Lcy11g000570 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGAAGCTCTTGTGAGATCTTTCTTTATACAAAAATCATTCAACCCCTCAATAAAGGCATCATATTTTGTGGGTAATTTATTTCACCAAACCCAAGGAGGAAAGGGGAAGGACACTGACGACATTATTTCAAAAATCCTCAAAAGGGAAATGATGAGATGAGATCAGTGGAATTTCACTAATTTGAAATGCGATTTTCAATTCTATTTTGTGTTGGATTTGAGACCAGACCCCAGATTCAGGGGTGGCGCCACAAACCTACATTGCTTTCTCTGAAACTTTCATCAGGTTTCTCTCTCTTTCTCTATCTCTCTCTCTTTCATTGAACAAAATGATTTGGGTCTGAAATTGTTCTGTTGATAGGGAGAGTTTCTAGATTTGCAACATTAGAACTGGAAGAACTGAAAGAAAGCAAATAAGGGAAGAGTTTTGTTTTTGGGTTTCTTGCAGCTGCAACTTCTTCTTCAGCTCTGATTTTTTGAATGGCTTGAGTGAACAAAAATGGGATTTTTGCTGAAAATGTGAAGAAGAAGAAGAAGAAGAAACAGAACTGAAGTTTGCCTCTTTCTCTTATTTCCACCCTTTTCTGTTCTGATGAAACTGGATCAGATTGACAAGTCTAAAGTACCAAAAGATGAAATGCAAGATGGAGGGCTCTCTCATGAAGATTCAATCAGCCCTCGTTCTAAGGTCCCATAAGGTCCCATATGTTCATTAGATTCTAAGTTTGATGACAAATCTTGCAAAGTTTTAGTGTTCATTTGGTTCATGCAGAAACTTCAAGATGACCTGCAAACTCTAGGGATGAAAATCCAGCTGCATGAGGACAACATAAGGTTTCTAAAGACTCTGAAAGACAAATTAGTCGATTCCATCGTTGATCTGCAAGGTATTCTCATCTTCCTTCCTGAACAAAGATTCATACTTTCTTAGATATCTAAGACAATGATGTCTTTTCCAACACTTACATAAGTTTTCATTACAGTAATCCTAGGAAAGTACCATGCTTCGAGCACGCCTAAGATTGAGAACAAGGATGGTTCTGATACTCAAAGTGAAGACAAGCCATCAGATCAGATACTACAGCAGGAAAACACTGCTGCTAGCATCTTGTGCCAGCTGAAAACCAATCCAAAGATGTTGGCTTCTGATCCTACACTGACTGATGATGTGCTTGGTGTTGTTGCTGAACTTGGAAAAGTTGATGACAGTAGCCTTAGCAGGTCTCTTTTACTTCTAATTACATTTGTTTCTCATTTTTTCAAGTAAACTCATATTGTCTCATGGTAATTTGCACTGATATGAATAATTTTCATTTGAAAGTGATGTTAATGGGCAGTGGCTTGAGCCATGGGGATGGGATTATCTAGGGTGCTTTTGATGGTTGAGCCAAATATGAGAACACTAGCTAATTCATTTTAGGTTAGGTTACCATTTTAGTCTACATGGTCTTCATTTGAAAGGTATTAAAAGTGTACATTTGTCCACATAGTGTGGTTAAATCTCTCAAAACATCCCTGACAATGTCGACATTATTGTAAATTAATAACGTTCTTATGTGGCACGTGTTTTGGACATGGTAGTAAGATGATGAGCTGAGTCAAATTTGACTGTCACTTTATTACTAACATTTTGCCACAGTCTTTTCGCAACTTCCTATTCGAATTTGAGCTTAAAGCAAAGTTGTTTGATAGCATAAGATTTTAGTTTGTTCTTGGCAATAAATTAGCAGATTTGGACAATTTGGAGATGGCTATTGGGTTTTATTCATTTTAGTGATATTTAGGAAACAAACTCAAATTTGAAGTAATTAACGAAGAACGTGACCGTTTTATACTTTCATCTACATGTTTTTCTTTATCCTCTCCTTTTCTGTTTCTGGTTTGGAATACAGCCTTTTATCGGAGTACCTAGGAACAGAGACAATGCTGGCTATTGTCTGCAAGACATACAATGGAGTAAAATCTTTGGAGAAGTATGACAAGGAAGGAAGCATAAATAAAACATCCGGGCTTCACGGATTCAGCACTTCACTTGGGAAAACTTTAGAGGGTCGATTCAATGTCATATCTCTCGAAACATTGAGGTATTCGTTTCTGATATGGCGTGGTTGTTTGGAAATTCCTGATTTTAGCACAAAAATATTCTTTTACTGAGAACTCAACACGCTCTTTGGTTCTTTATGCCTGCAGACCATATGCTGGTGAATTTTTGGCCGATGATCTGCAAAGAAGGCTGGATATTCCGAAGCCAAGACTGCCTAATGGGGACTGTCCAACCGGTTTTCTTGGTTATGCTGTCAATATGATAAACATAGACAGAACACACTTGTTTTTTCTCACAGCAAGCGGCTATGGTCTCAGAGAGACTTTGTTTTATTCTCTATTTTCTTGTCTGCAAGTCTATAAAACAAGGGCTGAAATGCTACAAGCCTTTCCTTGTATTACCGATGGAGCGCTTTCTTTGGATGGTGGGATTATTAAGCGGAGTGGACTGTTTTGTCTTGGAAACAGGTACGACGCTCTTCATCGCAACTTGAATGATTTCTCTATTATGGATTTGAATCTCTACCATGGTCATTGGTCCCAACTCTTGAGGCTTCTCTGTTTATGAATATTTACTTTTACGTGTTCTGCGGTGTTAGGGACGAAGTGAAGGTGAGCTTTTCAAAGACCTCAACAGATTCAAGCCTACCTGACCATTACACCGAATCTGAGAGGCAGATGAAAGAAATGAAATGGAAAAAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAAGCACTGCTAGATAGCACGAAGCTCAATTTCGAAAGAAAGAAGGTGGAGTTTGTCCAGTTCCTTGCTGAAACAGCCGCTCGGGTAAGCTCCAAACCAACCCCACAAATATACTGTACTATGGCAAATGGCTTTGCATTTGACTTCAATTTGCAACAACCTAGCTTCTGTCTTTTTATTTTATTTGTACATTTTCTTGTTTCCTTGCACTGGAATTTTGTTCAATGTCGCCGTCATTGAACTTGAACGAGTTACTCGGTTAACTGTCCTATTCAAACTGTTACAAACTGTCTTTCCCTTGAATGATCTGATATCCTTAAATAGATATAAACCACACAATGTGCTATTGGCTCTTCTAAAATTTGAAGTGCATCAAATGAACTTTTATGAGTATTTTACAATGCCATTTTGCTTGCTGCCAATGCCTTTGTAAGTCCAATGTGGCTACTATATGAACATGCTGTCATATATTGATCATTAAATCAAGTCATTTCTTATATAATGGCAGCAACAAACTCCAGTAGCAACTGGGAGAAAGGGCGGTAGGTGATGCCGAGCAAAGAAGGATCGGCCAACCATCGAAGGGATGACTGAATGTTTTGGAAGTTTCGGGTCGATCGATGCTTTGGTTTATTGTAAAATATGCATCCGGGCTGGAAAGGTGATGCCTTTTTCAGGGTGAAGGAAGGAAATGGGAGTATTTTTGTAGTGCCAATTTTGTGATGTGAAATAGATTGTGGTTCTGCAAAGACCAAGTCTATATGAAGCTTCCTTTGACAGTTCTATGATGGTGCTTTCTTTCACCCCTTCATATCTTCCCACTATGCCTCAAAAATTTAGGGTTCTTAATCACTCTTCCAAGGCAATTGGTTTTCAAATTTATGAAATCCCTACAATTTTTTTTTTTGAAAATTATGAAATCCCTACAATTATACTTCTTTTTAGATGGTAATCGATGTCTCGTCCACTCAGTTATGG CTCGAAGCTCTTGTGAGATCTTTCTTTATACAAAAATCATTCAACCCCTCAATAAAGGCATCATATTTTGTGGGTAATTTATTTCACCAAACCCAAGGAGGAAAGGGGAAGGACACTGACGACATTATTTCAAAAATCCTCAAAAGGGAAATGATGAGATGAGATCAGTGGAATTTCACTAATTTGAAATGCGATTTTCAATTCTATTTTGTGTTGGATTTGAGACCAGACCCCAGATTCAGGGGTGGCGCCACAAACCTACATTGCTTTCTCTGAAACTTTCATCAGGGAGAGTTTCTAGATTTGCAACATTAGAACTGGAAGAACTGAAAGAAAGCAAATAAGGGAAGAGTTTTGTTTTTGGGTTTCTTGCAGCTGCAACTTCTTCTTCAGCTCTGATTTTTTGAATGGCTTGAGTGAACAAAAATGGGATTTTTGCTGAAAATGTGAAGAAGAAGAAGAAGAAGAAACAGAACTGAAGTTTGCCTCTTTCTCTTATTTCCACCCTTTTCTGTTCTGATGAAACTGGATCAGATTGACAAGTCTAAAGTACCAAAAGATGAAATGCAAGATGGAGGGCTCTCTCATGAAGATTCAATCAGCCCTCGTTCTAAGAAACTTCAAGATGACCTGCAAACTCTAGGGATGAAAATCCAGCTGCATGAGGACAACATAAGGTTTCTAAAGACTCTGAAAGACAAATTAGTCGATTCCATCGTTGATCTGCAAGTAATCCTAGGAAAGTACCATGCTTCGAGCACGCCTAAGATTGAGAACAAGGATGGTTCTGATACTCAAAGTGAAGACAAGCCATCAGATCAGATACTACAGCAGGAAAACACTGCTGCTAGCATCTTGTGCCAGCTGAAAACCAATCCAAAGATGTTGGCTTCTGATCCTACACTGACTGATGATGTGCTTGGTGTTGTTGCTGAACTTGGAAAAGTTGATGACAGTAGCCTTAGCAGCCTTTTATCGGAGTACCTAGGAACAGAGACAATGCTGGCTATTGTCTGCAAGACATACAATGGAGTAAAATCTTTGGAGAAGTATGACAAGGAAGGAAGCATAAATAAAACATCCGGGCTTCACGGATTCAGCACTTCACTTGGGAAAACTTTAGAGGGTCGATTCAATGTCATATCTCTCGAAACATTGAGACCATATGCTGGTGAATTTTTGGCCGATGATCTGCAAAGAAGGCTGGATATTCCGAAGCCAAGACTGCCTAATGGGGACTGTCCAACCGGTTTTCTTGGTTATGCTGTCAATATGATAAACATAGACAGAACACACTTGTTTTTTCTCACAGCAAGCGGCTATGGTCTCAGAGAGACTTTGTTTTATTCTCTATTTTCTTGTCTGCAAGTCTATAAAACAAGGGCTGAAATGCTACAAGCCTTTCCTTGTATTACCGATGGAGCGCTTTCTTTGGATGGTGGGATTATTAAGCGGAGTGGACTGTTTTGTCTTGGAAACAGGGACGAAGTGAAGGTGAGCTTTTCAAAGACCTCAACAGATTCAAGCCTACCTGACCATTACACCGAATCTGAGAGGCAGATGAAAGAAATGAAATGGAAAAAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAAGCACTGCTAGATAGCACGAAGCTCAATTTCGAAAGAAAGAAGGTGGAGTTTGTCCAGTTCCTTGCTGAAACAGCCGCTCGGGTAAGCTCCAAACCAACCCCACAAATATACTGTACTATGGCAAATGGCTTTGCATTTGACTTCAATTTGCAACAACCTAGCTTCTGTCTTTTTATTTTATTTGTACATTTTCTTGTTTCCTTGCACTGGAATTTTGTTCAATGTCGCCGTCATTGAACTTGAACGAGTTACTCGGTTAACTGTCCTATTCAAACTGTTACAAACTGTCTTTCCCTTGAATGATCTGATATCCTTAAATAGATATAAACCACACAATGTGCTATTGGCTCTTCTAAAATTTGAAGTGCATCAAATGAACTTTTATGAGTATTTTACAATGCCATTTTGCTTGCTGCCAATGCCTTTGTAAGTCCAATGTGGCTACTATATGAACATGCTGTCATATATTGATCATTAAATCAAGTCATTTCTTATATAATGGCAGCAACAAACTCCAGTAGCAACTGGGAGAAAGGGCGGTAGGTGATGCCGAGCAAAGAAGGATCGGCCAACCATCGAAGGGATGACTGAATGTTTTGGAAGTTTCGGGTCGATCGATGCTTTGGTTTATTGTAAAATATGCATCCGGGCTGGAAAGGTGATGCCTTTTTCAGGGTGAAGGAAGGAAATGGGAGTATTTTTGTAGTGCCAATTTTGTGATGTGAAATAGATTGTGGTTCTGCAAAGACCAAGTCTATATGAAGCTTCCTTTGACAGTTCTATGATGGTGCTTTCTTTCACCCCTTCATATCTTCCCACTATGCCTCAAAAATTTAGGGTTCTTAATCACTCTTCCAAGGCAATTGGTTTTCAAATTTATGAAATCCCTACAATTTTTTTTTTTGAAAATTATGAAATCCCTACAATTATACTTCTTTTTAGATGGTAATCGATGTCTCGTCCACTCAGTTATGG ATGAAACTGGATCAGATTGACAAGTCTAAAGTACCAAAAGATGAAATGCAAGATGGAGGGCTCTCTCATGAAGATTCAATCAGCCCTCGTTCTAAGAAACTTCAAGATGACCTGCAAACTCTAGGGATGAAAATCCAGCTGCATGAGGACAACATAAGGTTTCTAAAGACTCTGAAAGACAAATTAGTCGATTCCATCGTTGATCTGCAAGTAATCCTAGGAAAGTACCATGCTTCGAGCACGCCTAAGATTGAGAACAAGGATGGTTCTGATACTCAAAGTGAAGACAAGCCATCAGATCAGATACTACAGCAGGAAAACACTGCTGCTAGCATCTTGTGCCAGCTGAAAACCAATCCAAAGATGTTGGCTTCTGATCCTACACTGACTGATGATGTGCTTGGTGTTGTTGCTGAACTTGGAAAAGTTGATGACAGTAGCCTTAGCAGCCTTTTATCGGAGTACCTAGGAACAGAGACAATGCTGGCTATTGTCTGCAAGACATACAATGGAGTAAAATCTTTGGAGAAGTATGACAAGGAAGGAAGCATAAATAAAACATCCGGGCTTCACGGATTCAGCACTTCACTTGGGAAAACTTTAGAGGGTCGATTCAATGTCATATCTCTCGAAACATTGAGACCATATGCTGGTGAATTTTTGGCCGATGATCTGCAAAGAAGGCTGGATATTCCGAAGCCAAGACTGCCTAATGGGGACTGTCCAACCGGTTTTCTTGGTTATGCTGTCAATATGATAAACATAGACAGAACACACTTGTTTTTTCTCACAGCAAGCGGCTATGGTCTCAGAGAGACTTTGTTTTATTCTCTATTTTCTTGTCTGCAAGTCTATAAAACAAGGGCTGAAATGCTACAAGCCTTTCCTTGTATTACCGATGGAGCGCTTTCTTTGGATGGTGGGATTATTAAGCGGAGTGGACTGTTTTGTCTTGGAAACAGGGACGAAGTGAAGGTGAGCTTTTCAAAGACCTCAACAGATTCAAGCCTACCTGACCATTACACCGAATCTGAGAGGCAGATGAAAGAAATGAAATGGAAAAAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAAGCACTGCTAGATAGCACGAAGCTCAATTTCGAAAGAAAGAAGGTGGAGTTTGTCCAGTTCCTTGCTGAAACAGCCGCTCGGGTAAGCTCCAAACCAACCCCACAAATATACTGTACTATGGCAAATGGCTTTGCATTTGACTTCAATTTGCAACAACCTAGCTTCTGTCTTTTTATTTTATTTGTACATTTTCTTGTTTCCTTGCACTGGAATTTTGTTCAATGTCGCCGTCATTGA MKLDQIDKSKVPKDEMQDGGLSHEDSISPRSKKLQDDLQTLGMKIQLHEDNIRFLKTLKDKLVDSIVDLQVILGKYHASSTPKIENKDGSDTQSEDKPSDQILQQENTAASILCQLKTNPKMLASDPTLTDDVLGVVAELGKVDDSSLSSLLSEYLGTETMLAIVCKTYNGVKSLEKYDKEGSINKTSGLHGFSTSLGKTLEGRFNVISLETLRPYAGEFLADDLQRRLDIPKPRLPNGDCPTGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFSCLQVYKTRAEMLQAFPCITDGALSLDGGIIKRSGLFCLGNRDEVKVSFSKTSTDSSLPDHYTESERQMKEMKWKKEKMLEDMRREQALLDSTKLNFERKKVEFVQFLAETAARVSSKPTPQIYCTMANGFAFDFNLQQPSFCLFILFVHFLVSLHWNFVQCRRH Homology
BLAST of Lcy11g000570 vs. ExPASy Swiss-Prot
Match: Q94A79 (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS3 PE=1 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 8.8e-110 Identity = 214/402 (53.23%), Postives = 293/402 (72.89%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy Swiss-Prot
Match: F4KFS5 (Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 OS=Arabidopsis thaliana OX=3702 GN=GMI1 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.5e-32 Identity = 121/373 (32.44%), Postives = 181/373 (48.53%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy TrEMBL
Match: A0A6J1JC57 (protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483128 PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 5.8e-197 Identity = 355/395 (89.87%), Postives = 375/395 (94.94%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy TrEMBL
Match: A0A6J1E8G6 (protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430834 PE=4 SV=1) HSP 1 Score: 691.8 bits (1784), Expect = 1.9e-195 Identity = 352/395 (89.11%), Postives = 376/395 (95.19%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy TrEMBL
Match: E5GBA2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 672.9 bits (1735), Expect = 9.0e-190 Identity = 343/398 (86.18%), Postives = 368/398 (92.46%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy TrEMBL
Match: A0A5D3DZ76 (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003790 PE=4 SV=1) HSP 1 Score: 672.2 bits (1733), Expect = 1.5e-189 Identity = 343/398 (86.18%), Postives = 367/398 (92.21%), Query Frame = 0
BLAST of Lcy11g000570 vs. ExPASy TrEMBL
Match: A0A1S3CS36 (protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo OX=3656 GN=LOC103504141 PE=4 SV=1) HSP 1 Score: 671.0 bits (1730), Expect = 3.4e-189 Identity = 342/395 (86.58%), Postives = 366/395 (92.66%), Query Frame = 0
BLAST of Lcy11g000570 vs. NCBI nr
Match: XP_022985034.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita maxima]) HSP 1 Score: 696.8 bits (1797), Expect = 1.2e-196 Identity = 355/395 (89.87%), Postives = 375/395 (94.94%), Query Frame = 0
BLAST of Lcy11g000570 vs. NCBI nr
Match: XP_022923033.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita moschata]) HSP 1 Score: 691.8 bits (1784), Expect = 3.8e-195 Identity = 352/395 (89.11%), Postives = 376/395 (95.19%), Query Frame = 0
BLAST of Lcy11g000570 vs. NCBI nr
Match: KAG6576650.1 (Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 691.4 bits (1783), Expect = 5.0e-195 Identity = 352/395 (89.11%), Postives = 376/395 (95.19%), Query Frame = 0
BLAST of Lcy11g000570 vs. NCBI nr
Match: XP_023551720.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 689.9 bits (1779), Expect = 1.5e-194 Identity = 351/395 (88.86%), Postives = 375/395 (94.94%), Query Frame = 0
BLAST of Lcy11g000570 vs. NCBI nr
Match: XP_038878420.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Benincasa hispida] >XP_038878427.1 protein DEFECTIVE IN MERISTEM SILENCING 3-like [Benincasa hispida]) HSP 1 Score: 688.7 bits (1776), Expect = 3.3e-194 Identity = 352/395 (89.11%), Postives = 373/395 (94.43%), Query Frame = 0
BLAST of Lcy11g000570 vs. TAIR 10
Match: AT3G49250.1 (defective in meristem silencing 3 ) HSP 1 Score: 398.7 bits (1023), Expect = 6.3e-111 Identity = 214/402 (53.23%), Postives = 293/402 (72.89%), Query Frame = 0
BLAST of Lcy11g000570 vs. TAIR 10
Match: AT5G24280.1 (gamma-irradiation and mitomycin c induced 1 ) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-33 Identity = 121/373 (32.44%), Postives = 181/373 (48.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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