Lcy10g011780 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g011780
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CASP-like protein
Location	Chr10: 40030234 .. 40032309 (-)
RNA-Seq Expression	Lcy10g011780
Synteny	Lcy10g011780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACACTTTCCCATCATCCAAACACTCCTCTTATCCCTCTCATACCATTTATATATATATATATATATATACACATAAATAGCCAAAGAATTTAGTGAAGAGAGAAATAGAAGAATATGTCAATGAGTGGTGTTGGGAAGTTAGAAGTGATTCTTAGGGTTTTGGGAATTGTGTTGAGTTTTGTGGCAGCCATTGTCATGGGAGTTGGCAAAGAAACTAAGGTGGTTCCTATTACTCTCTCTCCCAACCTTCCTCCTTTGGACTTTGTTGCGGTCGCTAAGTGGCATTACTTGTCCGCTTTCGTGTAAGCCTCTTGCTTCTCTTCTCTGGATTCATAGTGATTTTGCTTGCTTTTGAGTGATCAGTTTGTGATGTCTTCTGAGAAAAACATTTTCAATGTGATGGTTTTTTTGTAATATTGATTAGTGGTTGATTTGTGGTTTTTATTATTTGAGTCGTTTTAAATTTGGATGGATTTCAATTTTTGGTTGTTTTTCATTTTTAAAAGGTATTTTTCAAGGCTAAAATGGTTAGGTCGTTTCTCCTAAGTTTAAGATAGATTACTTATTTAATACTTGTCGTATTTTAAATTTCGATCATTAAATCAAGATTTAAAGACTATATTGGTAAAGTTCTCATTTTTCTTTTCCTTCCTAATGGCGGACATTTAAACAAAAAGGAATGATAATATTTGTTTCAAATCTCTCTCATTCCAAATAGGATAAAAAACTTAAAATCGTTTTTAATATTTCAAATAATGAGATTTAATATCATTTTATAAACTTTCTTGATTTAAAATGAGGGAGCAACTATAAGATTTTGAAGAAGTAATTTTAATTAGTTAAAAAGTATTTTTTTACTCTTTCGTCAAATCTCATTCCAACACCTCTAATTCTTGTAATTGTAGTGTATCTTTCTGCCTCATTATATTGATTTTTTTTTTCCTTCGAGATGATGGTTTTGTATTCTAAATAACCCTTTGTTTGGAACCCTAGATTTGGGAGGATTTGAAATCATAACTGATTTGAAATCTTTTTGGGATGAGCAAAAAAGTAAAGGATTTGAAATCGGTCGTGATTTCAAATCGTGTTTTCTTTAACAAAATTTTTCACTCCAAAATGGTCGGATTTTGCAGGATTATTTCAAACTTAAAAAATTATGTTTCCAATTTTACCCATAATTTTTTTTTGTTTTCTTAATTTATGACTCCTACTATAGTTGACTCAACTACCAATTTGTTTTTTTTTTCTTCTTTTTATATATTGATTCTTTTTTTTTTTGCTCCATCTATATGTATACTTTTTTTTCTTTTTTATGTTTTCATACACTAGTTAGAGAAGAAATCAATAAAAAAAAAAAGTTTCCTGCAAAATTATAAGAGGCATAATAGTAAAATGTTATACTTTCTTTTCATTTCTCGTGAGCATCCAAACCTGATATTTTAATTTTAGTAATTTCGAATTATTTTGGTTCCAAACACAAATAGAAATTTAAAATCATTTCCATCTTTTAAAATCTTGGAATTTAAAATCATTTCCTCCAAAATTCATTCGCCAAACTAAGCGTAAAAGTACCATATTTTCTTTTCAGATACCTTTTCGCCACAAATGTAATAGCAAGTTCATATGGATTATTCTCGTTGATGATAACATTAACAAACAAAAATCGGAGTAATATATTAGCTCTACTGATCATTGTTCTCGACACCGTGATGGTGGCGCTGCTCTCCTCCGGCACCGGAGCCGCCATGGCCGTCGGAATTATTGGCTACCGGGGTAACTCGCACGTGCGATGGAACAAAGTATGTGATACATTCGGTAGATTTTGCAAGCAAGTGGTCGCTTCTACCATCGCGTCCCTTACCGGAGCCGTTGTATTTATGTTGTTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAAATGGGCTTTTGGGCTTTCATTTTTTTAAAAAAATAATTATGGGCTAAAGCACAGTGTTCTTGTTTTATTTATTTATTTATATTTTTTTGAGTTCAAAAGCACAGCTATTTAGGGGTATTTCCATATATGTGTACTAAATAATTAC

