Lcy11g000500 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g000500
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	50S ribosomal protein L9, chloroplastic
Location	Chr11: 540580 .. 543035 (-)
RNA-Seq Expression	Lcy11g000500
Synteny	Lcy11g000500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGCAACACGGACTCGGTACCGGTCGCCGTCGTCGGAACGCCCTCAGCTTCTTTAGAAAGGGTTTATCCATTATCGTCCGGCCGCAAAGCCACCGCCGGTAATTCGTTCTTCTATTTTTCTACAGTAATTTACTCTTTCTTCTTCCTGCACCCTATTTTTGCATCAATGCACGTTTGTTGAGGTTTGTAGCTCTAAATTTTCCATTTTCTTTTACAGACTCGTTGTAAGATCAGAATGGCTTGTATTCAATATGGTAGAAATGCACTCCGGCAAATTATTAAAGATTCTAGGCTTCATCCTTCTGATCAAATGATGCAGCCACTGATATTTTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAGTGAGTACGTGACTTCATTATTTTTAGTTTTCTTGCCTGAACGTTGGATTTTATGGACAATTAACTGAATAATACTTACTTTGATGTTTAAAAAGAGCATAGAAAAGCTTGGAAAGGCTGGTGAGACAGTTAAGGTTGCCCCTGGATACTTTCGGAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTGATCAAGGAGCAGCGCAGGGTATTTCTCTGCAACACAGATCTTATCGGTGATTTTTGATTATTTGTACATAACGCGTTCATGCTGTTGTTTCCTTGATTGCATTGATTACTCTTACTTTGTTGTTCCCTTCAATTGCAAAGAGGGGCTGGGGAGATGACAAATGAACTGACTTGACGGGAAATCATGCTATCTTTTCTTTATTACGTGCTTGATATGTTTATTTTTTATGATTTGCAATTTTTAGCGACCCACATGACAACGCATTTGGGAGTTAAAAAATGTCTCATCTTTTGTCTGTCTGTTGTTTTCTCTGATAGCTAGACGTTGGTTGCATCTCCATGGTAGATTTCTTGCGAGGGTTCAGATACTTCTCTTTGTTTTTTGATAATTTCAATTTGTTTGAATTTAGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTAACAGTGACCAAGGAGGATAAGATGAAAGAATATGAAAAGGCAGCAAAACGTCTGGATAGCACTCAGCTGGTTTGTAACCCCTAGTTTTATCCATAATTAGCTCTATATATGTTTTTTTCTTCCCCAATTTTCAAATTTTGAAATAAGTTACACTCAAGAATGATTTACTAATTTGATGTTTAACTTATGGTCTTAAAATTCTAAGACCTTTTCCCTACCTAGTTAAAACAGAGCACTAAGAATTGAGTAAATTGGTGCACTAAACGATTTAAGTGATTGTCACAAGTTTTCTTCTAAAGATTGGAAAATTTTGGATACTATGATATTCCTCCAAATCGATATATTTATGAGCCATATCTGATGTTTGTATATTTTTTAGGTGTTAAGGAGGTTGATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTAGCTTTGCAATCTTCTGTCACAGTAGACGACCTTGTTGAAGAGGTAGGCTTTGATCAATACTTGTGTACTTATTGAGTTTAGATGATTGTTTACTTGTTCCTAGAGGATGGGCTAGTTGACCTTGTCGGTGAAGTAGGCTTTAATTGGATTGATGCTTTCCTTCCTTCCCCCCCTCCCCTTCAAATTATAAGATAACCTTTTATTTTAGAATCATAGGAAAAGGCTTAACCGTTTAATCACTGTGTTCTTTTGAGAGCTTTGCATTTCAGAATCTATCGTATCTTTTATTTTGCCTTTGAGTTTTTTTTTTTTTTTGGGGGGGGGGGGCTTGATGATGTAGTAATGTAGTAATGTCAAACTTGAGAATAGGATAGAGATGATTTGCAAGGTTGAAGGACCTCAGATCAAACATTTGAGTAAGATTTTCTGTTTTTAACAACTAACAGACGATGGGACTGAATCAAGATTTGGGATGAGATTGATGACACTCATTTTTAGTCTTTTATATCAATAAATACTTCATTCTTCTTTTCTAATATCGACCTACATATTTTTTCTTTTCCGGTTTAGGTGGCACGACAACTTTCTATTCAAATTACGCCTGAAAATCTACATCTGCCATCTCCCCTGTCCACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAATCGATCCCGTTGCCTGAAGGAAAGATCTACTGGACCCTCAAAGTTAAAGTCCGTAGTAAATAAAAAGTGTGAAACAGCTTGCTCTTGCATTATGGTGCCTATGGTTTTGGTTTCTTAAGATCACTAGGCCTCTAGTTTTAATGAGGAACTCCATAATTTCGTATCCTCAACCAAGTATTTATTTTTTGACCTTAAAAGCTAGCTGTTTGTTGTTTCCTCAATGATTGAAATGAAGCTCTTTGCTAAACAAATTCAATGGATTCACACTATGAGACAAATGAATCAAATGCTTTAACAGCCA

mRNA sequence

ATCAGCAACACGGACTCGGTACCGGTCGCCGTCGTCGGAACGCCCTCAGCTTCTTTAGAAAGGGTTTATCCATTATCGTCCGGCCGCAAAGCCACCGCCGACTCGTTGTAAGATCAGAATGGCTTGTATTCAATATGGTAGAAATGCACTCCGGCAAATTATTAAAGATTCTAGGCTTCATCCTTCTGATCAAATGATGCAGCCACTGATATTTTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAAGCATAGAAAAGCTTGGAAAGGCTGGTGAGACAGTTAAGGTTGCCCCTGGATACTTTCGGAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTGATCAAGGAGCAGCGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTAACAGTGACCAAGGAGGATAAGATGAAAGAATATGAAAAGGCAGCAAAACGTCTGGATAGCACTCAGCTGGTGTTAAGGAGGTTGATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTAGCTTTGCAATCTTCTGTCACAGTAGACGACCTTGTTGAAGAGGTGGCACGACAACTTTCTATTCAAATTACGCCTGAAAATCTACATCTGCCATCTCCCCTGTCCACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAATCGATCCCGTTGCCTGAAGGAAAGATCTACTGGACCCTCAAAGTTAAAGTCCGTAGTAAATAAAAAGTGTGAAACAGCTTGCTCTTGCATTATGGTGCCTATGGTTTTGGTTTCTTAAGATCACTAGGCCTCTAGTTTTAATGAGGAACTCCATAATTTCGTATCCTCAACCAAGTATTTATTTTTTGACCTTAAAAGCTAGCTGTTTGTTGTTTCCTCAATGATTGAAATGAAGCTCTTTGCTAAACAAATTCAATGGATTCACACTATGAGACAAATGAATCAAATGCTTTAACAGCCA

Coding sequence (CDS)

ATGGCTTGTATTCAATATGGTAGAAATGCACTCCGGCAAATTATTAAAGATTCTAGGCTTCATCCTTCTGATCAAATGATGCAGCCACTGATATTTTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAAGCATAGAAAAGCTTGGAAAGGCTGGTGAGACAGTTAAGGTTGCCCCTGGATACTTTCGGAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTGATCAAGGAGCAGCGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTAACAGTGACCAAGGAGGATAAGATGAAAGAATATGAAAAGGCAGCAAAACGTCTGGATAGCACTCAGCTGGTGTTAAGGAGGTTGATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTAGCTTTGCAATCTTCTGTCACAGTAGACGACCTTGTTGAAGAGGTGGCACGACAACTTTCTATTCAAATTACGCCTGAAAATCTACATCTGCCATCTCCCCTGTCCACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAATCGATCCCGTTGCCTGAAGGAAAGATCTACTGGACCCTCAAAGTTAAAGTCCGTAGTAAATAA

Protein sequence

MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK

Homology

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BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot
Match: Q2IM65 (50S ribosomal protein L9 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=rplI PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 42  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE 101
           +++IL   +E LGK G+ V V PGY RN+L+P+ LAV    K    ++ Q          
Sbjct: 1   MKLILREDVENLGKGGDLVDVKPGYGRNYLLPRGLAVSANPKNVKELEHQ---------- 60

Query: 102 VVKVVTVTKEDKMKEYEKA-AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD 161
             K V   K  K+K   +A AKRL  T + L+R + ++             L  SVT  D
Sbjct: 61  --KAVAAAKAAKLKASAQAVAKRLSETPVTLKRKVGEQD-----------KLYGSVTALD 120

Query: 162 LVEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK 215
           + E +A +  +Q+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Sbjct: 121 VAEALAAR-GVQLDRRSIVLDEPIKTLGEFEVPVKLHSEV---AGKVKVTVEAE 147

[Close]

BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot
Match: B8J801 (50S ribosomal protein L9 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) OX=455488 GN=rplI PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 42  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE 101
           +++IL   +E LGK G+ V V PGY RN L+P+ LAV    K    ++ Q          
Sbjct: 1   MKLILREDVENLGKGGDLVDVKPGYGRNFLLPRGLAVTANPKNVKELEHQ---------- 60

Query: 102 VVKVVTVTKEDKMKEYEKA-AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD 161
             K V   K  K+K   +A AKRL  T + L+R + ++             L  SVT  D
Sbjct: 61  --KAVAAAKAAKLKASAQAVAKRLSETPVTLKRKVGEQD-----------KLYGSVTALD 120

Query: 162 LVEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK 215
           + E +A +  +Q+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Sbjct: 121 VAEALAAR-GVQLDRRSIVLDEPIKTVGEFEVPVKLHSEV---AGKVKVTVEAE 147

[Close]

BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot
Match: B4ULB9 (50S ribosomal protein L9 OS=Anaeromyxobacter sp. (strain K) OX=447217 GN=rplI PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 42  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE 101
           +++IL   +E LGK G+ V V PGY RN L+P+ LAV    K    ++ Q          
Sbjct: 1   MKLILREDVENLGKGGDLVDVKPGYGRNFLLPRGLAVTANPKNVKELEHQ---------- 60

Query: 102 VVKVVTVTKEDKMKEYEKA-AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD 161
             K V   K  K+K   +A AKRL  T + L+R + ++             L  SVT  D
Sbjct: 61  --KAVAAAKAAKLKASAQAVAKRLSETPVTLKRKVGEQD-----------KLYGSVTALD 120

Query: 162 LVEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK 215
           + E +A +  +Q+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Sbjct: 121 VAEALAAR-GVQLDRRSIVLDEPIKTVGEFEVPVKLHSEV---AGKVKVTVEAE 147

[Close]

BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot
Match: A7H6J2 (50S ribosomal protein L9 OS=Anaeromyxobacter sp. (strain Fw109-5) OX=404589 GN=rplI PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 57/178 (32.02%), Postives = 85/178 (47.75%), Query Frame = 0


Query: 42  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE 101
           +++IL   +E LGK GE V V PGY RN L+P+ LAV    K    ++ Q          
Sbjct: 1   MKLILREDVENLGKGGELVDVKPGYGRNFLLPRGLAVLANPKNVRELEHQ---------- 60

Query: 102 VVKVVTVTKEDKMKEYEKA-AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD 161
             K +   K  KMK   +A AKRL  T + L R + ++             L  SVT  D
Sbjct: 61  --KAIATAKAAKMKASAQAVAKRLAETPITLSRKVGEQD-----------KLYGSVTAMD 120

Query: 162 LVEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           + E +A +  +QI    + L  P+ T G++EVP++    +    GK+    KVKV ++
Sbjct: 121 VAEALAAR-GLQIDRRAIDLAEPIKTTGDFEVPVKLHSEV---VGKV----KVKVEAE 147

[Close]

BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot
Match: B9MQN7 (50S ribosomal protein L9 OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=rplI PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09
Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 42  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE 101
           ++V+L   ++ LGK    V+V  GY RN+L+P+ LAVP  +     +KE++   Q     
Sbjct: 1   MKVVLLQDVKGLGKKDSVVEVNDGYARNYLIPRKLAVPATEGLEKHLKEKKEAEQK---- 60

Query: 102 VVKVVTVTKEDKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDL 161
                   KE +++  +  A +L+ +Q+++           +A   E   L  S+T  ++
Sbjct: 61  -------KKEKELEAAKDLASKLEKSQIII-----------KAKAGENGKLFGSITNKEI 120

Query: 162 VEEVARQLSIQITPENLHLPSPLSTCGEYEVPLRFPKSI 201
            EE+ +QL   I  + + L  P+   G Y+V +R  + +
Sbjct: 121 AEEIKKQLGFDINKKKIELDDPIKLIGSYDVVIRLYQGV 137

[Close]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL
Match: A0A6J1HYV2 (50S ribosomal protein L9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467481 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.1e-111
Identity = 209/218 (95.87%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL
Match: A0A6J1FZ52 (50S ribosomal protein L9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449243 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 207/218 (94.95%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYL+KEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLVKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYW+LKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWSLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL
Match: A0A6J1CID3 (50S ribosomal protein L9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011756 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.7e-110
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MAC+QYGRNALRQIIKD+RLH SDQM+QPL+F SQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACVQYGRNALRQIIKDTRLHTSDQMIQPLLFRSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPG+FRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEE+VKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGFFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEIVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFR RATKDEPLALQSSVTVDDLV EVARQLS+QITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRARATKDEPLALQSSVTVDDLVAEVARQLSVQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           PSPLSTCGEYEVPLRFPKSIPLPEGKIYW LKVKVRSK
Sbjct: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWILKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL
Match: A0A1S3C248 (50S ribosomal protein L9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496047 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 197/218 (90.37%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYGRNALR+IIKD+ LHPSDQMMQPL+F+ QGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGRNALRKIIKDTTLHPSDQMMQPLLFTGQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPK+LAVPNI+KYA+LIKEQRRIYQPVEEEVVKVVT+TKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKILAVPNIEKYAHLIKEQRRIYQPVEEEVVKVVTLTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLD  QLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+V EVARQ S+QI PENL+L
Sbjct: 121 AKRLDCKQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           PSPLS CGEYEV LRFPKSIPLPEGK+YWTLKVKVRSK
Sbjct: 181 PSPLSACGEYEVALRFPKSIPLPEGKVYWTLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL
Match: A0A0A0LAH8 (50S ribosomal protein L9, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G238230 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105
Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQY RNALR IIKD++LHPSDQMMQPL+FS QGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 71  MACIQYCRNALRNIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETV 130

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPK+LAVPNI+KYAYLIKEQRRIYQPVEEEVVKVVT+TKEDKMKEYEKA
Sbjct: 131 KVAPGYFRNHLMPKILAVPNIEKYAYLIKEQRRIYQPVEEEVVKVVTLTKEDKMKEYEKA 190

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           A+RLDS QLVLRRLIDKEKFRTRA KDEPLALQSSVTVDD+V EVARQ S+QI PENL+L
Sbjct: 191 ARRLDSKQLVLRRLIDKEKFRTRAAKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNL 250

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
            SPLS CGEYEVPLRFPKSIPLPEGK+YWTLKVKVRSK
Sbjct: 251 ASPLSACGEYEVPLRFPKSIPLPEGKVYWTLKVKVRSK 288

[Close]

BLAST of Lcy11g000500 vs. NCBI nr
Match: XP_022968164.1 (uncharacterized protein LOC111467481 [Cucurbita maxima])

HSP 1 Score: 411.0 bits (1055), Expect = 6.4e-111
Identity = 209/218 (95.87%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. NCBI nr
Match: KAG6574247.1 (hypothetical protein SDJN03_28134, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110
Identity = 208/218 (95.41%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYW+LKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWSLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. NCBI nr
Match: XP_022944820.1 (uncharacterized protein LOC111449243 [Cucurbita moschata])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 207/218 (94.95%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYL+KEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLVKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYW+LKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWSLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. NCBI nr
Match: XP_038895552.1 (50S ribosomal protein L9 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.4e-110
Identity = 206/218 (94.50%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYGRNALRQIIKD+RLHPSD+MMQPL+FSSQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGRNALRQIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPG+FRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPV+EEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGFFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVDEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+V EVARQ S+QI PENL+L
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           PSPLSTCGEYE+PLRFPKSIPLPEGKIYWTLKVKVRSK
Sbjct: 181 PSPLSTCGEYEIPLRFPKSIPLPEGKIYWTLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. NCBI nr
Match: KAG7013316.1 (rplI [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407.1 bits (1045), Expect = 9.3e-110
Identity = 207/218 (94.95%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MACIQYGRNALRQIIKDSRLHPSDQMMQPLIFSSQGVRHRKLEVILTTSIEKLGKAGETV 60
           MACIQYG+NAL++IIKD+RLHPSD+MMQPL+F SQGVRHRKLEVILTTSIEKLGKAGETV
Sbjct: 1   MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFLSQGVRHRKLEVILTTSIEKLGKAGETV 60

Query: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120
           KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA
Sbjct: 61  KVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKA 120

Query: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPENLHL 180
           AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLV EVARQLSIQITPENLHL
Sbjct: 121 AKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHL 180

Query: 181 PSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK 219
           P+PL TCGEYEVPLRFPKSIPLPEGKIYW+LKVKVRSK
Sbjct: 181 PAPLPTCGEYEVPLRFPKSIPLPEGKIYWSLKVKVRSK 218

[Close]

BLAST of Lcy11g000500 vs. TAIR 10
Match: AT5G53070.1 (Ribosomal protein L9/RNase H1 )

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-68
Identity = 134/219 (61.19%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 1   MACIQYGRNALRQII-KDSRLHPSDQMM-QPLIFSSQGVRHRKLEVILTTSIEKLGKAGE 60
           MA +   RN +R ++ + +  H  +  +  PL+F+ QGVR+RKLEVILTT IEKLGKAGE
Sbjct: 1   MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60

Query: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVE-EEVVKVVTVTKEDKMKEY 120
           TVKVAPGYFRNHLMPKLLAVPNIDKYAYLI+EQR++Y   E +E VKVV  T E + KEY
Sbjct: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEY 120

Query: 121 EKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVEEVARQLSIQITPEN 180
           EKAAKRL +  LVLR+L+DKEKF+ R++KD+   +Q+ +T +++V EVARQL ++I P+N
Sbjct: 121 EKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDN 180

Query: 181 LHLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVR 217
           + L +PL T GEYEVPL+FPK+IPLP+G + W LKVKVR
Sbjct: 181 VVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVR 219

The following BLAST results are available for this feature:

BLAST of Lcy11g000500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2IM65	1.0e-10	30.46	50S ribosomal protein L9 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=2903...	[more]
B8J801	2.3e-10	30.46	50S ribosomal protein L9 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC B...	[more]
B4ULB9	2.3e-10	30.46	50S ribosomal protein L9 OS=Anaeromyxobacter sp. (strain K) OX=447217 GN=rplI PE...	[more]
A7H6J2	3.9e-10	32.02	50S ribosomal protein L9 OS=Anaeromyxobacter sp. (strain Fw109-5) OX=404589 GN=r...	[more]
B9MQN7	2.5e-09	25.79	50S ribosomal protein L9 OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / ...	[more]

BLAST of Lcy11g000500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYV2	3.1e-111	95.87	50S ribosomal protein L9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1FZ52	1.2e-110	94.95	50S ribosomal protein L9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CID3	7.7e-110	94.50	50S ribosomal protein L9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3C248	3.3e-105	90.37	50S ribosomal protein L9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496047 ...	[more]
A0A0A0LAH8	5.7e-105	90.37	50S ribosomal protein L9, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G2382...	[more]

BLAST of Lcy11g000500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968164.1	6.4e-111	95.87	uncharacterized protein LOC111467481 [Cucurbita maxima]	[more]
KAG6574247.1	1.9e-110	95.41	hypothetical protein SDJN03_28134, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022944820.1	2.4e-110	94.95	uncharacterized protein LOC111449243 [Cucurbita moschata]	[more]
XP_038895552.1	5.4e-110	94.50	50S ribosomal protein L9 [Benincasa hispida]	[more]
KAG7013316.1	9.3e-110	94.95	rplI [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lcy11g000500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53070.1	1.9e-68	61.19	Ribosomal protein L9/RNase H1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020069	Ribosomal protein L9, C-terminal	PFAM	PF03948	Ribosomal_L9_C	coord: 147..199 e-value: 2.2E-5 score: 24.8
IPR020070	Ribosomal protein L9, N-terminal	PFAM	PF01281	Ribosomal_L9_N	coord: 43..79 e-value: 1.6E-13 score: 50.0
IPR036935	Ribosomal protein L9, N-terminal domain superfamily	GENE3D	3.40.5.10		coord: 42..96 e-value: 2.1E-13 score: 51.5
IPR036791	Ribosomal protein L9, C-terminal domain superfamily	GENE3D	3.10.430.100		coord: 112..217 e-value: 3.2E-7 score: 32.3
IPR036791	Ribosomal protein L9, C-terminal domain superfamily	SUPERFAMILY	55653	Ribosomal protein L9 C-domain	coord: 112..215
IPR000244	Ribosomal protein L9	PANTHER	PTHR21368	50S RIBOSOMAL PROTEIN L9	coord: 1..217
None	No IPR available	PANTHER	PTHR21368:SF24	BNAA02G10490D PROTEIN	coord: 1..217
IPR009027	Ribosomal protein L9/RNase H1, N-terminal	SUPERFAMILY	55658	L9 N-domain-like	coord: 42..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g000500.1	Lcy11g000500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome