Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTGAAAATTTGCTTGAGAGTTGGGAAAGATTCAATCTTACCAATGACGAGGAATCCACTAAAGTTGACGTTGATCGTCAGACGACTTTAATCACCAGTCAATCTTTGGGGTTTAGCCTCATAGGCAAATTGGTTGCTCCCCAGATCATGTCAGCATGGAACATTCCTAATGGTCTTATGGTGGAAAAGCTGGGGCAAAATCTTTTTTTGTTCTCCTTTAGGACGGAAAACGACCAAACCCGAGTGCTTCGACAGGAACCATTGCTTTTTGAAAAATTTTTGCTCGTCCTTTCGAAGCCAATTCCGATGGTCAAGCCCACCGCTATGGAGTTCCAATTTACTACATTTTGGGTACATTTCTGTGATTTACCAATGGACCTTTACAATCGCTCAATGGCGGAGCAATTGGGTAATGCAATAGGTCGGTTTCAAGAATACGATAACGGGGGATGAGGATATGCATGGAAGGAGAGTCTGTGTGTTCGAGTTATTCTGGATATCACTTGTCCATTCTGAAGAGGTATTAAGGTTCGACTTGACGATTCTTTGGGTAGTGTTTGGTCCCCTATCAAATATGAGAAGCTGCCGGAAATTTGCATTTTCTGTGGAAGAATCGGCTATGGGAATCGGGACTGCTCTTTTCTGCTAACAAATGATGGATCTGTTGCGCAACGTCAAGAGTATGGGATGTGGATGGCTTTTACCAGGAGATCTTCCAACGTTTTCCGGTCTCCATCCACTAGTCCTGTGGGTTCGAATAGGAATTTGCCGGAAGCGTCGCCGGTTCATGCTGGAACGATGATCCGTAGTCAAGCAGGGGTGGCTAGGCAAATTGTGGGGTCACAACAACAGTAG
mRNA sequence
ATGACTTTTGAAAATTTGCTTGAGAGTTGGGAAAGATTCAATCTTACCAATGACGAGGAATCCACTAAAGTTGACGTTGATCGTCAGACGACTTTAATCACCAGTCAATCTTTGGGGTTTAGCCTCATAGGCAAATTGGTTGCTCCCCAGATCATGTCAGCATGGAACATTCCTAATGGTCTTATGGTGGAAAAGCTGGGGCAAAATCTTTTTTTGTTCTCCTTTAGGACGGAAAACGACCAAACCCGAGTGCTTCGACAGGAACCATTGCTTTTTGAAAAATTTTTGCTCGTCCTTTCGAAGCCAATTCCGATGGTCAAGCCCACCGCTATGGAGTTCCAATTTACTACATTTTGGGTACATTTCTGTGATTTACCAATGGACCTTTACAATCGCTCAATGGCGGAGCAATTGGGTAATGCAATAGGTCGAGGTATTAAGGTTCGACTTGACGATTCTTTGGGTAGTGTTTGGTCCCCTATCAAATATGAGAAGCTGCCGGAAATTTGCATTTTCTGTGGAAGAATCGGCTATGGGAATCGGGACTGCTCTTTTCTGCTAACAAATGATGGATCTGTTGCGCAACGTCAAGAGTATGGGATGTGGATGGCTTTTACCAGGAGATCTTCCAACGTTTTCCGGTCTCCATCCACTAGTCCTGTGGGTTCGAATAGGAATTTGCCGGAAGCGTCGCCGGTTCATGCTGGAACGATGATCCGTAGTCAAGCAGGGGTGGCTAGGCAAATTGTGGGGTCACAACAACAGTAG
Coding sequence (CDS)
ATGACTTTTGAAAATTTGCTTGAGAGTTGGGAAAGATTCAATCTTACCAATGACGAGGAATCCACTAAAGTTGACGTTGATCGTCAGACGACTTTAATCACCAGTCAATCTTTGGGGTTTAGCCTCATAGGCAAATTGGTTGCTCCCCAGATCATGTCAGCATGGAACATTCCTAATGGTCTTATGGTGGAAAAGCTGGGGCAAAATCTTTTTTTGTTCTCCTTTAGGACGGAAAACGACCAAACCCGAGTGCTTCGACAGGAACCATTGCTTTTTGAAAAATTTTTGCTCGTCCTTTCGAAGCCAATTCCGATGGTCAAGCCCACCGCTATGGAGTTCCAATTTACTACATTTTGGGTACATTTCTGTGATTTACCAATGGACCTTTACAATCGCTCAATGGCGGAGCAATTGGGTAATGCAATAGGTCGAGGTATTAAGGTTCGACTTGACGATTCTTTGGGTAGTGTTTGGTCCCCTATCAAATATGAGAAGCTGCCGGAAATTTGCATTTTCTGTGGAAGAATCGGCTATGGGAATCGGGACTGCTCTTTTCTGCTAACAAATGATGGATCTGTTGCGCAACGTCAAGAGTATGGGATGTGGATGGCTTTTACCAGGAGATCTTCCAACGTTTTCCGGTCTCCATCCACTAGTCCTGTGGGTTCGAATAGGAATTTGCCGGAAGCGTCGCCGGTTCATGCTGGAACGATGATCCGTAGTCAAGCAGGGGTGGCTAGGCAAATTGTGGGGTCACAACAACAGTAG
Protein sequence
MTFENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQIMSAWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIGRGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQEYGMWMAFTRRSSNVFRSPSTSPVGSNRNLPEASPVHAGTMIRSQAGVARQIVGSQQQ
Homology
BLAST of Lcy10g006890 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40
Identity = 95/248 (38.31%), Postives = 131/248 (52.82%), Query Frame = 0
Query: 1 MTFENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQIMS------- 60
M ENLL W++F LT++E+ +DVD + Q L +SL+GKL+A +I+S
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 ---AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTA 120
AW + + L VE +G+NLFLF F E D RV++ P F+K L+VL KP +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 MEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIG--------------------------- 180
+EF FW+H DLPM N++MA +LGNAIG
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 ----RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCS--FLLTNDGSVAQRQ 206
RGIK+ +D +G W PI+YE+LP+ C FCG IG+ + DC +L D S A
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRA-TS 240
BLAST of Lcy10g006890 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33
Identity = 86/256 (33.59%), Postives = 133/256 (51.95%), Query Frame = 0
Query: 1 MTFENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQIMS------- 60
M NLLE W+ F LT++E+ VD+D T + L SLI KL++ + +S
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 ---AWNIP-NGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPT 120
AW + V+ +G N+FLF+F +D+ R+LR P F++ L+++ P+ + KP
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 AMEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIG-------------------------- 180
M+F+ + WVHF DL + N++MA +LGNAIG
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 -----RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQE 213
RGIK+ LD +G W PI+YE+LP+ CGR+ + +DCS + SV++ +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNLQ 240
BLAST of Lcy10g006890 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28
Identity = 85/288 (29.51%), Postives = 130/288 (45.14%), Query Frame = 0
Query: 5 NLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQ----------IMSA 64
+LLE W+ F LT++EE T +DVD T L L+GKL + + +A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WNIPNGLM-VEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 124
W + N V+ LG NLFLFSF D+ ++ + P F++ L++++KP+ ++ P+ ++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIG------------------------------ 184
WV F DLP+ R MA +LGNA+G
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 -RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQEYGMW 233
RGIK+ LD +G W PI+YE+LP+ C CG S ++ +YG W
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 244
BLAST of Lcy10g006890 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 7.5e-24
Identity = 71/253 (28.06%), Postives = 118/253 (46.64%), Query Frame = 0
Query: 4 ENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKL----------VAPQIMS 63
+ + + WE F TNDE T V +DR ++T+ ++ ++ KL + + S
Sbjct: 2 DEITDLWEHFKSTNDENET-VTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61
Query: 64 AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 123
W + N E LG N+++ F++ ++++RVL P F K LLVL+ P +P M F
Sbjct: 62 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121
Query: 124 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIG------------------------------ 183
F FW+ ++P + + MA LG +G
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 181
Query: 184 -RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDC---SFLLTNDGSVAQRQEY 213
RGIK++ D +W P++YEKLP+ C CG+IG+ R+C S ++T + ++Y
Sbjct: 182 RRGIKLKNSDG-KDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSP----EQY 241
BLAST of Lcy10g006890 vs. ExPASy TrEMBL
Match:
A0A314YVX1 (CCHC-type domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_17609 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 3.2e-22
Identity = 71/263 (27.00%), Postives = 124/263 (47.15%), Query Frame = 0
Query: 4 ENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQ----------IMS 63
E ++ S E+ + ++E+ + V++ + L SL+GK+ ++
Sbjct: 2 EEVITSLEKALILTEDENDAIQVEQHDIDDVGERLKMSLVGKVFTTNGFNREAFKQTMLK 61
Query: 64 AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 123
WN ++V+ LG+NLFLF F TE D+ +VLR P F+K L++L P V P+ M
Sbjct: 62 IWNTAREVVVKDLGENLFLFIFATEGDRLKVLRSGPWNFDKALVLLEVPDGRVAPSKMHL 121
Query: 124 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIGR-----------------GIKVRLD----- 183
++ FW+ ++P+ +M Q+GN++GR I+V LD
Sbjct: 122 KYADFWIQIHNVPLCCMTTNMGRQIGNSLGRCLDVLEGMDGGCLGRFLRIRVCLDVSKPL 181
Query: 184 --------DSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQEYGMWM 227
S + + +YE+LPE C CGR+G+ ++C+F + A + YG+W+
Sbjct: 182 WRGKKLTLPSGNTEFVDFRYERLPEFCFCCGRVGHVFKECAF-VDQAAKQACEKPYGIWL 241
BLAST of Lcy10g006890 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 176.4 bits (446), Expect = 3.1e-40
Identity = 95/248 (38.31%), Postives = 131/248 (52.82%), Query Frame = 0
Query: 1 MTFENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQIMS------- 60
M ENLL W++F LT++E+ +DVD + Q L +SL+GKL+A +I+S
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 ---AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTA 120
AW + + L VE +G+NLFLF F E D RV++ P F+K L+VL KP +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 MEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIG--------------------------- 180
+EF FW+H DLPM N++MA +LGNAIG
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 ----RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCS--FLLTNDGSVAQRQ 206
RGIK+ +D +G W PI+YE+LP+ C FCG IG+ + DC +L D S A
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRA-TS 240
BLAST of Lcy10g006890 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 152.1 bits (383), Expect = 6.3e-33
Identity = 86/256 (33.59%), Postives = 133/256 (51.95%), Query Frame = 0
Query: 1 MTFENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQIMS------- 60
M NLLE W+ F LT++E+ VD+D T + L SLI KL++ + +S
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 ---AWNIP-NGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPT 120
AW + V+ +G N+FLF+F +D+ R+LR P F++ L+++ P+ + KP
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 AMEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIG-------------------------- 180
M+F+ + WVHF DL + N++MA +LGNAIG
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 -----RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQE 213
RGIK+ LD +G W PI+YE+LP+ CGR+ + +DCS + SV++ +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNLQ 240
BLAST of Lcy10g006890 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 137.1 bits (344), Expect = 2.1e-28
Identity = 85/288 (29.51%), Postives = 130/288 (45.14%), Query Frame = 0
Query: 5 NLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQ----------IMSA 64
+LLE W+ F LT++EE T +DVD T L L+GKL + + +A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WNIPNGLM-VEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 124
W + N V+ LG NLFLFSF D+ ++ + P F++ L++++KP+ ++ P+ ++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIG------------------------------ 184
WV F DLP+ R MA +LGNA+G
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 -RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTNDGSVAQRQEYGMW 233
RGIK+ LD +G W PI+YE+LP+ C CG S ++ +YG W
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 244
BLAST of Lcy10g006890 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 122.5 bits (306), Expect = 5.3e-24
Identity = 82/291 (28.18%), Postives = 134/291 (46.05%), Query Frame = 0
Query: 4 ENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQ----------IMS 63
++LL+ +LT++E++ V + ++T + L+GKL+ + ++S
Sbjct: 3 DSLLDLTRTLSLTSEEDAV-VRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLS 62
Query: 64 AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 123
W G+ V +G NLF+F F D+ RVL P F+K LL+L + P V+P+ ++
Sbjct: 63 VWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQL 122
Query: 124 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIG------------------------------ 183
FWVH C+LP+ L N+ + E +GNA+G
Sbjct: 123 TRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPL 182
Query: 184 -RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTN-DGSVAQRQEYGM 243
RG+K+ L S +W KYE+LP C FCGR+G+ R+C L++ DGS +YG
Sbjct: 183 RRGMKLAL-SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGA 242
Query: 244 WMAFTRRSSNVFRSPSTSPVGSNRNLPEASPVHAGTMIRSQAGVARQIVGS 253
W+ R N+ S ++ + P G +R+ Q G+
Sbjct: 243 WL----RMDNIKSKGSRRAGSIDKGVGGTHPGGQGIPLRTNHAQVNQEEGA 287
BLAST of Lcy10g006890 vs. NCBI nr
Match:
XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis])
HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23
Identity = 70/242 (28.93%), Postives = 120/242 (49.59%), Query Frame = 0
Query: 4 ENLLESWERFNLTNDEESTKVDVDRQTTLITSQSLGFSLIGKLVAPQ----------IMS 63
++LL+ +LT++E++ V + +T + L+ KL+ + ++S
Sbjct: 3 DSLLDLTRTLSLTSEEDAV-VRIGGDSTSLMMGKSDMCLVSKLLTRRPFNVEAMKSTLLS 62
Query: 64 AWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKPTAMEF 123
W G+ V +G NLF+F F D+ R+L P F+K LL+L + P V+P+ ++
Sbjct: 63 VWQPTKGMQVRVIGDNLFVFVFGHVVDKRRILSNGPWTFDKHLLMLGEMDPNVQPSDIQL 122
Query: 124 QFTTFWVHFCDLPMDLYNRSMAEQLGNAIG------------------------------ 183
+ FWVH C+LP+ L N+ + + +GNA+G
Sbjct: 123 TWVQFWVHVCNLPLILMNKKVGQIVGNAVGQFIDMDYEDGGIAWGRTMLIRVALDVRKPL 182
Query: 184 -RGIKVRLDDSLGSVWSPIKYEKLPEICIFCGRIGYGNRDCSFLLTN-DGSVAQRQEYGM 204
RG+K+ L S+ +W KYE+LP C FCGR+G+ +R+C L++ DG+ +YG
Sbjct: 183 RRGMKLAL-SSVEPIWVDFKYERLPIYCYFCGRLGHSDRECDAKLSSADGTRVDSLQYGA 242
BLAST of Lcy10g006890 vs. TAIR 10
Match:
AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 27/96 (28.12%), Postives = 44/96 (45.83%), Query Frame = 0
Query: 49 PQIMSAWNIPNGLMVEKLGQNLFLFSFRTENDQTRVLRQEPLLFEKFLLVLSKPIPMVKP 108
P+I + +G ++E F F F E VLR+ P F ++++L + P +
Sbjct: 154 PRIWGQSGLVHGRIME---GRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRWEPQIP- 213
Query: 109 TAMEFQFTTFWVHFCDLPMDLYNRSMAEQLGNAIGR 145
F F FWV +P NR + E +G A+G+
Sbjct: 214 ---LFPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQ 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 1.5e-40 | 38.31 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 3.1e-33 | 33.59 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 1.0e-28 | 29.51 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1D765 | 7.5e-24 | 28.06 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A314YVX1 | 3.2e-22 | 27.00 | CCHC-type domain-containing protein OS=Prunus yedoensis var. nudiflora OX=209455... | [more] |
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 3.1e-40 | 38.31 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 6.3e-33 | 33.59 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 2.1e-28 | 29.51 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_028122006.1 | 5.3e-24 | 28.18 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
XP_028071384.1 | 1.2e-23 | 28.93 | uncharacterized protein LOC114273772 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
AT3G31430.1 | 1.7e-04 | 28.13 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |