Lcy11g001420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g001420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	sec-independent protein translocase protein TATB, chloroplastic
Location	Chr11: 1457364 .. 1463489 (-)
RNA-Seq Expression	Lcy11g001420
Synteny	Lcy11g001420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTTGAATTCTGTCTGTATTAGTGTACAAAATCCATGGCCATGCTGACTCAGAAGAGACTGAAGCTGTGTCCAAATTAGCGCCTATCTGTTTGCTGGGTCTTCCCGGGTTCATGGTCGTTCTCATAGCCATGGCCTCCAAAGTTTCAGCTACCACATTCCCATTTTCCCCTTCTTCCTCATCTGCTTGCACAAGACTTGCAGCTTCCACTTCAGCTTCCTCGCTCACCTTATACCCCAGAACCCCCAAAATTCGTCTCTCCTTGTGCAATTTCCCACTGGGTCTCGGACTTTTCTCTCCATGGAGTGGTTTAAAGCATCTGGGTATTTCAACGAGAGGAAAGTTTCTGATGATCTCTGGTTTGTATGGTCGATTCAATCTGTATTCATATATTGTTTGAATTGAGTGTTTATTGACCTTTTTTCACCTTCTCTGAAATGGTGTTGTCGCAGAGAGGAGGAAGAGAATTCCTAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGAGTTGTGGCTCTGTTAGTTTTTGGTCCCAAGGGTCTTGCTGAGGTGAGTGATTTAGATCATGTAGATGAAGAAAATTTAAAGATATTTGGATTCCTTAGATAGATGTGTTTCTCTTGTTTATACATTTTAGCTTGAGTGTTCTGCAATGTTTGCCTGGATGAAAAATCGTCAGGAACCTCGTCGTTTCTCTTGTTTAATGTATTCTTGATAATGGAAAAAGGCGCGCCGTTGTCGCGAGGGTAGAATTATGTTCGGAGACTAGATTTCATCTCGTTTTAGTTATTCTGTTAGCTTTTGGAGTTGTTGCTGTTGACCAAGTTGAAATAGCAACATGAAACATCACTTACCTTAATACTCCAGTCTTTATTGTCTTGAGCCACTGTGAGTATGAGATGAATAAGTAGGTTGTATTGTTGTTGATGTCAAGAAAGGTAGCTTCTAATTTTATCGGTAGGCCTCCAATTGTTAACACATAAAAAAGCATGTCAGGGGAAAGGACTAGCCCCATGTAGCTTAAGGGGGCGTAACCAGCATGGACTGGTCTAATGGTCAAAAGGATCAATGTAAATAGTAAAAGGTTTAGAGGAAATGTATTCAAGCCATGGTGGTCACCTACAAGTTACCTTGGCAGCCAAATGTAGTAGGATCAGGTGATTGCCTTTCTGAGAATTGTTGAGATGGCATTAGCTGGCTCAAACACTCACAAATATAAAACCGCTTGACTCTACTACATTTGATTGTCAAGGAAATTCATAGGATATTAAATCATAGGTAGGAAACTGTTAGGCTTCCAATTACGCAAACGTATCATAGGAGGGGTAAGAAAGGGGAAGAGAGGCTGAACGAGGTTATGGGGACTGTGGGGACCATCTGGGATTGTGCGTCCGCGAGGCCTGCTGCTGTACGGATGAGAGATGAGGGAAATGATATATAATGTTGGTCTGAGAGAGAGGGAGGCAGTTTTTTGGTAAGATTATACTGAGAGAGTCTTGGGAGAGAAGCCAACCCTCTAGAATAGGTTGGTTAGTTCTATATTGAATTGTGTTCTGTTTTTATCAATGCAATCGGCTGATAAACCACATGTTCATTGGAGAACTACCAATAGAATAGTGTTTGGGGTCTTGTTTCTCTGTTTGTGTGTATTTGTTTGTTAGTTTGTGCTTCCCTACTGGTTTCCCAGAGGTCGATACCTAGCAGAAACTTCTAGAATTTTCCTTAGTTTGTTCTTCTATGAAAGGATTCTATCAGTTATGCCTTCTAAATATGAAGTGCTGAGAAATGACATAGCTGCCTCTTTCCCTTATGTGGTAAAATAGTGGGTGGTAAATGTTTTATAAAGAGGCAAGGATATCTACAAAATTTAAATATCAGATGTTATATTATTGGGCAGTTTATGTTTTCAATTTATTCACAACTGAGGCAGAGGGTGGAACTGGCATGGAGATTCATTTCATAGGAAACGCTTGACCTTGTTTTGTGCAGTAAGAAGCTTGTGCATTTAGGATATGATTATTAGTTGCATGGTTCATGGGGGAAATGCTGATAGTGAATTTAAATATATATATTTTAATGATCATCCATGGGAGATATATATTAACAAAAGAAGGCAAAAAGGAGGATGAAAAAGCCCCCTCCCAAAGGACTAATGAAGCAAAATCTTCCAGCCTTCCAGTCTTCCAATCTTGAAGAATCATAGATAAATTTTCGCTACTAAATAGGTTCTTTGGATGCCGATAGTGATTTTGTTTTCTATTTCTCCATATCTCTTTCAGTGTGATTTTGGAATTGAATAACACTCAGTTTTTTCTTTTCTTTTTCTTCTTCTTCTAGATAAGAAATAACCCTCAGTTTCTGTAACGACAGTCAAATAATTTGAAGTTGTGCTGCTAGTGTGCTGGAACACGTGCTTTACTTCAAAACAAACACAAACACTGACCCATTACCAATGATACTTGATATGATTTTAAATATCTTGGTTGTTGGAATGGAGTACCTGTTCATTTCTTTCCCGAAATTCTTGTCCAGGTAGAACTACACAACCAAAAAGTGAAGACATAGGCTGCCTCATAGGTGATCCTTGTGCTGCACATTTGTTTTAAAAAACCTCAATATTAGTGGTTCTCTGTGAGTACTCACCCATAACGGAGACCAGAAAGAATTGTATTGTTTCCTTGAAGCTATGAAGCAAAAGCTAATGAGTTAGGAGTCATTCTGAATTGTGTGGAGCTATATTTGAAATCTTATTTCAGTTAAATATTTCTGTATTGAGTAACCCAATTATATTCATGGAGTCAGATAAAAAGAAAGGATAACACCCAACAATTTGGAGAGTGCTGGTAATCTCTCCACCCTAGAACCACTGTTCTATTCAAATTGCAAAACATACCCCTTCCCTAACAGACAACATACTAATACTACCACTAACCCCCTACTAACCGTACTAACAAACTCCCCACGTCCCACTAACGACTTGTCTGTGGGTTATTTCTCTTATTGCCCCTCCTATCATAGGTAGTCATGATTAGAGGCCTAATACATTTATACTTGTCCTGAGACCGAAGTGAGAGAAGAAAGTTGGGTTGGCTCTGGAGATATCAAAAGACTAAAAAGGTCAATAAGTTCTAACTATACATCATTACAAATGTAAAGTACTCAAAGTAGCTCGTTTATATTTCCTGATATGAGGCTTGTAAAAAGGTAAGAATAACTTCAAGTTTTGAGACTGAAACAATTTGTAATTAGGAGATCGACATGTTTATGTTATTCAGTAATCTGTTGTTATAAATGGGCAGTCTCAAATGAATACATGTTGGTGAAGAAGGTAGCCTTCGCCCCGTTCCATTGTGGAAAGATTACAAGCTTGTAAGTTGTAACCAGAAGGATTACAACTTACACGCTAGTTATGTATCCATGGTACCGAATTTCAGCTTCAGGAGATTAAGCATCACCACGGCTGCTCCTTGGGGCAAAGCTAGTGATTTGAGAATGCAATTATATAAGACCACCATTTTGGAACTTCCCTTGGTGCCTCCATCTGTAGGACTAAATGAAGCTGCACAGATTATGGGTGAACGGCCAATAGAAAATCCTCTTTCTTTGGTGCTTTCTATTTCCAGATTCTAATAATCCAAACTTTGGTCTCTGTGGCAATCAAATATGTTTTGGGTTGGTTTCCTAGGTTACCTACGATATTCTTAACTTCAAATGGAGAAAGCTACAGTTTCATAGTTTAGGTTTGGTAAAATGGAATGCTAGGATTGATTTGGATCTCCTCATCTGCCTGTTAAGATTAAAGGAATGTTGCTCATCTGGAATTCTGCAGCATTATATGCTTTAAAGACCTACAGAGGGTGAATCGTCAAATTTAACGAATCTTATCTGCTGGCTTTGGAGATCAAATAGGTTGTCTGCAATTAATTTTTTTTTCTCATTTCAACAACCAGGATCTCTGATGGTGAACTTCCAAGCTATTGGCTGGGGAAGATGACAAATACTCCTTGAAATCTTGTCACACGACAAAGTTTACACTTTGTTGTGGAAAATCATATATAGCATCTGCTTAAACGAAAAATCTTCTCTTCAGAAGCATCCAATGCACTTTGAACTTTAGAACTCAAGGATACTGTTAAACCTATTGAACAAATCCTGTTCTTCATTCCAAAAATCTGTCAACTCGATCTTTCTTTTGAAAACTTCCTAACCAATCATCAAATAAAAGGGAATTTGTTTTTTTAGCGAGAGCATCAATGATATAAAAAGACCCCTTGCACCATATAAAAACTCAACATGGCATTGATAACCAAGTCTAACAAAATACCTGAAAAACATTTGGACAAGTTTTTGTTATATTCTTTGGAAGGTTTGCAATAAAATATATAAGTATTTTTGCTGGACTGAAGTTTAGTTTACTTAACTTATTTATATGCAGGTTGCTCGGACTCTGGGGAAGACCTTACGCGCATTTCAACCCACTATAAAAGAACTTCAGGTAGTCATATTTCGGTTTTTGAGATTTTTCAGTATAACTTCTTAAAGACCTTATCGTAGTTTTTTGCTCTTCATTTATGTCTGTAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCAAGTTCAGTCGACAGCTCAAACAATTCAAGTAGATCCAATACCTCCTCAAACCCACCTTCTGTTCCTAAAGCAGAAGATTCTGTTGGAGTAGCTGAACCCAGTGAGTGATTAAGTTATTTGCCATCCATATTCTTATTTGTTATCAATACTCACATTCTAAGGAAAGATTTCAAAGCTACATAGAAAGTATAATTCCAAATGGGAAAAGATTATTAGTAAACAACCTTGTTTCGAAAAACAAAAAAACAAAATGCTCGTTTGATAACCATTTGGTTTTTTATTTTTAAGCTTATAAACACTACTTCCACTTCTAAGTTTCTTTGTTTTTTTATCTACCTTCTTCCCATGTTTTCAAAAACCTAGCCAATTTTTTAAAACTAAAAAAAGTAATTTTCAAAAATTTGTTTTGGTTAGGAATTTAAGTGTCTTTAACAAGAATGAAAACCATGTTAAGAAATTTGAGAGAAAACAAGCATAATTTTCAAAAACAAAAAACCGAATGGTTATCAAATGGGCCAAAATTATTGTTAAACTGAGCCATCATAACTTGAAAAGCTTGTGAGCATGAAACAGATTAGGATTTGGCTTTTAATGTGGTTATTGACAAGGGAAAGGATGGGAAGATTTTAGTTGCAACATTATCAAAAGGCAGTTACATTCAACAGGCAATTTTGGTAAAAGCAGAATAGCAAATTATGGAACACGAACATCTTCGCCGTTGGGCATCGTGTCAACGAATTGAACGATCAGTAGAAATATAGATTCATCATCTGTCGCCTCTATTATGACATGATAGTGAAAGCTTGTTTTCATATGTAGAAACAGCAGATGATTCTCCTTCAGCAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAAGGGCAGCTGAAAGCTCAAGAGCAGGTCCAAATCGATCTTGCAGCAGAAAGCCAGAATGGATCCCAAGAACAGCCTGAAGGTTGCTAAAACCAAATCACTTCTTTGTCTCTCCCTCTATATCTCTCTGACATATATGAACTCGTGACAGGAACTGTTGAAGAACCTGCCATGGCAGCACCTGAACCCGAAAATCTTGGAACGGGTGAGGTGGAAGAATCTGCAACCTTGGCTCCCGGACCTCAAAGTCCTGGAACTGAGATGTAAAAAGGTATTAGAATCGATTTTGGACCGGCGAGTATTTGTTATTTCATCAACAGATTTGATGTGATACACATATTCTTTAGGTGGCTGATGTAGAAAATCTGTGTTAGTGTATGAACCTCAAGGGAGAGATTGATTTTATCAGTGTCTTGGAACTTAATCAGTTTCTAGACATTGAATGAGATGATTTTGTTGGATTAGTTATCAGAATTCCTTCATTATATCACATAATAACTTCAACAAATTTTAGTTACATTGTACCTTAGTTGTAGGATTGATTTGTCTTTTTGAACATAACTCGGTGACT

mRNA sequence

TTATCTTGAATTCTGTCTGTATTAGTGTACAAAATCCATGGCCATGCTGACTCAGAAGAGACTGAAGCTGTGTCCAAATTAGCGCCTATCTGTTTGCTGGGTCTTCCCGGGTTCATGGTCGTTCTCATAGCCATGGCCTCCAAAGTTTCAGCTACCACATTCCCATTTTCCCCTTCTTCCTCATCTGCTTGCACAAGACTTGCAGCTTCCACTTCAGCTTCCTCGCTCACCTTATACCCCAGAACCCCCAAAATTCGTCTCTCCTTGTGCAATTTCCCACTGGGTCTCGGACTTTTCTCTCCATGGAGTGGTTTAAAGCATCTGGGTATTTCAACGAGAGGAAAGTTTCTGATGATCTCTGAGAGGAGGAAGAGAATTCCTAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGAGTTGTGGCTCTGTTAGTTTTTGGTCCCAAGGGTCTTGCTGAGGTTGCTCGGACTCTGGGGAAGACCTTACGCGCATTTCAACCCACTATAAAAGAACTTCAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCAAGTTCAGTCGACAGCTCAAACAATTCAAGTAGATCCAATACCTCCTCAAACCCACCTTCTGTTCCTAAAGCAGAAGATTCTGTTGGAGTAGCTGAACCCAAAACAGCAGATGATTCTCCTTCAGCAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAAGGGCAGCTGAAAGCTCAAGAGCAGGTCCAAATCGATCTTGCAGCAGAAAGCCAGAATGGATCCCAAGAACAGCCTGAAGGAACTGTTGAAGAACCTGCCATGGCAGCACCTGAACCCGAAAATCTTGGAACGGGTGAGGTGGAAGAATCTGCAACCTTGGCTCCCGGACCTCAAAGTCCTGGAACTGAGATGTAAAAAGGTATTAGAATCGATTTTGGACCGGCGAGTATTTGTTATTTCATCAACAGATTTGATGTGATACACATATTCTTTAGGTGGCTGATGTAGAAAATCTGTGTTAGTGTATGAACCTCAAGGGAGAGATTGATTTTATCAGTGTCTTGGAACTTAATCAGTTTCTAGACATTGAATGAGATGATTTTGTTGGATTAGTTATCAGAATTCCTTCATTATATCACATAATAACTTCAACAAATTTTAGTTACATTGTACCTTAGTTGTAGGATTGATTTGTCTTTTTGAACATAACTCGGTGACT

Coding sequence (CDS)

ATGGTCGTTCTCATAGCCATGGCCTCCAAAGTTTCAGCTACCACATTCCCATTTTCCCCTTCTTCCTCATCTGCTTGCACAAGACTTGCAGCTTCCACTTCAGCTTCCTCGCTCACCTTATACCCCAGAACCCCCAAAATTCGTCTCTCCTTGTGCAATTTCCCACTGGGTCTCGGACTTTTCTCTCCATGGAGTGGTTTAAAGCATCTGGGTATTTCAACGAGAGGAAAGTTTCTGATGATCTCTGAGAGGAGGAAGAGAATTCCTAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGAGTTGTGGCTCTGTTAGTTTTTGGTCCCAAGGGTCTTGCTGAGGTTGCTCGGACTCTGGGGAAGACCTTACGCGCATTTCAACCCACTATAAAAGAACTTCAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCAAGTTCAGTCGACAGCTCAAACAATTCAAGTAGATCCAATACCTCCTCAAACCCACCTTCTGTTCCTAAAGCAGAAGATTCTGTTGGAGTAGCTGAACCCAAAACAGCAGATGATTCTCCTTCAGCAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAAGGGCAGCTGAAAGCTCAAGAGCAGGTCCAAATCGATCTTGCAGCAGAAAGCCAGAATGGATCCCAAGAACAGCCTGAAGGAACTGTTGAAGAACCTGCCATGGCAGCACCTGAACCCGAAAATCTTGGAACGGGTGAGGTGGAAGAATCTGCAACCTTGGCTCCCGGACCTCAAAGTCCTGGAACTGAGATGTAA

Protein sequence

MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTEM

Homology

[Close]

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot
Match: Q94G16 (Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum OX=3888 GN=TATB PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-43
Identity = 128/272 (47.06%), Postives = 166/272 (61.03%), Query Frame = 0


Query: 29  LAASTSASSLTLYPR--TPKIRLSLCN------------FPLGLGLFSPWSGLKHLGIST 88
           LA ++S S++ L P+  T  + LS C             + LG  LF+PW+G K LG ST
Sbjct: 5   LAIASSTSTMLLCPKLGTCSMSLSTCTPTSHSKIHHFHLYSLGKRLFTPWNGFKQLGFST 64

Query: 89  RGK---FLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGK 148
           + K   F  I ++ +   KGK V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGK
Sbjct: 65  KPKKPLFHFIGKKGR--CKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGK 124

Query: 149 TLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNPPSVPKAEDS 208
           TLR FQPTI+E+QDVSREFK+TLEREIG+D+I++ + S+ +S+  NT+  P +     +S
Sbjct: 125 TLREFQPTIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNTTPTPSATEITNNS 184

Query: 209 VGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQEQPEGTVEE 268
               +P    D    SKAY+SEEYLK+TE QLKA       +AA+ Q  +    E  +E+
Sbjct: 185 QTAVDPNGKVDE---SKAYSSEEYLKITEEQLKA-------VAAQQQEQTSSPKEDEIEQ 244

Query: 269 PAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
                  P N       E+A   P PQ P +E
Sbjct: 245 QIQ---PPAN-------ETAATVPPPQKPESE 254

[Close]

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot
Match: Q9XH75 (Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATB PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-38
Identity = 137/285 (48.07%), Postives = 163/285 (57.19%), Query Frame = 0


Query: 5   IAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYP------RTPKIRLSLCNFPLGL 64
           +AMA ++ A     S SSS   T+       S L  YP      +  K  LS     LG 
Sbjct: 1   MAMALQIIA-----SSSSSPTITK-------SHLFSYPPLQSRYKASKPNLSSWFSLLGS 60

Query: 65  GLFSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFG 124
             FSP+ GLKHLGIS   K    +  +KR  K   + ASLFGVGAPEALVIGVVALLVFG
Sbjct: 61  SRFSPYIGLKHLGISISPK--SSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFG 120

Query: 125 PKGLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSN- 184
           PKGLAEVAR LGKTLR FQPTI+ELQDVSR+FK+TLEREIGLD+IS+   +  N +R+N 
Sbjct: 121 PKGLAEVARNLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDIST--PNVYNQNRTNP 180

Query: 185 ----TSSNPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDL 244
                   PPSVP  E  V   +P   +DS S  KAYTSE+YLK TE QLKA        
Sbjct: 181 VQPPPPPPPPSVPSTEAPVTANDP---NDSQS-PKAYTSEDYLKFTEEQLKALS------ 240

Query: 245 AAESQNGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQ 279
            AESQ   Q Q +   +   +  P  E+   G   E+   +P  Q
Sbjct: 241 PAESQTEDQTQTQEPPQPTTVQTPTGESQPNGTARETTAASPPRQ 259

[Close]

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot
Match: Q2R237 (Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATB PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 110/214 (51.40%), Postives = 134/214 (62.62%), Query Frame = 0


Query: 43  RTPKIRLSLCNFPLGLGLFSPWSGLKHLGISTRGKFLMISERR---KRIPKGKAVFASLF 102
           R  + RL+L      LGL S  SG  H       +FL+   RR   KR  +G  V+ASLF
Sbjct: 29  RRRRRRLTLAQPYCTLGL-SFVSGRHH-------RFLLRRRRRTESKRTSRGTGVYASLF 88

Query: 103 GVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIG 162
           GVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLRAFQPTI+ELQDVSREF++TLEREIG
Sbjct: 89  GVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFRSTLEREIG 148

Query: 163 LDEISSSVDSSNNSSRSNTSSNPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVT 222
           LDE+  S+           +  PP++  ++     A  +++DD P A+  YTSEE +KVT
Sbjct: 149 LDEVPPSM-----------NYRPPTMNNSQQP---AIDQSSDDKPEAA-PYTSEELIKVT 208

Query: 223 EGQLKAQEQVQIDLAAESQNGSQEQPEGTVEEPA 254
           E QL A        AA + N +QE P    +E A
Sbjct: 209 EEQLAAS-------AAAAWN-TQEPPPSQQKEAA 211

[Close]

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot
Match: O48950 (Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4577 GN=TATB PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 99/203 (48.77%), Postives = 123/203 (60.59%), Query Frame = 0


Query: 64  WSGLKHLGISTR--GKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKG 123
           W G++   I TR    F+ +  R +R      + ASLFGVGAPEALVIGVVALLVFGPKG
Sbjct: 37  WKGVEWGSIQTRMVSSFVAVGSRTRR---RNVICASLFGVGAPEALVIGVVALLVFGPKG 96

Query: 124 LAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSN 183
           LAEVAR LGKTLRAFQPTI+ELQDVSREF++TLEREIG+DE+S S      ++   T+ N
Sbjct: 97  LAEVARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGIDEVSQS------TNYRPTTMN 156

Query: 184 PPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGS 243
               P A+ +V   +P+ A         YTSEE +KVTE Q+ A        AA + N  
Sbjct: 157 NNQQPAADPNV---KPEPA--------PYTSEELMKVTEEQIAAS-------AAAAWN-P 211

Query: 244 QEQPEGTVEEPAMAAPEPENLGT 265
           Q+      +E A   P  E+  T
Sbjct: 217 QQPATSQQQEEAPTTPRSEDAPT 211

[Close]

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot
Match: Q31RR1 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=tatA PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.6e-09
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 97  SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLER 156
           + FG+G PE LVI  +ALLVFGPK L E+ R+LGK LR F       QD SREF++ ++R
Sbjct: 2   NFFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGF-------QDASREFESEIKR 56

Query: 157 EI 159
           EI
Sbjct: 62  EI 56

[Close]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL
Match: A0A6J1CJ51 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.2e-109
Identity = 231/281 (82.21%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 3   VLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFS 62
           +++ MASKVS TTFPFSPS SSAC+R+AASTS+SS  L+P+TPKIRLSLCNFPLGLGLFS
Sbjct: 1   MVVLMASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFS 60

Query: 63  PWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 122
           PW+GLKHLGISTR KFL   ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL
Sbjct: 61  PWTGLKHLGISTRAKFL---ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 120

Query: 123 AEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNP 182
           AEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEIS+SVD S NSSRS+T SNP
Sbjct: 121 AEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNP 180

Query: 183 PSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQ 242
           PSVPKAED V VAEP   D SPS SKAYTSEEYLKVTE QLKAQEQVQ +LAAESQ+GSQ
Sbjct: 181 PSVPKAEDPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQ 240

Query: 243 EQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
            + +G  EEPA AA  P NLGTGE EESAT A GPQSPGTE
Sbjct: 241 VEAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 276

[Close]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL
Match: A0A6J1CJQ6 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 230/281 (81.85%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 3   VLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFS 62
           +++ MASKVS TTFPFSPS SSAC+R+AASTS+SS  L+P+TPKIRLSLCNFPLGLGLFS
Sbjct: 1   MVVLMASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFS 60

Query: 63  PWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 122
           PW+GLKHLGISTR KFL   ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL
Sbjct: 61  PWTGLKHLGISTRAKFL---ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 120

Query: 123 AEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNP 182
           AEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEIS+SVD S NSSRS+T SNP
Sbjct: 121 AEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNP 180

Query: 183 PSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQ 242
           PSVPKAED V VAEP   + SPS SKAYTSEEYLKVTE QLKAQEQVQ +LAAESQ+GSQ
Sbjct: 181 PSVPKAEDPVAVAEP---NGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQ 240

Query: 243 EQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
            + +G  EEPA AA  P NLGTGE EESAT A GPQSPGTE
Sbjct: 241 VEAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 275

