Lcy10g013950 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g013950
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	actin-depolymerizing factor-like
Location	Chr10: 42131718 .. 42133480 (-)
RNA-Seq Expression	Lcy10g013950
Synteny	Lcy10g013950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGACTGGGAGCTCAGCCGAGAGTTTCAATGATTTTACTGCTTCATTACCTGAGATTGATTGTAGATATGCAGTTTATGACTACGATTTTGTGACTTCTGGGAACTGCCAAAAGAGCAAAGTCTTTTCCATTGCCTGGTTAGTTATTATAATAAATTTAAACAGTTTTTTTCCTGGTTAGTTCAGTAATTTGCCTTACAGTTTAGTTTTCTTCCTGTTCCTTTTATGCTGGATCTCAATTTCAACGTCTTTCTGTTTGTGTTAAACGAGTATTGCATTTATTTATTGGAGTTCCATTACTATATCTGCGAGATTCTGCTTTAATTTCATGTTTCTTAACTATTTCTTTATATCAAGCACCTTTCTTTATGTGTTGAATGTACACATTAGGTGCCATTTCTAACTTAGCTATCATGGCCAACAAGAGCATAGCTTAACTGGCATAAAGTTGTACTGATAATCACAAGGTCTGTGGTTCGAATCTCCCACCCCACATATTGTCAAAAAAAAAAAAAAAAAAAACTTAGCTATCATGAATTAAAAACATAAATGGCTTATGATATGAATGAAGGGTGGAAATTGTGGGGAGCTATCACATTCCTAATGTATTTGGTTGACTTTCTTTCTGATATGGTTTCATAAAATTGTTTCTTAACTATTTCATTATATTGAGCATCTTTCTTTCTGATTGAGGATTTTGGAAATTTATACAGAGGGTGGTTTTAACTTTTAATATCAGTTTGTTGTCAATTTGCTCCAATTAATTGGCCCGGTTGATTGTAATAGCACTACCATATTTTTGAGTTTCCGTCCTCTGCTGTGCTGTAGTACCAAACATCCATATCATGATCATTGATTCATAGCCATCTTTATTGCAATATTTTTGCAATGCAGTCTGGTTCTACAAGGCATTGGTAATTCCTGCCAGTCTTTCCCACTCTATCCTCTTTGCCAGTCTGTAGTTTTCACACCTGATTTCTTCTATTTTCTGGCCACTGGTAAAAACATTCAATGTTCAATATGGTCATTCTAGTTCTGCAGGCACATGAAATGTAGTGGTATGCAACTGTTTGATATAGTCTTCCTCGAGATGCTGATAGGCCTTGTCCAACAATTTTATTTATAATCACATGACAGGGTAACGAGGGAAGATTAGAGAGCTTCCTGCCTCTCCCAATTCTCATCAGAGAATATTACAAAATAGTTTAGCAAAAGGATACCCTTCCCAAGCAAACAAACAACTCTATATTCCCTACTCTCCACGGCCCTTTCCAACTAACAGAATACTCTGGCCCACCACACACAAACATTCTTTTCTCACACACCCACACCCCTCCTTACTTGCTTATGTGTTTATACTTCTGTAATTGGTGGCTCTCAGATGATTAATTGAGCCTAAAGCTCTCTCAAAGAACTCAAAGGAAATCTTTATTAAGTTCACAAAATATAGAGAATAAGTACACCAACTAAAAGCATTTAACTAAAATGAAATTACAAAATTATCACAAAATATAGAGAATCTTTAGTTAATGTTCACAAAATATAGAGAATAAGTACACTAACTAAAATGAAATTAAAAAATTATCCTACTATTCCCTACATCAATGATCTACTTCAGTTCTTACAAGTAACTCTTTTTACAGGTCTCCATCTGTGTCCAGGATCTGTTCCAAGATACTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAAACCATTACGAGATACAGGCGGTTAGACCCAACTGA

mRNA sequence

ATGGAAAAGACTGGGAGCTCAGCCGAGAGTTTCAATGATTTTACTGCTTCATTACCTGAGATTGATTGTAGATATGCAGTTTATGACTACGATTTTGTGACTTCTGGGAACTGCCAAAAGAGCAAAGTCTTTTCCATTGCCTGGTCTCCATCTGTGTCCAGGATCTGTTCCAAGATACTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAAACCATTACGAGATACAGGCGGTTAGACCCAACTGA

Coding sequence (CDS)

ATGGAAAAGACTGGGAGCTCAGCCGAGAGTTTCAATGATTTTACTGCTTCATTACCTGAGATTGATTGTAGATATGCAGTTTATGACTACGATTTTGTGACTTCTGGGAACTGCCAAAAGAGCAAAGTCTTTTCCATTGCCTGGTCTCCATCTGTGTCCAGGATCTGTTCCAAGATACTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAAACCATTACGAGATACAGGCGGTTAGACCCAACTGA

Protein sequence

MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKILYATSKDRFRRELEGNHYEIQAVRPN

Homology

[Close]

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot
Match: Q2QLT8 (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-31
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTGSS ESF+DF  SLPE DCRYA+YD+DFVT  NCQKSK+F +AWSPSVSRI +K+L
Sbjct: 49  VEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKML 108

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YATSK+RFRREL+G HYEIQA  P+
Sbjct: 109 YATSKERFRRELDGVHYEIQATDPS 133

[Close]

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.0e-30
Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AESF++F A+LPE DCRYAVYD+DFVTS NCQKSK+F IAWSP  SRI +K+L
Sbjct: 47  VEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSK+RFRREL+G HYEIQA  P
Sbjct: 107 YATSKERFRRELDGVHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot
Match: Q9AY76 (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.0e-28
Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG++ ES++DF ASLPE DCRYA+YD+DFVT  N QKSK+F IAWSPS SRI +K+L
Sbjct: 49  VEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKML 108

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           Y+TSKDR ++EL+G HYEIQA  P
Sbjct: 109 YSTSKDRIKQELDGFHYEIQATDP 132

[Close]

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.0e-28
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG+  ES++DF ASLP+ DCRYAVYD+DFVTS NCQKSK+F  AWSPS S I +K+L
Sbjct: 50  VEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVL 109

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           Y+TSKD+  REL+G HYEIQA  P
Sbjct: 110 YSTSKDQLSRELQGIHYEIQATDP 133

[Close]

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot
Match: Q337A5 (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-26
Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG+  ES++DFTASLP  DCRYAVYD DFV+  NC+KSK+F I+WSPSVSRI +K +
Sbjct: 53  VEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTI 112

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YA S+++FR EL+G H+EIQA  P+
Sbjct: 113 YAVSRNQFRHELDGVHFEIQATDPD 137

[Close]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL
Match: A0A6A2XU91 (Actin-depolymerizing factor 6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112159pilonHSYRG00397 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  +ES+NDFTASLPE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI SK+L
Sbjct: 52  VEKTGDPSESYNDFTASLPEADCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRSKML 111

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           Y+TSKDRFRREL+G HYEIQA  P
Sbjct: 112 YSTSKDRFRRELQGIHYEIQATDP 135

[Close]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL
Match: A0A6J1AYV0 (actin-depolymerizing factor-like OS=Herrania umbratica OX=108875 GN=LOC110422116 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTAS+PE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI SK+L
Sbjct: 47  VEKTGGPAESYDDFTASMPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRSKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL
Match: A0A061EMY3 (Actin depolymerizing factor 6 OS=Theobroma cacao OX=3641 GN=TCM_020887 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTAS+PE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI SK+L
Sbjct: 47  VEKTGGPAESYDDFTASMPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRSKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL
Match: A0A7J7HCI0 (ADF-H domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_012646 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTASLPE DCRYAVYDYDFVTS NCQKSK+F IAWSP+VSRI +K+L
Sbjct: 47  VEKTGGPAESYDDFTASLPENDCRYAVYDYDFVTSENCQKSKIFFIAWSPAVSRIRAKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL
Match: A0A4S4DW33 (ADF-H domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_022966 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTASLPE DCRYAVYDYDFVTS NCQKSK+F IAWSP+VSRI +K+L
Sbjct: 57  VEKTGGPAESYDDFTASLPENDCRYAVYDYDFVTSENCQKSKIFFIAWSPAVSRIRAKML 116

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 117 YATSKDRFRRELEGIHYEIQATDP 140

[Close]

BLAST of Lcy10g013950 vs. NCBI nr
Match: XP_007035112.1 (PREDICTED: actin-depolymerizing factor [Theobroma cacao] >EOY06038.1 Actin depolymerizing factor 6 [Theobroma cacao])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTAS+PE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI SK+L
Sbjct: 47  VEKTGGPAESYDDFTASMPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRSKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. NCBI nr
Match: KAE8670395.1 (Actin-depolymerizing factor 6 [Hibiscus syriacus])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  +ES+NDFTASLPE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI SK+L
Sbjct: 52  VEKTGDPSESYNDFTASLPEADCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRSKML 111

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           Y+TSKDRFRREL+G HYEIQA  P
Sbjct: 112 YSTSKDRFRRELQGIHYEIQATDP 135

[Close]

BLAST of Lcy10g013950 vs. NCBI nr
Match: THG07562.1 (hypothetical protein TEA_022966 [Camellia sinensis var. sinensis])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTASLPE DCRYAVYDYDFVTS NCQKSK+F IAWSP+VSRI +K+L
Sbjct: 57  VEKTGGPAESYDDFTASLPENDCRYAVYDYDFVTSENCQKSKIFFIAWSPAVSRIRAKML 116

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 117 YATSKDRFRRELEGIHYEIQATDP 140

[Close]

BLAST of Lcy10g013950 vs. NCBI nr
Match: XP_022721812.1 (actin-depolymerizing factor-like [Durio zibethinus])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AES++DFTASLPE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI +K+L
Sbjct: 47  VEKTGGQAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKDRFRRELEG HYEIQA  P
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDP 130

[Close]

BLAST of Lcy10g013950 vs. NCBI nr
Match: PON98680.1 (ADF/Cofilin/Destrin [Trema orientale])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG  AESF+DF ASLPE DCRYAVYD+DFVTS NCQKSK+F IAWSPSVSRI +K+L
Sbjct: 47  VEKTGGPAESFDDFAASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRISAKML 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YATSKDRFRRELEG HYEIQA  P+
Sbjct: 107 YATSKDRFRRELEGIHYEIQATDPS 131

[Close]

BLAST of Lcy10g013950 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 124.0 bits (310), Expect = 5.7e-29
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EKTG+  ES++DF ASLP+ DCRYAVYD+DFVTS NCQKSK+F  AWSPS S I +K+L
Sbjct: 50  VEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVL 109

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           Y+TSKD+  REL+G HYEIQA  P
Sbjct: 110 YSTSKDQLSRELQGIHYEIQATDP 133

[Close]

BLAST of Lcy10g013950 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 117.5 bits (293), Expect = 5.3e-27
Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EK G+  E+++DFT+S+P+ +CRYAVYD+DF T  NCQKSK+F IAWSP  SR+ SK+L
Sbjct: 43  IEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKML 102

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YA+SKDRF+RE+EG   E+QA  P+
Sbjct: 103 YASSKDRFKREMEGIQVELQATDPS 127

[Close]

BLAST of Lcy10g013950 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 116.7 bits (291), Expect = 9.1e-27
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           ++K G+  E++ DFT S+PE +CRYAVYDYDF T  NCQKSK+F IAWSP  SR+ SK+L
Sbjct: 43  IDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKML 102

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YA+SKDRF+REL+G   E+QA  P+
Sbjct: 103 YASSKDRFKRELDGIQVELQATDPS 127

[Close]

BLAST of Lcy10g013950 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-25
Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           +EK G+  E+++DFTASLP  +CRYAV+D+DF+T  NCQKSK+F IAWSP  SR+  K++
Sbjct: 41  VEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMV 100

Query: 61  YATSKDRFRRELEGNHYEIQAVRPN 86
           YA+SKDRF+REL+G   E+QA  P+
Sbjct: 101 YASSKDRFKRELDGIQVELQATDPS 125

[Close]

BLAST of Lcy10g013950 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-25
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 1   MEKTGSSAESFNDFTASLPEIDCRYAVYDYDFVTSGNCQKSKVFSIAWSPSVSRICSKIL 60
           ++K G + ES++D   SLP  DCRYAV+D+DFVT  NC+KSK+F IAWSP  S+I +KIL
Sbjct: 47  VDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKIL 106

Query: 61  YATSKDRFRRELEGNHYEIQAVRP 85
           YATSKD  RR LEG HYE+QA  P
Sbjct: 107 YATSKDGLRRVLEGIHYELQATDP 130

The following BLAST results are available for this feature:

BLAST of Lcy10g013950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QLT8	1.6e-31	74.12	Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11...	[more]
Q8SAG3	3.0e-30	73.81	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9AY76	8.0e-28	67.86	Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 P...	[more]
Q9ZSK2	8.0e-28	67.86	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]
Q337A5	2.0e-26	63.53	Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10...	[more]

BLAST of Lcy10g013950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A2XU91	8.1e-31	79.76	Actin-depolymerizing factor 6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0011215...	[more]
A0A6J1AYV0	8.1e-31	80.95	actin-depolymerizing factor-like OS=Herrania umbratica OX=108875 GN=LOC110422116...	[more]
A0A061EMY3	8.1e-31	80.95	Actin depolymerizing factor 6 OS=Theobroma cacao OX=3641 GN=TCM_020887 PE=3 SV=1	[more]
A0A7J7HCI0	8.1e-31	80.95	ADF-H domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_012646 PE=...	[more]
A0A4S4DW33	8.1e-31	80.95	ADF-H domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=...	[more]

BLAST of Lcy10g013950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_007035112.1	1.7e-30	80.95	PREDICTED: actin-depolymerizing factor [Theobroma cacao] >EOY06038.1 Actin depol...	[more]
KAE8670395.1	1.7e-30	79.76	Actin-depolymerizing factor 6 [Hibiscus syriacus]	[more]
THG07562.1	1.7e-30	80.95	hypothetical protein TEA_022966 [Camellia sinensis var. sinensis]	[more]
XP_022721812.1	1.7e-30	80.95	actin-depolymerizing factor-like [Durio zibethinus]	[more]
PON98680.1	1.7e-30	80.00	ADF/Cofilin/Destrin [Trema orientale]	[more]

BLAST of Lcy10g013950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31200.1	5.7e-29	67.86	actin depolymerizing factor 6	[more]
AT4G00680.1	5.3e-27	60.00	actin depolymerizing factor 8	[more]
AT1G01750.1	9.1e-27	61.18	actin depolymerizing factor 11	[more]
AT4G25590.1	1.3e-25	58.82	actin depolymerizing factor 7	[more]
AT2G16700.1	2.2e-25	61.90	actin depolymerizing factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 2..83 e-value: 1.8E-4 score: 29.5
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 2..81 e-value: 9.7E-19 score: 67.4
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 1..85 score: 23.376974
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..85 e-value: 1.9E-24 score: 87.9
None	No IPR available	PANTHER	PTHR11913:SF20	ACTIN-DEPOLYMERIZING FACTOR 11	coord: 2..84
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 7..81
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 2..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g013950.1	Lcy10g013950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding