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Lcy10g018840 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCTGTGTTCGCGCCGGTTTGGGTCTCGGTTTTGGGACAGTCTCTTCGCCGGTGTGAGGTCTCGGTTTACTATCGCTGTGGGTCTCGGGTAAACGCCGCGAGTCTTCTTGCCGGTCGGTCTCATTGTTTAGTCGTCGGGCTGTGAGTATCGATTCAGCATCGTGTCGCGGTTTGACACTGTTTTGAGGGTCTCAGATCAGAGGCGGCCTTGTTCATCAGTGGGTCTCGGTATAGGGGCGCTGAAACGAAGTTGTGAGTATTTCGCTTGAAGTTCAAATCGATTAAGGTTTGAGGTATTTTACCATTGTGTGATTTGTGCGAATATTGTACTCTGTATTGTTGACTGTTGCTGGTTAATAAAACTCTCATAAGCTGATTCTCAAAATGGATGTAGACCGAAAGGTTGAACCACTATATATCCTTGTATTTGTGCTTTGATTTATTTTACTGCTGGAAATTTGCGTCCTGTTTGACATATTTAAGTTCGCTTAAAATTCTCCACAAACAGTAGAAGCTGCTAAAGGTTCAGATGATGCTGAAACGAATCAGGGGCAAAATCCTGATTATGAAAGGTGGATAGCTGTTGATCAATTGTTGTTGGGTTGGTTATACAACTCAATGACTCAAGATGTTGCTACTCAAGTGATGGTCTTTAAAAATTTTAAAGACCTCTGGGGTGCTGTGTCAGAGCTATATGGAGTCCAATCAAGAGCTAAAGAGGATTATCTAGTACAAATTTTTCAACAAACACGGAAAGGGTCGTTAAAAATGTATGAATACTTACTAGTAATGAAATTGAATGCAGATAATGTAGCATTGGTTGGAAGTCTAGTTACGCTACTGATAACTCTCCAAAAGGGAGTTTTTTATAGTCCATTATCTGATGATTTGTATATTATTTGTGTCATTTTGATGTGTTCTTAGATGGATTTATTGTGTTTTAGCCTAATTATGAGAATTGATACTTTAGAGTTTCTTTGTAGAGAAATGTAAATGCTGACCAAGTTAAGAGAGCAAAGTTGACAATCCAGCAAAATATGGCTCATAGCCTGACGTGATTCATTAAATGAGGTGGTGTTTTTAGCATAGATCTCGTATTTATCAGGCTCGAAAAGCACTCCACGTGTCTTAATTAACCTAATTAGGTTAAACTCTCATTTTATAAATAGAGAAGCCATATGAAGTCAACACATTCGATCCTGGAGGCCGATTAGGGACCAAGAAACCAATTGGAGACTCAAGAAGACCATTTTGTGAATTCTCTCAAGGAAGACGAAGTCTTTCCATGCTCTTGATGGTTTGGAGCAGTCGTTTCAACCATCATTGCTAGAAGGATTAGTATTTTCTTGTGGAATTTATAATATGGATGTGCTTTATCAGGTTGTAACTTGCTTTATGTTTACTTTTATGAACTAATTTGCTTGTAGACAAGGGTTGAGAACTATGTAATTGTCATCCTTATAAAATCTGGAAATTCTTTGTGATTATGATCATCTTGACTGTTTGTTGTACCTAGTGCATGATTGGTAGTGCTTCATTGGAGTTGAAACACATTCCAAAAAATTCGGAGTTCCGGGAGGATCCCAATGGTAAGACTGCATGAGATTGACTGATAAAAAGAATTGCTGGATCATTTCTATAACAATTACAGAAGTCTTAACCGGTGTTTGTTTCCATTCTGTTTTCTCTAATCGTTTACGTTTTCTGTTTTCTCATTTCTTTTGCTTCAACATTTTAAAACCCAATCAATTTAACCAACTTTTGAAATTCACTAAAAGACTATTTAAAATCAATAGAGTGGCTCTATTCAAGACCCTGTGTGGATACGATAAATACCTATCACTTGTTGCTAATTGTGTATACTTATACGGTAATTTGGAGTGAATTCTATCAATATTTTTAACCACTTCAAAAGGCAACAAATTTTCGATGCCGCTCAAGAATTTCTCAAGTGCTACTCGAGCTTGACGATGAGTACAATCCTGTCATTGTGGTAATTCAAGGAAGATCCTCAATCACCTGGGCTGGGCTGAGCTGCAAGTTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGTACCAATTATTTCAACTTCGACAATCAACATGGCTAATACTCAAAATTCAGCCATCGGAAATCAGAAGAAAAACATGGGCAATCAAGGGATCAATGTGATTTTAGCAATTTCAATTCAAGAGGTGGACAAAGCCTTGGCGGGGGGTCATCTCGCCTCTGTATGCTATTTTCGTTTTGAGAAAGAATTTAACAATGCTGATCAAGTTCAAAATATATATTTTTTAATTTTTTAAAAATATTTTTTTAATCTATTTTTATTTCTTCTTATTCAACACCACCACCACCCAACCTACCGTCGGTAGCCACCAGCGACCGTTGCTCGCCAGTGGCAACAAATTTTTTTTCAAACCCTTTTCTTCTCCTTTTTTTCTTCTTTTCTTCTCCTTTCTCTCCATTTCCCTTTTTCTTTTTAAATAGAAAAGAGAGAGAGACGTCCTCCCTTTCTGGCACCGACGACACAATTACTCTCTCCGGTTAGTTTTGTTTTGAAAAAACACACGATTTCTCAAACCAATTCCAACACTGTCTTCATTCTTGCAACAAAAAATTTCAAATTCCAAAATCCAAAAACGGACCAATAATGAACACTCAAAAAGTTTCAATTCGATTTTCTTTTCTTTCTTTTTTTTTCTTACAGGCACGAAGGAAAATTCATAAAGAAAATGGTAGAAAGAATATAGAGCGAACTGAACGTTACATATCTAGAAGTGGCCATCTACCCTGTCGGCATCGACCTCCGTTTGCGACGGCTGAGCTCATTAATGGTGGTTTCCACAAACCACTCCATTCTCATCCTCGACATCTACGACATGAGCGGCATCGACAAAACCACTCTCTATAAAGCACTTTTCAACAAATACTTCCACTCCTTCCACTCCAGATCCTTCCTCCCCAACATCAACCACACTTCCACCGCCTCTTCGGACGACTTCCCCCACCTCCAGCAAACTCTCTTCTCCGATCTCCTCACTGTCTCCACCAAACTCCGCTCCTCCACCACCTCTGCAGTTGCCGTTGTCCAGATCTAACAGAGACTCTGCCAGAGGAAGTTCCTCGTAGTCCTTAACGACGTGGATCGAATCATAATCACGACGTGGAAGAAACAGATCCTCGATGCTCTGCAGGTCGATGAAGTTTACGATGCAGAGTTCGATCCACTCGACGACGATGAGTCGCTCGAGCTCTTCACCTACCACGCCTTTTGGTAA ATGGGTCTGTGTTCGCGCCGGTTTGGGTCTCGGTTTTGGGACAGTCTCTTCGCCGGTGTGAGGTCTCGGTTTACTATCGCTGTGGGTCTCGGCATCGTGTCGCGGTTTGACACTGTTTTGAGGGTCTCAGATCAGAGGCGGCCTTGTTCATCAGTGGGTCTCGTAGAAGCTGCTAAAGGTTCAGATGATGCTGAAACGAATCAGGGGCAAAATCCTGATTATGAAAGGTGGATAGCTGTTGATCAATTGTTGTTGGGTTGGTTATACAACTCAATGACTCAAGATGTTGCTACTCAAGTGATGGTCTTTAAAAATTTTAAAGACCTCTGGGGTGCTGTGTCAGAGCTATATGGAGTCCAATCAAGAGCTAAAGAGGATTATCTAGTACAAATTTTTCAACAAACACGGAAAGGGTCGTTAAAAATGAAGATCCTCAATCACCTGGGCTGGGCTGAGCTGCAAGTTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGTACCAATTATTTCAACTTCGACAATCAACATGGCTAATACTCAAAATTCAGCCATCGGAAATCAGAAGAAAAACATGGGCAATCAAGGGATCAATGTGATTTTAGCAATTTCAATTCAAGAGGTGGACAAAGCCTTGGCGGGGGGTCATCTCGCCTCTGCACGAAGGAAAATTCATAAAGAAAATGAAGTGGCCATCTACCCTGTCGGCATCGACCTCCGTTTGCGACGGCTGAGCTCATTAATGGTGGTTTCCACAAACCACTCCATTCTCATCCTCGACATCTACGACATGAGCGGCATCGACAAAACCACTCTCTATAAAGCACTTTTCAACAAATACTTCCACTCCTTCCACTCCAGATCCTTCCTCCCCAACATCAACCACACTTCCACCGCCTCTTCGGACGACTTCCCCCACCTCCAGCAAACTCTCTTCTCCGATCTCCTCACTGTCTCCACCAAACTCCGCTCCTCCACCACCTCTGCAGTCGATGAAGTTTACGATGCAGAGTTCGATCCACTCGACGACGATGAGTCGCTCGAGCTCTTCACCTACCACGCCTTTTGGTAA ATGGGTCTGTGTTCGCGCCGGTTTGGGTCTCGGTTTTGGGACAGTCTCTTCGCCGGTGTGAGGTCTCGGTTTACTATCGCTGTGGGTCTCGGCATCGTGTCGCGGTTTGACACTGTTTTGAGGGTCTCAGATCAGAGGCGGCCTTGTTCATCAGTGGGTCTCGTAGAAGCTGCTAAAGGTTCAGATGATGCTGAAACGAATCAGGGGCAAAATCCTGATTATGAAAGGTGGATAGCTGTTGATCAATTGTTGTTGGGTTGGTTATACAACTCAATGACTCAAGATGTTGCTACTCAAGTGATGGTCTTTAAAAATTTTAAAGACCTCTGGGGTGCTGTGTCAGAGCTATATGGAGTCCAATCAAGAGCTAAAGAGGATTATCTAGTACAAATTTTTCAACAAACACGGAAAGGGTCGTTAAAAATGAAGATCCTCAATCACCTGGGCTGGGCTGAGCTGCAAGTTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGTACCAATTATTTCAACTTCGACAATCAACATGGCTAATACTCAAAATTCAGCCATCGGAAATCAGAAGAAAAACATGGGCAATCAAGGGATCAATGTGATTTTAGCAATTTCAATTCAAGAGGTGGACAAAGCCTTGGCGGGGGGTCATCTCGCCTCTGCACGAAGGAAAATTCATAAAGAAAATGAAGTGGCCATCTACCCTGTCGGCATCGACCTCCGTTTGCGACGGCTGAGCTCATTAATGGTGGTTTCCACAAACCACTCCATTCTCATCCTCGACATCTACGACATGAGCGGCATCGACAAAACCACTCTCTATAAAGCACTTTTCAACAAATACTTCCACTCCTTCCACTCCAGATCCTTCCTCCCCAACATCAACCACACTTCCACCGCCTCTTCGGACGACTTCCCCCACCTCCAGCAAACTCTCTTCTCCGATCTCCTCACTGTCTCCACCAAACTCCGCTCCTCCACCACCTCTGCAGTCGATGAAGTTTACGATGCAGAGTTCGATCCACTCGACGACGATGAGTCGCTCGAGCTCTTCACCTACCACGCCTTTTGGTAA MGLCSRRFGSRFWDSLFAGVRSRFTIAVGLGIVSRFDTVLRVSDQRRPCSSVGLVEAAKGSDDAETNQGQNPDYERWIAVDQLLLGWLYNSMTQDVATQVMVFKNFKDLWGAVSELYGVQSRAKEDYLVQIFQQTRKGSLKMKILNHLGWAELQVELLSFERHLEFQNSQKSGVPIISTSTINMANTQNSAIGNQKKNMGNQGINVILAISIQEVDKALAGGHLASARRKIHKENEVAIYPVGIDLRLRRLSSLMVVSTNHSILILDIYDMSGIDKTTLYKALFNKYFHSFHSRSFLPNINHTSTASSDDFPHLQQTLFSDLLTVSTKLRSSTTSAVDEVYDAEFDPLDDDESLELFTYHAFW Homology
BLAST of Lcy10g018840 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Lcy10g018840 vs. ExPASy TrEMBL
Match: A0A0A0LJJ7 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074250 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.1e-27 Identity = 87/187 (46.52%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.1e-27 Identity = 81/206 (39.32%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of Lcy10g018840 vs. ExPASy TrEMBL
Match: A0A5D3C8K6 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00200 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.1e-26 Identity = 84/187 (44.92%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. ExPASy TrEMBL
Match: A0A1S4DU12 (TMV resistance protein N OS=Cucumis melo OX=3656 GN=LOC103485886 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.1e-26 Identity = 84/187 (44.92%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.6e-22 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Lcy10g018840 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia]) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-26 Identity = 81/206 (39.32%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of Lcy10g018840 vs. NCBI nr
Match: XP_031737435.1 (TMV resistance protein N isoform X2 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-26 Identity = 87/187 (46.52%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. NCBI nr
Match: XP_031737434.1 (TMV resistance protein N isoform X1 [Cucumis sativus] >KGN61264.1 hypothetical protein Csa_006539 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-26 Identity = 87/187 (46.52%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. NCBI nr
Match: KAA0049884.1 (TMV resistance protein N-like [Cucumis melo var. makuwa] >TYK07622.1 TMV resistance protein N-like [Cucumis melo var. makuwa]) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-25 Identity = 84/187 (44.92%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. NCBI nr
Match: XP_016899476.1 (PREDICTED: TMV resistance protein N [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-25 Identity = 84/187 (44.92%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lcy10g018840 vs. TAIR 10
Match: AT5G36930.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 56.2 bits (134), Expect = 6.2e-08 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of Lcy10g018840 vs. TAIR 10
Match: AT5G36930.2 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 56.2 bits (134), Expect = 6.2e-08 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of Lcy10g018840 vs. TAIR 10
Match: AT1G27170.1 (transmembrane receptors;ATP binding ) HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06 Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Lcy10g018840 vs. TAIR 10
Match: AT1G27170.2 (transmembrane receptors;ATP binding ) HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06 Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Lcy10g018840 vs. TAIR 10
Match: AT1G27180.1 (disease resistance protein (TIR-NBS-LRR class), putative ) HSP 1 Score: 47.0 bits (110), Expect = 3.8e-05 Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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