[Close]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL
Match: A0A6J1HWX7 (sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467601 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.5e-105
Identity = 228/285 (80.00%), Postives = 246/285 (86.32%), Query Frame = 0


Query: 1   MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGL 60
           MVVL+AMASKVSA  FPFSPSSSS+        S+S  T+Y R PKIRLSLCNFPLGL L
Sbjct: 1   MVVLLAMASKVSAAKFPFSPSSSSSL------ASSSLPTIYSRIPKIRLSLCNFPLGLRL 60

Query: 61  FSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120
           FSPWSGLKHLGIST GKF+   ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK
Sbjct: 61  FSPWSGLKHLGISTSGKFI---ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120

Query: 121 GLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSS 180
           GLAEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEISSSV+S  NSSRSNT S
Sbjct: 121 GLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFS 180

Query: 181 NPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQ--VQIDLAAESQ 240
           NPPSV +AEDS  VAEPK AD+SPSASKAY+SEEYLK+TE QLKAQEQ  VQ +LAAES+
Sbjct: 181 NPPSVSRAEDSAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKAQEQLKVQANLAAESE 240

Query: 241 NGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
           +GSQEQP+GTVEEPA  AP P+NLGT + +ESA  AP PQSPGTE
Sbjct: 241 SGSQEQPQGTVEEPATIAPGPQNLGTSKADESAASAPRPQSPGTE 276

[Close]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL
Match: A0A6J1G1A2 (sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449771 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.8e-103
Identity = 225/283 (79.51%), Postives = 243/283 (85.87%), Query Frame = 0


Query: 1   MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGL 60
           MVVL+AMASKVSA TFPFSPSSSS+        S+S  T++ R PKIRLSLCNFPLGL L
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSL------ASSSLPTIHSRNPKIRLSLCNFPLGLRL 60

Query: 61  FSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120
           FSPWSGLKHLGISTRGKF+   ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK
Sbjct: 61  FSPWSGLKHLGISTRGKFI---ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120

Query: 121 GLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSS 180
           GLAEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEISSSV+S  NSSRSNT S
Sbjct: 121 GLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFS 180

Query: 181 NPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNG 240
           NPPSV KAED   VAEPK AD+SPSASKAY+SEEYLK+TE QLK    VQ +LAAES++G
Sbjct: 181 NPPSVSKAEDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK----VQANLAAESESG 240

Query: 241 SQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
           SQEQP+GTVEEPA  AP P+NLGTG+ +ESA  A  PQSPGTE
Sbjct: 241 SQEQPQGTVEEPATIAPGPQNLGTGKADESAASALRPQSPGTE 270

[Close]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL
Match: A0A6J1CHV3 (sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.8e-101
Identity = 215/262 (82.06%), Postives = 232/262 (88.55%), Query Frame = 0


Query: 3   VLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFS 62
           +++ MASKVS TTFPFSPS SSAC+R+AASTS+SS  L+P+TPKIRLSLCNFPLGLGLFS
Sbjct: 1   MVVLMASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFS 60

Query: 63  PWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 122
           PW+GLKHLGISTR KFL   ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL
Sbjct: 61  PWTGLKHLGISTRAKFL---ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 120

Query: 123 AEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNP 182
           AEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEIS+SVD S NSSRS+T SNP
Sbjct: 121 AEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNP 180

Query: 183 PSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQ 242
           PSVPKAED V VAEP   D SPS SKAYTSEEYLKVTE QLKAQEQVQ +LAAESQ+GSQ
Sbjct: 181 PSVPKAEDPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQ 240

Query: 243 EQPEGTVEEPAMAAPEPENLGT 265
            + +G  EEPA AA  P NLGT
Sbjct: 241 VEAQGVAEEPATAATGPRNLGT 257

[Close]

BLAST of Lcy11g001420 vs. NCBI nr
Match: XP_022141177.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109
Identity = 231/281 (82.21%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 3   VLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFS 62
           +++ MASKVS TTFPFSPS SSAC+R+AASTS+SS  L+P+TPKIRLSLCNFPLGLGLFS
Sbjct: 1   MVVLMASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFS 60

Query: 63  PWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 122
           PW+GLKHLGISTR KFL   ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL
Sbjct: 61  PWTGLKHLGISTRAKFL---ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 120

Query: 123 AEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNP 182
           AEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEIS+SVD S NSSRS+T SNP
Sbjct: 121 AEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNP 180

Query: 183 PSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQ 242
           PSVPKAED V VAEP   D SPS SKAYTSEEYLKVTE QLKAQEQVQ +LAAESQ+GSQ
Sbjct: 181 PSVPKAEDPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQ 240

Query: 243 EQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
            + +G  EEPA AA  P NLGTGE EESAT A GPQSPGTE
Sbjct: 241 VEAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 276

[Close]

BLAST of Lcy11g001420 vs. NCBI nr
Match: XP_022141178.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 230/281 (81.85%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 3   VLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGLFS 62
           +++ MASKVS TTFPFSPS SSAC+R+AASTS+SS  L+P+TPKIRLSLCNFPLGLGLFS
Sbjct: 1   MVVLMASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFS 60

Query: 63  PWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 122
           PW+GLKHLGISTR KFL   ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL
Sbjct: 61  PWTGLKHLGISTRAKFL---ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGL 120

Query: 123 AEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNP 182
           AEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEIS+SVD S NSSRS+T SNP
Sbjct: 121 AEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNP 180

Query: 183 PSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNGSQ 242
           PSVPKAED V VAEP   + SPS SKAYTSEEYLKVTE QLKAQEQVQ +LAAESQ+GSQ
Sbjct: 181 PSVPKAEDPVAVAEP---NGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQ 240

Query: 243 EQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
            + +G  EEPA AA  P NLGTGE EESAT A GPQSPGTE
Sbjct: 241 VEAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 275

[Close]

BLAST of Lcy11g001420 vs. NCBI nr
Match: XP_022968335.1 (sec-independent protein translocase protein TATB, chloroplastic [Cucurbita maxima])

HSP 1 Score: 391.7 bits (1005), Expect = 5.3e-105
Identity = 228/285 (80.00%), Postives = 246/285 (86.32%), Query Frame = 0


Query: 1   MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGL 60
           MVVL+AMASKVSA  FPFSPSSSS+        S+S  T+Y R PKIRLSLCNFPLGL L
Sbjct: 1   MVVLLAMASKVSAAKFPFSPSSSSSL------ASSSLPTIYSRIPKIRLSLCNFPLGLRL 60

Query: 61  FSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120
           FSPWSGLKHLGIST GKF+   ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK
Sbjct: 61  FSPWSGLKHLGISTSGKFI---ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120

Query: 121 GLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSS 180
           GLAEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEISSSV+S  NSSRSNT S
Sbjct: 121 GLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFS 180

Query: 181 NPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQ--VQIDLAAESQ 240
           NPPSV +AEDS  VAEPK AD+SPSASKAY+SEEYLK+TE QLKAQEQ  VQ +LAAES+
Sbjct: 181 NPPSVSRAEDSAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKAQEQLKVQANLAAESE 240

Query: 241 NGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
           +GSQEQP+GTVEEPA  AP P+NLGT + +ESA  AP PQSPGTE
Sbjct: 241 SGSQEQPQGTVEEPATIAPGPQNLGTSKADESAASAPRPQSPGTE 276

[Close]

BLAST of Lcy11g001420 vs. NCBI nr
Match: XP_038891745.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 4.5e-104
Identity = 226/283 (79.86%), Postives = 242/283 (85.51%), Query Frame = 0


Query: 1   MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGL 60
           MVVLI MASK S +TFPFSPSSSSAC+R A STS SS  LYPRTPK RLSLCNFPLGLGL
Sbjct: 28  MVVLIIMASKFSVSTFPFSPSSSSACSRPAPSTSPSSSILYPRTPKFRLSLCNFPLGLGL 87

Query: 61  FSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120
           FSPW+GLKHLGIS  GKF    ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK
Sbjct: 88  FSPWNGLKHLGISNGGKF---PERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 147

Query: 121 GLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSS 180
           GLAEVAR LGKTLRAFQPTI+ELQDVSREFKT+LEREIGLDEISSSV+SS NSS+ NT S
Sbjct: 148 GLAEVARNLGKTLRAFQPTIRELQDVSREFKTSLEREIGLDEISSSVNSSYNSSKLNTYS 207

Query: 181 NPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDLAAESQNG 240
           +PP VPKAE+SV VAEP   DDS SASKAYTSEEYLKVTE QL AQ+Q+Q + AAESQ+G
Sbjct: 208 DPPPVPKAEESVAVAEP--TDDSSSASKAYTSEEYLKVTEEQLNAQDQLQTNFAAESQSG 267

Query: 241 SQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
           SQ QPEGT+EEP  AAPE +NLGTG+ EES    P P  PGTE
Sbjct: 268 SQVQPEGTIEEPTTAAPELQNLGTGKAEESPASVPRP--PGTE 303

[Close]

BLAST of Lcy11g001420 vs. NCBI nr
Match: XP_023541969.1 (sec-independent protein translocase protein TATB, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103
Identity = 225/285 (78.95%), Postives = 245/285 (85.96%), Query Frame = 0


Query: 1   MVVLIAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYPRTPKIRLSLCNFPLGLGL 60
           MVVL+AMASKVSA TFPFSPSSSS+        S+S  T++ R PKIRLSLCNFPLGL L
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSL------ASSSLPTIHSRNPKIRLSLCNFPLGLRL 60

Query: 61  FSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120
           FSPWSGLKHLGISTRGKF+   ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK
Sbjct: 61  FSPWSGLKHLGISTRGKFI---ERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPK 120

Query: 121 GLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSS 180
           GLAEVAR LGKTLRAFQPTI+ELQDVSREFKTTLEREIGLDEISSSV+S  NSSRSNT S
Sbjct: 121 GLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFS 180

Query: 181 NPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQ--VQIDLAAESQ 240
           NP SV KAED   VAEP+ AD+SPSASKAY+SEEYLK+TE QLKAQEQ  VQ +LAAES+
Sbjct: 181 NPASVSKAEDPAAVAEPEIADESPSASKAYSSEEYLKLTEEQLKAQEQLRVQANLAAESE 240

Query: 241 NGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQSPGTE 284
           +GSQEQP+GT+ EPA   P P+NLGTG+ +ESA  AP PQSPGTE
Sbjct: 241 SGSQEQPQGTIGEPATITPGPQNLGTGKADESAASAPRPQSPGTE 276

[Close]

BLAST of Lcy11g001420 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 161.8 bits (408), Expect = 8.3e-40
Identity = 137/285 (48.07%), Postives = 163/285 (57.19%), Query Frame = 0


Query: 5   IAMASKVSATTFPFSPSSSSACTRLAASTSASSLTLYP------RTPKIRLSLCNFPLGL 64
           +AMA ++ A     S SSS   T+       S L  YP      +  K  LS     LG 
Sbjct: 1   MAMALQIIA-----SSSSSPTITK-------SHLFSYPPLQSRYKASKPNLSSWFSLLGS 60

Query: 65  GLFSPWSGLKHLGISTRGKFLMISERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFG 124
             FSP+ GLKHLGIS   K    +  +KR  K   + ASLFGVGAPEALVIGVVALLVFG
Sbjct: 61  SRFSPYIGLKHLGISISPK--SSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFG 120

Query: 125 PKGLAEVARTLGKTLRAFQPTIKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSN- 184
           PKGLAEVAR LGKTLR FQPTI+ELQDVSR+FK+TLEREIGLD+IS+   +  N +R+N 
Sbjct: 121 PKGLAEVARNLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDIST--PNVYNQNRTNP 180

Query: 185 ----TSSNPPSVPKAEDSVGVAEPKTADDSPSASKAYTSEEYLKVTEGQLKAQEQVQIDL 244
                   PPSVP  E  V   +P   +DS S  KAYTSE+YLK TE QLKA        
Sbjct: 181 VQPPPPPPPPSVPSTEAPVTANDP---NDSQS-PKAYTSEDYLKFTEEQLKALS------ 240

Query: 245 AAESQNGSQEQPEGTVEEPAMAAPEPENLGTGEVEESATLAPGPQ 279
            AESQ   Q Q +   +   +  P  E+   G   E+   +P  Q
Sbjct: 241 PAESQTEDQTQTQEPPQPTTVQTPTGESQPNGTARETTAASPPRQ 259

[Close]

BLAST of Lcy11g001420 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 81  ISERRKRIPKGKAVFA-SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRAFQPT 140
           I  R ++ P  K +   +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ  
Sbjct: 45  IGRRIRQEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQA 104

Query: 141 IKELQDVSREFKTTLEREIGLDEISSSVDSSNNSSRSNTSSNPPS 185
            KE +    E KT  E  +     SS V +SN      T  +  S
Sbjct: 105 AKEFES---ELKTEPEESVA---ESSQVATSNKEEEKKTEVSSSS 143

The following BLAST results are available for this feature:

BLAST of Lcy11g001420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G16	1.2e-43	47.06	Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum...	[more]
Q9XH75	1.2e-38	48.07	Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis t...	[more]
Q2R237	1.2e-32	51.40	Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa ...	[more]
O48950	1.7e-29	48.77	Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4...	[more]
Q31RR1	5.6e-09	54.84	Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (str...	[more]

BLAST of Lcy11g001420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJ51	2.2e-109	82.21	sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Mo...	[more]
A0A6J1CJQ6	1.1e-108	81.85	sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Mo...	[more]
A0A6J1HWX7	2.5e-105	80.00	sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita max...	[more]
A0A6J1G1A2	1.8e-103	79.51	sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1CHV3	3.8e-101	82.06	sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Mo...	[more]

BLAST of Lcy11g001420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141177.1	4.6e-109	82.21	sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Momo...	[more]
XP_022141178.1	2.3e-108	81.85	sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Momo...	[more]
XP_022968335.1	5.3e-105	80.00	sec-independent protein translocase protein TATB, chloroplastic [Cucurbita maxim...	[more]
XP_038891745.1	4.5e-104	79.86	sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Beni...	[more]
XP_023541969.1	1.3e-103	78.95	sec-independent protein translocase protein TATB, chloroplastic [Cucurbita pepo ...	[more]

BLAST of Lcy11g001420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52440.1	8.3e-40	48.07	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G28750.1	1.6e-06	37.14	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01506	TATBPROTEIN	coord: 98..118 score: 40.46 coord: 118..137 score: 30.52
None	No IPR available	GENE3D	1.20.5.3310		coord: 98..146 e-value: 2.3E-17 score: 64.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..208
None	No IPR available	PANTHER	PTHR33162	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 7..261
None	No IPR available	PANTHER	PTHR33162:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC	coord: 7..261
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	TatA_B_E	coord: 101..151 e-value: 2.3E-23 score: 81.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g001420.1	Lcy11g001420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902458	positive regulation of stomatal opening
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0043953	protein transport by the Tat complex
biological_process	GO:1903426	regulation of reactive oxygen species biosynthetic process
biological_process	GO:2000070	regulation of response to water deprivation
biological_process	GO:0009409	response to cold
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity