Lcy10g011310 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTCTCTTTCTTTCTTTCTTTCTTCTTCTTCACATGGGCATCGGCGACTGGTGACCGACGACAATCGCTCGCCAGCGGTCAGGCGCCAACAACGATTTTTTTTCTCCTTCTCTTCCCTTCTTTTCTTTCTTTTTCTTTTTTTTCATCTTCTTCTCCGACGAAGCAGCACACACATCCCCACGTGCTAGCAAGGAAAAACCCAGGTCTACAACGCCCACGTTGTCCCTCACCGTCGATTTTCTCCTTCCCTCTTGCTCGTGCTGGTTGCCGAAAACAAGAAACCCACAAGAAAACGCGAACACAGTCGTCCCGGCGAGATCCGCAAACACAGTTGAAGAGCAACTGAAACAAGCGTGCCCTTGGAATGTTGACCCAAGCATGGTCGTGCAGCTAGATCCAACAACTTCGAACACGTTCGACAAAGTGTATTACCGGAATCTGATGGACAACAAAGGGTTGTTCAGATCAGACGAGGTTCTGTTCACGAGCTCGGCGTTGAAGGCGATAGTGGTGGGGTTTGCGAACAACGGAGGGCAGTTAAATGCGGCGTTTTGTGGTGGCGATGAGAAAGCTGGGGAGAGTCGTTGAGTTGGTTACTAGATACGAAACAAGTTTTCCCTTTCGTTCGGGCTGGATTTGAAGGGGAAATCCGTTTTTTTTTTTTAAAAAAAAAAGCCAGTGAAACGGTCGGAGGTGAGAGAAAGAGAGGGACGGTGAGAGAAGGAGATGGTGAGGGAAAGAGAAAGAGAAAGAAAGAAGAAAAAAAGAGGAAAAAAATCTCCGATGGCGGCGACTAGAGCTTTGGTGGGAGTGTTGAAGAAGAAGAAGGAGGTTGATGAGGGTGTTGAAGAAGAAGAAAGAAAAAAGAAATAAAAATATATTTATA ATTCTCTCTCTTTCTTTCTTTCTTTCTTCTTCTTCACATGGGCATCGGCGACTGGTGACCGACGACAATCGCTCGCCAGCGGTCAGGCGCCAACAACGATTTTTTTTCTCCTTCTCTTCCCTTCTTTTCTTTCTTTTTCTTTTTTTTCATCTTCTTCTCCGACGAAGCAGCACACACATCCCCACGTGCTAGCAAGGAAAAACCCAGGTCTACAACGCCCACGTTGTCCCTCACCGTCGATTTTCTCCTTCCCTCTTGCTCGTGCTGGTTGCCGAAAACAAGAAACCCACAAGAAAACGCGAACACAGTCGTCCCGGCGAGATCCGCAAACACAGTTGAAGAGCAACTGAAACAAGCGTGCCCTTGGAATGTTGACCCAAGCATGGTCGTGCAGCTAGATCCAACAACTTCGAACACGTTCGACAAAGTGTATTACCGGAATCTGATGGACAACAAAGGGTTGTTCAGATCAGACGAGGTTCTGTTCACGAGCTCGGCGTTGAAGGCGATAGTGGTGGGGTTTGCGAACAACGGAGGGCAGTTAAATGCGGCGTTTTGTGGTGGCGATGAGAAAGCTGGGGAGAGTCGTTGAGTTGGTTACTAGATACGAAACAAGTTTTCCCTTTCGTTCGGGCTGGATTTGAAGGGGAAATCCGTTTTTTTTTTTTAAAAAAAAAAGCCAGTGAAACGGTCGGAGGTGAGAGAAAGAGAGGGACGGTGAGAGAAGGAGATGGTGAGGGAAAGAGAAAGAGAAAGAAAGAAGAAAAAAAGAGGAAAAAAATCTCCGATGGCGGCGACTAGAGCTTTGGTGGGAGTGTTGAAGAAGAAGAAGGAGGTTGATGAGGGTGTTGAAGAAGAAGAAAGAAAAAAGAAATAAAAATATATTTATA ATGGTCGTGCAGCTAGATCCAACAACTTCGAACACGTTCGACAAAGTGTATTACCGGAATCTGATGGACAACAAAGGGTTGTTCAGATCAGACGAGGTTCTGTTCACGAGCTCGGCGTTGAAGGCGATAGTGGTGGGGTTTGCGAACAACGGAGGGCAGTTAAATGCGGCGTTTTGTGGTGGCGATGAGAAAGCTGGGGAGAGTCGTTGA MVVQLDPTTSNTFDKVYYRNLMDNKGLFRSDEVLFTSSALKAIVVGFANNGGQLNAAFCGGDEKAGESR Homology
BLAST of Lcy10g011310 vs. ExPASy Swiss-Prot
Match: Q43731 (Peroxidase 50 OS=Arabidopsis thaliana OX=3702 GN=PER50 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.0e-09 Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy Swiss-Prot
Match: Q9SZE7 (Peroxidase 51 OS=Arabidopsis thaliana OX=3702 GN=PER51 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.0e-09 Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy Swiss-Prot
Match: Q96522 (Peroxidase 45 OS=Arabidopsis thaliana OX=3702 GN=PER45 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.6e-08 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy Swiss-Prot
Match: Q43873 (Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 9.8e-08 Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy Swiss-Prot
Match: Q96509 (Peroxidase 55 OS=Arabidopsis thaliana OX=3702 GN=PER55 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy TrEMBL
Match: A0A6J1JS48 (Peroxidase OS=Cucurbita maxima OX=3661 GN=LOC111487061 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.0e-17 Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy TrEMBL
Match: A0A6J1E4E7 (Peroxidase OS=Cucurbita moschata OX=3662 GN=LOC111430690 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16 Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy TrEMBL
Match: A0A6J1BVN9 (Peroxidase OS=Momordica charantia OX=3673 GN=LOC111006126 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15 Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy TrEMBL
Match: A0A5D3DKX5 (Peroxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00010 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.0e-15 Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lcy10g011310 vs. ExPASy TrEMBL
Match: A0A1S3B2Q5 (Peroxidase OS=Cucumis melo OX=3656 GN=LOC103485477 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.0e-15 Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lcy10g011310 vs. NCBI nr
Match: XP_038885624.1 (peroxidase 55-like [Benincasa hispida]) HSP 1 Score: 97.1 bits (240), Expect = 6.5e-17 Identity = 48/66 (72.73%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lcy10g011310 vs. NCBI nr
Match: XP_022990048.1 (peroxidase 51-like [Cucurbita maxima]) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Lcy10g011310 vs. NCBI nr
Match: XP_022922827.1 (peroxidase 55-like [Cucurbita moschata]) HSP 1 Score: 94.7 bits (234), Expect = 3.2e-16 Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lcy10g011310 vs. NCBI nr
Match: KAG7033370.1 (Peroxidase 55, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lcy10g011310 vs. NCBI nr
Match: KAG6602684.1 (Peroxidase 55, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lcy10g011310 vs. TAIR 10
Match: AT4G37520.1 (Peroxidase superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10 Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. TAIR 10
Match: AT4G37530.1 (Peroxidase superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10 Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. TAIR 10
Match: AT4G37520.2 (Peroxidase superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10 Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. TAIR 10
Match: AT4G30170.1 (Peroxidase family protein ) HSP 1 Score: 58.9 bits (141), Expect = 1.8e-09 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Lcy10g011310 vs. TAIR 10
Match: AT5G67400.1 (root hair specific 19 ) HSP 1 Score: 57.0 bits (136), Expect = 7.0e-09 Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|