Lcy11g000620 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g000620
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr11: 598280 .. 602014 (-)
RNA-Seq ExpressionLcy11g000620
SyntenyLcy11g000620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCACCGTCTCTCTGAAATCCGGCGAAATTTATCGATGGCTTTATCGAAGCCGACATTCTTTACGCACCTCAAAACCCTAACCGGATCCCACCATTTACTCCGGCACCAAGCTCCGGCTCCTCCCGTCGTCACCCTCCGTTTTCTCTCTTTTGCTTCACCGGAGGAAGCTGCCGCCGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCCCCACTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAGCCTCAAACCCCTCAAAACCCTAATGCTCCCAAACTCCCTGAGCATATCTCTGCCCTCTCTGGTAATCGGCTTAACCTCCACAACCGTATTCTCACTCTCATTCGAGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGCCCTACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAGTATTCCGATTTGCTTTCACTTCACCGGTTTATTACGCAGGCTGGTGTCGCCCCTAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACTGCAATGGAACACTACAAGCAATTGATCAATGACGCGCCTTTTAATCCGTCGCCGACGACTTACAGGATCTTGGTTAAAGGGCTGGTAGATAATAACAAGTTGGAAAGGGCAATGGAGCTGAAAGAGGAAATGATTGTGAAAGGTTTTGTTCCAGACCCTACTATTTATCATTATCTGATGGTGGGCTGTGTGAAAAGCTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAGGAGAAATTAGGAGGGGCTGTGGAAGATGGAGTTGTTTATGGAAGCTTGATGAAAGGGTACTTTATGAAAGGAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTTGGTGTCAATTCAGTGGTGAAGATGAGCGCTATTGCATACAATTCTGTGCTTGATGCATTATGCAAGAATGGAAAGTTTGGTGAGGCTTTGATGTTGTTTGATAGGATGATTAAGGAGCATTGTCCGCCTAGACGTTTGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCACAGAAGGAAGATTCAAAGATGCCATTGAAATATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAAGCACTTTATGGAACAATGGGTGATAAGGGTGTGAACCCTGACGAGTTTACTTATAGCTTGTTGATGGATTCTTGCTTTAAAGAGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTGGAGTCCGGACTTAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGAGAAGATTAACGAGGCAAAGTCTTTCTTTGACTTGATGGTGAAGAAGCTCAAGATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTGAGTGAATCCGGGAAACTGGATGAAATACTAAATGTGGTCGATACTCTTCTGGATGATGATGGGATTGAATTTACTGAGGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGATAGGGAAGGGGATTTAGCTAAACTTATAGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAAGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTTTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCACAAGGCACTGGTGATGCAGATCAGGCTACTGCAGGGAACGAAATGCAATCTGGTCAAGAAGATAGTGGTAAAACAGAACTTGCGGAATCTAATCCTTGAAGGGGCATAGTAGAGGAAAAAAGTATCGACAAGTGAGAATTGAACTGTTTCAGATATTAAAGAGGATGCAACTTACCAGGTGAAAGCTCACATAAGCTTTCTATTTTTTGTTGTTACTTCACATGGGAATGAGATCCGCTTTCTGTTTCTGTTAACTTTCTATTATTTGTTGCTATTTTACATGGGAATGTGATCCGCTCTCTGTTTCTCTTAACCAATTAGGCATGAGAAACCTGTACAATAAAAAAGAGTTCTAAGAGTCAACCTGTTTATGTGCATCTCTTGATAATGAAGTTCTAAATTCTATCTGGATCTTAAACATTTATGTTTCTAATGTACTTGTCCAATCTGTCAGAACTTCCACTTCTAAAGGGAAACGTCCATGAAACTAATTCGATGCACAATCATTCATGTGCGTAAAACCCGATGATGGAGTTTCTTCTGTAGGATGGCGAAAGCAAGGATCCACACAAATCTTCTAACTTAGTGAATGTTTTTTATTTTTATTTTTTACATGTAAGAGTGGGGGATTGAAACTGTGACCTCTTGATCGAGGGGCTTTATGTCAATTGAATCATGTTTTTGTTGGCCTAAGTTCATGAATGTTATTACAACTTTAGCAAACATCTTTCATTGGAAGATCAAGAATTATCAATATCATTGGTATTTTACAATTAAAAAATCACCCGTTACAATATATGAGGAAAGGTAAAGAATAGGTACAAAGCAAAGCAGTGTCTAAAACACACAAAACGGCAGGCCTTGAGTAACACTTCACTTTTAGCTACAAAGGTTCGGTATGCAGACCCCAGCATCTGGGTTTTGTTCCTTCCATATCCTTCCTGTAACTCTCAGCTTCAGTTCCTTTCTATCCCCACCAGAGAAGAAAAGAGCCATATTTCTCTGAATGATCAATCCATCGTGGCTGTCCCTGACTTTTCGATGACTATCTCTAATACTTCGTGGTGTACCCTCCCATATCAGTTTCCGCCCATATCCACCAACCTCGAGACTGTAGCTGTAGGTTCGAGCCTCATTCTCATCACCCATGAATCGAAGGAAAGCCATGTAGACTGGGGCCATGCCAAGCTGAAAGGCTTCAAAGTGAAGGCAGAAGTATTGACCGAAACAATGAAAAACCTGCAAAATGTGAGAAGAGCAAGCCACAAGAAACGGGATCAATCTAAAATATGGATTTAACCCTGAGGAATGTCCAGCAGAATGAGTCTCCTTCTGGCGCGAAGGCCTTATTTGATCAAACACATAACAAGCCATATATGGCATTTATGGGTAGTTTTGGCATCCCGTGACCTTATTAGCTTTCGTTTGTACAGATTTGAGAGAAACACTTGAACCGCAAAAGCATAAATCCATCACTTGGGGTAAAAGGAAACTGAAAAAAATTATATAAAAACATGTACAATCCTTTGATAATTCAATCATCAAACACAGTGAAGGTCAAAGTTCCATAAAATAAAATAAAATGATCCATTACCAAATTTCTAATCAACTTGCAGCTTTGATGGGCTATAAAACTTGCAGCACGTTATGTAATAACGGACTTTTCATCATCTTTCTTTTGTTTTCAACTAGTTGTTGACTTCTTCTAATCTCCCAGAATTTCATAGTTTGGTTTGAAACCCTTGTCCTCCCCATACCTTAATAGATATCGAGCGACACCACAGATACATACATACATATTTACATAAACATACAGACGTGTGCATACAAATCTATCACAGGTAAGGATCGATTCACGTAGATAAACTAAGTTCTACCAAAGAAAGAGAAAATGAGAAT

mRNA sequence

CCTCACCGTCTCTCTGAAATCCGGCGAAATTTATCGATGGCTTTATCGAAGCCGACATTCTTTACGCACCTCAAAACCCTAACCGGATCCCACCATTTACTCCGGCACCAAGCTCCGGCTCCTCCCGTCGTCACCCTCCGTTTTCTCTCTTTTGCTTCACCGGAGGAAGCTGCCGCCGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCCCCACTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAGCCTCAAACCCCTCAAAACCCTAATGCTCCCAAACTCCCTGAGCATATCTCTGCCCTCTCTGGTAATCGGCTTAACCTCCACAACCGTATTCTCACTCTCATTCGAGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGCCCTACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAGTATTCCGATTTGCTTTCACTTCACCGGTTTATTACGCAGGCTGGTGTCGCCCCTAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACTGCAATGGAACACTACAAGCAATTGATCAATGACGCGCCTTTTAATCCGTCGCCGACGACTTACAGGATCTTGGTTAAAGGGCTGGTAGATAATAACAAGTTGGAAAGGGCAATGGAGCTGAAAGAGGAAATGATTGTGAAAGGTTTTGTTCCAGACCCTACTATTTATCATTATCTGATGGTGGGCTGTGTGAAAAGCTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAGGAGAAATTAGGAGGGGCTGTGGAAGATGGAGTTGTTTATGGAAGCTTGATGAAAGGGTACTTTATGAAAGGAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTTGGTGTCAATTCAGTGGTGAAGATGAGCGCTATTGCATACAATTCTGTGCTTGATGCATTATGCAAGAATGGAAAGTTTGGTGAGGCTTTGATGTTGTTTGATAGGATGATTAAGGAGCATTGTCCGCCTAGACGTTTGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCACAGAAGGAAGATTCAAAGATGCCATTGAAATATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAAGCACTTTATGGAACAATGGGTGATAAGGGTGTGAACCCTGACGAGTTTACTTATAGCTTGTTGATGGATTCTTGCTTTAAAGAGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTGGAGTCCGGACTTAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGAGAAGATTAACGAGGCAAAGTCTTTCTTTGACTTGATGGTGAAGAAGCTCAAGATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTGAGTGAATCCGGGAAACTGGATGAAATACTAAATGTGGTCGATACTCTTCTGGATGATGATGGGATTGAATTTACTGAGGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGATAGGGAAGGGGATTTAGCTAAACTTATAGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAAGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTTTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCACAAGGCACTGGTGATGCAGATCAGGCTACTGCAGGGAACGAAATGCAATCTGGTCAAGAAGATAGTGGTAAAACAGAACTTGCGGAATCTAATCCTTGAAGGGGCATAGTAGAGGAAAAAAGTATCGACAAGTGAGAATTGAACTGTTTCAGATATTAAAGAGGATGCAACTTACCAGAACTTCCACTTCTAAAGGGAAACGTCCATGAAACTAATTCGATGCACAATCATTCATGTGCGTAAAACCCGATGATGGAGTTTCTTCTGTAGGATGGCGAAAGCAAGGATCCACACAAATCTTCTAACTTAGTGAATGTTTTTTATTTTTATTTTTTACATGTAAGAGTGGGGGATTGAAACTGTGACCTCTTGATCGAGGGGCTTTATGTCAATTGAATCATGTTTTTGTTGGCCTAAGTTCATGAATGTTATTACAACTTTAGCAAACATCTTTCATTGGAAGATCAAGAATTATCAATATCATTGGTATTTTACAATTAAAAAATCACCCGTTACAATATATGAGGAAAGGTAAAGAATAGGTACAAAGCAAAGCAGTGTCTAAAACACACAAAACGGCAGGCCTTGAGTAACACTTCACTTTTAGCTACAAAGGTTCGGTATGCAGACCCCAGCATCTGGGTTTTGTTCCTTCCATATCCTTCCTGTAACTCTCAGCTTCAGTTCCTTTCTATCCCCACCAGAGAAGAAAAGAGCCATATTTCTCTGAATGATCAATCCATCGTGGCTGTCCCTGACTTTTCGATGACTATCTCTAATACTTCGTGGTGTACCCTCCCATATCAGTTTCCGCCCATATCCACCAACCTCGAGACTGTAGCTGTAGGTTCGAGCCTCATTCTCATCACCCATGAATCGAAGGAAAGCCATGTAGACTGGGGCCATGCCAAGCTGAAAGGCTTCAAAGTGAAGGCAGAAGTATTGACCGAAACAATGAAAAACCTGCAAAATGTGAGAAGAGCAAGCCACAAGAAACGGGATCAATCTAAAATATGGATTTAACCCTGAGGAATGTCCAGCAGAATGAGTCTCCTTCTGGCGCGAAGGCCTTATTTGATCAAACACATAACAAGCCATATATGGCATTTATGGGTAGTTTTGGCATCCCGTGACCTTATTAGCTTTCGTTTGTACAGATTTGAGAGAAACACTTGAACCGCAAAAGCATAAATCCATCACTTGGGGTAAAAGGAAACTGAAAAAAATTATATAAAAACATGTACAATCCTTTGATAATTCAATCATCAAACACAGTGAAGGTCAAAGTTCCATAAAATAAAATAAAATGATCCATTACCAAATTTCTAATCAACTTGCAGCTTTGATGGGCTATAAAACTTGCAGCACGTTATGTAATAACGGACTTTTCATCATCTTTCTTTTGTTTTCAACTAGTTGTTGACTTCTTCTAATCTCCCAGAATTTCATAGTTTGGTTTGAAACCCTTGTCCTCCCCATACCTTAATAGATATCGAGCGACACCACAGATACATACATACATATTTACATAAACATACAGACGTGTGCATACAAATCTATCACAGGTAAGGATCGATTCACGTAGATAAACTAAGTTCTACCAAAGAAAGAGAAAATGAGAAT

Coding sequence (CDS)

ATGGCTTTATCGAAGCCGACATTCTTTACGCACCTCAAAACCCTAACCGGATCCCACCATTTACTCCGGCACCAAGCTCCGGCTCCTCCCGTCGTCACCCTCCGTTTTCTCTCTTTTGCTTCACCGGAGGAAGCTGCCGCCGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCCCCACTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAGCCTCAAACCCCTCAAAACCCTAATGCTCCCAAACTCCCTGAGCATATCTCTGCCCTCTCTGGTAATCGGCTTAACCTCCACAACCGTATTCTCACTCTCATTCGAGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGCCCTACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCGAAGTATTCCGATTTGCTTTCACTTCACCGGTTTATTACGCAGGCTGGTGTCGCCCCTAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACTGCAATGGAACACTACAAGCAATTGATCAATGACGCGCCTTTTAATCCGTCGCCGACGACTTACAGGATCTTGGTTAAAGGGCTGGTAGATAATAACAAGTTGGAAAGGGCAATGGAGCTGAAAGAGGAAATGATTGTGAAAGGTTTTGTTCCAGACCCTACTATTTATCATTATCTGATGGTGGGCTGTGTGAAAAGCTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAGGAGAAATTAGGAGGGGCTGTGGAAGATGGAGTTGTTTATGGAAGCTTGATGAAAGGGTACTTTATGAAAGGAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTTGGTGTCAATTCAGTGGTGAAGATGAGCGCTATTGCATACAATTCTGTGCTTGATGCATTATGCAAGAATGGAAAGTTTGGTGAGGCTTTGATGTTGTTTGATAGGATGATTAAGGAGCATTGTCCGCCTAGACGTTTGGCAGTGAACTTGGGAAGCTTTAATGTGATGGTTGATGGGTACTGCACAGAAGGAAGATTCAAAGATGCCATTGAAATATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAAGCACTTTATGGAACAATGGGTGATAAGGGTGTGAACCCTGACGAGTTTACTTATAGCTTGTTGATGGATTCTTGCTTTAAAGAGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTGGAGTCCGGACTTAGACCCAATATAGCAGTTTATAATAGATTAGTGGATGAGTTGGTTAAATTAGAGAAGATTAACGAGGCAAAGTCTTTCTTTGACTTGATGGTGAAGAAGCTCAAGATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTGAGTGAATCCGGGAAACTGGATGAAATACTAAATGTGGTCGATACTCTTCTGGATGATGATGGGATTGAATTTACTGAGGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGATAGGGAAGGGGATTTAGCTAAACTTATAGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAAGAGGCTGAGGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTCTCTTCTTTACTGTCATCCAAGTTGTTCGGGAACAAGGAAGGTGAGAAAGAATCTGCACAAGGCACTGGTGATGCAGATCAGGCTACTGCAGGGAACGAAATGCAATCTGGTCAAGAAGATAGTGGTAAAACAGAACTTGCGGAATCTAATCCTTGA

Protein sequence

MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKSFFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAQGTGDADQATAGNEMQSGQEDSGKTELAESNP
Homology
[Close]
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match: Q9M3A8 (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 3.7e-218
Identity = 398/629 (63.28%), Postives = 493/629 (78.38%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           M++SK  F  HL+TL+ S+   RH+    P + +R++SFA+ EEAAAERRRRKRRLR+EP
Sbjct: 1   MSISKAAFLNHLQTLSRSY---RHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEP 60

Query: 61  PLSS-SSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           P++S + + + QSQ P+P   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAA
Sbjct: 61  PVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           L+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNIIT+NLIFQ Y
Sbjct: 121 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPD 240
           LD RKP+ A+EHYK  I++AP NPS  T+RILVKGLV N+ LE+AME+KE+M VKGFV D
Sbjct: 181 LDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVD 240

Query: 241 PTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRC 300
           P +Y YLM+GCVK+SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMK ME+EAM C
Sbjct: 241 PVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMEC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNV 360
           YEE VG NS V+MSA+AYN VL+AL +NGKF EAL LFD + KEH PPR LAVNLG+FNV
Sbjct: 301 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 360

Query: 361 MVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKG 420
           MV+GYC  G+F++A+E+F +MGD++CSPDTLSFNNL+ QLC+N +LAEAE LYG M +K 
Sbjct: 361 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 420

Query: 421 VNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAK 480
           V PDE+TY LLMD+CFKE + D+ A Y++ MVES LRPN+AVYNRL D+L+K  K+++AK
Sbjct: 421 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGEL 540
           SFFD+MV KLKMD  +Y+FIM+ALSE+G+LDE+L +VD +LDDD +  +EELQEFV+ EL
Sbjct: 481 SFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 540

Query: 541 RKEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGE--- 600
           RK  REGDL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K    K+     
Sbjct: 541 RKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKL 600

Query: 601 --KESAQGTGDADQATAGNEMQSGQEDSG 624
             +  A G  +AD      EM  G E  G
Sbjct: 601 LWENEAGGVEEADVV----EMAKGVEAGG 620

[Close]
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match: Q9SY69 (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.1e-84
Identity = 196/541 (36.23%), Postives = 298/541 (55.08%), Query Frame = 0 

Query: 24  HQAPAP-PVVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQTPQN 83
           H  P P P +  R ++F+S EEAAAERRRRKRRLRIEPPL +     P + PPK    ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RD 133

Query: 84  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 143
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 144 AQLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 203
           A  R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 204 NPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFK 263
            PS  TYR L KGLV   ++  A  L  EM+ KG   D T+Y+ L+ G +   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 264 LFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVL 323
            F+ELK K    V DG+V  + M+ +F KG ++EAM  Y     ++   +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 324 DALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMG 383
           +   K GK  EA  LF+ M+  H PP  L+VN  +  +MV+     G F +AI  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 384 DYRCSP----DTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKE 443
               S     D L + N++ + C  GML EAE  +     + +  D  ++  ++D+  K 
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 444 NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSY 503
            R DDA     +MV+  LR       R+  EL+K  K+ E+      M  ++ K D S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 504 QFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKLIEEKE 558
             +++ L +   LD+  ++V  ++  + +  T  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.6e-43
Identity = 105/412 (25.49%), Postives = 199/412 (48.30%), Query Frame = 0 

Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLE 222
           +G  P++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGS 282
           +AME+ + M+ +   PD   Y  L+    + S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIK 342
           L+ G   +G  +EA++   +    +S  + + I +N +L ++C  G++ +A  L   M++
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 EHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNN 402
           +   P     ++ +FN++++  C +G    AI+I EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 403 GMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVY 462
             +  A      M  +G  PD  TY+ ++ +  K+ + +DA     ++   G  P +  Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 463 NRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSYQFIMKALSESGKLDEIL 514
           N ++D L K  K  +A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 6.6e-42
Identity = 122/454 (26.87%), Postives = 212/454 (46.70%), Query Frame = 0 

Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELK 228
            +T+  + +      +   AME  +++  +         Y I++ GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMIVKGFVPDPTIYHYLMVG-CVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGY 288
            EM +KGF  D  IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 289 FMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPP 348
             +G   EA   ++E   +   +    + Y S++D  CK  +  +A  + D M+ + C P
Sbjct: 332 VKEGKLREAEELHKEM--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVD 468
           A+ L+  M  + V PD  +Y +L+D       P+ A   F K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLEKINEAKSFF-DLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIE 528
            +    K+++A   F  L +K +K D  +Y  ++  L + G L E  +++   +++DG  
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDGHS 571

Query: 529 FTEELQEFVRGELRKEDREGDL---AKLIEEKER 558
                   +   +R    EGD    AKLIEE +R
Sbjct: 572 PNGCTYNIL---IRAHLGEGDATKSAKLIEEIKR 590

[Close]
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-41
Identity = 110/419 (26.25%), Postives = 200/419 (47.73%), Query Frame = 0 

Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILV 212
           +L+L + +   G+A N+ T +++   +  CRK   A     ++I    + P+  T+  L+
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGG 272
            GL    ++  A+EL + M+  G  PD    + L+ G   S        L +++ E   G
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 273 AVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGE 332
              + V YG ++      G    AM    +    N  +K+ A+ Y+ ++D LCK+G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 333 ALMLFDRMIKEHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSF 392
           A  LF+ M       + +  N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++F
Sbjct: 287 AFNLFNEM-----EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 393 NNLIEQLCNNGMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVE 452
           + LI+     G L EAE L+  M  +G+ PD  TY+ L+D   KEN  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 453 SGLRPNIAVYNRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSYQFIMKALSESGKLD 511
            G  PNI  +N L++   K  +I++    F  M ++ +  D  +Y  +++   E GKL+
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

[Close]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match: A0A6J1JB23 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482852 PE=4 SV=1)

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 601/632 (95.09%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHL+TLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQP KPQ+PQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM +KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IY YLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLA+AE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESG+LDE+LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match: A0A6J1E509 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430665 PE=4 SV=1)

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 599/632 (94.78%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHLKTLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQ+ QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM  KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRADDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESG+LDE+LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match: A0A6J1CK90 (pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=3673 GN=LOC111011752 PE=4 SV=1)

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 583/631 (92.39%), Postives = 602/631 (95.40%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MA+SKPTFFTHLK LTGSH LLR+QAPAP  VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MAVSKPTFFTHLKALTGSHRLLRYQAPAPLSVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQ+PQNPNAPKLPEHISALSGNRL LHNRILTLIR+NDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLTLHNRILTLIRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFN SPTTYRIL+KGLVDNNKLERAMELKEEM VKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNASPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV++SD DGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMKGMEEEAMRCY
Sbjct: 241 IIYHYLMVGCVRNSDHDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EE VGVNSVVKMSAIAYNSVLDALCK+GKFGEALMLFDRMIKEH PPR LAVNLGSFNVM
Sbjct: 301 EENVGVNSVVKMSAIAYNSVLDALCKHGKFGEALMLFDRMIKEHSPPRHLAVNLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYCTEGRF+DAIEIF+KMGDYRCS DTLSFNNLIEQLC NGML EAE LY TMGDKGV
Sbjct: 361 VDGYCTEGRFQDAIEIFKKMGDYRCSTDTLSFNNLIEQLCKNGMLTEAEELYATMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           +PDEFTY LLMDSCFKENR DDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KI+EAKS
Sbjct: 421 SPDEFTYGLLMDSCFKENRSDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKIDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESGKLDE+LNVVDTLLDDDGIEFTEELQEFVRG+LR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEVLNVVDTLLDDDGIEFTEELQEFVRGQLR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDLAKL+EEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLAKLMEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESN 632
           +G+GDA QA A N+ Q GQE SG TEL ESN
Sbjct: 601 EGSGDAAQAAAVNDTQPGQEASGNTELEESN 631

[Close]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match: A0A6J1G012 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111449469 PE=4 SV=1)

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 559/632 (88.45%), Postives = 591/632 (93.51%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKP+F THLKTLTGSHHLLRH APAPPVV LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFLTHLKTLTGSHHLLRHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQ+PQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSL RFITQAGVAPNIITHNLIFQ YL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLDRFITQAGVAPNIITHNLIFQMYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM VKGFV DP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVSDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGC+K+SDPDGVFKLFEELKEKLGGAVEDGVVYGSL+KGYF++GMEEEAM+ Y
Sbjct: 241 IIYHYLMVGCLKNSDPDGVFKLFEELKEKLGGAVEDGVVYGSLIKGYFIRGMEEEAMKFY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           E+TVG NS VKMSAIAYNSVLDALCKNGKF EAL+LFDRMIKEH PPRRL +NLGSFNV+
Sbjct: 301 EQTVGDNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYCTEGRF+DA+EIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYG+MGDKGV
Sbjct: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           +PDEFTY LLMD CFK NRPDDAAGYFRK+VESGLRPNI VYNRLVDELVKL KI EA S
Sbjct: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKIVESGLRPNIVVYNRLVDELVKLGKIEEANS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+FI+KALSESGK+DEILNVV+TLLDDDGIEFTEELQEFVRGELR
Sbjct: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDLAK++EEKER+KAEAK     AAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLAKVMEEKERVKAEAK-----AAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
           +           NEMQSGQED+GKT L ESNP
Sbjct: 601 E-----------NEMQSGQEDTGKTALPESNP 616

[Close]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match: A0A0A0L7B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1)

HSP 1 Score: 1070.1 bits (2766), Expect = 3.5e-309
Identity = 560/635 (88.19%), Postives = 585/635 (92.13%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAP-PVVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKP FFTHLKTLTGSHHLL+ QA AP P+VTLRFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSA RP +QPP+ QTPQNPNAPK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELK+EMI KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRC 300
           P IYHYLM GCV+S DPDGVFKLFEELKEKLG  VEDGVVYG+LMKGYFMK MEEEAM+C
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNV 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRM KEH PPR LAVNLGSFNV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360

Query: 361 MVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKG 420
           MVDGYC EGRFK+AIE+FEKMGDYRC PDTLSFNNLIEQLCNNGMLAEAE LYGTM DKG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420

Query: 421 VNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAK 480
           VNPDEFTY LLMDSCFK+NR DDAA YFRKMV+SGLRPNIAVYN LVDELVKL KI++AK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGEL 540
           SFFDLMVKKLKMDASSYQFIMKALSESGK+DEILNVVDTLLDDDGIEF+EELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKE+RE DLAKL+EEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AQGTGDADQATAGNEMQS--GQEDSGKTELAESNP 633
                        NEMQS   ++DSGKTELAES+P
Sbjct: 601 VV-----------NEMQSVEQEDDSGKTELAESSP 624

[Close]
BLAST of Lcy11g000620 vs. NCBI nr
Match: XP_023553006.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 587/632 (92.88%), Postives = 602/632 (95.25%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHLKTLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQ+PQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM +KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQF+MKALSESG+LDE+LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFMMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. NCBI nr
Match: KAG6576653.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 600/632 (94.94%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHLKTLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQ+ QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM  KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESG+LD++LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDKMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. NCBI nr
Match: XP_022922766.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita moschata] >KAG7014704.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 599/632 (94.78%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHLKTLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQ+ QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM  KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVG NSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NR DDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRADDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESG+LDE+LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. NCBI nr
Match: XP_022984619.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 601/632 (95.09%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MALSKPTFFTHL+TLT S HLL HQAPAPP+VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQP KPQ+PQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSPTTYRIL+KGLVDNNKLERAMELKEEM +KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IY YLMVGCV+SSDPDGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMK MEEEAMRCY
Sbjct: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRM KEH PPRRLAV+LGSFNVM
Sbjct: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYC EGRFKDAIE+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLA+AE LYGTMGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           NPDEFTY LLMDSCFK NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KINEAK+
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESG+LDE+LNVVDTLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESNP 633
                       NEMQSGQEDSGKTELAESNP
Sbjct: 601 V-----------NEMQSGQEDSGKTELAESNP 620

[Close]
BLAST of Lcy11g000620 vs. NCBI nr
Match: XP_022141333.1 (pentatricopeptide repeat-containing protein At3g49240 [Momordica charantia])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 583/631 (92.39%), Postives = 602/631 (95.40%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           MA+SKPTFFTHLK LTGSH LLR+QAPAP  VTLRFLSFASPEEAAAERRRRKRRLRIEP
Sbjct: 1   MAVSKPTFFTHLKALTGSHRLLRYQAPAPLSVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQ+PQNPNAPKLPEHISALSGNRL LHNRILTLIR+NDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLTLHNRILTLIRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFN SPTTYRIL+KGLVDNNKLERAMELKEEM VKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNASPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 TIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCY 300
            IYHYLMVGCV++SD DGVFKLFEELKEKLGG VEDGVVYGSLMKGYFMKGMEEEAMRCY
Sbjct: 241 IIYHYLMVGCVRNSDHDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVM 360
           EE VGVNSVVKMSAIAYNSVLDALCK+GKFGEALMLFDRMIKEH PPR LAVNLGSFNVM
Sbjct: 301 EENVGVNSVVKMSAIAYNSVLDALCKHGKFGEALMLFDRMIKEHSPPRHLAVNLGSFNVM 360

Query: 361 VDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGV 420
           VDGYCTEGRF+DAIEIF+KMGDYRCS DTLSFNNLIEQLC NGML EAE LY TMGDKGV
Sbjct: 361 VDGYCTEGRFQDAIEIFKKMGDYRCSTDTLSFNNLIEQLCKNGMLTEAEELYATMGDKGV 420

Query: 421 NPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKS 480
           +PDEFTY LLMDSCFKENR DDAAGYFRKMVESGLRPNIAVYNRLVDELVKL KI+EAKS
Sbjct: 421 SPDEFTYGLLMDSCFKENRSDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKIDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELR 540
           FFDLMVKKLKMDASSYQFIMKALSESGKLDE+LNVVDTLLDDDGIEFTEELQEFVRG+LR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEVLNVVDTLLDDDGIEFTEELQEFVRGQLR 540

Query: 541 KEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDLAKL+EEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLAKLMEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 QGTGDADQATAGNEMQSGQEDSGKTELAESN 632
           +G+GDA QA A N+ Q GQE SG TEL ESN
Sbjct: 601 EGSGDAAQAAAVNDTQPGQEASGNTELEESN 631

[Close]
BLAST of Lcy11g000620 vs. TAIR 10
Match: AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 759.2 bits (1959), Expect = 2.6e-219
Identity = 398/629 (63.28%), Postives = 493/629 (78.38%), Query Frame = 0 

Query: 1   MALSKPTFFTHLKTLTGSHHLLRHQAPAPPVVTLRFLSFASPEEAAAERRRRKRRLRIEP 60
           M++SK  F  HL+TL+ S+   RH+    P + +R++SFA+ EEAAAERRRRKRRLR+EP
Sbjct: 1   MSISKAAFLNHLQTLSRSY---RHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEP 60

Query: 61  PLSS-SSATRPQSQPPKPQTPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           P++S + + + QSQ P+P   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAA
Sbjct: 61  PVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           L+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNIIT+NLIFQ Y
Sbjct: 121 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPD 240
           LD RKP+ A+EHYK  I++AP NPS  T+RILVKGLV N+ LE+AME+KE+M VKGFV D
Sbjct: 181 LDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVD 240

Query: 241 PTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRC 300
           P +Y YLM+GCVK+SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMK ME+EAM C
Sbjct: 241 PVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMEC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNV 360
           YEE VG NS V+MSA+AYN VL+AL +NGKF EAL LFD + KEH PPR LAVNLG+FNV
Sbjct: 301 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 360

Query: 361 MVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEALYGTMGDKG 420
           MV+GYC  G+F++A+E+F +MGD++CSPDTLSFNNL+ QLC+N +LAEAE LYG M +K 
Sbjct: 361 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 420

Query: 421 VNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAK 480
           V PDE+TY LLMD+CFKE + D+ A Y++ MVES LRPN+AVYNRL D+L+K  K+++AK
Sbjct: 421 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGEL 540
           SFFD+MV KLKMD  +Y+FIM+ALSE+G+LDE+L +VD +LDDD +  +EELQEFV+ EL
Sbjct: 481 SFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 540

Query: 541 RKEDREGDLAKLIEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGE--- 600
           RK  REGDL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K    K+     
Sbjct: 541 RKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKL 600

Query: 601 --KESAQGTGDADQATAGNEMQSGQEDSG 624
             +  A G  +AD      EM  G E  G
Sbjct: 601 LWENEAGGVEEADVV----EMAKGVEAGG 620

[Close]
BLAST of Lcy11g000620 vs. TAIR 10
Match: AT1G10270.1 (glutamine-rich protein 23 )

HSP 1 Score: 312.8 bits (800), Expect = 6.4e-85
Identity = 196/541 (36.23%), Postives = 298/541 (55.08%), Query Frame = 0 

Query: 24  HQAPAP-PVVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQTPQN 83
           H  P P P +  R ++F+S EEAAAERRRRKRRLRIEPPL +     P + PPK    ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RD 133

Query: 84  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 143
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 144 AQLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 203
           A  R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 204 NPSPTTYRILVKGLVDNNKLERAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFK 263
            PS  TYR L KGLV   ++  A  L  EM+ KG   D T+Y+ L+ G +   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 264 LFEELKEKLGGAVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVL 323
            F+ELK K    V DG+V  + M+ +F KG ++EAM  Y     ++   +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 324 DALCKNGKFGEALMLFDRMIKEHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMG 383
           +   K GK  EA  LF+ M+  H PP  L+VN  +  +MV+     G F +AI  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 384 DYRCSP----DTLSFNNLIEQLCNNGMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKE 443
               S     D L + N++ + C  GML EAE  +     + +  D  ++  ++D+  K 
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 444 NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSY 503
            R DDA     +MV+  LR       R+  EL+K  K+ E+      M  ++ K D S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 504 QFIMKALSESGKLDEILNVVDTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKLIEEKE 558
             +++ L +   LD+  ++V  ++  + +  T  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]
BLAST of Lcy11g000620 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 3.2e-44
Identity = 105/412 (25.49%), Postives = 199/412 (48.30%), Query Frame = 0 

Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLE 222
           +G  P++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGS 282
           +AME+ + M+ +   PD   Y  L+    + S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIK 342
           L+ G   +G  +EA++   +    +S  + + I +N +L ++C  G++ +A  L   M++
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 EHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNN 402
           +   P     ++ +FN++++  C +G    AI+I EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 403 GMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVY 462
             +  A      M  +G  PD  TY+ ++ +  K+ + +DA     ++   G  P +  Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 463 NRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSYQFIMKALSESGKLDEIL 514
           N ++D L K  K  +A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]
BLAST of Lcy11g000620 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 4.7e-43
Identity = 122/454 (26.87%), Postives = 212/454 (46.70%), Query Frame = 0 

Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILVKGLVDNNKLERAMELK 228
            +T+  + +      +   AME  +++  +         Y I++ GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMIVKGFVPDPTIYHYLMVG-CVKSSDPDGVFKLFEELKEKLGGAVEDGVVYGSLMKGY 288
            EM +KGF  D  IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 289 FMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMIKEHCPP 348
             +G   EA   ++E   +   +    + Y S++D  CK  +  +A  + D M+ + C P
Sbjct: 332 VKEGKLREAEELHKEM--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVESGLRPNIAVYNRLVD 468
           A+ L+  M  + V PD  +Y +L+D       P+ A   F K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLEKINEAKSFF-DLMVKKLKMDASSYQFIMKALSESGKLDEILNVVDTLLDDDGIE 528
            +    K+++A   F  L +K +K D  +Y  ++  L + G L E  +++   +++DG  
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDGHS 571

Query: 529 FTEELQEFVRGELRKEDREGDL---AKLIEEKER 558
                   +   +R    EGD    AKLIEE +R
Sbjct: 572 PNGCTYNIL---IRAHLGEGDATKSAKLIEEIKR 590

[Close]
BLAST of Lcy11g000620 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-42
Identity = 110/419 (26.25%), Postives = 200/419 (47.73%), Query Frame = 0 

Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILV 212
           +L+L + +   G+A N+ T +++   +  CRK   A     ++I    + P+  T+  L+
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMIVKGFVPDPTIYHYLMVGCVKSSDPDGVFKLFEELKEKLGG 272
            GL    ++  A+EL + M+  G  PD    + L+ G   S        L +++ E   G
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 273 AVEDGVVYGSLMKGYFMKGMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGE 332
              + V YG ++      G    AM    +    N  +K+ A+ Y+ ++D LCK+G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 333 ALMLFDRMIKEHCPPRRLAVNLGSFNVMVDGYCTEGRFKDAIEIFEKMGDYRCSPDTLSF 392
           A  LF+ M       + +  N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++F
Sbjct: 287 AFNLFNEM-----EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 393 NNLIEQLCNNGMLAEAEALYGTMGDKGVNPDEFTYSLLMDSCFKENRPDDAAGYFRKMVE 452
           + LI+     G L EAE L+  M  +G+ PD  TY+ L+D   KEN  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 453 SGLRPNIAVYNRLVDELVKLEKINEAKSFFDLM-VKKLKMDASSYQFIMKALSESGKLD 511
            G  PNI  +N L++   K  +I++    F  M ++ +  D  +Y  +++   E GKL+
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

The following BLAST results are available for this feature:
BLAST of Lcy11g000620 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3A83.7e-21863.28Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop... [more]
Q9SY699.1e-8436.23Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX... [more]
Q3EDF84.6e-4325.49Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9ASZ86.6e-4226.87Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
Q0WKV32.5e-4126.25Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
BLAST of Lcy11g000620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JB230.0e+0092.72pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit... [more]
A0A6J1E5090.0e+0092.72pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit... [more]
A0A6J1CK900.0e+0092.39pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=... [more]
A0A6J1G0120.0e+0088.45pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like OS=Cuc... [more]
A0A0A0L7B23.5e-30988.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1[more]
BLAST of Lcy11g000620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553006.10.0e+0092.88pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur... [more]
KAG6576653.10.0e+0092.72Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022922766.10.0e+0092.72pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ... [more]
XP_022984619.10.0e+0092.72pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ... [more]
XP_022141333.10.0e+0092.39pentatricopeptide repeat-containing protein At3g49240 [Momordica charantia][more]
BLAST of Lcy11g000620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49240.12.6e-21963.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G10270.16.4e-8536.23glutamine-rich protein 23 [more]
AT1G09900.13.2e-4425.49Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G12620.14.7e-4326.87Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.11.8e-4226.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 541..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 590..632
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 1..603
NoneNo IPR availablePANTHERPTHR47933:SF12PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..603
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 274..351
e-value: 5.2E-14
score: 54.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 99..273
e-value: 9.7E-28
score: 99.4
coord: 417..619
e-value: 4.6E-24
score: 87.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 352..416
e-value: 3.2E-16
score: 61.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 173..488
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 353..380
e-value: 4.4E-7
score: 29.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 316..347
e-value: 8.8E-10
score: 36.2
coord: 425..459
e-value: 2.8E-8
score: 31.5
coord: 356..389
e-value: 1.3E-8
score: 32.5
coord: 207..239
e-value: 2.6E-6
score: 25.2
coord: 391..424
e-value: 6.0E-5
score: 21.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 129..179
e-value: 0.0024
score: 17.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 207..236
e-value: 0.0018
score: 18.4
coord: 461..488
e-value: 0.084
score: 13.2
coord: 242..269
e-value: 0.052
score: 13.8
coord: 278..302
e-value: 0.0077
score: 16.4
coord: 316..345
e-value: 1.5E-8
score: 34.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 387..436
e-value: 2.1E-12
score: 47.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..387
score: 12.309597
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 11.268274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 13.065928
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 11.027125
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 12.430172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g000620.1Lcy11g000620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009960 endosperm development
biological_process GO:0006349 regulation of gene expression by genetic imprinting
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding