Lcy11g000090 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCACAAGCTGGGATTATGAGACATCTAAATCCACAATCACTTGCCCCACAAGCTCTCAAATATCTAGCAGTTTCCAACATATGGCAGAATCCAGTTATATAAAACATCGATATTATATGTTGGATGATTTTTTTGGTGATTTCACTGGAGGAAGCTGTAAAACATGGCTGCTTTCGCCTCATTGCCCCTAACTTCATCTTCGTCTTCATCTTCTTTACATCCTATTGTCCAATTCTCCCCTATTGTATTCTCCTCAAAAGTTCTTTATGACCCAAGTTCCTATCACCTTACAGTCAGATCAATCAGACAAGGAAAGAAAAAATTTCCCTCTCAGACCAAACCAAGGAGCTTGATAATCCTCGGTGCAGCAACAAAACAAGCAAAAACACCAGGTATTCTCTTCTTGTTGATCTAATAGTTAATCAGACAGTCCAGGTAATATGGTATAAATTTCAGTCTTTTTAGTTTTAATTCACTTGTATAAAAGTGGGTTTATTCTCTTCTATCTGGAGGATTCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAGCTTCTGCTGCAGAAAAGGGTTGGAGTCTTTCTCTACAACTTCAGAGTATAATGGGATGGTGTTCAGTTGACTGTTCTAAAAAAACTACGTGGAAACACATCGCACAAGTTTTCGTCCAAAATGCATCCAAAAGTATATCAGAAAGACCAAATTTTGGTCGTAACAAAGCCTGAAACATTGTGAAATGAAGTTTTAACAAATAGTTCCACAACTACGTTAGAAACCTAATAGCATGATGAGGGGAGAATGGTTTTGGTTCTCAACAACTAATGTTCAAGTTCCTTAACAAAAGAATTAAGATTCTCACCCTGGTGATTTCACTGCAGGTAAGGAGTGTGGATGTGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTTGTGATTCTTGATGTAAGGCCAGAAGCAGAATTCAAAGAGGTTAGTGCATTTGCACTTTTGAAGGTCGACTAGCTGACAGTGGATCAATGTGTGATGATTTGCATTTTCCTCCAAGTTCAGAACAACCAATGTAATGTTACATACTTATTTCCACTGATTTGGTGCAGGGCCATCCACCAGGTGCCACTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATCGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTAAGTTACTTGTGAACACCTTCACTCGACTTCTTGTTCTCAGGTGATATGCAGGATCAGAAGTGAATGACTGAGTATATCCCTACAGGTGTAGAATCTAAAATAGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACTCAGAATCTTCCAGAAGGTCAACAATCAAGGTATTGGAACTCTTGAAAGCAACTTTTTGAGTTTGTACACTCTCTCAAATTTCAGAGTAAATGCATATTATATGTGCATACATTTCCTTGACATTTTACAAACATCACTCTTCATTTGATTAGCTAACTGTTTAACGGATAGAACAGTTCAAACAACAATGATTGTTTCGTATGGTCAAAGAAATTTACCAGCCGGTAAATAATATGAAGAATAAATAAGATGAATCCTGCAAGGGTGTAAGTCAGATTAAACTGCAGCCATTATCTCTCTTTAACTCAGCCGTTAGGGTCTTCAATTATGTGATGTGTTCGAAATCGATGTGTCTTCTTTTTCGTACTTGAGGATTAGTTGCTTTTTAATGTTATGGAAAAATAAATGTTTGGCATCAAGTTCAACTTTTACTACTTTGGACAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAACGTATTTCACTTAGAAGGTGGTCTCTACAGTTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAGTAAGGTATCTGCATCTTATGGTGCGATTGCAAGATCTTCTGCTACAACTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGTCGCCAATGAAGAGCAGAACCAAGTGCTCTCGCAAAGATCTGGTTGGGTTGAATGTTGACTATGGCAGCATCACCGCATTACAATCTTACCATCTGTGTGCTGAATCAGGGCCCATTTTAAGTGTGCAATTATAAGTTGGACAGCGTAGAAGACTAGATTTTGTTTCAGAATGGAATCCCCCCTCGCTTCTTTTGATGTTTGGTTTGTAATGAAAAATGTGTATGCATAACTTTTCGCTGGAAGTAATCATATTCTAGTCGATGTATTTGACTCTGTTAAATCAATAAATTAGTACAGCTTACTCTAAGATAGAAGGTTGCATGTTCTATGAATCATACAGTCATCGAAACTTATCAGTTAGCGTGCAGTAATACTCGGCCATCGTGTAGTAATCTGTCCTATTGTCGTGCTGCTTGCTTGTGGAGTGCTTGCATTTCAAGATGTGGAGAGAGATTATGAATGAAATTTGACCAGGTTGGGATTCTAGTACAAATGGAAACGTGTAAAATATCCAAAG CACCACAAGCTGGGATTATGAGACATCTAAATCCACAATCACTTGCCCCACAAGCTCTCAAATATCTAGCAGTTTCCAACATATGGCAGAATCCAGTTATATAAAACATCGATATTATATGTTGGATGATTTTTTTGGTGATTTCACTGGAGGAAGCTGTAAAACATGGCTGCTTTCGCCTCATTGCCCCTAACTTCATCTTCGTCTTCATCTTCTTTACATCCTATTGTCCAATTCTCCCCTATTGTATTCTCCTCAAAAGTTCTTTATGACCCAAGTTCCTATCACCTTACAGTCAGATCAATCAGACAAGGAAAGAAAAAATTTCCCTCTCAGACCAAACCAAGGAGCTTGATAATCCTCGGTGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAGCTTCTGCTGCAGAAAAGGGTAAGGAGTGTGGATGTGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTTGTGATTCTTGATGTAAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGTGCCACTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATCGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACTCAGAATCTTCCAGAAGGTCAACAATCAAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAACGTATTTCACTTAGAAGGTGGTCTCTACAGTTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAGTAAGGTATCTGCATCTTATGGTGCGATTGCAAGATCTTCTGCTACAACTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGTCGCCAATGAAGAGCAGAACCAAGTGCTCTCGCAAAGATCTGGTTGGGTTGAATGTTGACTATGGCAGCATCACCGCATTACAATCTTACCATCTGTGTGCTGAATCAGGGCCCATTTTAAGTGTGCAATTATAAGTTGGACAGCGTAGAAGACTAGATTTTGTTTCAGAATGGAATCCCCCCTCGCTTCTTTTGATGTTTGGTTTGTAATGAAAAATGTGTATGCATAACTTTTCGCTGGAAGTAATCATATTCTAGTCGATGTATTTGACTCTGTTAAATCAATAAATTAGTACAGCTTACTCTAAGATAGAAGGTTGCATGTTCTATGAATCATACAGTCATCGAAACTTATCAGTTAGCGTGCAGTAATACTCGGCCATCGTGTAGTAATCTGTCCTATTGTCGTGCTGCTTGCTTGTGGAGTGCTTGCATTTCAAGATGTGGAGAGAGATTATGAATGAAATTTGACCAGGTTGGGATTCTAGTACAAATGGAAACGTGTAAAATATCCAAAG ATGGCTGCTTTCGCCTCATTGCCCCTAACTTCATCTTCGTCTTCATCTTCTTTACATCCTATTGTCCAATTCTCCCCTATTGTATTCTCCTCAAAAGTTCTTTATGACCCAAGTTCCTATCACCTTACAGTCAGATCAATCAGACAAGGAAAGAAAAAATTTCCCTCTCAGACCAAACCAAGGAGCTTGATAATCCTCGGTGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAGCTTCTGCTGCAGAAAAGGGTAAGGAGTGTGGATGTGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTTGTGATTCTTGATGTAAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGTGCCACTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATCGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACTCAGAATCTTCCAGAAGGTCAACAATCAAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAACGTATTTCACTTAGAAGGTGGTCTCTACAGTTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAGTAA MAAFASLPLTSSSSSSSLHPIVQFSPIVFSSKVLYDPSSYHLTVRSIRQGKKKFPSQTKPRSLIILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDVNEALRLQKENNFVILDVRPEAEFKEGHPPGATNVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEGLPVVSEE Homology
BLAST of Lcy11g000090 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 6.7e-80 Identity = 145/181 (80.11%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08 Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08 Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06 Identity = 44/155 (28.39%), Postives = 74/155 (47.74%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy TrEMBL
Match: A0A0A0LC69 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238120 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 7.7e-119 Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy TrEMBL
Match: A0A6J1J8V6 (rhodanese-like domain-containing protein 14, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482801 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 218/241 (90.46%), Postives = 225/241 (93.36%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy TrEMBL
Match: A0A5A7U5J4 (Rhodanese-like domain-containing protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001880 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 218/241 (90.46%), Postives = 226/241 (93.78%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy TrEMBL
Match: A0A5D3CHJ7 (Rhodanese-like domain-containing protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001270 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 218/241 (90.46%), Postives = 226/241 (93.78%), Query Frame = 0
BLAST of Lcy11g000090 vs. ExPASy TrEMBL
Match: A0A6J1CH22 (rhodanese-like domain-containing protein 14, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011450 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 3.9e-115 Identity = 218/241 (90.46%), Postives = 223/241 (92.53%), Query Frame = 0
BLAST of Lcy11g000090 vs. NCBI nr
Match: XP_004146237.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucumis sativus] >KGN57646.1 hypothetical protein Csa_011416 [Cucumis sativus]) HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118 Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Lcy11g000090 vs. NCBI nr
Match: XP_038882948.1 (rhodanese-like domain-containing protein 14, chloroplastic [Benincasa hispida]) HSP 1 Score: 434.9 bits (1117), Expect = 4.6e-118 Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0
BLAST of Lcy11g000090 vs. NCBI nr
Match: KAA0050538.1 (rhodanese-like domain-containing protein 14 [Cucumis melo var. makuwa]) HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115 Identity = 218/241 (90.46%), Postives = 226/241 (93.78%), Query Frame = 0
BLAST of Lcy11g000090 vs. NCBI nr
Match: TYK11271.1 (rhodanese-like domain-containing protein 14 [Cucumis melo var. makuwa]) HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115 Identity = 218/241 (90.46%), Postives = 226/241 (93.78%), Query Frame = 0
BLAST of Lcy11g000090 vs. NCBI nr
Match: XP_022984535.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucurbita maxima]) HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115 Identity = 218/241 (90.46%), Postives = 225/241 (93.36%), Query Frame = 0
BLAST of Lcy11g000090 vs. TAIR 10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 298.5 bits (763), Expect = 4.8e-81 Identity = 145/181 (80.11%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Lcy11g000090 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 7.6e-10 Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 0
BLAST of Lcy11g000090 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09 Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Lcy11g000090 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 44/155 (28.39%), Postives = 74/155 (47.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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