mRNA sequence

CCCACACTTTCCCATCATCCAAACACTCCTCTTATCCCTCTCATACCATTTATATATATATATATATATATACACATAAATAGCCAAAGAATTTAGTGAAGAGAGAAATAGAAGAATATGTCAATGAGTGGTGTTGGGAAGTTAGAAGTGATTCTTAGGGTTTTGGGAATTGTGTTGAGTTTTGTGGCAGCCATTGTCATGGGAGTTGGCAAAGAAACTAAGGTGGTTCCTATTACTCTCTCTCCCAACCTTCCTCCTTTGGACTTTGTTGCGGTCGCTAAGTGGCATTACTTGTCCGCTTTCGTATACCTTTTCGCCACAAATGTAATAGCAAGTTCATATGGATTATTCTCGTTGATGATAACATTAACAAACAAAAATCGGAGTAATATATTAGCTCTACTGATCATTGTTCTCGACACCGTGATGGTGGCGCTGCTCTCCTCCGGCACCGGAGCCGCCATGGCCGTCGGAATTATTGGCTACCGGGGTAACTCGCACGTGCGATGGAACAAAGTATGTGATACATTCGGTAGATTTTGCAAGCAAGTGGTCGCTTCTACCATCGCGTCCCTTACCGGAGCCGTTGTATTTATGTTGTTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAAATGGGCTTTTGGGCTTTCATTTTTTTAAAAAAATAATTATGGGCTAAAGCACAGTGTTCTTGTTTTATTTATTTATTTATATTTTTTTGAGTTCAAAAGCACAGCTATTTAGGGGTATTTCCATATATGTGTACTAAATAATTAC

Coding sequence (CDS)

ATGTCAATGAGTGGTGTTGGGAAGTTAGAAGTGATTCTTAGGGTTTTGGGAATTGTGTTGAGTTTTGTGGCAGCCATTGTCATGGGAGTTGGCAAAGAAACTAAGGTGGTTCCTATTACTCTCTCTCCCAACCTTCCTCCTTTGGACTTTGTTGCGGTCGCTAAGTGGCATTACTTGTCCGCTTTCGTATACCTTTTCGCCACAAATGTAATAGCAAGTTCATATGGATTATTCTCGTTGATGATAACATTAACAAACAAAAATCGGAGTAATATATTAGCTCTACTGATCATTGTTCTCGACACCGTGATGGTGGCGCTGCTCTCCTCCGGCACCGGAGCCGCCATGGCCGTCGGAATTATTGGCTACCGGGGTAACTCGCACGTGCGATGGAACAAAGTATGTGATACATTCGGTAGATTTTGCAAGCAAGTGGTCGCTTCTACCATCGCGTCCCTTACCGGAGCCGTTGTATTTATGTTGTTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAA

Protein sequence

MSMSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK

Homology

[Close]

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-41
Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 6   VGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYL 65
           VG  +++LR+L   ++ VAAIV+ V K+TK+VPI LS + PPL+    AKWH +SAFVY 
Sbjct: 20  VGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYF 79

Query: 66  FATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRG 125
             TN IA +Y   SL++ L N+ +S  L  LI VLDT MVALL SG GAA AVGI+GY+G
Sbjct: 80  LVTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKG 139

Query: 126 NSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKR 174
           NSHV WNKVC+ FG+FC Q+ AS   SL G++ F+LLV++ VV L +R
Sbjct: 140 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHRR 187

[Close]

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.6e-41
Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 6   VGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYL 65
           VG  +++LR+L   ++ VAAIV+ V K+TKVVPI LS +LPPLD    AKWH +SA VY 
Sbjct: 19  VGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYF 78

Query: 66  FATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRG 125
             TN IA +Y + SL++ L N+ +S  L  LI VLD  MVALL SG GAA AVG++GY+G
Sbjct: 79  LVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKG 138

Query: 126 NSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKR 174
           NSHV WNKVC+ FG+FC Q+ AS   SL G++ F+LLVI+  V L +R
Sbjct: 139 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHRR 186

