Lcy10g004040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g004040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr10: 8487737 .. 8488656 (-)
RNA-Seq Expression	Lcy10g004040
Synteny	Lcy10g004040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGTGATCATTAATTGAGAGGGTTTATGATTGATTTTCAGTGGAAGTGTGTTGAAGGAGAAGGGAAGTTAAAGAATACGAAAGAACCCACACCCCACATTCCGAAACACAAAACAAATGTGACAAAGAGGCAAAACCAGAGCCACAATCAGCAAAATCAAAGCCAGAAAACAAAAGGGGATCAAAAAACGGGTGAAATTAACAAACACTCACTGTGTACGACGAAGCCAAACCGCCTGACTGCTGCGCACGCAAAGGAAGAAGAAGACGATGCTGCCCGAGAGAACGAAAAGGTCGAACCGCTTGACTGCTGCGCACGCAAAGGAAGAAGAAGATGATGCTGCCCGAGAGAACGAAAAGGTCGAACCGTCTGACTGCTGCACACGCGAAGGAAGAAGAAGACGACGCTGCCGGAGAGAACGAGAATATGGCGCCGCAGAGAGGAGAAAAGACCGAGAGAGAGATAGAATGAGAAAATCAGAATTCTAAACCCTAAATCTGCGTCTACGTGTGCGTACTGCTTTATACTCGGTTCGGGCCAAAAAAATGCAAGGACCGAACCGAACCTTTCGGTTCGGTTCGGTTCAGTCACAAATAAACTTGAAAACCAAACCGAACCGAACCGAACCGAACCGGTTCGGTTCGGTTCGGCGGTTCGGTTCGGTTTTTTTCACCCCTATGGTTTGTATCCCCAAGTGGGAGTCTTTGTTTTTTAATGATATTCTCTATTCTCAAACAAAAAAAAAATGTCTTTTAGATATCTTTTCTCCCATTCAGTATCCACCACCCTTTCAATTTCTCAATAATAATTAAACATAAGTTTTCAGCTCTCGACCTTTCAAGTTCACTCCCTTTACTTTTTCTAACTTGTTTTAGGATAAAGAATTCACATTATTGCAAATTAAATACAACTTTTTAT

mRNA sequence

CTGTGTGATCATTAATTGAGAGGGTTTATGATTGATTTTCAGTGGAAGTGTGTTGAAGGAGAAGGGAAGTTAAAGAATACGAAAGAACCCACACCCCACATTCCGAAACACAAAACAAATGTGACAAAGAGGCAAAACCAGAGCCACAATCAGCAAAATCAAAGCCAGAAAACAAAAGGGGATCAAAAAACGGGTGAAATTAACAAACACTCACTGTGTACGACGAAGCCAAACCGCCTGACTGCTGCGCACGCAAAGGAAGAAGAAGACGATGCTGCCCGAGAGAACGAAAAGGTCGAACCGCTTGACTGCTGCGCACGCAAAGGAAGAAGAAGATGATGCTGCCCGAGAGAACGAAAAGGTCGAACCGTCTGACTGCTGCACACGCGAAGGAAGAAGAAGACGACGCTGCCGGAGAGAACGAGAATATGGCGCCGCAGAGAGGAGAAAAGACCGAGAGAGAGATAGAATGAGAAAATCAGAATTCTAAACCCTAAATCTGCGTCTACGTGTGCGTACTGCTTTATACTCGGTTCGGGCCAAAAAAATGCAAGGACCGAACCGAACCTTTCGGTTCGGTTCGGTTCAGTCACAAATAAACTTGAAAACCAAACCGAACCGAACCGAACCGAACCGGTTCGGTTCGGTTCGGCGGTTCGGTTCGGTTTTTTTCACCCCTATGGTTTGTATCCCCAAGTGGGAGTCTTTGTTTTTTAATGATATTCTCTATTCTCAAACAAAAAAAAAATGTCTTTTAGATATCTTTTCTCCCATTCAGTATCCACCACCCTTTCAATTTCTCAATAATAATTAAACATAAGTTTTCAGCTCTCGACCTTTCAAGTTCACTCCCTTTACTTTTTCTAACTTGTTTTAGGATAAAGAATTCACATTATTGCAAATTAAATACAACTTTTTAT

Coding sequence (CDS)

ATGATTGATTTTCAGTGGAAGTGTGTTGAAGGAGAAGGGAAGTTAAAGAATACGAAAGAACCCACACCCCACATTCCGAAACACAAAACAAATGTGACAAAGAGGCAAAACCAGAGCCACAATCAGCAAAATCAAAGCCAGAAAACAAAAGGGGATCAAAAAACGGGTGAAATTAACAAACACTCACTGTGTACGACGAAGCCAAACCGCCTGACTGCTGCGCACGCAAAGGAAGAAGAAGACGATGCTGCCCGAGAGAACGAAAAGGTCGAACCGCTTGACTGCTGCGCACGCAAAGGAAGAAGAAGATGA

Protein sequence

MIDFQWKCVEGEGKLKNTKEPTPHIPKHKTNVTKRQNQSHNQQNQSQKTKGDQKTGEINKHSLCTTKPNRLTAAHAKEEEDDAARENEKVEPLDCCARKGRRR

Homology

The following BLAST results are available for this feature:

BLAST of Lcy10g004040 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g004040 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g004040 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g004040 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g004040.1	Lcy10g004040.1	mRNA