Lcy10g004230 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g004230
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CASP-like protein
Location	Chr10: 9165204 .. 9167482 (+)
RNA-Seq Expression	Lcy10g004230
Synteny	Lcy10g004230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGAGCCATGCGACGGTTCACCCTGTCGAGGATCCCCCCACAACCGACGGCGCGAATGCGCCAAGGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACTCGCGGAGGACTCGCTTTGCGATTCTCTCAGTTTGTGTTTGCGGCGGCGGCGCTGGTTGTCATGGCCACTACTAGCGATTTCCCTTCCGTTACTGCCTTTTGGTAAATCTCAATTTCCCTAAATTGGACCTCTCTCTCTGGATTTTCGACTTTGTTTTGTCTGTTACTCCATTTTTCTTCTATTTCTGTGGAAAGAAAAGGCGATTTGTTCTATTTGTAGCCTTTGGATCTAGGATTGGTTGTTTTGGATTTTTTCGAGTCTACCGCAGAGAGAGTACTTTTGAAGTAATTCGACTTGCTTTGGGAATTAGATTTAATTTTCTGTGAATTAGATTCATTTACTTCGTTTTCATTGGAATGCTACTTGGGTGCGAAATTATGGTCGAATTTTCTGATAAGCTAAGGCCGAATTTTGGAGCTAACGAACAAGCGTAAAATGTATGGGTTGGTTGTTGGTTGGTCAATACGCTGAAGATGCAACCAATGTCTATTAAAATTAAATGGAAAGCTCAAGTGGAACCTTTAGTATAGAGGAGCTTGATGACATAGTTGATGGGTTCATTAATCAGTTGCCCCAGGGCTCTGAACTTTGTCTCTTCACCCACCATCGGTAATTATGGTCCTTGGTTAAGTAGTAAAATGCTAGGTATGGTTGGAGCATTTCATGGTCCTCTTGGAGGCTGTGAGAAAGAACTTAGGAATTATGAATTCCTGGACATGTAAAGAGTGTTGATAACTTGTTCAGATTGTTATTGACTGATAATAGTCATTTCTTATGTGGTTGGTTCCAGATTCATTGACGTTATTTATTTCATGTTTGAGTTCTTTGCAGTTGTATCCAAATCTTGTCCTTAGTCTCTATGTGTGTGCTGTTCCTTGAAAGTTGAAAAACCTTCTGCTATTTTCAGTTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACGTATATGCTCTATTAGTGAGAAGATCATTACAGAATAGCAGGATAGTCAGCTTATTCACCATTGGAGATGGGGTATGTTTATATCAAATGTGCCAAAAACTTTGATTAGGCATACTTTTCATCCATAGATTCACTCTTATGTTCTTGAATACTCTGGAAGCTGATTGCTGCATTACTAGTTAGCTCAAGTCCATGTTTCTTGGATTGGAAGTGGAACCAATGGAATTAATGCCTTTTAATATGCTAACTTTAATCCTAATGGTATTCTCATAAGGTTGTTACTAATCAATGAACTACTTGTTATTGCTAGAGAAATTGATGCTGATTATTTTATTTAAATTCTTTTTGTTTTCATATGCAACTTGGTTTACTATGATGAAATCCCCATTTGATCTTTGGCTGGAGTGAAACCATTATTTGAGAGGTCCTGGGAGGAAGAGGTCTGGACATTTGTTAGGTTCTTAATTTTAATGTTTCTCATTGGACATCGATGGTCAAGGAGTTCTATAATTATTCCTTAGGTCTCATTTGGTTAGATTGGAGTCCCTTATTAGTCTAGGTGGGGTCATTTTGTGGGGCTGGTTTCTTTTTTTTGTGTACCCCTTGTAGTCTTTCATTTTTCCTCAATAAAAGGTGTGCTTCTAAAAAAAATCCTCATTTCGTGTTGTTCTGGTTCCCATTGAATCTAATTCTGTCATACTTGTATCAAGTTAAAATTGGTCAGACTCATTTCATGATTTTTTCCTTCATTTAACCATAAAAGTGAATTGGACTTTCCATCGTTGTTGCTACACACATGGACGCATATCACTTTCTGTAGCATGCCTGTTGAATATAAATTTTTTATGTTCGCAATCATCTCATATGATAATATATTGAATACTTAGATTAGCCCCCTAGAACTCCCAAATGTCTGCAACCATTCTCTTCGGACCAATTATCAACAATGTGCTTTTTCCTTACTCTGAATTGTTACTTGCCAATTAGCTAACGCTTGAATGTGTTCTGCAGATCACATCTACTCTCACGTTTGCTGCAGCTTGTGCTTCTGCAGGCATCACAGTCCTTATAGACAACGATCTAGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTCATTAGCTGGTTTATGGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGTTGA

mRNA sequence

ATGAATGTGAGCCATGCGACGGTTCACCCTGTCGAGGATCCCCCCACAACCGACGGCGCGAATGCGCCAAGGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACTCGCGGAGGACTCGCTTTGCGATTCTCTCAGTTTGTGTTTGCGGCGGCGGCGCTGGTTGTCATGGCCACTACTAGCGATTTCCCTTCCGTTACTGCCTTTTGTTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACGTATATGCTCTATTAGTGAGAAGATCATTACAGAATAGCAGGATAGTCAGCTTATTCACCATTGGAGATGGGATCACATCTACTCTCACGTTTGCTGCAGCTTGTGCTTCTGCAGGCATCACAGTCCTTATAGACAACGATCTAGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTCATTAGCTGGTTTATGGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGTTGA

Coding sequence (CDS)

ATGAATGTGAGCCATGCGACGGTTCACCCTGTCGAGGATCCCCCCACAACCGACGGCGCGAATGCGCCAAGGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACTCGCGGAGGACTCGCTTTGCGATTCTCTCAGTTTGTGTTTGCGGCGGCGGCGCTGGTTGTCATGGCCACTACTAGCGATTTCCCTTCCGTTACTGCCTTTTGTTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACGTATATGCTCTATTAGTGAGAAGATCATTACAGAATAGCAGGATAGTCAGCTTATTCACCATTGGAGATGGGATCACATCTACTCTCACGTTTGCTGCAGCTTGTGCTTCTGCAGGCATCACAGTCCTTATAGACAACGATCTAGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTCATTAGCTGGTTTATGGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGTTGA

Protein sequence

MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR

Homology

[Close]

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-74
Identity = 145/179 (81.01%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPP--TTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMA 60
           MNVSHA+VHPVEDPP   T+  N PRVRM DMEGMPGT  GLALRF QF+FAAAAL VMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITST 120
           +TSDFPSVTAFCYLVAA GLQSLWSL LA +DVYA++V+RSLQN R+VSLF IGDG+TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           LTFAAACASAGITVLIDNDL SC++NHCVQFET+TA+AFISWF ALPSF  NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-61
Identity = 124/177 (70.06%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MN SH  VHPVE PP TD  +APRVRMKD +GMPGT GGLALR  QF FA  A  +M +T
Sbjct: 1   MNPSHPAVHPVEAPP-TDVHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLST 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
            DF +VTAFCYLVAA  LQ LWSL LA ID YALLV+RSL+NS +VSLF +GDG+T+TLT
Sbjct: 61  DDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLI NDL  C +NHC ++ETATAMAF+SWFM  PSF + FW LASR
Sbjct: 121 FAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-59
Identity = 121/177 (68.36%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPR-VRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMAT 60
           M  S   VHPVE PP  D A  PR V MKD+ GMPGT GGL LR +QF FAA AL VMA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  TSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTL 120
           T+DFPSVT+FC+LVAAA LQ LWS  LA +D+YALLV+R L+N R V LF IGDGIT+ L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLAS 177
           TF+AACAS+GITVLIDNDL  CSENHC  FE+ATAMAF+SWF   PSF +NFWS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.2e-59
Identity = 119/178 (66.85%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPR-VRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMAT 60
           M  S   VHPVE PP TD    P  V MKD+ GMPGT GGL LR +QFVFA  AL VMA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  TSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTL 120
           TSDFPSVTAFCYLVAA  +Q LWS  LA +D+YALLV+R L+N R V LF IGDGIT+ L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           TF AAC+SAGITVLIDNDL  C+ENHC  F+TATA+AF+SWF   PSF +NFWS+A+R
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot
Match: P0DI69 (CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.8e-56
Identity = 113/177 (63.84%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MN SH  VHPV  PP   G   PR+RMK+++GMPGT GGL LR  QF FA  A  +M + 
Sbjct: 1   MNASHPAVHPVGVPPAVAGQLPPRMRMKEIQGMPGTIGGLLLRLGQFCFALVAFSIMVSI 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
            +F +VTAFCYLVAA  LQ LWSL LA ID YALLV+RSL+NS +VSL  +GDG+T+TLT
Sbjct: 61  ENFSTVTAFCYLVAATVLQCLWSLALAIIDGYALLVKRSLRNSLLVSLLVVGDGVTATLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLI NDL  C ENHC ++ETATA+AF+SWFM   SF + FW LA+R
Sbjct: 121 FAAACASAGITVLIGNDLRQCKENHCARYETATALAFLSWFMVSLSFILTFWLLATR 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL
Match: A0A6J1HME3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464894 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85
Identity = 166/177 (93.79%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF+FAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDND+GSCSENHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL
Match: A0A5D3C7L3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00260 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 167/177 (94.35%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHPVEDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLLLAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDNDLGSCS+NHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL
Match: A0A1S3CIU9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500904 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 167/177 (94.35%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHPVEDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLLLAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDNDLGSCS+NHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL
Match: A0A6J1HYU4 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469335 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 165/177 (93.22%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF+FAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDND+GSCSENHCVQFETATA+AFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAIAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL
Match: A0A6J1FCE7 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444123 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.4e-82
Identity = 161/177 (90.96%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           M+VSHATVHPVEDPPTTDG +APRVRMKDMEGMPGTRGGLALRFSQF+FAAAALVVMATT
Sbjct: 1   MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSV AFCYLVAAAGLQSLWSLLLA ID+YALLVRRSL+N RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVPAFCYLVAAAGLQSLWSLLLASIDIYALLVRRSLRNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAAC+SAGIT+LIDNDL SC ENHCVQFE ATAMAFISWF+ALPSFF+NFWSLASR
Sbjct: 121 FAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. NCBI nr
Match: XP_022964943.1 (CASP-like protein 5A2 [Cucurbita moschata] >XP_023519769.1 CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >XP_023519770.1 CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG7019283.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 166/177 (93.79%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF+FAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDND+GSCSENHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. NCBI nr
Match: XP_008462581.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0041694.1 CASP-like protein 5A2 [Cucumis melo var. makuwa] >TYK06316.1 CASP-like protein 5A2 [Cucumis melo var. makuwa])

HSP 1 Score: 322.4 bits (825), Expect = 2.4e-84
Identity = 167/177 (94.35%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHPVEDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLLLAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDNDLGSCS+NHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. NCBI nr
Match: XP_022970342.1 (CASP-like protein 5A2 [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 3.2e-84
Identity = 165/177 (93.22%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF+FAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDND+GSCSENHCVQFETATA+AFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAIAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. NCBI nr
Match: XP_038894237.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 7.9e-83
Identity = 163/177 (92.09%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHA+VHPVEDPPTTDGANAP VRMKD EGMPGTRGGLALRF QF FAAAALVVMATT
Sbjct: 1   MNVSHASVHPVEDPPTTDGANAPMVRMKDTEGMPGTRGGLALRFFQFFFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSV+AFCYLVAAAGLQS+WSLLLAFID+YALLVRRSLQN RIVSLFT+GDGITSTLT
Sbjct: 61  SDFPSVSAFCYLVAAAGLQSMWSLLLAFIDIYALLVRRSLQNCRIVSLFTVGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           FAAACASAGITVLIDNDL SCS+NHCVQFETATAMAFISWF ALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLSSCSKNHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Lcy10g004230 vs. NCBI nr
Match: KAG6583581.1 (CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAP VRMKDMEGMPGTRGGLALRF QF+FAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLV+RSLQN RIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFW 173
           FAAACASAGITVLIDND+GSCSENHCVQFETATAMAFISWF ALPSFF+NFW
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFW 172

[Close]

BLAST of Lcy10g004230 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-75
Identity = 145/179 (81.01%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MNVSHATVHPVEDPP--TTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVMA 60
           MNVSHA+VHPVEDPP   T+  N PRVRM DMEGMPGT  GLALRF QF+FAAAAL VMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITST 120
           +TSDFPSVTAFCYLVAA GLQSLWSL LA +DVYA++V+RSLQN R+VSLF IGDG+TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLASR 178
           LTFAAACASAGITVLIDNDL SC++NHCVQFET+TA+AFISWF ALPSF  NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Lcy10g004230 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 120/179 (67.04%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 1   MNVSHATVHPVED---PPTTDGANAPRVRMKDMEGMPGTRGGLALRFSQFVFAAAALVVM 60
           MNVS   +HPV+     PT    + P VRMKD++GMPGT GGL LR SQFV A  ++ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  ATTSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDVYALLVRRSLQNSRIVSLFTIGDGITS 120
            TTSDF S TAFC LV A  LQSLWSL L  ID YALLVRRSL+N  +V  FTIGDG+TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFAAACASAGITVLIDNDLGSCSENHCVQFETATAMAFISWFMALPSFFVNFWSLAS 177
           TLTFAAA ASAGITVLI NDLG C+ NHC +FETATAMAFISWF   PSF +NFWSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Lcy10g004230 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-31
Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFSQFVFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLLL 86
           M D+ G PGT  GL LR SQ VFAA ++  M T+  F S TAFCYL+AA GLQ +WS  L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 87  AFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDLGSCS-ENH 146
           A +D +AL+ +++L +  +VSLF +GD +TSTL+ A A +SAGITVL   DLGSCS E  
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 147 CVQFETATAMAFISWFMALPSFFVNFWSLAS 177
           C +++ + A+AF+ W     S     W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Lcy10g004230 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFSQFVFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLLL 86
           MK + G PGT  GL LR  Q   AAA++ VM +  +F   TAFCYL+A+ GLQ LWS  L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 87  AFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDLGSC---SE 146
           A +DVYAL  ++ LQN  +VSLF +GD +T+ L+ AAAC+SAG+ VL + D+  C   S+
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 147 NHCVQFETATAMAFISWFMALPSFFVNFWSLAS 177
             C+++E A A++F++W     S  V FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Lcy10g004230 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-28
Identity = 68/151 (45.03%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFSQFVFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLLL 86
           MK M G PGT  GL LR  Q   AAA++ VM ++ DF + TAFC+LVA+ GLQ +WS  L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 87  AFIDVYALLVRRSLQNSRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDLGSCSEN-- 146
           A +DVYA+  +  L++  ++SLFT+GD +T+ L  AAAC+SAG+TVL   D   C +   
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 147 -HCVQFETATAMAFISWFMALPSFFVNFWSL 175
             C +F+ +  ++F +WF+A  S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of Lcy10g004230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	2.4e-74	81.01	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
P0DI70	2.3e-61	70.06	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
Q10Q78	1.3e-59	68.36	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	8.2e-59	66.85	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
P0DI69	3.8e-56	63.84	CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1	[more]

BLAST of Lcy10g004230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HME3	5.3e-85	93.79	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464894 PE=3 SV=1	[more]
A0A5D3C7L3	1.2e-84	94.35	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00...	[more]
A0A1S3CIU9	1.2e-84	94.35	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500904 PE=3 SV=1	[more]
A0A6J1HYU4	1.5e-84	93.22	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469335 PE=3 SV=1	[more]
A0A6J1FCE7	9.4e-82	90.96	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444123 PE=3 SV=1	[more]

BLAST of Lcy10g004230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964943.1	1.1e-84	93.79	CASP-like protein 5A2 [Cucurbita moschata] >XP_023519769.1 CASP-like protein 5A2...	[more]
XP_008462581.1	2.4e-84	94.35	PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0041694.1 CASP-like protein ...	[more]
XP_022970342.1	3.2e-84	93.22	CASP-like protein 5A2 [Cucurbita maxima]	[more]
XP_038894237.1	7.9e-83	92.09	CASP-like protein 5A2 [Benincasa hispida]	[more]
KAG6583581.1	3.9e-82	93.60	CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy10g004230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	1.7e-75	81.01	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	1.8e-56	67.04	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	5.7e-31	49.67	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	2.2e-30	47.71	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	3.5e-28	45.03	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 34..161 e-value: 2.1E-27 score: 95.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 14..177
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 14..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g004230.1	Lcy10g004230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane