Homology
BLAST of Lcy11g001140 vs. ExPASy Swiss-Prot
Match:
Q9FLX6 (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H31 PE=2 SV=1)
HSP 1 Score: 902.1 bits (2330), Expect = 4.9e-261
Identity = 442/874 (50.57%), Postives = 616/874 (70.48%), Query Frame = 0
Query: 9 FLNR-NELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLLTLYAKRF 68
FL+R NEL L++SC +++S C S S + G+ +H P+IK GL NL L NNLL+LY K
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 69 GLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIR 128
G+ AR LFDEM +R V +WT + +A+ +++ + A LF+ M+ G PNEFT S+++R
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 129 SCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVT 188
SC+ ++ G VHG VIK GFE V+G +L DLY+KC KEA E+F ++ +ADT++
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 189 WTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKLLHSHVIT 248
WT MISSLV A+KW EALQ Y M+++G+ PNEFTF KLL ++FLGL+FGK +HS++I
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIV 252
Query: 249 LGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAA 308
GI LNVVLKT+LVD YS++ ++EDA++V N + E+DVFLWTS++S F +NL+ KEA+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 309 FQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMK 368
F EMR+ G+ PN+FTYS++LS C+ + SL+ GKQIH Q I VG E G+AL++MYMK
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 369 CSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSS 428
CS +A RVF + SP+V+ WT+LI GL +HG QDC+ ++M V+PN TLS
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 429 ILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRD 488
+L ACS + R H Y+L+ +++VGN+LVDAYA S VD AW VIR+MK RD
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 489 TITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHG 548
ITYTSL TR N++G HEMAL I M D ++MD++SL +SA+ LG +ETGK LH
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 549 YSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISS 608
YS+K SV NSLVD+Y K GSL+DA K FEEIA PDVVSWNG++S +A NG ISS
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 609 ALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLV 668
ALSAF++MR+ +PDS+TFL +LSACS G L D G+ YFQ M++ +NIEP+++HYV LV
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 669 DLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSS 728
+LGRAG+LE+A VVE+M + + I+KTLL AC+ GN+ LGED+A +GL L P D +
Sbjct: 673 GILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPA 732
Query: 729 FYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSH-PQIN 788
Y+LLA+LYDE +P+L+ KTR LM ++ + K +S +E+ K+H F++ D + + N
Sbjct: 733 LYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTN 792
Query: 789 DIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNISICREC 848
I ++E +K E K G Y EN+S HS K A+ +G + P+A V ++KN +C++C
Sbjct: 793 GIYAEIESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 849 HEFILLATKVVEREIVVRDGSRLHVFKNGSCSCR 881
HEF+ + T++V+++I VRDG+++H+FKNG CSC+
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
BLAST of Lcy11g001140 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 527.7 bits (1358), Expect = 2.5e-148
Identity = 284/879 (32.31%), Postives = 477/879 (54.27%), Query Frame = 0
Query: 19 EESCSQLISICNSKSLKEGVC--VHSPIIKLGLHGNLYLSNNLLTLYAKRFGLKQARNLF 78
E + S ++ C S+ V +H+ I+ GL + + N L+ LY++ + AR +F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 79 DEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELE 138
D + +D SW A+ + +N EA LF M LG P + S+++ +C + LE
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 139 LGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLV 198
+G +HG V+K GF S + L+ LY A +F NM D VT+ +I+ L
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 199 QAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKF-GKLLHSHVITLGIDLNVV 258
Q ++A++ + M G+ P+ T L+ + G F G+ LH++ LG N
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 259 LKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSG 318
++ AL+++Y++ ++E A+ +T ++V LW ++ + ++ + F++M+
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 319 ILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMKCSDLIDDA 378
I+PN +TY S+L C + LELG+QIH Q+I + + S LI+MY K L D A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL-DTA 545
Query: 379 LRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSSILGACSSA 438
+ V+ WT++I+G ++ F M G++ + L++ + AC+
Sbjct: 546 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 605
Query: 439 KAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSLA 498
+A H D+ NALV Y+R G +++++ + D I + +L
Sbjct: 606 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 665
Query: 499 TRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHGYSLKYALD 558
+ Q G++E AL+ M + + + + S V AA+ ++ GKQ+H K D
Sbjct: 666 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 725
Query: 559 NTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSALSAFDDM 618
+ V N+L+ +Y K GS+ DA K F E++ + VSWN +I+ + +G S AL +FD M
Sbjct: 726 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 785
Query: 619 RLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVDLLGRAGQ 678
+ ++P+ +T + +LSACS GLVD G+ YF+SM + + P+ +HYVC+VD+L RAG
Sbjct: 786 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 845
Query: 679 LEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSSFYLLLANL 738
L +A E ++ MP + D +++TLLSAC +H NM +GE A L+L+P DS+ Y+LL+NL
Sbjct: 846 LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 905
Query: 739 YDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQINDIEE----- 798
Y + D TR+ M+++GV+K P QSWIE+ + IH F GD++HP ++I E
Sbjct: 906 YAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 965
Query: 799 -----KLEFLKAEFKIRGVLYHDVENS--SHHSEKLALAFGLVNMPPKAVVRIMKNISIC 858
++ +++ F + L H+ ++ HSEKLA++FGL+++P + +MKN+ +C
Sbjct: 966 TKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1025
Query: 859 RECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
+CH +I +KV REI+VRD R H F+ G+CSC+ Y
Sbjct: 1026 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
BLAST of Lcy11g001140 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 503.1 bits (1294), Expect = 6.6e-141
Identity = 271/827 (32.77%), Postives = 466/827 (56.35%), Query Frame = 0
Query: 87 WTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELELGRCVHGHVI 146
W L + VR+ EA + M+ LG P+ + L+++ ++ ++ELG+ +H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLVQAQKWDEAL 206
K G+ V + TL++LY KC Y+VF + + + V+W ++ISSL +KW+ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 207 QSYITMMESGIIPNEFTFTKLLATANFL----GLKFGKLLHSHVITLGIDLNVVLKTALV 266
+++ M++ + P+ FT ++ + L GL GK +H++ + G +LN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244
Query: 267 DMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSGILPNSF 326
MY + G+L + + +D+ W +++S QN ++ EA+ +EM G+ P+ F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304
Query: 327 TYSSVLSACTLIPSLELGKQIHLQVILVG-LEADVCAGSALINMYMKCSDLIDDALRVFR 386
T SSVL AC+ + L GK++H + G L+ + GSAL++MY C ++ RVF
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL-SGRRVFD 364
Query: 387 TITSPSVICWTSLISGLAEHGCAQDCYRYFLDM-QSAGVQPNSFTLSSILGACSSAKAQN 446
+ + W ++I+G +++ ++ F+ M +SAG+ NS T++ ++ AC + A +
Sbjct: 365 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 424
Query: 447 RTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSLATRMN 506
R HG+V+K D V N L+D Y+R G +D A R+ M+ RD +T+ ++ T
Sbjct: 425 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 484
Query: 507 QMGDHEMALKTIGSMRD-----------DNVKMDEVSLASLVSAATGLGTVETGKQLHGY 566
HE AL + M++ ++K + ++L +++ + L + GK++H Y
Sbjct: 485 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 544
Query: 567 SLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSA 626
++K L +V ++LVD+Y K G L+ + K F++I + +V++WN +I ++G A
Sbjct: 545 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 604
Query: 627 LSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVD 686
+ M + G+KP+ +TF+S+ +ACS G+VD G+ F M+ + +EP DHY C+VD
Sbjct: 605 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 664
Query: 687 LLGRAGQLEKAMEVVESMPFEAD-TKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSS 746
LLGRAG++++A +++ MP + + + +LL A ++H N+ +GE A+ +QL+P +S
Sbjct: 665 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 724
Query: 747 FYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQIND 806
Y+LLAN+Y D + + R+ M+++GVRK P SWIE ++H F+ GD SHPQ
Sbjct: 725 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 784
Query: 807 IEEKLEFLKAEFKIRG------VLYHDVENSSH------HSEKLALAFGLVNMPPKAVVR 866
+ LE L + G + H+VE HSEKLA+AFG++N P ++R
Sbjct: 785 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIR 844
Query: 867 IMKNISICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
+ KN+ +C +CH +K+V+REI++RD R H FKNG+CSC Y
Sbjct: 845 VAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
BLAST of Lcy11g001140 vs. ExPASy Swiss-Prot
Match:
Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 483.0 bits (1242), Expect = 7.1e-135
Identity = 288/828 (34.78%), Postives = 452/828 (54.59%), Query Frame = 0
Query: 69 LKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRS 128
L A NLFD+ P RD S+ +L + R+ EA LF + LG + S++++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 129 CSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTW 188
+ + GR +H IK GF +G +L+D Y K K+ +VF M + + VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 189 TAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGL-KFGKLLHSHVIT 248
T +IS + DE L ++ M G PN FTF L G+ G +H+ V+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 249 LGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAA 308
G+D + + +L+++Y + G + A + ++T K V W S+IS + N EA+
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 309 FQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMK 368
F MR + + + +++SV+ C + L +Q+H V+ G D +AL+ Y K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 369 CSDLIDDALRVFRTI-TSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLS 428
C+ ++ DALR+F+ I +V+ WT++ISG ++ ++ F +M+ GV+PN FT S
Sbjct: 343 CTAML-DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 402
Query: 429 SILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHR 488
IL A S H V+K VG AL+DAY + G V++A +V + +
Sbjct: 403 VILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 462
Query: 489 DTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASL--VSAATGLGTVETGKQ 548
D + ++++ Q G+ E A+K G + +K +E + +S+ V AAT ++ GKQ
Sbjct: 463 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQ 522
Query: 549 LHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGL 608
HG+++K LD++ V ++L+ +Y K G+++ A + F+ E D+VSWN MIS A +G
Sbjct: 523 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ 582
Query: 609 ISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYV 668
AL F +M+ +K D +TF+ + +AC+ GLV+ G YF M I P +H
Sbjct: 583 AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 642
Query: 669 CLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPY 728
C+VDL RAGQLEKAM+V+E+MP A + I++T+L+AC++H LG A + + + P
Sbjct: 643 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 702
Query: 729 DSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQ 788
DS+ Y+LL+N+Y E AK RKLM +R V+K P SWIE+ +K + F+ GDRSHP
Sbjct: 703 DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPL 762
Query: 789 INDIEEKLEFLKAEFKIRG------VLYHDVENS------SHHSEKLALAFGLVNMPPKA 848
+ I KLE L K G + D+++ + HSE+LA+AFGL+ P +
Sbjct: 763 KDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGS 822
Query: 849 VVRIMKNISICRECHEFILLATKVVEREIVVRDGSRLHVF-KNGSCSC 880
+ I+KN+ +C +CH I L K+ EREIVVRD +R H F +G CSC
Sbjct: 823 PLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
BLAST of Lcy11g001140 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 476.1 bits (1224), Expect = 8.7e-133
Identity = 285/940 (30.32%), Postives = 469/940 (49.89%), Query Frame = 0
Query: 31 SKSLKEGVCVHSPIIKLGLHGNLYLSNNLLTLYAKRFGLKQARNLFDEMPYRDVVSWTAL 90
S L G C H+ I+ + +L NNL+++Y+K L AR +FD+MP RD+VSW ++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 91 QAAYVRNRSYI-----EAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELELGRCVHGHV 150
AAY ++ + +AF LF ++ + TLS +++ C +G + HG+
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 151 IKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLVQAQKWDEAL 210
K G + + L+++Y K KE +F M D V W M+ + ++ +EA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 211 QSYITMMESGIIPNEF-------------------------------------------- 270
SG+ PNE
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 271 -------------------------TFTKLLATA-NFLGLKFGKLLHSHVITLGIDLNVV 330
TF +LATA L G+ +H + LG+DL +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 331 LKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSG 390
+ +L++MY + + A V + E+D+ W S+I+ QN EA+ F ++ G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 391 ILPNSFTYSSVLSACTLIP-SLELGKQIHLQVILVGLEADVCAGSALINMYMKCSDLIDD 450
+ P+ +T +SVL A + +P L L KQ+H+ I + +D +ALI+ Y + + + +
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKE 471
Query: 451 ALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSSILGACSS 510
A +F + ++ W ++++G + + F M G + + FTL+++ C
Sbjct: 472 AEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 531
Query: 511 AKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSL 570
A N+ H Y +K D+ V + ++D Y + G + A ++ D + +T++
Sbjct: 532 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 591
Query: 571 ATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHGYSLKYAL 630
+ + G+ E A MR V DE ++A+L A++ L +E G+Q+H +LK
Sbjct: 592 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 651
Query: 631 DNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSALSAFDD 690
N V SLVD+Y K GS+ DA+ F+ I ++ +WN M+ +A +G L F
Sbjct: 652 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 711
Query: 691 MRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVDLLGRAG 750
M+ G+KPD +TF+ +LSACS GLV + +SM + I+PE++HY CL D LGRAG
Sbjct: 712 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 771
Query: 751 QLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSSFYLLLAN 810
+++A ++ESM EA +Y+TLL+AC++ G+ G+ VA + L+L+P DSS Y+LL+N
Sbjct: 772 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 831
Query: 811 LYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQINDIEEKLEF 870
+Y ++ D R +M+ V+K P SWIE+ +KIH+F+ DRS+ Q I K++
Sbjct: 832 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 891
Query: 871 LKAEFKIRGVLYH------DVENSS------HHSEKLALAFGLVNMPPKAVVRIMKNISI 883
+ + K G + DVE +HSEKLA+AFGL++ PP +R++KN+ +
Sbjct: 892 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 951
BLAST of Lcy11g001140 vs. ExPASy TrEMBL
Match:
A0A6J1CHG9 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011682 PE=3 SV=1)
HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 786/883 (89.01%), Postives = 831/883 (94.11%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
M+CRTVPKFLNRNEL+RLEE+CS LISICNSKSLKEG+CVHSPIIKLGL+GNLYLSNNLL
Sbjct: 1 MICRTVPKFLNRNELNRLEETCSHLISICNSKSLKEGICVHSPIIKLGLYGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
TLYAKRFGLKQARNLFDEMP +DVVSWT +QAAYVRNRSYIEAFELFDLMV LGHCPNEF
Sbjct: 61 TLYAKRFGLKQARNLFDEMPDKDVVSWTTMQAAYVRNRSYIEAFELFDLMVILGHCPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTL+RSCSETGELELG CVHG+ IKGGFESKPVLGCTLID+YAKCDCT+EA EVFRNM
Sbjct: 121 TLSTLLRSCSETGELELGACVHGYAIKGGFESKPVLGCTLIDMYAKCDCTEEACEVFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
D+ADTVTWTA ISSLVQAQKW+EALQ YITM+ESG+ PNEFTFTKLLAT NFL LK+GKL
Sbjct: 181 DNADTVTWTATISSLVQAQKWNEALQLYITMIESGVTPNEFTFTKLLATINFLDLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LH+HVIT G+DLNV+LKT LVDMYSRY ELEDAMKVANQT EKDV LWTSIISCFNQNLK
Sbjct: 241 LHNHVITFGVDLNVLLKTTLVDMYSRYQELEDAMKVANQTAEKDVHLWTSIISCFNQNLK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIA QEMR SGI PNSFTYSSVLSACTLIPSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIATLQEMRISGIPPNSFTYSSVLSACTLIPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMKCSD I+DALRVFRTITSP+VICWTSLISGLAEHGC QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMKCSDSINDALRVFRTITSPNVICWTSLISGLAEHGCEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGACSSAK+QNRTSMFHGY+LK+RAHHDIIVGNALVDAYARS MVD+AWRVI
Sbjct: 421 NSFTLSSILGACSSAKSQNRTSMFHGYILKIRAHHDIIVGNALVDAYARSRMVDEAWRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
TM HRD ITYTSLATR+NQMGDHEMALKTI SMRDDNV+ DEVSLASL+SAATGLGTV+
Sbjct: 481 STMNHRDAITYTSLATRLNQMGDHEMALKTISSMRDDNVRKDEVSLASLISAATGLGTVK 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
G+QLH YSLKY L NTRSVKNSL+DLYGKVG LKDA KAFEEI EPDVVSWNGMIS++A
Sbjct: 541 IGEQLHCYSLKYGLYNTRSVKNSLIDLYGKVGCLKDAQKAFEEITEPDVVSWNGMISVLA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG +SSALSAFD+MRLAGLKPDSITFL ILSACSQGGLVDFGMHYFQSMRE H +EPEL
Sbjct: 601 LNGHVSSALSAFDNMRLAGLKPDSITFLLILSACSQGGLVDFGMHYFQSMREIHYVEPEL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVCLVDLLGRAGQLEKAMEVVESMPFEAD KIYKTLLSACKLH NMLLGEDVARRGLQ
Sbjct: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADAKIYKTLLSACKLHKNMLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLANLYDE NRPDLS +TRKLMRDRGVRKSPSQSW ELS+ IHLFITGDR
Sbjct: 721 LDPYDSSFYLLLANLYDELNRPDLSKETRKLMRDRGVRKSPSQSWTELSNSIHLFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHPQINDI+EKLEFLKAEFK+RG LYH ENSSHHSEKLALAFGL+N+PPKAV+RIMKNI
Sbjct: 781 SHPQINDIQEKLEFLKAEFKVRGFLYHGDENSSHHSEKLALAFGLINLPPKAVIRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHYS 884
SICRECH+FILL TKV EREIVVRDGSRLHVFKNGSCSCRHYS
Sbjct: 841 SICRECHDFILLVTKVAEREIVVRDGSRLHVFKNGSCSCRHYS 883
BLAST of Lcy11g001140 vs. ExPASy TrEMBL
Match:
A0A6J1G1W5 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449930 PE=3 SV=1)
HSP 1 Score: 1512.3 bits (3914), Expect = 0.0e+00
Identity = 753/882 (85.37%), Postives = 812/882 (92.06%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCRTVPKF+N NEL+RLEE CSQLISICNSKSLKEG+CVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAKRFGLKQARNLFDEMP RDVVSWT +QAAYVR+ +Y +AFELFDLM TLG+ PNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTLIRSCSET EL+LG CVHG+ IKGGFESKPVLGCTLIDLYAKCDCTKEAYE FRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DDADTVTWT MISSLVQAQKW EALQ YITM+ESG+ PNEFTFTKLLAT +F+GLK+GKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LHSH+I+LG++LNVVLKTALVDMYS Y ELE A KVANQTPEKDVFLWTSIISCFNQN K
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAF EMR SGI P+SFTYSS LSACTL+PSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMK SDLIDDALRVF +I +PSVICWTSLISGLAEHG QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGAC +N+ SMFHGY+LK A+HDI+VGNALVDAYARSGMVDDA RVI
Sbjct: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
RTMKHRD ITYTSLATR+NQMGDHEMALKTI SMR DNVKMDE+SLASLVSAATG+GT+E
Sbjct: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
GKQLH YSL+Y LDNTRSVKNSLVD YGKVG LKDA KAFEEI EPDVVSWNG+ISI+A
Sbjct: 541 AGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG IS+ALSAFD+MRLAGLKPDSIT LS+LSACSQGGLVDFGMHYFQ+MRETHNIEP L
Sbjct: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPAL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVC++DL GRAGQLEKAME+VE MPFEAD K+YKTLLSACKLH N+LLGEDVARRGLQ
Sbjct: 661 DHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLA+LYDE +RPDLS KTRKLMRDRG+RKSPSQSW+ELS KIH+FITGDR
Sbjct: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHP++ND+EEKLEFL+AEFK RG LY D E+S HHSEKLALAFGLV+MPPK VVRIMKNI
Sbjct: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
SICRECH+FILLATKVVEREIVVRDGSRLHVF NGSCSC+ Y
Sbjct: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 876
BLAST of Lcy11g001140 vs. ExPASy TrEMBL
Match:
A0A6J1HYM3 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467799 PE=3 SV=1)
HSP 1 Score: 1511.5 bits (3912), Expect = 0.0e+00
Identity = 754/883 (85.39%), Postives = 815/883 (92.30%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCRTVPKF+N NEL+RLEE CSQLISICNSKSLKEGVCVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAKRFGLKQARNLFDEMP RDVVSWT +QAAYVR+ +Y +AFELFDLM TLG+ PNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTLIRSCSET EL+LG CVHG+ IKGGFESKPVLGCTLIDLYAKCDCTKEAYE FRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DDADTVTWT MISSLVQAQKW EA Q YITM+ESG+ PNEFTFTKLLAT +F+GLK+GKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEAPQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LHSH+I+LG++LNVVLKTALVDMYS Y ELE AMKVANQTPEKDVFLWTSIISCFNQN K
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAFQEMR SGI P+SFTYSS LSACTL+PSLELGKQIHLQ+IL GLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQIILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMK SDLI+DALRVFR+I +PSVICWTSLISGLAEHG QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMK-SDLIEDALRVFRSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGAC +N+ SMFHGYVLK A+ DI+VGNALVDAYARSGMVDDA RVI
Sbjct: 421 NSFTLSSILGAC-----KNQISMFHGYVLKSMAYQDIVVGNALVDAYARSGMVDDARRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
RTMKHRD ITYTSLATR+NQMGDHEMALKTI SMR DNVKMDE+SLASLVSAATGLGT+E
Sbjct: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGLGTIE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
TGKQLH +SL+Y LDNTRSVKNSLVD YGKVG LKDA KAFEEI EPDVVSWNG+ISI+A
Sbjct: 541 TGKQLHCFSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG IS+ALSAFD+MRLAGL PDSIT LS+LSACSQGGLVDFGMHYFQ+MRETHNIEP L
Sbjct: 601 LNGHISAALSAFDNMRLAGLNPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPAL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYV ++DL GRAGQLEKAME+VESMPFEAD KIYKTLLSACKLH N+LLGEDVARRGL
Sbjct: 661 DHYVRVIDLHGRAGQLEKAMEIVESMPFEADAKIYKTLLSACKLHRNVLLGEDVARRGLH 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLA+LYDE +RPDLS KTRKLMRDRG+RKSPSQSW+ELS KIH+FITGDR
Sbjct: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHP++ND+EEKLEFL+AEFK RG LY D E+S HHSEKLALAFGLV+MPP+AV+RIMKNI
Sbjct: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYRDDEDSCHHSEKLALAFGLVSMPPEAVIRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHYS 884
SICRECH+FI+LATKVVEREIVVRD SRLHVFKNGSCSC+HYS
Sbjct: 841 SICRECHDFIVLATKVVEREIVVRDRSRLHVFKNGSCSCKHYS 877
BLAST of Lcy11g001140 vs. ExPASy TrEMBL
Match:
A0A6P3ZHY3 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107414670 PE=3 SV=1)
HSP 1 Score: 1121.7 bits (2900), Expect = 0.0e+00
Identity = 543/874 (62.13%), Postives = 688/874 (78.72%), Query Frame = 0
Query: 6 VPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLLTLYAK 65
V KF NRN E+SC +++ +CNS+SLKEGVC+HSPIIKLGL NL+L+NNLL+LYAK
Sbjct: 6 VTKFFNRN-----EDSCLKILYLCNSQSLKEGVCIHSPIIKLGLQDNLFLNNNLLSLYAK 65
Query: 66 RFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTL 125
FG +QAR FDEMPYRDVVSWT + +AYVRN + EA ELFD MV GH PN+FTLS++
Sbjct: 66 CFGARQARYFFDEMPYRDVVSWTGILSAYVRNGDHDEALELFDSMVVSGHNPNQFTLSSV 125
Query: 126 IRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADT 185
+RSCS G+ + G H +VIK GFE P+L LID YAKCDC++E+Y +F +MD+ DT
Sbjct: 126 LRSCSALGQFDYGTRAHAYVIKFGFELNPLLCSALIDFYAKCDCSEESYSIFGDMDNGDT 185
Query: 186 VTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKLLHSHV 245
++WT +ISSL QAQKW AL+ YI M+ + + PNEFTF KL A + FLG+ +GKLLH+H+
Sbjct: 186 ISWTTIISSLTQAQKWSLALKHYIDMINARVPPNEFTFVKLFAASCFLGMNYGKLLHAHL 245
Query: 246 ITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAI 305
I LGI L+++LKTAL+DMYS++ ++DA+KV+NQTPE DV LWTS+IS F LK+ EAI
Sbjct: 246 IMLGIRLSLILKTALIDMYSKFQMMDDAIKVSNQTPEYDVQLWTSVISGFTHVLKINEAI 305
Query: 306 AAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMY 365
AA EM+T G +PN+FTYSS+L AC+ SLELGKQIH VI+ G E DVC G+AL++MY
Sbjct: 306 AALHEMKTFGFVPNNFTYSSILKACSTALSLELGKQIHSLVIMTGFEEDVCVGNALVDMY 365
Query: 366 MKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTL 425
KCS L++DAL VFR ITSP+VICWTSLI+G AEHG QD + F+ MQ+AGV+PNSFTL
Sbjct: 366 TKCSTLMEDALIVFRGITSPNVICWTSLIAGFAEHGFEQDSFECFVQMQAAGVRPNSFTL 425
Query: 426 SSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKH 485
S+ L ACS+ K+ +T HGY++K ++ DI+VGNALVDAYA GMVDDAW VIR M H
Sbjct: 426 SATLRACSTVKSYTQTLKLHGYIMKTKSDCDIVVGNALVDAYAALGMVDDAWHVIRMMSH 485
Query: 486 RDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQL 545
RDTITYTSLATR+NQMG HEMA I M +D++KMD SLAS +SA+ L T+ETG+QL
Sbjct: 486 RDTITYTSLATRINQMGHHEMAQDVITHMNNDDIKMDGFSLASFLSASAALATLETGRQL 545
Query: 546 HGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLI 605
H Y+ K L++ SV N+L+D+Y K G DA++AF EI++PDVVSWNG+IS +A NG
Sbjct: 546 HCYAFKSGLNSCISVLNALIDMYWKCGCASDAYRAFGEISDPDVVSWNGLISGLASNGYT 605
Query: 606 SSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVC 665
SSA+SAF+DMRLAG KPDS+T L +L ACS+GGLVD G+ YFQSM+E +++ P LDHYVC
Sbjct: 606 SSAISAFEDMRLAGSKPDSVTLLFVLFACSRGGLVDMGLEYFQSMKEKYDVAPRLDHYVC 665
Query: 666 LVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYD 725
LVDLLGRAG+LE AMEV+ +MPF+ IYKTLL ACKLH N+ LGED+AR+G++LDP D
Sbjct: 666 LVDLLGRAGRLEDAMEVILNMPFKPHPLIYKTLLVACKLHKNLPLGEDMARKGIELDPSD 725
Query: 726 SSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQI 785
+FYLLLA LYD+ + DL+ KTR+LMR+RG+R +PSQSW+EL +K+H FI GDRSHPQI
Sbjct: 726 QAFYLLLAKLYDDSGQSDLAMKTRRLMRERGLRTNPSQSWMELRNKVHTFIAGDRSHPQI 785
Query: 786 NDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNISICRE 845
N+I++K+E L +FK RG L+ D+E SS+HSEKLALAFGL+N P A +RI KN IC E
Sbjct: 786 NEIQDKIESLITKFKHRG-LHEDMEGSSYHSEKLALAFGLLNTPSNAPIRISKNKPICSE 845
Query: 846 CHEFILLATKVVEREIVVRDGSRLHVFKNGSCSC 880
CH+FI+LATK+V+REI+VRDG+R+H FK G CSC
Sbjct: 846 CHDFIMLATKLVDREIIVRDGNRIHAFKKGECSC 873
BLAST of Lcy11g001140 vs. ExPASy TrEMBL
Match:
A0A7N2RAB8 (DYW_deaminase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)
HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 541/882 (61.34%), Postives = 692/882 (78.46%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLC+TV K +R EL+R ++ C +++S+CNSKSLKEGVCVHSPIIK+GL ++YL+NNLL
Sbjct: 1 MLCKTVTKTCHRTELYRFQDICLRVVSLCNSKSLKEGVCVHSPIIKMGLQDDMYLNNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAK FG+ A + FDEMP +DVVSWT + ++YV N ++ +A LFD M+ PNEF
Sbjct: 61 SLYAKCFGVDHAHHFFDEMPCKDVVSWTGILSSYVINENHEQALRLFDSMLNSSQYPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLS+++RSCS GE + G + ++IK GF S P+L LIDLY+KC+CTKEAY+VF +
Sbjct: 121 TLSSVLRSCSALGEFDYGTLIQAYMIKNGFHSNPILASALIDLYSKCNCTKEAYKVFECV 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
D DTV+WT MISSLVQAQKW +ALQ YI M+E + PNEFTF KLLA + LG +GKL
Sbjct: 181 DGGDTVSWTTMISSLVQAQKWSQALQLYIRMIEKKVPPNEFTFVKLLAASGSLGSSYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
+H+H+I LGI+LNV+LKTALVDMYS+ +EDA+KV+NQTPE+DVFLWT+IIS F QN+K
Sbjct: 241 VHAHMILLGIELNVILKTALVDMYSKCHRMEDAVKVSNQTPERDVFLWTAIISGFIQNMK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAA EM SGI+PN+F+YS++L+A + I SLELG+Q+H +VI GLE D+ G+A
Sbjct: 301 VKEAIAALSEMVMSGIVPNNFSYSTILNASSSILSLELGEQVHSRVIKAGLEDDISVGNA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LI+MYMKCS+LID+ALRVFR +TSP+VI WTSLI+G A+HG +D +R F +M++ G+ P
Sbjct: 361 LIDMYMKCSNLIDNALRVFRGVTSPNVITWTSLIAGFAKHGFEEDSFRSFEEMRALGLAP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGACS+ K+ ++T HGY++K++A DI+VGNALVDAYA GMVD+A VI
Sbjct: 421 NSFTLSSILGACSTMKSHSQTMKLHGYIIKIKADCDIVVGNALVDAYAGLGMVDEARCVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
R M HRD ITYTSLATR+NQMG H+ AL+ I M D+VKMD S++S +SAA GLG+++
Sbjct: 481 RKMDHRDAITYTSLATRINQMGYHDRALEIIKYMNKDDVKMDGFSMSSFLSAAAGLGSMK 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
G QLH +S+K L SV N +VDLYGK G + DAH+AF EI EPDV SWNG IS +A
Sbjct: 541 AGMQLHCFSVKSGLRCWLSVSNGVVDLYGKCGCIHDAHRAFGEITEPDVASWNGWISGLA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
NG ISSALSAF+DMRL G+KPD +TFL +L ACS GGLVD G+ YF SMRETH I P+L
Sbjct: 601 SNGYISSALSAFEDMRLVGVKPDLVTFLLVLFACSHGGLVDLGLEYFHSMRETHGIAPQL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVCL+DLLGRAGQLE+AM V+++MPF D IYKTLLSA KLHGN+ LGED+AR+G+
Sbjct: 661 DHYVCLIDLLGRAGQLEEAMGVIKTMPFRPDALIYKTLLSASKLHGNVPLGEDMARQGID 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDP D +FY+LLANLYD R DLS K R LMR+RG+ K+P QSW+E+ ++IH F DR
Sbjct: 721 LDPSDPAFYILLANLYDRSGRSDLSEKARGLMRERGLTKNPCQSWMEIRNQIHHFTAEDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHPQIN I EK+E L EFK RG LY D + S+HSEKLA+AFGL++ P KA + I+K++
Sbjct: 781 SHPQINQIHEKIESLMTEFKYRGYLYRDNRDKSYHSEKLAVAFGLLSTPSKAPILIIKDM 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
IC +CH F++L T++V+REI++R+G+R+H FK G+CSCR Y
Sbjct: 841 RICMDCHYFVMLVTELVDREIILREGNRVHSFKKGNCSCRGY 882
BLAST of Lcy11g001140 vs. NCBI nr
Match:
XP_022141235.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Momordica charantia])
HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 786/883 (89.01%), Postives = 831/883 (94.11%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
M+CRTVPKFLNRNEL+RLEE+CS LISICNSKSLKEG+CVHSPIIKLGL+GNLYLSNNLL
Sbjct: 1 MICRTVPKFLNRNELNRLEETCSHLISICNSKSLKEGICVHSPIIKLGLYGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
TLYAKRFGLKQARNLFDEMP +DVVSWT +QAAYVRNRSYIEAFELFDLMV LGHCPNEF
Sbjct: 61 TLYAKRFGLKQARNLFDEMPDKDVVSWTTMQAAYVRNRSYIEAFELFDLMVILGHCPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTL+RSCSETGELELG CVHG+ IKGGFESKPVLGCTLID+YAKCDCT+EA EVFRNM
Sbjct: 121 TLSTLLRSCSETGELELGACVHGYAIKGGFESKPVLGCTLIDMYAKCDCTEEACEVFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
D+ADTVTWTA ISSLVQAQKW+EALQ YITM+ESG+ PNEFTFTKLLAT NFL LK+GKL
Sbjct: 181 DNADTVTWTATISSLVQAQKWNEALQLYITMIESGVTPNEFTFTKLLATINFLDLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LH+HVIT G+DLNV+LKT LVDMYSRY ELEDAMKVANQT EKDV LWTSIISCFNQNLK
Sbjct: 241 LHNHVITFGVDLNVLLKTTLVDMYSRYQELEDAMKVANQTAEKDVHLWTSIISCFNQNLK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIA QEMR SGI PNSFTYSSVLSACTLIPSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIATLQEMRISGIPPNSFTYSSVLSACTLIPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMKCSD I+DALRVFRTITSP+VICWTSLISGLAEHGC QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMKCSDSINDALRVFRTITSPNVICWTSLISGLAEHGCEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGACSSAK+QNRTSMFHGY+LK+RAHHDIIVGNALVDAYARS MVD+AWRVI
Sbjct: 421 NSFTLSSILGACSSAKSQNRTSMFHGYILKIRAHHDIIVGNALVDAYARSRMVDEAWRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
TM HRD ITYTSLATR+NQMGDHEMALKTI SMRDDNV+ DEVSLASL+SAATGLGTV+
Sbjct: 481 STMNHRDAITYTSLATRLNQMGDHEMALKTISSMRDDNVRKDEVSLASLISAATGLGTVK 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
G+QLH YSLKY L NTRSVKNSL+DLYGKVG LKDA KAFEEI EPDVVSWNGMIS++A
Sbjct: 541 IGEQLHCYSLKYGLYNTRSVKNSLIDLYGKVGCLKDAQKAFEEITEPDVVSWNGMISVLA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG +SSALSAFD+MRLAGLKPDSITFL ILSACSQGGLVDFGMHYFQSMRE H +EPEL
Sbjct: 601 LNGHVSSALSAFDNMRLAGLKPDSITFLLILSACSQGGLVDFGMHYFQSMREIHYVEPEL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVCLVDLLGRAGQLEKAMEVVESMPFEAD KIYKTLLSACKLH NMLLGEDVARRGLQ
Sbjct: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADAKIYKTLLSACKLHKNMLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLANLYDE NRPDLS +TRKLMRDRGVRKSPSQSW ELS+ IHLFITGDR
Sbjct: 721 LDPYDSSFYLLLANLYDELNRPDLSKETRKLMRDRGVRKSPSQSWTELSNSIHLFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHPQINDI+EKLEFLKAEFK+RG LYH ENSSHHSEKLALAFGL+N+PPKAV+RIMKNI
Sbjct: 781 SHPQINDIQEKLEFLKAEFKVRGFLYHGDENSSHHSEKLALAFGLINLPPKAVIRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHYS 884
SICRECH+FILL TKV EREIVVRDGSRLHVFKNGSCSCRHYS
Sbjct: 841 SICRECHDFILLVTKVAEREIVVRDGSRLHVFKNGSCSCRHYS 883
BLAST of Lcy11g001140 vs. NCBI nr
Match:
XP_038874958.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Benincasa hispida])
HSP 1 Score: 1549.3 bits (4010), Expect = 0.0e+00
Identity = 764/883 (86.52%), Postives = 815/883 (92.30%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCR VPK LNRNEL+RLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL
Sbjct: 1 MLCRAVPKLLNRNELYRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
LYAKRFGLKQARNLFDEMP RDVVSWT +QAAYVRNRSYIEAFELFDLM+TLGHCPNEF
Sbjct: 61 ALYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRNRSYIEAFELFDLMLTLGHCPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLS LIRSCSETGELELG CVHG+VIKGGFE+KPVLGCTLI+LYAKCD ++EAYEVFRNM
Sbjct: 121 TLSNLIRSCSETGELELGSCVHGYVIKGGFETKPVLGCTLINLYAKCDFSEEAYEVFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DD DTVTWT MISSLVQAQKWDEALQ YITMM SG+ PNEFTFTKLLAT NFLGLK+GKL
Sbjct: 181 DDVDTVTWTVMISSLVQAQKWDEALQLYITMMNSGVTPNEFTFTKLLATTNFLGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LH H+ITLG++LNVVLKTALVD+YSRY ELEDAMKVANQTPEKDVFLWTSIIS FNQNLK
Sbjct: 241 LHCHMITLGVNLNVVLKTALVDVYSRYQELEDAMKVANQTPEKDVFLWTSIISFFNQNLK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAFQEMR SGILPNSFTYSS LSACT IPSL+LGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGILPNSFTYSSALSACTSIPSLKLGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMKCS+ IDDALRVFRTITSPSVICWTSLISGLAEHGC QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMKCSNFIDDALRVFRTITSPSVICWTSLISGLAEHGCEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
N+FTLSSILGA SSAK+QN+TSMFHGY+LK+RAHHDI+VGNALVDAYARS VDDA RVI
Sbjct: 421 NAFTLSSILGASSSAKSQNQTSMFHGYILKMRAHHDIVVGNALVDAYARSAKVDDACRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
TM HRD ITYTSLATR+NQMGDHEMALK I SMR DNV+MDE+SL SLVSA TGLG VE
Sbjct: 481 STMNHRDAITYTSLATRLNQMGDHEMALKIIDSMRADNVEMDEISLTSLVSALTGLGIVE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
TGKQLH YSLKY LDNT SVKNSL+DLYGKVG LKDA+K FEEI++PDVVSWNGMISI+A
Sbjct: 541 TGKQLHCYSLKYGLDNTCSVKNSLMDLYGKVGCLKDANKVFEEISKPDVVSWNGMISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
NG ISSAL+AFD+MRLAGL+PDSITFLSILSACSQGGLVDFGMHYF SM+ TH IEPEL
Sbjct: 601 FNGHISSALAAFDNMRLAGLEPDSITFLSILSACSQGGLVDFGMHYFHSMKATHKIEPEL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHY C++DLLGR GQLE AME+VESMP+EAD KIYKTLL AC HGNMLLGEDVA RGLQ
Sbjct: 661 DHYACIIDLLGRVGQLENAMEIVESMPYEADAKIYKTLLKACNFHGNMLLGEDVAIRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
L+P DSSFYLLLANLYD +NR DLSAKTRKLMRDRGVRKSP QSWIEL SKIHLF+TG+R
Sbjct: 721 LNPNDSSFYLLLANLYDGYNRQDLSAKTRKLMRDRGVRKSPGQSWIELHSKIHLFVTGER 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
+HPQINDI+EKLEFL+AEFK RG +YH+ ENSSHHSEKLALAFGLVN+PP AVVRIMKNI
Sbjct: 781 THPQINDIQEKLEFLRAEFKSRGFMYHEDENSSHHSEKLALAFGLVNLPPTAVVRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHYS 884
SICRECH+FILL TKVVEREI+VRDG LHV KNGSCSC HYS
Sbjct: 841 SICRECHDFILLVTKVVEREIIVRDGRGLHVLKNGSCSCSHYS 883
BLAST of Lcy11g001140 vs. NCBI nr
Match:
KAG6574209.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1516.9 bits (3926), Expect = 0.0e+00
Identity = 754/882 (85.49%), Postives = 816/882 (92.52%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCRTVPKF+N NEL+RLEE CSQLISICNSKSLKEGVCVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAKRFGLKQARNLFDEMP RDVVSWT +QAAYVR+ +Y +AFELFDLM TLG+ PNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTLIRSCSET EL+LG CVHG+ IKGGFESKPVLGCTLIDLYAKCDCTK+AYE FRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DDADTVTWT MISSLVQAQKW EALQ YITM+ESG+ PNEFTFTKLLAT +F+GLK+GKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LHSH+I+LG++LNVVLKTALVDMYS Y ELE AMKVANQTPEKDVFLWTSIISCFNQN K
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAFQEMR SGI P+SFTYSS LSACTL+PSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMK SDLIDDALRVF +I +PSVICWTSLISGLAEHG QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGAC +N+ SMFHGY+LK A+HDI+VGNALVDAYARSGMVDDA RVI
Sbjct: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
RTMKHRD ITYTSLATR+NQMGDHEMALKTI SMR DNVKMDE+SLASLVSAATG+GT+E
Sbjct: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
TGKQLH YSL+Y LDNTRSVKNSLVD YGKVG LKDA KAFEEI EPDVVSWNG+ISI+A
Sbjct: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG IS+ALSAFD+MRLAGLKPDSIT LS+LSACSQG LVDFGMHYFQ+MRETHNIEP L
Sbjct: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVC++DL GRAGQLEKAME+VE+MPFEAD K+YKTLLSACKLH N+LLGEDVARRGLQ
Sbjct: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLA+LYDE +RPDLS KTRKLM+DRG+RKSPSQSW+ELS KIH+FITGDR
Sbjct: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHP++ND+EEKLEFL+AEFK RG LY D E+S HHSEKLALAFGLV+MPPK VVRIMKNI
Sbjct: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
SICRECH+FILLATKV+EREIVVRDGSRLHVF NGSCSC+HY
Sbjct: 841 SICRECHDFILLATKVLEREIVVRDGSRLHVFNNGSCSCKHY 876
BLAST of Lcy11g001140 vs. NCBI nr
Match:
XP_023542503.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1516.1 bits (3924), Expect = 0.0e+00
Identity = 756/882 (85.71%), Postives = 816/882 (92.52%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCRTVPKF+N NEL+RLEE CSQLISICNSKSLKEGVCVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAKRFG+KQARNLFDEMP RDVVSWT +QAAYVR+ +Y +AFELFDLM TLG+ PNEF
Sbjct: 61 SLYAKRFGIKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTLIRSCSET EL+LG CVHG+ IKGGFESKPVLGCTLIDLYAKCDCT+EAYE FRNM
Sbjct: 121 TLSTLIRSCSETRELKLGGCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTEEAYETFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DDADTVTWT MISSLVQAQKW EALQ YITM+ESG+ PNEFTFTKLLAT +F+GLK+GKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LHSH+I+LG++LNVVLKTALVDMYS Y ELE AMKVANQTPEKDVFLWTSIISCF+QN K
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFSQNSK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAFQEMR SGI P+SFTYSS LSACTL+PSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMK SDLIDDALRVF +I +PSVICWTSLISGLAEHG QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGAC +N+ SMFHGY+LK A+HDI+VGNALVDAYARS MVDDA RVI
Sbjct: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDAYARSKMVDDARRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
RTMKHRD ITYTSLATR+NQMGDHEMALKTI SMR DNVKMDE+SLASLVSAATG+GT+E
Sbjct: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
TGKQLH YSL+Y LDNTRSVKNSLVD YGKVG LKDA KAFEEI EPDVVS NG+ISI+A
Sbjct: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSCNGLISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG IS+ALSAFD+MRLAGLKPDSIT LS+LSACSQGGLVDFGMHYFQ+MRETHNIEP L
Sbjct: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPAL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVC++DL GRAGQLEKAME+VESMPFEAD KIY+TLLSACKLH N+LLGEDVARRGLQ
Sbjct: 661 DHYVCVIDLHGRAGQLEKAMEIVESMPFEADAKIYRTLLSACKLHRNVLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLA+LYDE +RPDLS KTRKLMRDRG+RKSPSQSW+ELS KIH+FITGDR
Sbjct: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHP+IND+EEKLEFL+AEFK RG LYHD E+S HHSEKLALAFGLV+MPPK VVRIMKNI
Sbjct: 781 SHPEINDMEEKLEFLRAEFKSRGFLYHDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
SICRECH+FILLATKVVEREIVVRDGSRLHV KNGSCSC+HY
Sbjct: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVLKNGSCSCKHY 876
BLAST of Lcy11g001140 vs. NCBI nr
Match:
KAG7013273.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1514.6 bits (3920), Expect = 0.0e+00
Identity = 753/882 (85.37%), Postives = 814/882 (92.29%), Query Frame = 0
Query: 1 MLCRTVPKFLNRNELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLL 60
MLCRTVPKF+N NEL+RLEE CSQLISICNSKSLKEGVCVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 TLYAKRFGLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEF 120
+LYAKRFGLKQARNLFDEMP RDVVSWT +QAAYVR+ +Y +AFELFDLM TLG+ PNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNM 180
TLSTLIRSCSET EL+LG CVHG+ IKGGFESKPVLGCTLIDLYAKCDCTK+AYE FRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
Query: 181 DDADTVTWTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKL 240
DDADTVTWT MISSLVQAQKW EALQ YITM+ESG+ PNEFTFTKLLAT +F+GLK+GKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHVITLGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLK 300
LHSH+I+LG++LNVVLKTALVDMYS Y ELE A+KVANQTPEKDVFLWTSIISCFNQN K
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSA 360
VKEAIAAFQEMR SGI P+SFTYSS LSACTL+PSLELGKQIHLQVIL GLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKCSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQP 420
LINMYMK SDLIDDALRVF +I +PSVICWTSLISGLAEHG QDCYRYFLDMQ+AGVQP
Sbjct: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVI 480
NSFTLSSILGAC +N+ SMFHGY+LK A+HDI+VGNALVD YARSGMVDDA RVI
Sbjct: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
Query: 481 RTMKHRDTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVE 540
RTMKHRD ITYTSLATR+NQMGDHEMALKTI SMR DNVKMDE+SLASLVSAATG+GT+E
Sbjct: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
Query: 541 TGKQLHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVA 600
TGKQLH YSL+Y LDNTRSVKNSLVD YGKVG LKDA KAFEEI EPDVVSWNG+ISI+A
Sbjct: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
Query: 601 LNGLISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPEL 660
LNG IS+ALSAFD+MRLAGLKPDSIT LS+LSACSQG LVDFGMHYFQ+MRETHNIEP L
Sbjct: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
Query: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQ 720
DHYVC++DL GRAGQLEKAME+VE+MPFEAD K+YKTLLSACKLH N+LLGEDVARRGLQ
Sbjct: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDR 780
LDPYDSSFYLLLA+LYDE +RPDLS KTRKLM+DRG+RKSPSQSW+ELS KIH+FITGDR
Sbjct: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
Query: 781 SHPQINDIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNI 840
SHP++ND+EEKLEFL+AEFK RG LY D E+S HHSEKLALAFGLV MPPK VVRIMKNI
Sbjct: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNI 840
Query: 841 SICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
SICRECH+FILLATKVVEREIVVRDGSRLHVF NGSCSC+HY
Sbjct: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 876
BLAST of Lcy11g001140 vs. TAIR 10
Match:
AT5G52850.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 902.1 bits (2330), Expect = 3.5e-262
Identity = 442/874 (50.57%), Postives = 616/874 (70.48%), Query Frame = 0
Query: 9 FLNR-NELHRLEESCSQLISICNSKSLKEGVCVHSPIIKLGLHGNLYLSNNLLTLYAKRF 68
FL+R NEL L++SC +++S C S S + G+ +H P+IK GL NL L NNLL+LY K
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 69 GLKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIR 128
G+ AR LFDEM +R V +WT + +A+ +++ + A LF+ M+ G PNEFT S+++R
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 129 SCSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVT 188
SC+ ++ G VHG VIK GFE V+G +L DLY+KC KEA E+F ++ +ADT++
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 189 WTAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKFGKLLHSHVIT 248
WT MISSLV A+KW EALQ Y M+++G+ PNEFTF KLL ++FLGL+FGK +HS++I
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIV 252
Query: 249 LGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAA 308
GI LNVVLKT+LVD YS++ ++EDA++V N + E+DVFLWTS++S F +NL+ KEA+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 309 FQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMK 368
F EMR+ G+ PN+FTYS++LS C+ + SL+ GKQIH Q I VG E G+AL++MYMK
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 369 CSDLIDDALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSS 428
CS +A RVF + SP+V+ WT+LI GL +HG QDC+ ++M V+PN TLS
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 429 ILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRD 488
+L ACS + R H Y+L+ +++VGN+LVDAYA S VD AW VIR+MK RD
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 489 TITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHG 548
ITYTSL TR N++G HEMAL I M D ++MD++SL +SA+ LG +ETGK LH
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 549 YSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISS 608
YS+K SV NSLVD+Y K GSL+DA K FEEIA PDVVSWNG++S +A NG ISS
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 609 ALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLV 668
ALSAF++MR+ +PDS+TFL +LSACS G L D G+ YFQ M++ +NIEP+++HYV LV
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 669 DLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSS 728
+LGRAG+LE+A VVE+M + + I+KTLL AC+ GN+ LGED+A +GL L P D +
Sbjct: 673 GILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPA 732
Query: 729 FYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSH-PQIN 788
Y+LLA+LYDE +P+L+ KTR LM ++ + K +S +E+ K+H F++ D + + N
Sbjct: 733 LYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTN 792
Query: 789 DIEEKLEFLKAEFKIRGVLYHDVENSSHHSEKLALAFGLVNMPPKAVVRIMKNISICREC 848
I ++E +K E K G Y EN+S HS K A+ +G + P+A V ++KN +C++C
Sbjct: 793 GIYAEIESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 849 HEFILLATKVVEREIVVRDGSRLHVFKNGSCSCR 881
HEF+ + T++V+++I VRDG+++H+FKNG CSC+
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
BLAST of Lcy11g001140 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 527.7 bits (1358), Expect = 1.8e-149
Identity = 284/879 (32.31%), Postives = 477/879 (54.27%), Query Frame = 0
Query: 19 EESCSQLISICNSKSLKEGVC--VHSPIIKLGLHGNLYLSNNLLTLYAKRFGLKQARNLF 78
E + S ++ C S+ V +H+ I+ GL + + N L+ LY++ + AR +F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 79 DEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELE 138
D + +D SW A+ + +N EA LF M LG P + S+++ +C + LE
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 139 LGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLV 198
+G +HG V+K GF S + L+ LY A +F NM D VT+ +I+ L
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 199 QAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGLKF-GKLLHSHVITLGIDLNVV 258
Q ++A++ + M G+ P+ T L+ + G F G+ LH++ LG N
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 259 LKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSG 318
++ AL+++Y++ ++E A+ +T ++V LW ++ + ++ + F++M+
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 319 ILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMKCSDLIDDA 378
I+PN +TY S+L C + LELG+QIH Q+I + + S LI+MY K L D A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL-DTA 545
Query: 379 LRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSSILGACSSA 438
+ V+ WT++I+G ++ F M G++ + L++ + AC+
Sbjct: 546 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 605
Query: 439 KAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSLA 498
+A H D+ NALV Y+R G +++++ + D I + +L
Sbjct: 606 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 665
Query: 499 TRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHGYSLKYALD 558
+ Q G++E AL+ M + + + + S V AA+ ++ GKQ+H K D
Sbjct: 666 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 725
Query: 559 NTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSALSAFDDM 618
+ V N+L+ +Y K GS+ DA K F E++ + VSWN +I+ + +G S AL +FD M
Sbjct: 726 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 785
Query: 619 RLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVDLLGRAGQ 678
+ ++P+ +T + +LSACS GLVD G+ YF+SM + + P+ +HYVC+VD+L RAG
Sbjct: 786 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 845
Query: 679 LEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSSFYLLLANL 738
L +A E ++ MP + D +++TLLSAC +H NM +GE A L+L+P DS+ Y+LL+NL
Sbjct: 846 LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 905
Query: 739 YDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQINDIEE----- 798
Y + D TR+ M+++GV+K P QSWIE+ + IH F GD++HP ++I E
Sbjct: 906 YAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 965
Query: 799 -----KLEFLKAEFKIRGVLYHDVENS--SHHSEKLALAFGLVNMPPKAVVRIMKNISIC 858
++ +++ F + L H+ ++ HSEKLA++FGL+++P + +MKN+ +C
Sbjct: 966 TKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1025
Query: 859 RECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
+CH +I +KV REI+VRD R H F+ G+CSC+ Y
Sbjct: 1026 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
BLAST of Lcy11g001140 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 503.1 bits (1294), Expect = 4.7e-142
Identity = 271/827 (32.77%), Postives = 466/827 (56.35%), Query Frame = 0
Query: 87 WTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELELGRCVHGHVI 146
W L + VR+ EA + M+ LG P+ + L+++ ++ ++ELG+ +H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLVQAQKWDEAL 206
K G+ V + TL++LY KC Y+VF + + + V+W ++ISSL +KW+ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 207 QSYITMMESGIIPNEFTFTKLLATANFL----GLKFGKLLHSHVITLGIDLNVVLKTALV 266
+++ M++ + P+ FT ++ + L GL GK +H++ + G +LN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244
Query: 267 DMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSGILPNSF 326
MY + G+L + + +D+ W +++S QN ++ EA+ +EM G+ P+ F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304
Query: 327 TYSSVLSACTLIPSLELGKQIHLQVILVG-LEADVCAGSALINMYMKCSDLIDDALRVFR 386
T SSVL AC+ + L GK++H + G L+ + GSAL++MY C ++ RVF
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL-SGRRVFD 364
Query: 387 TITSPSVICWTSLISGLAEHGCAQDCYRYFLDM-QSAGVQPNSFTLSSILGACSSAKAQN 446
+ + W ++I+G +++ ++ F+ M +SAG+ NS T++ ++ AC + A +
Sbjct: 365 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 424
Query: 447 RTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSLATRMN 506
R HG+V+K D V N L+D Y+R G +D A R+ M+ RD +T+ ++ T
Sbjct: 425 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 484
Query: 507 QMGDHEMALKTIGSMRD-----------DNVKMDEVSLASLVSAATGLGTVETGKQLHGY 566
HE AL + M++ ++K + ++L +++ + L + GK++H Y
Sbjct: 485 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 544
Query: 567 SLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSA 626
++K L +V ++LVD+Y K G L+ + K F++I + +V++WN +I ++G A
Sbjct: 545 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 604
Query: 627 LSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVD 686
+ M + G+KP+ +TF+S+ +ACS G+VD G+ F M+ + +EP DHY C+VD
Sbjct: 605 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 664
Query: 687 LLGRAGQLEKAMEVVESMPFEAD-TKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSS 746
LLGRAG++++A +++ MP + + + +LL A ++H N+ +GE A+ +QL+P +S
Sbjct: 665 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 724
Query: 747 FYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQIND 806
Y+LLAN+Y D + + R+ M+++GVRK P SWIE ++H F+ GD SHPQ
Sbjct: 725 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 784
Query: 807 IEEKLEFLKAEFKIRG------VLYHDVENSSH------HSEKLALAFGLVNMPPKAVVR 866
+ LE L + G + H+VE HSEKLA+AFG++N P ++R
Sbjct: 785 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIR 844
Query: 867 IMKNISICRECHEFILLATKVVEREIVVRDGSRLHVFKNGSCSCRHY 883
+ KN+ +C +CH +K+V+REI++RD R H FKNG+CSC Y
Sbjct: 845 VAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
BLAST of Lcy11g001140 vs. TAIR 10
Match:
AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 483.0 bits (1242), Expect = 5.0e-136
Identity = 288/828 (34.78%), Postives = 452/828 (54.59%), Query Frame = 0
Query: 69 LKQARNLFDEMPYRDVVSWTALQAAYVRNRSYIEAFELFDLMVTLGHCPNEFTLSTLIRS 128
L A NLFD+ P RD S+ +L + R+ EA LF + LG + S++++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 129 CSETGELELGRCVHGHVIKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTW 188
+ + GR +H IK GF +G +L+D Y K K+ +VF M + + VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 189 TAMISSLVQAQKWDEALQSYITMMESGIIPNEFTFTKLLATANFLGL-KFGKLLHSHVIT 248
T +IS + DE L ++ M G PN FTF L G+ G +H+ V+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 249 LGIDLNVVLKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAA 308
G+D + + +L+++Y + G + A + ++T K V W S+IS + N EA+
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 309 FQEMRTSGILPNSFTYSSVLSACTLIPSLELGKQIHLQVILVGLEADVCAGSALINMYMK 368
F MR + + + +++SV+ C + L +Q+H V+ G D +AL+ Y K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 369 CSDLIDDALRVFRTI-TSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLS 428
C+ ++ DALR+F+ I +V+ WT++ISG ++ ++ F +M+ GV+PN FT S
Sbjct: 343 CTAML-DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 402
Query: 429 SILGACSSAKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHR 488
IL A S H V+K VG AL+DAY + G V++A +V + +
Sbjct: 403 VILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 462
Query: 489 DTITYTSLATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASL--VSAATGLGTVETGKQ 548
D + ++++ Q G+ E A+K G + +K +E + +S+ V AAT ++ GKQ
Sbjct: 463 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQ 522
Query: 549 LHGYSLKYALDNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGL 608
HG+++K LD++ V ++L+ +Y K G+++ A + F+ E D+VSWN MIS A +G
Sbjct: 523 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ 582
Query: 609 ISSALSAFDDMRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYV 668
AL F +M+ +K D +TF+ + +AC+ GLV+ G YF M I P +H
Sbjct: 583 AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 642
Query: 669 CLVDLLGRAGQLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPY 728
C+VDL RAGQLEKAM+V+E+MP A + I++T+L+AC++H LG A + + + P
Sbjct: 643 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 702
Query: 729 DSSFYLLLANLYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQ 788
DS+ Y+LL+N+Y E AK RKLM +R V+K P SWIE+ +K + F+ GDRSHP
Sbjct: 703 DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPL 762
Query: 789 INDIEEKLEFLKAEFKIRG------VLYHDVENS------SHHSEKLALAFGLVNMPPKA 848
+ I KLE L K G + D+++ + HSE+LA+AFGL+ P +
Sbjct: 763 KDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGS 822
Query: 849 VVRIMKNISICRECHEFILLATKVVEREIVVRDGSRLHVF-KNGSCSC 880
+ I+KN+ +C +CH I L K+ EREIVVRD +R H F +G CSC
Sbjct: 823 PLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
BLAST of Lcy11g001140 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 476.1 bits (1224), Expect = 6.1e-134
Identity = 285/940 (30.32%), Postives = 469/940 (49.89%), Query Frame = 0
Query: 31 SKSLKEGVCVHSPIIKLGLHGNLYLSNNLLTLYAKRFGLKQARNLFDEMPYRDVVSWTAL 90
S L G C H+ I+ + +L NNL+++Y+K L AR +FD+MP RD+VSW ++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 91 QAAYVRNRSYI-----EAFELFDLMVTLGHCPNEFTLSTLIRSCSETGELELGRCVHGHV 150
AAY ++ + +AF LF ++ + TLS +++ C +G + HG+
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 151 IKGGFESKPVLGCTLIDLYAKCDCTKEAYEVFRNMDDADTVTWTAMISSLVQAQKWDEAL 210
K G + + L+++Y K KE +F M D V W M+ + ++ +EA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 211 QSYITMMESGIIPNEF-------------------------------------------- 270
SG+ PNE
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 271 -------------------------TFTKLLATA-NFLGLKFGKLLHSHVITLGIDLNVV 330
TF +LATA L G+ +H + LG+DL +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 331 LKTALVDMYSRYGELEDAMKVANQTPEKDVFLWTSIISCFNQNLKVKEAIAAFQEMRTSG 390
+ +L++MY + + A V + E+D+ W S+I+ QN EA+ F ++ G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 391 ILPNSFTYSSVLSACTLIP-SLELGKQIHLQVILVGLEADVCAGSALINMYMKCSDLIDD 450
+ P+ +T +SVL A + +P L L KQ+H+ I + +D +ALI+ Y + + + +
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKE 471
Query: 451 ALRVFRTITSPSVICWTSLISGLAEHGCAQDCYRYFLDMQSAGVQPNSFTLSSILGACSS 510
A +F + ++ W ++++G + + F M G + + FTL+++ C
Sbjct: 472 AEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 531
Query: 511 AKAQNRTSMFHGYVLKLRAHHDIIVGNALVDAYARSGMVDDAWRVIRTMKHRDTITYTSL 570
A N+ H Y +K D+ V + ++D Y + G + A ++ D + +T++
Sbjct: 532 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 591
Query: 571 ATRMNQMGDHEMALKTIGSMRDDNVKMDEVSLASLVSAATGLGTVETGKQLHGYSLKYAL 630
+ + G+ E A MR V DE ++A+L A++ L +E G+Q+H +LK
Sbjct: 592 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 651
Query: 631 DNTRSVKNSLVDLYGKVGSLKDAHKAFEEIAEPDVVSWNGMISIVALNGLISSALSAFDD 690
N V SLVD+Y K GS+ DA+ F+ I ++ +WN M+ +A +G L F
Sbjct: 652 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 711
Query: 691 MRLAGLKPDSITFLSILSACSQGGLVDFGMHYFQSMRETHNIEPELDHYVCLVDLLGRAG 750
M+ G+KPD +TF+ +LSACS GLV + +SM + I+PE++HY CL D LGRAG
Sbjct: 712 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 771
Query: 751 QLEKAMEVVESMPFEADTKIYKTLLSACKLHGNMLLGEDVARRGLQLDPYDSSFYLLLAN 810
+++A ++ESM EA +Y+TLL+AC++ G+ G+ VA + L+L+P DSS Y+LL+N
Sbjct: 772 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 831
Query: 811 LYDEFNRPDLSAKTRKLMRDRGVRKSPSQSWIELSSKIHLFITGDRSHPQINDIEEKLEF 870
+Y ++ D R +M+ V+K P SWIE+ +KIH+F+ DRS+ Q I K++
Sbjct: 832 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 891
Query: 871 LKAEFKIRGVLYH------DVENSS------HHSEKLALAFGLVNMPPKAVVRIMKNISI 883
+ + K G + DVE +HSEKLA+AFGL++ PP +R++KN+ +
Sbjct: 892 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 951
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FLX6 | 4.9e-261 | 50.57 | Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidop... | [more] |
| Q9SVP7 | 2.5e-148 | 32.31 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| Q7Y211 | 6.6e-141 | 32.77 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
| Q9ZUW3 | 7.1e-135 | 34.78 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... | [more] |
| Q9SMZ2 | 8.7e-133 | 30.32 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CHG9 | 0.0e+00 | 89.01 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Momordic... | [more] |
| A0A6J1G1W5 | 0.0e+00 | 85.37 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbit... | [more] |
| A0A6J1HYM3 | 0.0e+00 | 85.39 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbit... | [more] |
| A0A6P3ZHY3 | 0.0e+00 | 62.13 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Ziziphus... | [more] |
| A0A7N2RAB8 | 0.0e+00 | 61.34 | DYW_deaminase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022141235.1 | 0.0e+00 | 89.01 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Momordica ... | [more] |
| XP_038874958.1 | 0.0e+00 | 86.52 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Benincasa ... | [more] |
| KAG6574209.1 | 0.0e+00 | 85.49 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| XP_023542503.1 | 0.0e+00 | 85.71 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita ... | [more] |
| KAG7013273.1 | 0.0e+00 | 85.37 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G52850.1 | 3.5e-262 | 50.57 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G13650.1 | 1.8e-149 | 32.31 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G57430.1 | 4.7e-142 | 32.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G27610.1 | 5.0e-136 | 34.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G33170.1 | 6.1e-134 | 30.32 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
