Lcy10g004890 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g004890
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr10: 12961756 .. 12964959 (-)
RNA-Seq ExpressionLcy10g004890
SyntenyLcy10g004890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGCGTGGGTTAGGGACTGCCTTATGGCCATTTCGAAGGCAAAAAACCCGATGGGATTTTGGAGAAGAAGAAGGCTAGATGCTGTAGTAATTTTTTTTTTCAGGTTCTGAGGAATTTGAAAGGAAGATTTGGCCTGATATCCATGGAACCCTTTCGCGGGCGGAAGACCTCGATCTTTATTCCAGAAGGTTCTAACTCGAAGGGATGGGGAGCTTTGGAAGCATTGATGACGGGGCTTCTTCCTCCCTTGAAGCCGGCGAATCAGAAAGGAAATCAAGAAGGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGTAGTGAATGAGGGCCCGAGTCGGATACGTGAAGAGGATTTGAAATTCTCGGAAGACTTCGATTTTGCCTTCGATTGCACGGAGGCGGTGATTGTAGAGAGGACCTCCATTAACTCGAGTTGGGGAGATATCAGGGAAGCGTGCTTGAGGTTAGTTAACATTGGTCTATCTCTAAAACCTTTCTGTGCTAACATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGACTTGATTCGGACGGGCTCTTCTGCGAATTTCGATTATTTTTCAATCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAGTGCCAAAATTTCAATGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTGAGGACCACGCAGATGATCTCCAATCTTGCAGGTATGTGCGGGGGATTAGAGGAAGAAAAAGAGAAATTCGGTGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAGGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACATACTTTCCAATGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGTGGGTTTGGTAAGTCCAAGGCAGTCTGACATAATAGTACCACAGGCACCAGTCGCAGTAGATATGGCAGAGCAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTAGAGAAGGGAGATTTGGGCCTGGGCCTGGGCCTAAAAATGGGTTGCGGGTTGATATTCCAAATTTTAACCTAGAAGACAACGGTATTATTAATTTTGAAGCCCAGAGTGTGGTTTGTAAGAAGCTGAATAAGGAGGGAGATGGGTCGGTGAAGATAAAAGACGGGCAGGGGCCTGACCTTTCCCAGAAGATGGACTCGTCGACAGAATCTCTTGGGCTCAACATGTATGACTTAGAGTGGGACAGTGTAATTAACCAAGCAGAGGATTTTAGTTTTGAGGAAGAGGCAGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGGTGTTTTCAGAGGAGAAATCGCCGACTCAACACGCCAGCCCGTTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGACGGTAGGGGTGTGTCGCAAGATGTCTCGACTTTAGGGGATCCGACTCAACCGCTGATCAAGGTAAATTCTGACAGGATTCCTATCCAGGTACGTTCTCCTTCTTTGGATCCTTCACCTTCTAATTTGATTGAGAGGGGAGGGTGGATGTGTGTAGGGGGTTGTCCTATCCGTACCCTTATTCTGTAGCCTTACCTTTGGGAGAGGGAAGGGGAAAGTTCTTGGGCTTCAACCATAACCTCAGGCACCCTCTTTTATTGAATACTTTCCAACCTTCTGGAAGTGCCTTTTCCTACCTGTCTGCTTATTCTGTAGGAGAGAGAATGCCACCATTTGCTTCCTTTGTTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGGCTTGTGAACAATATTCCTTTACCTATCTATAGCCCCTCGGACCTTGAAGGCCTCTCTATTAAACAAGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCGTTTGCGTCGATTGGGATAAGAGAAGTTCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGTAAAACCCCCAACAATAAGAGAGGAGACTCAAAAAAAGTAGATAGGGAATTGAGAAGACTGGAGTCATCTGTGAACTATTACAGGAGAAAGACCTCTAAGGAGGTTGGGGAAGCGTCGGGTTCCAAATGAAAATGATTTCTTGGAATGTGAGAGGCTTGGGTGGGAGAGAGAAGCGCAGGGTGGTCAAAGAGGTTATCTCTTAGGAATCCCCGGACATTGTGATTTTGTTGGAAACCAAGAGGTATAAATATAACCGTGAGTTCGTTCGTAGCATCTGGGGAAATAGAAAAGTGGAGTAGACCGGTATTGAGTCGGTGGGAGCCTCAGGAGGGGTGCTCATTATGTGGAACAGTATTTCTGTGAACTGTTTGGAGGTGCAGATAGGTGTGTTTACCGTGTCTATTAATATTACCTGGAAGGGCAAGGACTTAGGGTGGGTCACCGACACCTACGGCCCTCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCGGTGATCTTTTTGGGTTATACGGGAACAATTGGTGCATTTTGGGGGATTTTAATGTCACCCGTTCCCTTTGGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGCTTTTCAACGAGTGGATTGAGGATTGTAGTCTGTTTGATCCTCCCTTATTTAACGGGAAGTTTACTTGGGCTAGCAATAGAGCGCGCAGTAGAATTGACAGAATCTTGTATGCTCAGGGTTGGATGGATACCTTCAAGTGTGTCTATTAATATTACCTAGAAGGGCAAGGACTTAGGGTGGGTCATCGGCACCTACGGCCCTCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCAGTGATCTTTCTGGGTTATGCGGGAACAATTGGTGCATTTTGGGGGATTTTAATGTCACCCGTTCCCCTTTGGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGCTTTTCAACGAGTGGATTGAGGATTGTAGTCTGTTTGATCCTCCCTTATTTAACGGGAAGTTTACTTGGGCTAGTACTAGAGCGCGCAGTAGAATTGACAGAATCTTGTATGCTCAGGGTTGGATGGATACCTTCAAGTGTGTCTATTAA

mRNA sequence

GTTCGCGTGGGTTAGGGACTGCCTTATGGCCATTTCGAAGGCAAAAAACCCGATGGGATTTTGGAGAAGAAGAAGGCTAGATGCTGTAGTAATTTTTTTTTTCAGGTTCTGAGGAATTTGAAAGGAAGATTTGGCCTGATATCCATGGAACCCTTTCGCGGGCGGAAGACCTCGATCTTTATTCCAGAAGGTTCTAACTCGAAGGGATGGGGAGCTTTGGAAGCATTGATGACGGGGCTTCTTCCTCCCTTGAAGCCGGCGAATCAGAAAGGAAATCAAGAAGGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGTAGTGAATGAGGGCCCGAGTCGGATACGTGAAGAGGATTTGAAATTCTCGGAAGACTTCGATTTTGCCTTCGATTGCACGGAGGCGGTGATTGTAGAGAGGACCTCCATTAACTCGAGTTGGGGAGATATCAGGGAAGCGTGCTTGAGGTTAGTTAACATTGGTCTATCTCTAAAACCTTTCTGTGCTAACATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGACTTGATTCGGACGGGCTCTTCTGCGAATTTCGATTATTTTTCAATCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAGTGCCAAAATTTCAATGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTGAGGACCACGCAGATGATCTCCAATCTTGCAGGTATGTGCGGGGGATTAGAGGAAGAAAAAGAGAAATTCGGTGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAGGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACATACTTTCCAATGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGTGGGTTTGGTAAGTCCAAGGCAGTCTGACATAATAGTACCACAGGCACCAGTCGCAGTAGATATGGCAGAGCAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTAGAGAAGGGAGATTTGGGCCTGGGCCTGGGCCTAAAAATGGGTTGCGGGTTGATATTCCAAATTTTAACCTAGAAGACAACGGTATTATTAATTTTGAAGCCCAGAGTGTGGTTTGTAAGAAGCTGAATAAGGAGGGAGATGGGTCGGTGAAGATAAAAGACGGGCAGGGGCCTGACCTTTCCCAGAAGATGGACTCGTCGACAGAATCTCTTGGGCTCAACATGTATGACTTAGAGTGGGACAGTGTAATTAACCAAGCAGAGGATTTTAGTTTTGAGGAAGAGGCAGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGGTGTTTTCAGAGGAGAAATCGCCGACTCAACACGCCAGCCCGTTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGACGGTAGGGGATTCCTATCCAGGAGAGAGAATGCCACCATTTGCTTCCTTTGTTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGGCTTGTGAACAATATTCCTTTACCTATCTATAGCCCCTCGGACCTTGAAGGCCTCTCTATTAAACAAGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCGTTTGCGTCGATTGGGATAAGAGAAGTTCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGAGAAAGACCTCTAAGGAGGTTGGGGAAGCGTCGGGTTCCAAATGAAAATGATTTCTTGGAATGTGAGAGGCTTGGGTGGGAGAGAGAAGCGCAGGGTGGTCAAAGAGGTTATCTCTTAGGAATCCCCGGACATTGTGATTTTGTTGGAAACCAAGAGATAGGTGTGTTTACCGTGTCTATTAATATTACCTGGAAGGGCAAGGACTTAGGGTGGGTCACCGACACCTACGGCCCTCCAAGGCCCAAAGGGTGGGTCATCGGCACCTACGGCCCTCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCAGTGATCTTTCTGGGTTATGCGGGAACAATTGGTGCATTTTGGGGGATTTTAATGTCACCCGTTCCCCTTTGGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGCTTTTCAACGAGTGGATTGAGGATTGTAGTCTGTTTGATCCTCCCTTATTTAACGGGAAGTTTACTTGGGCTAGTACTAGAGCGCGCAGTAGAATTGACAGAATCTTGTATGCTCAGGGTTGGATGGATACCTTCAAGTGTGTCTATTAA

Coding sequence (CDS)

ATGGAACCCTTTCGCGGGCGGAAGACCTCGATCTTTATTCCAGAAGGTTCTAACTCGAAGGGATGGGGAGCTTTGGAAGCATTGATGACGGGGCTTCTTCCTCCCTTGAAGCCGGCGAATCAGAAAGGAAATCAAGAAGGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGTAGTGAATGAGGGCCCGAGTCGGATACGTGAAGAGGATTTGAAATTCTCGGAAGACTTCGATTTTGCCTTCGATTGCACGGAGGCGGTGATTGTAGAGAGGACCTCCATTAACTCGAGTTGGGGAGATATCAGGGAAGCGTGCTTGAGGTTAGTTAACATTGGTCTATCTCTAAAACCTTTCTGTGCTAACATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGACTTGATTCGGACGGGCTCTTCTGCGAATTTCGATTATTTTTCAATCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAGTGCCAAAATTTCAATGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTGAGGACCACGCAGATGATCTCCAATCTTGCAGGTATGTGCGGGGGATTAGAGGAAGAAAAAGAGAAATTCGGTGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAGGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACATACTTTCCAATGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGTGGGTTTGGTAAGTCCAAGGCAGTCTGACATAATAGTACCACAGGCACCAGTCGCAGTAGATATGGCAGAGCAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTAGAGAAGGGAGATTTGGGCCTGGGCCTGGGCCTAAAAATGGGTTGCGGGTTGATATTCCAAATTTTAACCTAGAAGACAACGGTATTATTAATTTTGAAGCCCAGAGTGTGGTTTGTAAGAAGCTGAATAAGGAGGGAGATGGGTCGGTGAAGATAAAAGACGGGCAGGGGCCTGACCTTTCCCAGAAGATGGACTCGTCGACAGAATCTCTTGGGCTCAACATGTATGACTTAGAGTGGGACAGTGTAATTAACCAAGCAGAGGATTTTAGTTTTGAGGAAGAGGCAGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGGTGTTTTCAGAGGAGAAATCGCCGACTCAACACGCCAGCCCGTTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGACGGTAGGGGATTCCTATCCAGGAGAGAGAATGCCACCATTTGCTTCCTTTGTTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGGCTTGTGAACAATATTCCTTTACCTATCTATAGCCCCTCGGACCTTGAAGGCCTCTCTATTAAACAAGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCGTTTGCGTCGATTGGGATAAGAGAAGTTCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGAGAAAGACCTCTAAGGAGGTTGGGGAAGCGTCGGGTTCCAAATGAAAATGATTTCTTGGAATGTGAGAGGCTTGGGTGGGAGAGAGAAGCGCAGGGTGGTCAAAGAGGTTATCTCTTAGGAATCCCCGGACATTGTGATTTTGTTGGAAACCAAGAGATAGGTGTGTTTACCGTGTCTATTAATATTACCTGGAAGGGCAAGGACTTAGGGTGGGTCACCGACACCTACGGCCCTCCAAGGCCCAAAGGGTGGGTCATCGGCACCTACGGCCCTCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCAGTGATCTTTCTGGGTTATGCGGGAACAATTGGTGCATTTTGGGGGATTTTAATGTCACCCGTTCCCCTTTGGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGCTTTTCAACGAGTGGATTGAGGATTGTAGTCTGTTTGATCCTCCCTTATTTAACGGGAAGTTTACTTGGGCTAGTACTAGAGCGCGCAGTAGAATTGACAGAATCTTGTATGCTCAGGGTTGGATGGATACCTTCAAGTGTGTCTATTAA

Protein sequence

MEPFRGRKTSIFIPEGSNSKGWGALEALMTGLLPPLKPANQKGNQEGRITSNIGSKINTSKSFAEVVNEGPSRIREEDLKFSEDFDFAFDCTEAVIVERTSINSSWGDIREACLRLVNIGLSLKPFCANMAVGLCGSDKEAKDLIRTGSSANFDYFSIHEWDFKVIAERKCQNFNGGWITALDVPPFLRTTQMISNLAGMCGGLEEEKEKFGENCWTDEICFKVKGNDSGFIPTSCYVNHGKTYFPMRFVIGKGTGFEQAGVGLVSPRQSDIIVPQAPVAVDMAEQRIPSPRSHVKSREGRFGPGPGPKNGLRVDIPNFNLEDNGIINFEAQSVVCKKLNKEGDGSVKIKDGQGPDLSQKMDSSTESLGLNMYDLEWDSVINQAEDFSFEEEAASDPSVVSYSEDESFLSTPAAKEIESINLNAVFSEEKSPTQHASPLQKEDNQIMPTEDLQRDSLALTVGDSYPGERMPPFASFVGVPGSGIGGGVQPFPNGLVNNIPLPIYSPSDLEGLSIKQGNHGFWQPGWAAFASIGIREVPVDQTPTNHLIDDKDGERPLRRLGKRRVPNENDFLECERLGWEREAQGGQRGYLLGIPGHCDFVGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDLSGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWASTRARSRIDRILYAQGWMDTFKCVY
Homology
[Close]
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match: A0A5D3DEZ6 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00210 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-27
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 635 KGWVIGTYGPPRPKGRQEFWNELSDLSGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMK 694
           KG+ +  YGPPR  GR  FW EL DL   CG  WC++GDFNV  SP EKA GG++++S++
Sbjct: 166 KGFKVCVYGPPRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIR 225

Query: 695 LFNEWIEDCSLFDPPLFNGKFTWASTRARSRIDRILYAQGWMDTF 740
            FN +I+D  LFDPPL  GKFT A+ RA +RIDR+L ++ W++ F
Sbjct: 226 CFNNFIDDSGLFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERF 270

[Close]
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match: A0A5E4F859 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035883 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.3e-27
Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = 0 

Query: 601 VGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDL 660
           + + EIG F+VSI I           D  G      W+ G YGP  P+ R+ FW EL+ L
Sbjct: 46  ISDFEIGEFSVSIRI----------LDASG---GDWWLSGIYGPCHPRDRRRFWEELAGL 105

Query: 661 SGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWAST 720
            GLCGN WCI GDFNV R   EK++GGR++ SMK+FN++I+D +L DP L N  FTW++ 
Sbjct: 106 FGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNASFTWSNF 165

Query: 721 RARS---RIDRILYAQGWMDTF 740
           R  +   R+DR L+++ W D+F
Sbjct: 166 RENAVCRRLDRFLFSEEWEDSF 174

[Close]
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match: A0A5A7SSQ8 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00550 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-26
Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 642 YGPPRPKGRQEFWNELSDLSGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIE 701
           YGPPR  GR  FW EL DL   CG  WC++GDFNV  SP EKA GG++++S++ FN +I+
Sbjct: 223 YGPPRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFID 282

Query: 702 DCSLFDPPLFNGKFTWASTRARSRIDRILYAQGWMDTF 740
           D  LFDPPL  GKFT A+ RA +RIDR+L ++ W++ F
Sbjct: 283 DSGLFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERF 320

[Close]
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match: A0A5E4GN72 (PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B014918 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-26
Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 0 

Query: 601 VGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDL 660
           + + EIG F+VSI I           D  G      W+ G YGP  P+ R+ FW EL+ L
Sbjct: 46  ISDFEIGEFSVSIRI----------LDASG---GDWWLSGIYGPCHPRDRRRFWEELAGL 105

Query: 661 SGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWAST 720
            GLCGN WCI GDFNV R   EK++GGR++ SMK FN++I+D +L DP L N  FTW++ 
Sbjct: 106 FGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPNLLNASFTWSNF 165

Query: 721 RARS---RIDRILYAQGWMDTF 740
           R  +   R+DR L+++ W D+F
Sbjct: 166 RENAVCRRLDRFLFSEEWEDSF 174

[Close]
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match: M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-25
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 0 

Query: 601 VGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDL 660
           + + EIG F+VSI I           D  G      W+ G YG   P+ R+ FW EL+ L
Sbjct: 364 ISDFEIGEFSVSIRI----------LDASG---GDWWLSGIYGLCHPRDRRRFWEELAGL 423

Query: 661 SGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWAST 720
            GLCGN WCI GDFNV R   EK++GGR++ SMK FN++I+D +L DP L N  FTW++ 
Sbjct: 424 FGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKNFNDFIDDTNLRDPNLLNASFTWSNF 483

Query: 721 RARS---RIDRILYAQGWMDTF 740
           R  +   R+DR L+ + W D+F
Sbjct: 484 RENAVCRRLDRFLFFEAWEDSF 492

[Close]
BLAST of Lcy10g004890 vs. NCBI nr
Match: TYK22164.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-27
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 635 KGWVIGTYGPPRPKGRQEFWNELSDLSGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMK 694
           KG+ +  YGPPR  GR  FW EL DL   CG  WC++GDFNV  SP EKA GG++++S++
Sbjct: 166 KGFKVCVYGPPRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIR 225

Query: 695 LFNEWIEDCSLFDPPLFNGKFTWASTRARSRIDRILYAQGWMDTF 740
            FN +I+D  LFDPPL  GKFT A+ RA +RIDR+L ++ W++ F
Sbjct: 226 CFNNFIDDSGLFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERF 270

[Close]
BLAST of Lcy10g004890 vs. NCBI nr
Match: VVA21938.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 132.5 bits (332), Expect = 1.5e-26
Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = 0 

Query: 601 VGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDL 660
           + + EIG F+VSI I           D  G      W+ G YGP  P+ R+ FW EL+ L
Sbjct: 46  ISDFEIGEFSVSIRI----------LDASG---GDWWLSGIYGPCHPRDRRRFWEELAGL 105

Query: 661 SGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWAST 720
            GLCGN WCI GDFNV R   EK++GGR++ SMK+FN++I+D +L DP L N  FTW++ 
Sbjct: 106 FGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNASFTWSNF 165

Query: 721 RARS---RIDRILYAQGWMDTF 740
           R  +   R+DR L+++ W D+F
Sbjct: 166 RENAVCRRLDRFLFSEEWEDSF 174

[Close]
BLAST of Lcy10g004890 vs. NCBI nr
Match: KAA0032235.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 3.4e-26
Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 642 YGPPRPKGRQEFWNELSDLSGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIE 701
           YGPPR  GR  FW EL DL   CG  WC++GDFNV  SP EKA GG++++S++ FN +I+
Sbjct: 223 YGPPRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFID 282

Query: 702 DCSLFDPPLFNGKFTWASTRARSRIDRILYAQGWMDTF 740
           D  LFDPPL  GKFT A+ RA +RIDR+L ++ W++ F
Sbjct: 283 DSGLFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERF 320

[Close]
BLAST of Lcy10g004890 vs. NCBI nr
Match: VVA41200.1 (PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis])

HSP 1 Score: 131.3 bits (329), Expect = 3.4e-26
Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 0 

Query: 601 VGNQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDL 660
           + + EIG F+VSI I           D  G      W+ G YGP  P+ R+ FW EL+ L
Sbjct: 46  ISDFEIGEFSVSIRI----------LDASG---GDWWLSGIYGPCHPRDRRRFWEELAGL 105

Query: 661 SGLCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWAST 720
            GLCGN WCI GDFNV R   EK++GGR++ SMK FN++I+D +L DP L N  FTW++ 
Sbjct: 106 FGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPNLLNASFTWSNF 165

Query: 721 RARS---RIDRILYAQGWMDTF 740
           R  +   R+DR L+++ W D+F
Sbjct: 166 RENAVCRRLDRFLFSEEWEDSF 174

[Close]
BLAST of Lcy10g004890 vs. NCBI nr
Match: XP_021820446.1 (uncharacterized protein LOC110762145 [Prunus avium])

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-23
Identity = 61/140 (43.57%), Postives = 77/140 (55.00%), Query Frame = 0 

Query: 603 NQEIGVFTVSINITWKGKDLGWVTDTYGPPRPKGWVIGTYGPPRPKGRQEFWNELSDLSG 662
           + EI  F+VSI I              G      W+ G YGP R + R  FW EL+ L G
Sbjct: 83  DSEIAEFSVSIKIR-------------GTSGADWWLSGIYGPCRQRDRGRFWVELAALYG 142

Query: 663 LCGNNWCILGDFNVTRSPLEKASGGRVSKSMKLFNEWIEDCSLFDPPLFNGKFTWASTRA 722
           LCG NWCI GDFNV R   +K++GG V+ SM+ FN +I D +L DP L N  FTW++ R 
Sbjct: 143 LCGENWCIGGDFNVVRFVSDKSNGGGVTSSMRTFNNFINDTNLRDPRLLNASFTWSNGRE 202

Query: 723 R---SRIDRILYAQGWMDTF 740
                R+DR L+  GW D F
Sbjct: 203 NVVCRRLDRFLFTGGWEDCF 209

The following BLAST results are available for this feature:
BLAST of Lcy10g004890 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy10g004890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DEZ61.1e-2753.33Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa... [more]
A0A5E4F8597.3e-2745.07Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... [more]
A0A5A7SSQ81.6e-2655.10Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa... [more]
A0A5E4GN721.6e-2645.07PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=AL... [more]
M5XUF85.2e-2544.37Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
BLAST of Lcy10g004890 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK22164.12.3e-2753.33peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa][more]
VVA21938.11.5e-2645.07Hypothetical predicted protein, partial [Prunus dulcis][more]
KAA0032235.13.4e-2655.10peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa][more]
VVA41200.13.4e-2645.07PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis][more]
XP_021820446.15.9e-2343.57uncharacterized protein LOC110762145 [Prunus avium][more]
BLAST of Lcy10g004890 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 605..743
e-value: 1.8E-17
score: 65.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 627..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..313
NoneNo IPR availablePANTHERPTHR33710:SF32SUBFAMILY NOT NAMEDcoord: 624..742
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 624..742

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g004890.1Lcy10g004890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0016853 isomerase activity