +
Sbjct: 5 KINSLTTTI-YNYKSPRRYINHK-----------SQNQ-IKLISNSLNPKPNTTQLPNTL 64
Query: 64 FSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSA-QID--AGGNGGQVSVSFDVDTLYI 123
+S V FK++ KLGISRYPDFEY+ GG+G G+A +ID + ++SV F+V TLYI
Sbjct: 65 YS-VSFKTIGTGKLGISRYPDFEYSPLGGSGAGTAKKIDDKNRASNSELSVCFNVATLYI 124
Query: 124 PPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSI-GSVYKAPP 183
P LT+QTTKFLG PLPPFLKIDI PE F G INQESGKVELEF AKF F+ G +Y+AP
Sbjct: 125 PSLTSQTTKFLGFPLPPFLKIDISPEIFQGTINQESGKVELEFMAKFFFTAGGGIYRAPA 184
Query: 184 LLVQTVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANL 243
L+V+TVLT+EES G + GKGERLDE+GKC LVGVA VE IDDL +N+FLSLP EC+A+L
Sbjct: 185 LVVRTVLTTEESIGENKRGKGERLDEEGKCRLVGVAKVETIDDLFMNTFLSLPAECLADL 237
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HTQ8 | 2.0e-114 | 85.19 | uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398... | [more] |
| A0A6J1FZW3 | 4.8e-113 | 84.36 | uncharacterized protein LOC111449415 OS=Cucurbita moschata OX=3662 GN=LOC1114494... | [more] |
| A0A6J1CIF5 | 1.6e-108 | 82.30 | uncharacterized protein LOC111011473 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
| A0A0A0L5S5 | 4.3e-101 | 78.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1 | [more] |
| A0A5A7SWH7 | 1.6e-100 | 78.28 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022968031.1 | 4.1e-114 | 85.19 | uncharacterized protein LOC111467398 [Cucurbita maxima] | [more] |
| XP_023541386.1 | 2.6e-113 | 84.77 | uncharacterized protein LOC111801589 [Cucurbita pepo subsp. pepo] | [more] |
| KAG6574148.1 | 4.5e-113 | 84.36 | hypothetical protein SDJN03_28035, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022945057.1 | 1.0e-112 | 84.36 | uncharacterized protein LOC111449415 [Cucurbita moschata] | [more] |
| XP_022140932.1 | 3.3e-108 | 82.30 | uncharacterized protein LOC111011473 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G62140.1 | 1.1e-61 | 56.68 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