[Close]

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-37
Identity = 85/171 (49.71%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 5   GVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVY 64
           G    +++LRVL +VL+  AAIV+GV K+TKVVPI +   LP ++    AKWHYLSAF Y
Sbjct: 26  GASTCDLLLRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTY 85

Query: 65  LFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYR 124
             A+N IA SY   SL++ ++ K     +  ++IVLD +MVA+L S  GAA+A+G++GY+
Sbjct: 86  SVASNAIACSYAALSLVLAVSGKKG---IMSIVIVLDLLMVAMLFSSNGAALAIGLMGYQ 145

Query: 125 GNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           GNSHVRW KVC  FGRFC QV  S   SL G+++F+LLV +  + L K+ K
Sbjct: 146 GNSHVRWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

[Close]

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-37
Identity = 84/165 (50.91%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 11  VILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFATNV 70
           ++LRVL  VL+  AAIV GV  +T+ VPI L+ ++PPL    VAKWHYLSAFV+   +N 
Sbjct: 31  LVLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNA 90

Query: 71  IASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRGNSHVR 130
           IA SY   S+M++   K     +  +I+ LD +MVALL S  GAA A+G++GY+GNSHV+
Sbjct: 91  IACSYAAISVMLSFCGKKS---MVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVK 150

Query: 131 WNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           WNKVC+ FG+FC QV AS + SL G++VF+LLV+L    L  + K
Sbjct: 151 WNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

[Close]

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 85/170 (50.00%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 7   GKL---EVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFV 66
           GKL   +++LRV+ + L+ VAA+++GV K+TKVV + L P LPP+D    AKW YLSAFV
Sbjct: 25  GKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFV 84

Query: 67  YLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGY 126
           Y   +N IA SY   SL++++ N   +  L L I V+D VMVALL S  GAA A+G++GY
Sbjct: 85  YFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGY 144

Query: 127 RGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKR 174
            GNS VRW KVC+ FG+FC QV  +   S  G + F LLV++A   L KR
Sbjct: 145 EGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

[Close]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL
Match: A0A0A0L8Y1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLEVILRVLG +LS VAAIVMGV KETKVVPIT+S NLPP   V VAKWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRS-NILALLIIVLDTVMVALLSSGTGAAMAVGII 122
           VYL ATNVIASSYGL SLM+TL+NKNRS N+L LLIIVLDTV VALLSSGTGAA+A+G++
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 123 GYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           GY GNSHV WNKVCDTFGRFCKQV AS + SL GA+VF+LL+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

[Close]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL
Match: A0A5A7U2H8 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00470 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 133/174 (76.44%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLEVILRVLG +LS VAAIV+GV KETKVVP+T+S NLPP   V VAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRS-NILALLIIVLDTVMVALLSSGTGAAMAVGII 122
           VY FATNVIAS YGL SLM+TL+NKN S N+L LL+IVLDTV VALLSSG GAAMA+G+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 123 GYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
            Y GNSHVRWNKVCD FG+FCKQV AS + SL GA+VF+LLVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL
Match: A0A1S3AXE2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 133/174 (76.44%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLEVILRVLG +LS VAAIV+GV KETKVVP+T+S NLPP   V VAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRS-NILALLIIVLDTVMVALLSSGTGAAMAVGII 122
           VY FATNVIAS YGL SLM+TL+NKN S N+L LL+IVLDTV VALLSSG GAAMA+G+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 123 GYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
            Y GNSHVRWNKVCD FG+FCKQV AS + SL GA+VF+LLVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL
Match: A0A6J1G003 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.1e-61
Identity = 132/173 (76.30%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLE +LRVLG VL+ VAAIV+ + KETKVVP ++SPNLP  D V VAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIG 122
           VYLFA NVIAS YGL +L I+L NKNRSNILALLI +LD VMV LLSS  GAA+A+GIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 123 YRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           Y GNSHVRWNKVCDTFGRFCKQV A++  SL GA+VFMLLVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL
Match: A0A6J1IKK8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.9e-59
Identity = 129/173 (74.57%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLE +LRVLG VL+ VAAIV+ + KE KVVP ++SPNLP  D V VAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIG 122
           VYLFA NVIAS +GL SL I+L NKNRS++LALLI +LD VMV LLSS  GAA+A+GIIG
Sbjct: 61  VYLFAANVIASLHGLLSLTISLANKNRSDVLALLITILDIVMVVLLSSSGGAAIAIGIIG 120

Query: 123 YRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           Y GNSHVRWNKVCDTFGRFCKQV A++  SL GA VFMLLVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGATVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lcy10g011780 vs. NCBI nr
Match: XP_004134189.1 (CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009555 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63
Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLEVILRVLG +LS VAAIVMGV KETKVVPIT+S NLPP   V VAKWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRS-NILALLIIVLDTVMVALLSSGTGAAMAVGII 122
           VYL ATNVIASSYGL SLM+TL+NKNRS N+L LLIIVLDTV VALLSSGTGAA+A+G++
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 123 GYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           GY GNSHV WNKVCDTFGRFCKQV AS + SL GA+VF+LL+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

[Close]

BLAST of Lcy10g011780 vs. NCBI nr
Match: XP_008438806.1 (PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein 1E1 [Cucumis melo var. makuwa] >TYK16123.1 CASP-like protein 1E1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-61
Identity = 133/174 (76.44%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLEVILRVLG +LS VAAIV+GV KETKVVP+T+S NLPP   V VAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRS-NILALLIIVLDTVMVALLSSGTGAAMAVGII 122
           VY FATNVIAS YGL SLM+TL+NKN S N+L LL+IVLDTV VALLSSG GAAMA+G+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 123 GYRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
            Y GNSHVRWNKVCD FG+FCKQV AS + SL GA+VF+LLVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Lcy10g011780 vs. NCBI nr
Match: XP_022945099.1 (CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like protein 1E2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 244.6 bits (623), Expect = 6.4e-61
Identity = 132/173 (76.30%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLE +LRVLG VL+ VAAIV+ + KETKVVP ++SPNLP  D V VAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIG 122
           VYLFA NVIAS YGL +L I+L NKNRSNILALLI +LD VMV LLSS  GAA+A+GIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 123 YRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           Y GNSHVRWNKVCDTFGRFCKQV A++  SL GA+VFMLLVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lcy10g011780 vs. NCBI nr
Match: XP_023540313.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60
Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLE +LRVLG  L+ VAAIV+ + KETKVVP ++SPNLP  D V VAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIG 122
           VYLFA NVIAS YGL SL I+L NKNRSNILALLI +LD VMV LLSS  GAA+A+GIIG
Sbjct: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 123 YRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           Y GNSHVRWNKVCDTFGRFCKQV A++  SL GA+VFMLLVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lcy10g011780 vs. NCBI nr
Match: KAG6597497.1 (CASP-like protein 1E2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 131/173 (75.72%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 3   MSGVGKLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAF 62
           MSG GKLE +LRVLG VL+ VAAIV+ + KETKVVP ++SPNLP  D V VAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 63  VYLFATNVIASSYGLFSLMITLTNKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIG 122
           VYLFA NVIAS YGL +L I+L NKNRSNI ALLI +LD VMV LLSS  GAA+A+GIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNISALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 123 YRGNSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRPK 176
           Y GNSHVRWNKVCDTFGRFCKQV A++  SL GA+VFMLLVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lcy10g011780 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 141.7 bits (356), Expect = 5.4e-34
Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 0


Query: 9   LEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFAT 68
           LE+ +RVL +VL+ VAA V+GV K+TKVVPI L P LPPL+    AK  YLSAFVY  + 
Sbjct: 27  LELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISA 86

Query: 69  NVIASSYGLFSLMITLTNK-NRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRGNS 128
           N IA  Y   S++I + +K  RS  L + +++ D +MVALL S TGAA A+G++G  GN 
Sbjct: 87  NAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNK 146

Query: 129 HVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGL 171
           HV W KVC  FG+FC Q   S   +L  +VVFMLLV+L  + L
Sbjct: 147 HVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of Lcy10g011780 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 138.3 bits (347), Expect = 6.0e-33
Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 9   LEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFAT 68
           +E+ +RVL ++L+  AA V+GV K+TKVV I L P LPPLD    AK  YLSAFVY  + 
Sbjct: 27  VELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISV 86

Query: 69  NVIASSYGLFSLMITLTNKNRSNILALLIIVL-DTVMVALLSSGTGAAMAVGIIGYRGNS 128
           N IA  Y   S+ I + ++ R +   L++++L D VMVALL SGTGAA A+G++G  GN 
Sbjct: 87  NAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNK 146

Query: 129 HVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGL 171
           HV W KVC  FG+FC +   S   +L  AVVFM LV+L  + L
Sbjct: 147 HVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of Lcy10g011780 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-14
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 8   KLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFA 67
           KL + LR+   + +  AAIVM + KETK + +  +    P+     AK+ +  AFV+   
Sbjct: 17  KLLLGLRIFAFMATLAAAIVMSLNKETKTL-VVATIGTVPIKATLTAKFQHTPAFVFFVI 76

Query: 68  TNVIASSYGLFSLMITLTNK--NRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRG 127
            NV+ S + L  +++ + ++      +  L I +LD +   L+S+   AA+ V  +G  G
Sbjct: 77  ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNG 136

Query: 128 NSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAV 168
           N H +WNKVCD F  +C     + IA+  G ++ +L+  +++
Sbjct: 137 NKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSI 177

[Close]

BLAST of Lcy10g011780 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13
Identity = 50/167 (29.94%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 10  EVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFATN 69
           +V+LR +    +  + +VM   K+TK + +  +P   P      A++    A +Y     
Sbjct: 30  QVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIP-----AAEFTNSPALIYFVVAL 89

Query: 70  VIASSYGLFSLMITLT---NKNRSNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRGN 129
            +A  Y + S  +T++     + S +L L + ++D VMV +++S TGA   V  +G +GN
Sbjct: 90  SVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGN 149

Query: 130 SHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKR 174
             VRW K+C  + +FC+ V  +   SL  +VV +LL I++V+ L K+
Sbjct: 150 KEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKK 191

[Close]

BLAST of Lcy10g011780 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 8   KLEVILRVLGIVLSFVAAIVMGVGKETKVVPITLSPNLPPLDFVAVAKWHYLSAFVYLFA 67
           K+ + LR+L    +  AAIVMG+ KETK   +    N  P+     AK+ +  AFV+   
Sbjct: 17  KILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGN-TPIQATFTAKFDHTPAFVFFVV 76

Query: 68  TNVIASSYGLFSLMITLTNKNR--SNILALLIIVLDTVMVALLSSGTGAAMAVGIIGYRG 127
            N + S + L  + + +       +    L + +LD + V L+S+   AA  +  +G  G
Sbjct: 77  ANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNG 136

Query: 128 NSHVRWNKVCDTFGRFCKQVVASTIASLTGAVVFMLLVILAVVGLQKRP 175
           N H RW+K+CD F  +C     + IA+  G V+ ML++  A +    +P
Sbjct: 137 NKHARWDKICDRFATYCDHGAGALIAAFAG-VILMLIISAASISRLVQP 183

The following BLAST results are available for this feature:

BLAST of Lcy10g011780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TBD0	2.0e-41	54.76	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6SZP8	7.6e-41	54.76	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9HMP6	3.0e-37	49.71	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]
B9RT04	3.0e-37	50.91	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]
A7NW78	1.1e-36	50.00	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]

BLAST of Lcy10g011780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Y1	1.9e-63	78.74	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1	[more]
A0A5A7U2H8	1.4e-61	76.44	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXE2	1.4e-61	76.44	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1	[more]
A0A6J1G003	3.1e-61	76.30	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1	[more]
A0A6J1IKK8	2.9e-59	74.57	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1	[more]

BLAST of Lcy10g011780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134189.1	4.0e-63	78.74	CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009...	[more]
XP_008438806.1	2.9e-61	76.44	PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein ...	[more]
XP_022945099.1	6.4e-61	76.30	CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like ...	[more]
XP_023540313.1	1.4e-60	76.30	CASP-like protein 1E2 [Cucurbita pepo subsp. pepo]	[more]
KAG6597497.1	2.4e-60	75.72	CASP-like protein 1E2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy10g011780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	5.4e-34	50.92	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	6.0e-33	49.08	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	3.7e-14	29.63	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	1.8e-13	29.94	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.2e-12	30.18	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..157 e-value: 3.2E-36 score: 124.4
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..168 e-value: 3.9E-41 score: 138.4
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 8..173
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 8..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g011780.1	Lcy10g011780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding