Lcy11g001620 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g001620
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr11: 1639193 .. 1641387 (-)
RNA-Seq ExpressionLcy11g001620
SyntenyLcy11g001620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGACAATCGACAGGCCCTTGAGAACTGCTTTGTTACCCTAGCAAGTATTCTCCTTTTTCGCTCTCTCTTCTACTCAACTACGATCTTAACTCATTACCCTCAATCCGAAGAACGAACTCCGAGCTTGATTTGAAGCCCCAACTTCGAAGATCTCGACAAAATCGCCAAATCCCAGATAAGTTTTATTCGAACTTCAAATTTTCTAATGCTACATTGAAATTCAAGGGGCAGATTATCTTTCAAATGGGAATTTTCTGTTGGATTCGTAACTTATTTCAAGATTGGGGGTGTTCATGTTAAATGGGTGCCTCCCAATTTGGGAAAACAAACGCTTCGGCGATTTCCCACTTGTCCATTTTTGCTCTGTTGTTCGATTACTTGATTTCCTTGAGTATTGCGAGTCTTTAGCGATAATGGTTATCAATCATGAACTCTTTACCGCTTCTGAGTTCGCGGATAGTCTGCAGATTTTCAACTTCTTTTATTTTGCGTCGAACAATTTGGAATCGGAGATTTGGTAGTGATGATGGATTTGAGTTTGTTGTGGAACCCCTTAAGAAGGGGTTGGAGAGATCAGAGCTTGGTTACTTTACGGATGAAAATTCAGATTCTTGTGAGTTTGGAAGTCGTAGATGGGATAATTTGTCGGTTAGAAGGGGTTTTCTTGAGGATGCAAAAACTGATGCTGAAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGAGACTAAAGGTCTCAGGCGCTCTTGTTAGGGAAGTTCTGAGGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCTGTGTGCAAAATTGGGGTACAAGTTTTTCGTGTGGTCTGGTAAGGTCGAGAATTACAGACACCCAGCAAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACAATATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGTTATAAGACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCAGACATGCTGACATATAATGTGGTTTTGTGTGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGGCAGGAGTGGGTTTGCTCCTGATTATCATACTTATAACATTCTTCTTTATGTCCTTGGCAAAGGAGACAAACCTCTTGCGGCTCTAAATCTTTTGAAACACATGAGGGAATTGGGCTCGGATCCAAGCATACTTCACTTCACGACGCTGATAGATGGACTTAGTAGGGCTGGTAATTTGGATGCTTGCAAGTATTTTTTTGATGAACTGGCTAATAATGGCTGCACTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTACACAGTGGCTGGGGAGCATGAGAAAGCTCGAGAACTTTTTGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGTTTTTGTATGGCGGGTAAATTCGAGGAGGCTTACTCTATGCTTTCAGAAATGGAATCCCGAGGTTGCAGTCCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCTGGGAAGCTTTCCGAGGCTCACAAAGTTATAACTCATGTGGTCGAGAAGGGGCAATACGCCCATTTAGTGACAAAATTCAAGGGATATAGGAGATGCTAGATCAGTAGAATGAATCTTTTTCATTGGAGATTGTTAATTAATAAGCAGGTCAGAAATTCAAGAGCGAGTTGGTCCATGGTTTCCTGATATTAATTAATAACCATATGATACAAAGATGTAGCAACCACTGTTATTCCATAATGAAACTTAGTCTCAGTCTTTCTAACTTTGTCTATTCCTTTCTGTTTCTGAAGTTCTTCTCTCCCTTATCATTTTAGCCTTAGAAATGTTTCAAGTTGATTCTATTACAAATAGGACATTTTGACTGAATTGAAATATCGGTGCTTGCTAATCATGTAACATGATTTATC

mRNA sequence

AAACGACAATCGACAGGCCCTTGAGAACTGCTTTGTTACCCTAGCAAGTATTCTCCTTTTTCGCTCTCTCTTCTACTCAACTACGATCTTAACTCATTACCCTCAATCCGAAGAACGAACTCCGAGCTTGATTTGAAGCCCCAACTTCGAAGATCTCGACAAAATCGCCAAATCCCAGATAAGTTTTATTCGAACTTCAAATTTTCTAATGCTACATTGAAATTCAAGGGGCAGATTATCTTTCAAATGGGAATTTTCTGTTGGATTCGTAACTTATTTCAAGATTGGGGGTGTTCATGTTAAATGGGTGCCTCCCAATTTGGGAAAACAAACGCTTCGGCGATTTCCCACTTGTCCATTTTTGCTCTGTTGTTCGATTACTTGATTTCCTTGAGTATTGCGAGTCTTTAGCGATAATGGTTATCAATCATGAACTCTTTACCGCTTCTGAGTTCGCGGATAGTCTGCAGATTTTCAACTTCTTTTATTTTGCGTCGAACAATTTGGAATCGGAGATTTGGTAGTGATGATGGATTTGAGTTTGTTGTGGAACCCCTTAAGAAGGGGTTGGAGAGATCAGAGCTTGGTTACTTTACGGATGAAAATTCAGATTCTTGTGAGTTTGGAAGTCGTAGATGGGATAATTTGTCGGTTAGAAGGGGTTTTCTTGAGGATGCAAAAACTGATGCTGAAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGAGACTAAAGGTCTCAGGCGCTCTTGTTAGGGAAGTTCTGAGGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCTGTGTGCAAAATTGGGGTACAAGTTTTTCGTGTGGTCTGGTAAGGTCGAGAATTACAGACACCCAGCAAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACAATATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGTTATAAGACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCAGACATGCTGACATATAATGTGGTTTTGTGTGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGGCAGGAGTGGGTTTGCTCCTGATTATCATACTTATAACATTCTTCTTTATGTCCTTGGCAAAGGAGACAAACCTCTTGCGGCTCTAAATCTTTTGAAACACATGAGGGAATTGGGCTCGGATCCAAGCATACTTCACTTCACGACGCTGATAGATGGACTTAGTAGGGCTGGTAATTTGGATGCTTGCAAGTATTTTTTTGATGAACTGGCTAATAATGGCTGCACTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTACACAGTGGCTGGGGAGCATGAGAAAGCTCGAGAACTTTTTGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGTTTTTGTATGGCGGGTAAATTCGAGGAGGCTTACTCTATGCTTTCAGAAATGGAATCCCGAGGTTGCAGTCCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCTGGGAAGCTTTCCGAGGCTCACAAAGTTATAACTCATGTGGTCGAGAAGGGGCAATACGCCCATTTAGTGACAAAATTCAAGGGATATAGGAGATGCTAGATCAGTAGAATGAATCTTTTTCATTGGAGATTGTTAATTAATAAGCAGGTCAGAAATTCAAGAGCGAGTTGGTCCATGGTTTCCTGATATTAATTAATAACCATATGATACAAAGATGTAGCAACCACTGTTATTCCATAATGAAACTTAGTCTCAGTCTTTCTAACTTTGTCTATTCCTTTCTGTTTCTGAAGTTCTTCTCTCCCTTATCATTTTAGCCTTAGAAATGTTTCAAGTTGATTCTATTACAAATAGGACATTTTGACTGAATTGAAATATCGGTGCTTGCTAATCATGTAACATGATTTATC

Coding sequence (CDS)

ATGAACTCTTTACCGCTTCTGAGTTCGCGGATAGTCTGCAGATTTTCAACTTCTTTTATTTTGCGTCGAACAATTTGGAATCGGAGATTTGGTAGTGATGATGGATTTGAGTTTGTTGTGGAACCCCTTAAGAAGGGGTTGGAGAGATCAGAGCTTGGTTACTTTACGGATGAAAATTCAGATTCTTGTGAGTTTGGAAGTCGTAGATGGGATAATTTGTCGGTTAGAAGGGGTTTTCTTGAGGATGCAAAAACTGATGCTGAAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGAGACTAAAGGTCTCAGGCGCTCTTGTTAGGGAAGTTCTGAGGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCTGTGTGCAAAATTGGGGTACAAGTTTTTCGTGTGGTCTGGTAAGGTCGAGAATTACAGACACCCAGCAAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACAATATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGTTATAAGACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCAGACATGCTGACATATAATGTGGTTTTGTGTGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGGCAGGAGTGGGTTTGCTCCTGATTATCATACTTATAACATTCTTCTTTATGTCCTTGGCAAAGGAGACAAACCTCTTGCGGCTCTAAATCTTTTGAAACACATGAGGGAATTGGGCTCGGATCCAAGCATACTTCACTTCACGACGCTGATAGATGGACTTAGTAGGGCTGGTAATTTGGATGCTTGCAAGTATTTTTTTGATGAACTGGCTAATAATGGCTGCACTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTACACAGTGGCTGGGGAGCATGAGAAAGCTCGAGAACTTTTTGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGTTTTTGTATGGCGGGTAAATTCGAGGAGGCTTACTCTATGCTTTCAGAAATGGAATCCCGAGGTTGCAGTCCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCTGGGAAGCTTTCCGAGGCTCACAAAGTTATAACTCATGTGGTCGAGAAGGGGCAATACGCCCATTTAGTGACAAAATTCAAGGGATATAGGAGATGCTAG

Protein sequence

MNSLPLLSSRIVCRFSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDENSDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALVREVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYHTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKGYRRC
Homology
BLAST of Lcy11g001620 vs. ExPASy Swiss-Prot
Match: Q7X6A5 (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX=3702 GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.7e-170
Identity = 298/485 (61.44%), Postives = 365/485 (75.26%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFIL-RRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNS+   S+ +  R ++ F+   R   N   G D       EPLK   E SE+       
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEM------- 60

Query: 61  SDSCEFG-SRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGAL 120
              CEF      + +SVR+ F+E  K  A +VL+ L+QD PGF+T  ALDEL + +SG L
Sbjct: 61  --DCEFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLL 120

Query: 121 VREVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAM 180
           VREVL GILR+++  NKT CAKL YKFFVW G  EN+RH A+ YH++MKIFAEC E+KAM
Sbjct: 121 VREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAM 180

Query: 181 WRLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHA 240
            RL+DEM + GYP TA TF +LICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+
Sbjct: 181 CRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS 240

Query: 241 LLVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPD 300
           LL ++QYKLI+WVY+QML DG + D+LTYN+V+ A  +LGK D+ +RLLDEM + GF+PD
Sbjct: 241 LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPD 300

Query: 301 YHTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFD 360
            +TYNILL+ L  G+KPLAALNLL HMRE+G +P ++HFTTLIDGLSRAG L+ACKYF D
Sbjct: 301 LYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMD 360

Query: 361 ELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAG 420
           E    GCTPDVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCMAG
Sbjct: 361 ETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG 420

Query: 421 KFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKF 480
           KF+EA ++L EMESRGC+PNF+VYSTLV+ L+NAGK+ EAH+V+  +VEKG Y HL++K 
Sbjct: 421 KFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 476

Query: 481 KGYRR 484
           K YRR
Sbjct: 481 KKYRR 476

BLAST of Lcy11g001620 vs. ExPASy Swiss-Prot
Match: Q9M1D8 (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX=3702 GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 2.3e-167
Identity = 290/483 (60.04%), Postives = 363/483 (75.16%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDENS 60
           MN   +L + +V +      + R   N  FG ++        +  G    + G+  DE+S
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRKFCNGNFGGNE--------IDNGFPDLDCGF--DEDS 60

Query: 61  DSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALVR 120
           +  E  S   + +SVR  FLE A   A +VL  L+ D  GF++   LDEL ++VSG LVR
Sbjct: 61  NISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVR 120

Query: 121 EVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWR 180
           EVL GILR+++  NK  CAKL Y+FF+WSG+ E +RH  +SYH++MKIFAEC E+KAMWR
Sbjct: 121 EVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWR 180

Query: 181 LVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALL 240
           LVDEM + G+P TARTF +LIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LL
Sbjct: 181 LVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLL 240

Query: 241 VIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYH 300
            ++QYKLIEWVY+QML DG S D+LTYN++L    +LGK+D+F RL DEM R GF+PD +
Sbjct: 241 GVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSY 300

Query: 301 TYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDEL 360
           TYNILL++LGKG+KPLAAL  L HM+E+G DPS+LH+TTLIDGLSRAGNL+ACKYF DE+
Sbjct: 301 TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 360

Query: 361 ANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKF 420
              GC PDVVCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CMAG+F
Sbjct: 361 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 420

Query: 421 EEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKG 480
            EA  +L EMESRGC+PNF+VYSTLVSYLR AGKLSEA KVI  +V+KG Y HLV K   
Sbjct: 421 REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 473

Query: 481 YRR 484
           YRR
Sbjct: 481 YRR 473

BLAST of Lcy11g001620 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-37
Identity = 101/368 (27.45%), Postives = 168/368 (45.65%), Query Frame = 0

Query: 133 LNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPV 192
           L +  C  L   FF        ++H   ++ ++++  A   +  ++  L+ +M  +G+  
Sbjct: 50  LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109

Query: 193 TARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLVIRQYKLIEWVY 252
           +   F  +I      GLA + VE F + K F   P    YN +L  LL   + ++I  VY
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169

Query: 253 QQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPD---YHT-------- 312
           + M  DG   ++ TYNV+L A CK  K+D   +LL EM   G  PD   Y T        
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229

Query: 313 -------------------YNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLID 372
                              YN L+  L K      A  L++ M E G  P+++ ++TLI+
Sbjct: 230 GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289

Query: 373 GLSRAGNLDACKYFFDELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIK-GQL 432
            L  +G ++    F  ++   GC P++   + ++    + G    A +L+++M+   G  
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349

Query: 433 PNVFTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKV 470
           PNV  YN++++GFC  G   +A S+ S ME  GCSPN   Y +L++     G L  A  +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409

BLAST of Lcy11g001620 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 3.2e-36
Identity = 101/335 (30.15%), Postives = 158/335 (47.16%), Query Frame = 0

Query: 141 LGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTIL 200
           L  + F ++ +  N+RH  SS+ +++        F  +  ++ +    GYP+T   FT L
Sbjct: 66  LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125

Query: 201 ICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLVIRQY--KLIEWVYQQMLLD 260
           I    +A L  KV+  F K   FN+ P     N IL  L+  R Y  K  E +++   L 
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE-LFKSSRLH 185

Query: 261 GHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYHTYNILLYVLGKGDKPLAA 320
           G   +  +YN+++ A C    L   ++L  +M      PD  +Y IL+    +  +   A
Sbjct: 186 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 245

Query: 321 LNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDELANNGCTPDVVCYTVMITS 380
           + LL  M   G  P  L +TTL++ L R   L         +   GC PD+V Y  MI  
Sbjct: 246 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 305

Query: 381 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPN 440
           +        AR++ D+M+  G  PN  +Y ++I G C  G F+E    L EM S+G SP+
Sbjct: 306 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 365

Query: 441 FLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAH 474
           F V + LV    + GK+ EA  V+  V++ G+  H
Sbjct: 366 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399

BLAST of Lcy11g001620 vs. ExPASy Swiss-Prot
Match: Q94JX6 (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 3.5e-35
Identity = 96/365 (26.30%), Postives = 169/365 (46.30%), Query Frame = 0

Query: 106 ALDELRLKVSGALVREVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMI 165
           +L+ LRL V+   V  VLR   RS N            +FF W+    +Y   +  Y  +
Sbjct: 67  SLNSLRLPVTSEFVFRVLRATSRSSND---------SLRFFNWARSNPSYTPTSMEYEEL 126

Query: 166 MKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFI-KSKTFN 225
            K  A  +++++MW+++ +M +    ++  T   +I   G  G   + VE F    KT  
Sbjct: 127 AKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLG 186

Query: 226 YRPFKHSYNAILHALLVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFH 285
            +     YN++LHAL  ++ +     + ++M+  G   D  TY +++   C  GK+ +  
Sbjct: 187 CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQ 246

Query: 286 RLLDEMGRSGFAPDYHTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGL 345
             LDEM R GF P     ++L+  L       +A  ++  M + G  P I  F  LI+ +
Sbjct: 247 EFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 306

Query: 346 SRAGNLDACKYFFDELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNV 405
           S++G ++ C   +      G   D+  Y  +I + +  G+ ++A  L +  V  G  P  
Sbjct: 307 SKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFP 366

Query: 406 FTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITH 465
             Y  +I+G C  G F++A+S  S+M+ +   PN  VY+ L++     GK  +A   +  
Sbjct: 367 SLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 422

Query: 466 VVEKG 470
           + E G
Sbjct: 427 MTEMG 422

BLAST of Lcy11g001620 vs. ExPASy TrEMBL
Match: A0A6J1CI85 (pentatricopeptide repeat-containing protein At1g55630-like OS=Momordica charantia OX=3673 GN=LOC111011735 PE=4 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 5.3e-252
Identity = 423/484 (87.40%), Postives = 455/484 (94.01%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDENS 60
           MNS+ LLSSRIVCRFSTSFI+R T+WNR F SDDGFE VVEP K+  +RSELG FTDENS
Sbjct: 1   MNSISLLSSRIVCRFSTSFIVRLTVWNRSFSSDDGFECVVEPFKRVCKRSELGCFTDENS 60

Query: 61  DSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALVR 120
           DS EFG RRWD+ SVRRGFLEDA++DAEKVLEVLKQDGPGFDT+LALDEL++KVSG LVR
Sbjct: 61  DSSEFGGRRWDDFSVRRGFLEDARSDAEKVLEVLKQDGPGFDTILALDELQIKVSGFLVR 120

Query: 121 EVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWR 180
           EVL  ILRSIN ++KT CAKLGYKFFVWSGKVENYRH ASSYH+IMKIFA+CEEFKAMWR
Sbjct: 121 EVLMRILRSINFVDKTQCAKLGYKFFVWSGKVENYRHTASSYHIIMKIFAQCEEFKAMWR 180

Query: 181 LVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALL 240
           LVDEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFNYRPFKH+YNAILH LL
Sbjct: 181 LVDEMTEKGYPVTARTFIILICTCGDAGLARKVVERFIKSKTFNYRPFKHAYNAILHGLL 240

Query: 241 VIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYH 300
           VIRQYKLIEWVYQQMLLDGH+SD+LTYNV+L  +CKLGKLDQFHRLLDEMGR+GF+PDYH
Sbjct: 241 VIRQYKLIEWVYQQMLLDGHTSDILTYNVLLFTKCKLGKLDQFHRLLDEMGRNGFSPDYH 300

Query: 301 TYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDEL 360
           TYNILLYVL KGDKPLAALNLL HMRE+G DP +LHFTTLIDGLSRAGNLDAC+YFFDEL
Sbjct: 301 TYNILLYVLAKGDKPLAALNLLNHMREVGFDPGVLHFTTLIDGLSRAGNLDACRYFFDEL 360

Query: 361 ANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKF 420
           ANNG  PDVVCYTVMITSYTVAGEHEKAR+LFDEM+IKGQLPNVFTYNSMIRGFCMAG+F
Sbjct: 361 ANNGNIPDVVCYTVMITSYTVAGEHEKARQLFDEMIIKGQLPNVFTYNSMIRGFCMAGEF 420

Query: 421 EEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKG 480
           EEAY+ML+EMESRGC+PNFLVYSTLVSYLRNAGKLSEAHKVI HVVEKGQ+AHLVTKFKG
Sbjct: 421 EEAYAMLAEMESRGCNPNFLVYSTLVSYLRNAGKLSEAHKVIKHVVEKGQFAHLVTKFKG 480

Query: 481 YRRC 485
           YRRC
Sbjct: 481 YRRC 484

BLAST of Lcy11g001620 vs. ExPASy TrEMBL
Match: A0A6J1FZ63 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata OX=3662 GN=LOC111449239 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.4e-249
Identity = 429/485 (88.45%), Postives = 452/485 (93.20%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRF-STSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MN+L LLS+RIVCR  S+SFI+RRTIWNR FGSDD FEFV+EP KKGLERSE        
Sbjct: 1   MNALSLLSARIVCRLVSSSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSE-------- 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
             SCEF S R D+LSVRRGFLED+KTDA KVLEVLKQDGPGFDTL+ALDEL+LKVSG LV
Sbjct: 61  --SCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVLRGILRSINVLNKT CAKLGYKFFVWSGKVEN+ H A SYHMIMKIFAECEEFKAMW
Sbjct: 121 REVLRGILRSINVLNKTQCAKLGYKFFVWSGKVENFNHTAGSYHMIMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RLVDEMTEKGYPVTARTFT+LICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL
Sbjct: 181 RLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           L I+QYKLIEWVYQQMLLDGHSSDMLTYN++L ARCKLGKLDQFHRLLDEM R+GF+PD 
Sbjct: 241 LGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDC 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILLYVLGKGDKPLAALNLL HMRE+GSDPSILHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L+NNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM G+
Sbjct: 361 LSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGE 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           FEEAY+ML EMESRGC PNFLVYSTLVSYLRNAG+LSEAHKVITH+VEKGQYAHLVTKFK
Sbjct: 421 FEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFK 475

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 475

BLAST of Lcy11g001620 vs. ExPASy TrEMBL
Match: A0A6J1HY31 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima OX=3661 GN=LOC111467699 PE=4 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 1.6e-248
Identity = 427/485 (88.04%), Postives = 453/485 (93.40%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRF-STSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MN+L LLS+RIV R  S SFI+RRTIWNR FGSDD FEFV+EP KKGLERSE        
Sbjct: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSE-------- 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
             SCEF S R+D+LSVRRGFLED+KTDA KVLEVLKQDGPGFDTL+ALDEL+LKVSG LV
Sbjct: 61  --SCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVLRGILRSINVL+KT CAKLGYKFFVWSGKVEN+ H ASSYH+IMKIFAECEEFKAMW
Sbjct: 121 REVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RLVDEMTEKGYPVTARTFT+LICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL
Sbjct: 181 RLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           L I+QYKLIEWVYQQMLLDGHSSDMLTYN++L ARCKLGKLDQFHRLLDEM R+GF+PDY
Sbjct: 241 LGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDY 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILLYVLGKGDKPLAALNLL HMRE+GSDPSILHFTTLI+GLSRAGNL+ACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L+NNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM G+
Sbjct: 361 LSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGE 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           FEEAY+ML EMESRGC PNFLVYSTLVSYLRNAG+LSEAHKVITH+VEKGQYAHLVTKFK
Sbjct: 421 FEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFK 475

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 475

BLAST of Lcy11g001620 vs. ExPASy TrEMBL
Match: A0A6J1JDA6 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima OX=3661 GN=LOC111483452 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.3e-247
Identity = 422/485 (87.01%), Postives = 449/485 (92.58%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNSL L+SSRIVCR    SFI+RR I NR FG DD FEFVVEP KK LE SE GYFTDEN
Sbjct: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
           SDSCE GSRR D+LS+RRGF E AK DAEKV+E+LKQDGPGFDTLLALDEL+L+VSG LV
Sbjct: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVL+GILRS+NVLNKT CAKLGYKFF+WSGKVENYRH ASSYHMIMKIFAECEEFKAMW
Sbjct: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RL+DEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFN+RPFKHSYNAILH L
Sbjct: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           LVI+QYKLIEWVYQQMLLDGHSSD+LTYNVVL ARCKLGKLDQFHRLLDEM R+GF+PD 
Sbjct: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLL HMRE+G DPSILHFTTLIDGLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L N GC PDV CYTVMIT+YTVAGEHEKARELFDEMV+KGQLPNV TYNSMIRGFCMAGK
Sbjct: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           F+EAYSML+EME+RGC PNF+VYSTLVSYLRNAGKLSEAHKVIT +VEKGQYAHLVTKF+
Sbjct: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFR 480

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 485

BLAST of Lcy11g001620 vs. ExPASy TrEMBL
Match: A0A6J1E6P6 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata OX=3662 GN=LOC111430470 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.3e-247
Identity = 421/485 (86.80%), Postives = 450/485 (92.78%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNSL L+SSRIVCR  STSFI+RR I NR F  DD FEFVVEP KK LE SE GYFTDEN
Sbjct: 1   MNSLSLVSSRIVCRLLSTSFIVRRAICNRSFSGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
            DSCE GSRR D+LS+R+ FLE+AKTDAEKV+E+LKQDGPGFDTLLALDEL+L+VSG LV
Sbjct: 61  LDSCEIGSRREDDLSMRKVFLENAKTDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVL+GILRS+NVLNKT CAKLGYKFFVWS KVENYRH ASSYHM+MKIFAECEEFKAMW
Sbjct: 121 REVLKGILRSVNVLNKTQCAKLGYKFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RL+DEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFN+RPFKHSYNAILH L
Sbjct: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           LVI+QYKLIEWVYQQMLLDGHSSD+LTYNVVL ARCKLGKLDQFHRLLDEM R+GF+PDY
Sbjct: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDY 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLL HMRE+G DPSILHFTTLIDGLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L N GC PDV CYTVMIT+YTVAGEHEKARELFDEMV+KGQLPNV TYNSMIR FCMAGK
Sbjct: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRSFCMAGK 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           F+EAYSML+EME+RGC PNF+VYSTLVSYLRNAGKLSEAHKVIT +VEKGQYAHLVTKF+
Sbjct: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFR 480

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 485

BLAST of Lcy11g001620 vs. NCBI nr
Match: XP_022141309.1 (pentatricopeptide repeat-containing protein At1g55630-like [Momordica charantia])

HSP 1 Score: 879.8 bits (2272), Expect = 1.1e-251
Identity = 423/484 (87.40%), Postives = 455/484 (94.01%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDENS 60
           MNS+ LLSSRIVCRFSTSFI+R T+WNR F SDDGFE VVEP K+  +RSELG FTDENS
Sbjct: 1   MNSISLLSSRIVCRFSTSFIVRLTVWNRSFSSDDGFECVVEPFKRVCKRSELGCFTDENS 60

Query: 61  DSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALVR 120
           DS EFG RRWD+ SVRRGFLEDA++DAEKVLEVLKQDGPGFDT+LALDEL++KVSG LVR
Sbjct: 61  DSSEFGGRRWDDFSVRRGFLEDARSDAEKVLEVLKQDGPGFDTILALDELQIKVSGFLVR 120

Query: 121 EVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWR 180
           EVL  ILRSIN ++KT CAKLGYKFFVWSGKVENYRH ASSYH+IMKIFA+CEEFKAMWR
Sbjct: 121 EVLMRILRSINFVDKTQCAKLGYKFFVWSGKVENYRHTASSYHIIMKIFAQCEEFKAMWR 180

Query: 181 LVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALL 240
           LVDEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFNYRPFKH+YNAILH LL
Sbjct: 181 LVDEMTEKGYPVTARTFIILICTCGDAGLARKVVERFIKSKTFNYRPFKHAYNAILHGLL 240

Query: 241 VIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYH 300
           VIRQYKLIEWVYQQMLLDGH+SD+LTYNV+L  +CKLGKLDQFHRLLDEMGR+GF+PDYH
Sbjct: 241 VIRQYKLIEWVYQQMLLDGHTSDILTYNVLLFTKCKLGKLDQFHRLLDEMGRNGFSPDYH 300

Query: 301 TYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDEL 360
           TYNILLYVL KGDKPLAALNLL HMRE+G DP +LHFTTLIDGLSRAGNLDAC+YFFDEL
Sbjct: 301 TYNILLYVLAKGDKPLAALNLLNHMREVGFDPGVLHFTTLIDGLSRAGNLDACRYFFDEL 360

Query: 361 ANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKF 420
           ANNG  PDVVCYTVMITSYTVAGEHEKAR+LFDEM+IKGQLPNVFTYNSMIRGFCMAG+F
Sbjct: 361 ANNGNIPDVVCYTVMITSYTVAGEHEKARQLFDEMIIKGQLPNVFTYNSMIRGFCMAGEF 420

Query: 421 EEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKG 480
           EEAY+ML+EMESRGC+PNFLVYSTLVSYLRNAGKLSEAHKVI HVVEKGQ+AHLVTKFKG
Sbjct: 421 EEAYAMLAEMESRGCNPNFLVYSTLVSYLRNAGKLSEAHKVIKHVVEKGQFAHLVTKFKG 480

Query: 481 YRRC 485
           YRRC
Sbjct: 481 YRRC 484

BLAST of Lcy11g001620 vs. NCBI nr
Match: XP_023552266.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552267.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552268.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 874.8 bits (2259), Expect = 3.5e-250
Identity = 426/485 (87.84%), Postives = 453/485 (93.40%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNSL L+SSRIVCR FSTSFI+RRTI NR FG DD FEFVVEP KK LE SE GYFTDEN
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
           SDSCE GSRR D+LS+RRGFLE AK  AEKV+E+LKQDGPGFDTLLALDEL+L+VSG LV
Sbjct: 61  SDSCEIGSRRGDDLSMRRGFLEGAKIGAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVL+GILRSINVLNKT CAKLGYKFFVWS KVENYRH ASSYHM+MKIFAECEEFKAMW
Sbjct: 121 REVLKGILRSINVLNKTQCAKLGYKFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RL+DEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFN+RPFKHSYNAILH L
Sbjct: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           LVI+QYKLIEWVYQQMLLDGHSSD+LTYNVVL ARCKLGKLDQFHRLLDEM R+GF+PDY
Sbjct: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDY 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLL HMRE+G DPSILHFTTLIDGLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L N GC PDV CYTVMIT+YTVAGEHEKA+ELFDEMV+KGQLPNV TYNSMIRGFCMAGK
Sbjct: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           F+EAYSML+EME+RGC PNF+VYSTLVSYLRNAGKLSEAHKVIT +VEKGQYAHLVTKF+
Sbjct: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFR 480

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 485

BLAST of Lcy11g001620 vs. NCBI nr
Match: XP_023552269.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 874.4 bits (2258), Expect = 4.6e-250
Identity = 425/485 (87.63%), Postives = 453/485 (93.40%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNSL L+SSRIVCR FSTSFI+RRTI NR FG DD FEFVVEP KK LE SE GYFTDEN
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
           SDSCE GSRR D+LS+RRGFLE AK  AEKV+E+LKQDGPGFDTLLALDEL+L+VSG LV
Sbjct: 61  SDSCEIGSRRGDDLSMRRGFLEGAKIGAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVL+GILRS+NVLNKT CAK GYKFFVWSGKVENYRH ASSYHM+MKIFAECEEFKAMW
Sbjct: 121 REVLKGILRSVNVLNKTQCAKSGYKFFVWSGKVENYRHTASSYHMVMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RL+DEMTEKGYPVTARTF ILICTCGDAGLARKVVERFIKSKTFN+RPFKHSYNAILH L
Sbjct: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           LVI+QYKLIEWVYQQMLLDGHSSD+LTYNVVL ARCKLGKLDQFHRLLDEM R+GF+PDY
Sbjct: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDY 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLL HMRE+G DPSILHFTTLIDGLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L N GC PDV CYTVMIT+YTVAGEHEKA+ELFDEMV+KGQLPNV TYNSMIRGFCMAGK
Sbjct: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           F+EAYSML+EME+RGC PNF+VYSTLVSYLRNAGKLSEAHKVIT +VEKGQYAHLVTKF+
Sbjct: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFR 480

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 485

BLAST of Lcy11g001620 vs. NCBI nr
Match: XP_023542888.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 873.6 bits (2256), Expect = 7.8e-250
Identity = 429/485 (88.45%), Postives = 452/485 (93.20%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRF-STSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MN+L LLS+RIVCR  S SFI+RRTIWNR FGSDD FEFV+EP KKG ERSE        
Sbjct: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFERSE-------- 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
             SCEF S R D+LSVRRGFLED+KTDA KVLEVLKQDGPGFDTL+ALDEL+LKVSG LV
Sbjct: 61  --SCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVLRGILRSINVLNKT CAKLGYKFFVWSGK+EN+ H ASSYHMIMKIFAECEEFKAMW
Sbjct: 121 REVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RLVDEMTEKGYPVTARTFT+LICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL
Sbjct: 181 RLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           L I+QYKLIEWVYQQMLLDGHSSDMLTYN++L ARCKLGKLDQFHRLLDEM R+GF+PDY
Sbjct: 241 LGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDY 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILLYVLGKGDKPLAALNLL HMRE+GSDPSILHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L+NNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM G+
Sbjct: 361 LSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGE 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           FEEAY+ML EMESRGC PNFLVYSTLVSYLRNAG+LSEAHKVITH+VEKGQYAHLVTKFK
Sbjct: 421 FEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFK 475

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 475

BLAST of Lcy11g001620 vs. NCBI nr
Match: XP_022944812.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita moschata])

HSP 1 Score: 870.9 bits (2249), Expect = 5.0e-249
Identity = 429/485 (88.45%), Postives = 452/485 (93.20%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRF-STSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MN+L LLS+RIVCR  S+SFI+RRTIWNR FGSDD FEFV+EP KKGLERSE        
Sbjct: 1   MNALSLLSARIVCRLVSSSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSE-------- 60

Query: 61  SDSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALV 120
             SCEF S R D+LSVRRGFLED+KTDA KVLEVLKQDGPGFDTL+ALDEL+LKVSG LV
Sbjct: 61  --SCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLV 120

Query: 121 REVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMW 180
           REVLRGILRSINVLNKT CAKLGYKFFVWSGKVEN+ H A SYHMIMKIFAECEEFKAMW
Sbjct: 121 REVLRGILRSINVLNKTQCAKLGYKFFVWSGKVENFNHTAGSYHMIMKIFAECEEFKAMW 180

Query: 181 RLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240
           RLVDEMTEKGYPVTARTFT+LICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL
Sbjct: 181 RLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHAL 240

Query: 241 LVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDY 300
           L I+QYKLIEWVYQQMLLDGHSSDMLTYN++L ARCKLGKLDQFHRLLDEM R+GF+PD 
Sbjct: 241 LGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDC 300

Query: 301 HTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILLYVLGKGDKPLAALNLL HMRE+GSDPSILHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGK 420
           L+NNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM G+
Sbjct: 361 LSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGE 420

Query: 421 FEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFK 480
           FEEAY+ML EMESRGC PNFLVYSTLVSYLRNAG+LSEAHKVITH+VEKGQYAHLVTKFK
Sbjct: 421 FEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFK 475

Query: 481 GYRRC 485
           GYRRC
Sbjct: 481 GYRRC 475

BLAST of Lcy11g001620 vs. TAIR 10
Match: AT1G55630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 600.5 bits (1547), Expect = 1.2e-171
Identity = 298/485 (61.44%), Postives = 365/485 (75.26%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFIL-RRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDEN 60
           MNS+   S+ +  R ++ F+   R   N   G D       EPLK   E SE+       
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEM------- 60

Query: 61  SDSCEFG-SRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGAL 120
              CEF      + +SVR+ F+E  K  A +VL+ L+QD PGF+T  ALDEL + +SG L
Sbjct: 61  --DCEFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLL 120

Query: 121 VREVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAM 180
           VREVL GILR+++  NKT CAKL YKFFVW G  EN+RH A+ YH++MKIFAEC E+KAM
Sbjct: 121 VREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAM 180

Query: 181 WRLVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHA 240
            RL+DEM + GYP TA TF +LICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+
Sbjct: 181 CRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS 240

Query: 241 LLVIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPD 300
           LL ++QYKLI+WVY+QML DG + D+LTYN+V+ A  +LGK D+ +RLLDEM + GF+PD
Sbjct: 241 LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPD 300

Query: 301 YHTYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFD 360
            +TYNILL+ L  G+KPLAALNLL HMRE+G +P ++HFTTLIDGLSRAG L+ACKYF D
Sbjct: 301 LYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMD 360

Query: 361 ELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAG 420
           E    GCTPDVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCMAG
Sbjct: 361 ETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG 420

Query: 421 KFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKF 480
           KF+EA ++L EMESRGC+PNF+VYSTLV+ L+NAGK+ EAH+V+  +VEKG Y HL++K 
Sbjct: 421 KFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 476

Query: 481 KGYRR 484
           K YRR
Sbjct: 481 KKYRR 476

BLAST of Lcy11g001620 vs. TAIR 10
Match: AT3G60050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 590.1 bits (1520), Expect = 1.6e-168
Identity = 290/483 (60.04%), Postives = 363/483 (75.16%), Query Frame = 0

Query: 1   MNSLPLLSSRIVCRFSTSFILRRTIWNRRFGSDDGFEFVVEPLKKGLERSELGYFTDENS 60
           MN   +L + +V +      + R   N  FG ++        +  G    + G+  DE+S
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRKFCNGNFGGNE--------IDNGFPDLDCGF--DEDS 60

Query: 61  DSCEFGSRRWDNLSVRRGFLEDAKTDAEKVLEVLKQDGPGFDTLLALDELRLKVSGALVR 120
           +  E  S   + +SVR  FLE A   A +VL  L+ D  GF++   LDEL ++VSG LVR
Sbjct: 61  NISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVR 120

Query: 121 EVLRGILRSINVLNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWR 180
           EVL GILR+++  NK  CAKL Y+FF+WSG+ E +RH  +SYH++MKIFAEC E+KAMWR
Sbjct: 121 EVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWR 180

Query: 181 LVDEMTEKGYPVTARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALL 240
           LVDEM + G+P TARTF +LIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LL
Sbjct: 181 LVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLL 240

Query: 241 VIRQYKLIEWVYQQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYH 300
            ++QYKLIEWVY+QML DG S D+LTYN++L    +LGK+D+F RL DEM R GF+PD +
Sbjct: 241 GVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSY 300

Query: 301 TYNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDEL 360
           TYNILL++LGKG+KPLAAL  L HM+E+G DPS+LH+TTLIDGLSRAGNL+ACKYF DE+
Sbjct: 301 TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 360

Query: 361 ANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKF 420
              GC PDVVCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CMAG+F
Sbjct: 361 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 420

Query: 421 EEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKG 480
            EA  +L EMESRGC+PNF+VYSTLVSYLR AGKLSEA KVI  +V+KG Y HLV K   
Sbjct: 421 REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 473

Query: 481 YRR 484
           YRR
Sbjct: 481 YRR 473

BLAST of Lcy11g001620 vs. TAIR 10
Match: AT3G60040.1 (F-box family protein )

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-51
Identity = 103/180 (57.22%), Postives = 122/180 (67.78%), Query Frame = 0

Query: 304 ILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDELANN 363
           ILL++LGKG+KPLAAL  L HM+E+G DPS+LH+TTLIDG                    
Sbjct: 694 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG-------------------- 753

Query: 364 GCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKFEEA 423
                          Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CMAG+F EA
Sbjct: 754 ---------------YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 813

Query: 424 YSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAHLVTKFKGYRR 483
             +L EMESRGC+PNF+VYSTLV YLR AGKLSEA KVI  +V+KG Y HLV+K   YRR
Sbjct: 814 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR 838

BLAST of Lcy11g001620 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-38
Identity = 101/368 (27.45%), Postives = 168/368 (45.65%), Query Frame = 0

Query: 133 LNKTLCAKLGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPV 192
           L +  C  L   FF        ++H   ++ ++++  A   +  ++  L+ +M  +G+  
Sbjct: 50  LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109

Query: 193 TARTFTILICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLVIRQYKLIEWVY 252
           +   F  +I      GLA + VE F + K F   P    YN +L  LL   + ++I  VY
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169

Query: 253 QQMLLDGHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPD---YHT-------- 312
           + M  DG   ++ TYNV+L A CK  K+D   +LL EM   G  PD   Y T        
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229

Query: 313 -------------------YNILLYVLGKGDKPLAALNLLKHMRELGSDPSILHFTTLID 372
                              YN L+  L K      A  L++ M E G  P+++ ++TLI+
Sbjct: 230 GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289

Query: 373 GLSRAGNLDACKYFFDELANNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIK-GQL 432
            L  +G ++    F  ++   GC P++   + ++    + G    A +L+++M+   G  
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349

Query: 433 PNVFTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPNFLVYSTLVSYLRNAGKLSEAHKV 470
           PNV  YN++++GFC  G   +A S+ S ME  GCSPN   Y +L++     G L  A  +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409

BLAST of Lcy11g001620 vs. TAIR 10
Match: AT4G01400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-37
Identity = 101/335 (30.15%), Postives = 158/335 (47.16%), Query Frame = 0

Query: 141 LGYKFFVWSGKVENYRHPASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTIL 200
           L  + F ++ +  N+RH  SS+ +++        F  +  ++ +    GYP+T   FT L
Sbjct: 66  LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125

Query: 201 ICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLVIRQY--KLIEWVYQQMLLD 260
           I    +A L  KV+  F K   FN+ P     N IL  L+  R Y  K  E +++   L 
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE-LFKSSRLH 185

Query: 261 GHSSDMLTYNVVLCARCKLGKLDQFHRLLDEMGRSGFAPDYHTYNILLYVLGKGDKPLAA 320
           G   +  +YN+++ A C    L   ++L  +M      PD  +Y IL+    +  +   A
Sbjct: 186 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 245

Query: 321 LNLLKHMRELGSDPSILHFTTLIDGLSRAGNLDACKYFFDELANNGCTPDVVCYTVMITS 380
           + LL  M   G  P  L +TTL++ L R   L         +   GC PD+V Y  MI  
Sbjct: 246 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 305

Query: 381 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMAGKFEEAYSMLSEMESRGCSPN 440
           +        AR++ D+M+  G  PN  +Y ++I G C  G F+E    L EM S+G SP+
Sbjct: 306 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 365

Query: 441 FLVYSTLVSYLRNAGKLSEAHKVITHVVEKGQYAH 474
           F V + LV    + GK+ EA  V+  V++ G+  H
Sbjct: 366 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7X6A51.7e-17061.44Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX... [more]
Q9M1D82.3e-16760.04Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX... [more]
Q9M3021.7e-3727.45Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
Q8LDU53.2e-3630.15Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q94JX63.5e-3526.30Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1CI855.3e-25287.40pentatricopeptide repeat-containing protein At1g55630-like OS=Momordica charanti... [more]
A0A6J1FZ632.4e-24988.45pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata... [more]
A0A6J1HY311.6e-24888.04pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima O... [more]
A0A6J1JDA61.3e-24787.01pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima O... [more]
A0A6J1E6P61.3e-24786.80pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata... [more]
Match NameE-valueIdentityDescription
XP_022141309.11.1e-25187.40pentatricopeptide repeat-containing protein At1g55630-like [Momordica charantia][more]
XP_023552266.13.5e-25087.84pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita... [more]
XP_023552269.14.6e-25087.63pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita... [more]
XP_023542888.17.8e-25088.45pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita pepo subsp... [more]
XP_022944812.15.0e-24988.45pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G55630.11.2e-17161.44Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G60050.11.6e-16860.04Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G60040.12.7e-5157.22F-box family protein [more]
AT3G48810.11.2e-3827.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G01400.32.2e-3730.15FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 367..415
e-value: 2.3E-15
score: 56.5
coord: 263..308
e-value: 1.0E-9
score: 38.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 161..193
e-value: 0.003
score: 15.6
coord: 337..369
e-value: 3.3E-7
score: 28.1
coord: 405..438
e-value: 5.5E-13
score: 46.2
coord: 370..403
e-value: 3.3E-7
score: 28.1
coord: 300..333
e-value: 1.7E-4
score: 19.6
coord: 266..298
e-value: 5.8E-6
score: 24.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 337..365
e-value: 6.0E-4
score: 19.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 10.205028
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..332
score: 9.733692
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 11.498462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 14.973193
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 246..327
e-value: 8.4E-14
score: 53.5
coord: 328..397
e-value: 1.2E-16
score: 62.8
coord: 398..468
e-value: 1.4E-18
score: 69.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 116..241
e-value: 8.9E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..484
NoneNo IPR availablePANTHERPTHR47942:SF3OS10G0506000 PROTEINcoord: 1..484

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g001620.1Lcy11g001620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding