Lcy10g018440 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAATCTAAGGTCCACACGCCCACTCCCTTTCTCTCCTCTCCGCCCCTTCCGCCTCCCTGCCCCCCTCCAGAAAGCGACTTATTCCTCCCCTCTTATTTAATCCCCCCCGCTCTTCCCTTCCCCATTTCATCCCACACATCCTCCACATGGACTACTCCGACCACCACTCCGTCTGCTGCCTCTGTGGCGACGTCGGTTTTCCCGCCAACCTCTTCCGCTGCTCCAACTGCTCCAACCGCTTCCAACACTCGTAAGAATTCCACTCACCAGGACTCTGTTTGATAATGTTCTTGTTTCTTGTTTATAGTCTCATCGTCTGCATTTGATAACAGTTATCAATTTTTTTTTTTCCTTTTTTTGGGCCGATTTGATTGATGGATGTTGAGTGATTGGTGCAGTTATTGCAGCAACTATTACGGGGAATCGGCGGAGGCAATTGAAGTGTGCGATTGGTGCAGGAGTGAACGGAGAAGTACGGGCCGCCGTGACTCTGCAAGGAAGTCCGTTGTCAACCATATGGATGGCGCCAAGTCCCAAAAGGGCTCCGGCGATCAACACAAAAGAGAGAGAAACTCCGGCGGAGTGCCGTCGCCGCGGCCTGCTCCACGCCGGTACAAGCTTCTCAAGGATGTTATGTGTTGAAACCCCGATGGGTTGGTTGTTCTGAATGGATTGTTAAAGATAAACAAGGCAACCCAAGAAGCAATAATGCTTTCAATTTTGATTTTCTTCACACACATATATATGTATACGTATGCGTACGTCGCTTGAAAATTAAATAAGCTACTTAATTTATTATTGGATGGCTCTCTGATTTATATTGAAGGTGTTTTCAATTATTTGAGCTTTCAATGCACTAATTTGCTCTTAGAAAAGATAAAAAGTTCATACCACATTGATGGGAAAATTTTTAGTAGGAGAAATTTTTCATACTACCTCTCCATTCATTGTTTGCTATGAATGAAGAATTGTTTGGGA AAAAAATCTAAGGTCCACACGCCCACTCCCTTTCTCTCCTCTCCGCCCCTTCCGCCTCCCTGCCCCCCTCCAGAAAGCGACTTATTCCTCCCCTCTTATTTAATCCCCCCCGCTCTTCCCTTCCCCATTTCATCCCACACATCCTCCACATGGACTACTCCGACCACCACTCCGTCTGCTGCCTCTGTGGCGACGTCGGTTTTCCCGCCAACCTCTTCCGCTGCTCCAACTGCTCCAACCGCTTCCAACACTCTTATTGCAGCAACTATTACGGGGAATCGGCGGAGGCAATTGAAGTGTGCGATTGGTGCAGGAGTGAACGGAGAAGTACGGGCCGCCGTGACTCTGCAAGGAAGTCCGTTGTCAACCATATGGATGGCGCCAAGTCCCAAAAGGGCTCCGGCGATCAACACAAAAGAGAGAGAAACTCCGGCGGAGTGCCGTCGCCGCGGCCTGCTCCACGCCGGTACAAGCTTCTCAAGGATGTTATGTGTTGAAACCCCGATGGGTTGGTTGTTCTGAATGGATTGTTAAAGATAAACAAGGCAACCCAAGAAGCAATAATGCTTTCAATTTTGATTTTCTTCACACACATATATATGTATACGTATGCGTACGTCGCTTGAAAATTAAATAAGCTACTTAATTTATTATTGGATGGCTCTCTGATTTATATTGAAGGTGTTTTCAATTATTTGAGCTTTCAATGCACTAATTTGCTCTTAGAAAAGATAAAAAGTTCATACCACATTGATGGGAAAATTTTTAGTAGGAGAAATTTTTCATACTACCTCTCCATTCATTGTTTGCTATGAATGAAGAATTGTTTGGGA ATGGACTACTCCGACCACCACTCCGTCTGCTGCCTCTGTGGCGACGTCGGTTTTCCCGCCAACCTCTTCCGCTGCTCCAACTGCTCCAACCGCTTCCAACACTCTTATTGCAGCAACTATTACGGGGAATCGGCGGAGGCAATTGAAGTGTGCGATTGGTGCAGGAGTGAACGGAGAAGTACGGGCCGCCGTGACTCTGCAAGGAAGTCCGTTGTCAACCATATGGATGGCGCCAAGTCCCAAAAGGGCTCCGGCGATCAACACAAAAGAGAGAGAAACTCCGGCGGAGTGCCGTCGCCGCGGCCTGCTCCACGCCGGTACAAGCTTCTCAAGGATGTTATGTGTTGA MDYSDHHSVCCLCGDVGFPANLFRCSNCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSTGRRDSARKSVVNHMDGAKSQKGSGDQHKRERNSGGVPSPRPAPRRYKLLKDVMC Homology
BLAST of Lcy10g018440 vs. ExPASy TrEMBL
Match: A0A6J1IH20 (uncharacterized protein LOC111472884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472884 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37 Identity = 83/107 (77.57%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Lcy10g018440 vs. ExPASy TrEMBL
Match: A0A6J1IAU2 (uncharacterized protein LOC111472884 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472884 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 6.0e-37 Identity = 84/107 (78.50%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Lcy10g018440 vs. ExPASy TrEMBL
Match: A0A5B6YSM7 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_004305 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.4e-31 Identity = 72/122 (59.02%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of Lcy10g018440 vs. ExPASy TrEMBL
Match: A0A1Q3D081 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29323 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.1e-29 Identity = 73/123 (59.35%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of Lcy10g018440 vs. ExPASy TrEMBL
Match: A0A2C9VTF1 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G050600 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.1e-29 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Lcy10g018440 vs. NCBI nr
Match: XP_022974249.1 (uncharacterized protein LOC111472884 isoform X1 [Cucurbita maxima]) HSP 1 Score: 164.5 bits (415), Expect = 5.5e-37 Identity = 83/107 (77.57%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Lcy10g018440 vs. NCBI nr
Match: XP_023540879.1 (uncharacterized protein LOC111801126 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 163.7 bits (413), Expect = 9.4e-37 Identity = 85/115 (73.91%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Lcy10g018440 vs. NCBI nr
Match: XP_022974251.1 (uncharacterized protein LOC111472884 isoform X2 [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36 Identity = 84/107 (78.50%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Lcy10g018440 vs. NCBI nr
Match: KAG6597027.1 (hypothetical protein SDJN03_10207, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36 Identity = 82/107 (76.64%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Lcy10g018440 vs. NCBI nr
Match: KAG7028505.1 (hypothetical protein SDJN02_09686, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36 Identity = 82/107 (76.64%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of Lcy10g018440 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24 Identity = 59/122 (48.36%), Postives = 73/122 (59.84%), Query Frame = 0
BLAST of Lcy10g018440 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 7.5e-24 Identity = 59/129 (45.74%), Postives = 72/129 (55.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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