Lcy10g003190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g003190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase
Location	Chr10: 5177535 .. 5178329 (+)
RNA-Seq Expression	Lcy10g003190
Synteny	Lcy10g003190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACATGTTGAAGATCTCCCTAATCAGCAAGCTCATGCACAGCCTGCACCTCCAGTGCAGGCGCAAACCGTCACTCTAACTTTAGAGGCCCTCCAGGCTCTTATGAATAATGCCGTTGCCAATCAGGCGCCCCAGGCAAACCAAAATGAGAACCAGGGTCAGATGGACTCAATTGTGGGGGCTCGGTGTCTGAAAGATTTTAAGAAGTACGACCCACCATCGTTTAGCGAGAAGACTGTGGACTCCACGGTGGCTGAAGCTTGGACTGTCACGATTGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGCACAACAGGTGCCGTGCACAAGATTTTTGCTAAAGGATGATGCCTTGTTGTGGTGAAGGTTGACTGAGAGATCCATCGATGTTAGCGCTGGTCCGGTCACATGGTTGCAGTTCAAGGAGGCGTTTTTCCAGAAGTACTACTTGGCCATTATCAGGTACAGAAAGGAGGTGGAGTTTCTAGCCTTGACGCAAGGAGAGAAGTCAGTGGAAGAAGAATATGAACTTGAGTTCACCCGACTATCCCGTTTTGCCACTGAAATGGTGGACACGGAGGTGAAGAAAACAAAGAGGTTCATCTTGGGCCTCAGAGACGACGTCCAGAAGGTCGTAGGGGCCCTTGCCCCAGCAGATTACGTAGCGGCCCTTCGAGCGACTACATTTATGGGTATGCCAGCTGCCAATGCCACTCCAGTGGCTAAGGAGTCGGAGGCCAACTCAGGACAAAAGAGGAAATTCGAGCAGACACACTACAACAATTAA

mRNA sequence

ATGGATCAACATGTTGAAGATCTCCCTAATCAGCAAGCTCATGCACAGCCTGCACCTCCAGTGCAGGCGCAAACCGTCACTCTAACTTTAGAGGCCCTCCAGGCTCTTATGAATAATGCCGTTGCCAATCAGGCGCCCCAGGCAAACCAAAATGAGAACCAGGGTCAGATGGACTCAATTGTGGGGGCTCGGTGTCTGAAAGATTTTAAGAAGTACGACCCACCATCGTTTAGCGAGAAGACTGTGGACTCCACGGTGGCTGAAGCTTGGACTGTCACGATTGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGCACAACAGTTCAAGGAGGCGTTTTTCCAGAAGTACTACTTGGCCATTATCAGGTACAGAAAGGAGGTGGAGTTTCTAGCCTTGACGCAAGGAGAGAAGTCAGTGGAAGAAGAATATGAACTTGAGTTCACCCGACTATCCCGTTTTGCCACTGAAATGGTGGACACGGAGGTGAAGAAAACAAAGAGGTTCATCTTGGGCCTCAGAGACGACGTCCAGAAGGTCGTAGGGGCCCTTGCCCCAGCAGATTACGTAGCGGCCCTTCGAGCGACTACATTTATGGGTATGCCAGCTGCCAATGCCACTCCAGTGGCTAAGGAGTCGGAGGCCAACTCAGGACAAAAGAGGAAATTCGAGCAGACACACTACAACAATTAA

Coding sequence (CDS)

ATGGATCAACATGTTGAAGATCTCCCTAATCAGCAAGCTCATGCACAGCCTGCACCTCCAGTGCAGGCGCAAACCGTCACTCTAACTTTAGAGGCCCTCCAGGCTCTTATGAATAATGCCGTTGCCAATCAGGCGCCCCAGGCAAACCAAAATGAGAACCAGGGTCAGATGGACTCAATTGTGGGGGCTCGGTGTCTGAAAGATTTTAAGAAGTACGACCCACCATCGTTTAGCGAGAAGACTGTGGACTCCACGGTGGCTGAAGCTTGGACTGTCACGATTGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGCACAACAGTTCAAGGAGGCGTTTTTCCAGAAGTACTACTTGGCCATTATCAGGTACAGAAAGGAGGTGGAGTTTCTAGCCTTGACGCAAGGAGAGAAGTCAGTGGAAGAAGAATATGAACTTGAGTTCACCCGACTATCCCGTTTTGCCACTGAAATGGTGGACACGGAGGTGAAGAAAACAAAGAGGTTCATCTTGGGCCTCAGAGACGACGTCCAGAAGGTCGTAGGGGCCCTTGCCCCAGCAGATTACGTAGCGGCCCTTCGAGCGACTACATTTATGGGTATGCCAGCTGCCAATGCCACTCCAGTGGCTAAGGAGTCGGAGGCCAACTCAGGACAAAAGAGGAAATTCGAGCAGACACACTACAACAATTAA

Protein sequence

MDQHVEDLPNQQAHAQPAPPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGARCLKDFKKYDPPSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEAQQFKEAFFQKYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDVQKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANSGQKRKFEQTHYNN

Homology

[Close]

BLAST of Lcy10g003190 vs. ExPASy TrEMBL
Match: A0A6J1DSJ6 (uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023512 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.9e-30
Identity = 91/214 (42.52%), Postives = 117/214 (54.67%), Query Frame = 0


Query: 30  LEALQALMNNAVANQAPQANQNENQGQMDSIVGARCLKDFKKYDPPSFSEKTVDSTVAEA 89
           +E LQ L+   V+NQ  Q  QN     ++    A+ L+DFKKYDP SF   +VD  +AEA
Sbjct: 1   METLQTLVQTTVSNQMTQLTQNRGSISIE----AKYLRDFKKYDPRSFDGLSVDPMLAEA 60

Query: 90  WTVTIEEIFRYMGCPEAQ----------------------------------QFKEAFFQ 149
           W   +E IFRYM C E Q                                  QFKEAFFQ
Sbjct: 61  WLSLMETIFRYMRCLEEQKVQCDVFMLKDDAFLWWESTERPIDVSGGPVTWLQFKEAFFQ 120

Query: 150 KYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRD 209
           +YY AI  YRK+VEFL L Q  +SV EEY+ EFT+LSRFA E+VDTE  K +RFI+ L+D
Sbjct: 121 QYYPAITWYRKQVEFLNLKQDNRSV-EEYDREFTKLSRFAPELVDTEATKCERFIIDLKD 180

[Close]

BLAST of Lcy10g003190 vs. ExPASy TrEMBL
Match: A0A6J1EKD9 (uncharacterized protein LOC111435460 OS=Cucurbita moschata OX=3662 GN=LOC111435460 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-26
Identity = 95/248 (38.31%), Postives = 122/248 (49.19%), Query Frame = 0


Query: 18  APPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGAR---CLKDFKKYDP 77
           APP     V L+ EA Q L+  A ANQ       E +G  DS    R    L+DF+KYDP
Sbjct: 45  APP--PNMVMLSTEAYQKLIQAAAANQ-------EGRGDDDSTSMTREFKYLRDFRKYDP 104

Query: 78  PSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEAQ--------------------------- 137
           P F  KT+D  + E+W  +IE IF +M CPE Q                           
Sbjct: 105 PVFEGKTIDPVLVESWVESIETIFEHMNCPEDQKVKCASFMLKGEAHFWWKTAQQTLRKE 164

Query: 138 ----------QFKEAFFQKYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATE 197
                     + K AF  KYY A+  Y     F+ L QG  +V EEYELEFTRLSRFA E
Sbjct: 165 DEDEEPICWHEMKRAFIHKYYPAVNWYNNREAFVHLKQGNMTV-EEYELEFTRLSRFALE 224

Query: 198 MVDTEVKKTKRFILGLRDDVQKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANS 226
            +DTE K+T +FILGLR ++Q  V A+A   Y  AL A + +      A+    E E + 
Sbjct: 225 YIDTEEKRTYKFILGLRSEIQGKVAAIAATSYERALHAASMLDFHLRKASN-ELEDEGSY 281

[Close]

BLAST of Lcy10g003190 vs. ExPASy TrEMBL
Match: A0A5A7SRD1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00070 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.2e-24
Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 63  ARCLKDFKKYDPPSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEA-----QQFKEAFFQKY 122
           A+ L+DF+KY+P +F     D T A+ W  ++E IFRYM CPE      QQFKE+F+ K+
Sbjct: 217 AKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKITWQQFKESFYTKF 276

Query: 123 YLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDV 182
           + A +R  K  EFL L Q + +V E+Y+ EF  LSRFA EM+ TE  +  +F+ GLR D+
Sbjct: 277 FSASLRDAKRQEFLNLEQSDMTV-EQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI 336

Query: 183 QKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANSGQKRKFEQ 226
           Q +V A  PA Y  ALR    + +     +       + SGQKRK EQ
Sbjct: 337 QGLVRAFRPATYADALRLAVDLSLQERANSSKTDGRGSTSGQKRKAEQ 383

[Close]

BLAST of Lcy10g003190 vs. ExPASy TrEMBL
Match: A0A5A7VBW8 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00050 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 87/223 (39.01%), Postives = 120/223 (53.81%), Query Frame = 0


Query: 9   PNQQAHAQPAPPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGARCLKD 68
           P  +   QPAPP  A        A       A    APQ   ++   +      A+ L+D
Sbjct: 42  PEMREQQQPAPPAPAPA-----PAPAPAPAPAPVPVAPQVVPDQLSAE------AKHLRD 101

Query: 69  FKKYDPPSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEA-----QQFKEAFFQKYYLAIIR 128
           F+KY+P +F     D T A+ W  ++E IFRYM CPE      QQFKE+F+ K++ A +R
Sbjct: 102 FRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKITWQQFKESFYAKFFSASLR 161

Query: 129 YRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDVQKVVGA 188
             K  EFL L QG+ +V E+Y+ EF  LSRFA EM+ TE  +  +F+ GLR D+Q +V A
Sbjct: 162 DAKRQEFLNLEQGDMTV-EQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRA 221

Query: 189 LAPADYVAALRATTFMGM-PAANATPVAKESEANSGQKRKFEQ 226
             PA +  ALR    + +   AN++  A    + SGQKRK EQ
Sbjct: 222 FRPATHADALRLAVDLSLQERANSSKTAGRG-STSGQKRKAEQ 251

[Close]

BLAST of Lcy10g003190 vs. ExPASy TrEMBL
Match: A0A5D3BYD1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold676G00110 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.5e-23
Identity = 86/220 (39.09%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 12  QAHAQPAPPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGARCLKDFKK 71
           +A  QPAPP  A        A       A    APQ   ++   +      A+ L+DF+K
Sbjct: 2   RAQQQPAPPAPAPA-----PAPAPTPAPAPVPVAPQVVPDQLSAE------AKHLRDFRK 61

Query: 72  YDPPSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEA-----QQFKEAFFQKYYLAIIRYRK 131
           Y+P +      D T A+ W  ++E IFRYM CP+      QQFKE+F+ K++ A +R  K
Sbjct: 62  YNPTTLDGSLEDPTRAQLWLSSLETIFRYMKCPDDQKITWQQFKESFYAKFFSASLRDAK 121

Query: 132 EVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDVQKVVGALAP 191
             EFL L QG+ +V E+Y  EF  LSRFA EM+ TE  +  +F+ GLR D+Q +V A  P
Sbjct: 122 RQEFLNLEQGDMTV-EQYGAEFVMLSRFAPEMIATEAVRADKFVRGLRLDIQGLVRAFRP 181

Query: 192 ADYVAALRATTFMGMP-AANATPVAKESEANSGQKRKFEQ 226
           A +  ALR    + +P  AN++  A    + SGQKRK EQ
Sbjct: 182 ATHADALRLAVDLSLPERANSSKTAGRG-STSGQKRKAEQ 208

[Close]

BLAST of Lcy10g003190 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-29
Identity = 91/214 (42.52%), Postives = 117/214 (54.67%), Query Frame = 0


Query: 30  LEALQALMNNAVANQAPQANQNENQGQMDSIVGARCLKDFKKYDPPSFSEKTVDSTVAEA 89
           +E LQ L+   V+NQ  Q  QN     ++    A+ L+DFKKYDP SF   +VD  +AEA
Sbjct: 1   METLQTLVQTTVSNQMTQLTQNRGSISIE----AKYLRDFKKYDPRSFDGLSVDPMLAEA 60

Query: 90  WTVTIEEIFRYMGCPEAQ----------------------------------QFKEAFFQ 149
           W   +E IFRYM C E Q                                  QFKEAFFQ
Sbjct: 61  WLSLMETIFRYMRCLEEQKVQCDVFMLKDDAFLWWESTERPIDVSGGPVTWLQFKEAFFQ 120

Query: 150 KYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRD 209
           +YY AI  YRK+VEFL L Q  +SV EEY+ EFT+LSRFA E+VDTE  K +RFI+ L+D
Sbjct: 121 QYYPAITWYRKQVEFLNLKQDNRSV-EEYDREFTKLSRFAPELVDTEATKCERFIIDLKD 180

[Close]

BLAST of Lcy10g003190 vs. NCBI nr
Match: XP_022928602.1 (uncharacterized protein LOC111435460 [Cucurbita moschata])

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-26
Identity = 95/248 (38.31%), Postives = 122/248 (49.19%), Query Frame = 0


Query: 18  APPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGAR---CLKDFKKYDP 77
           APP     V L+ EA Q L+  A ANQ       E +G  DS    R    L+DF+KYDP
Sbjct: 45  APP--PNMVMLSTEAYQKLIQAAAANQ-------EGRGDDDSTSMTREFKYLRDFRKYDP 104

Query: 78  PSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEAQ--------------------------- 137
           P F  KT+D  + E+W  +IE IF +M CPE Q                           
Sbjct: 105 PVFEGKTIDPVLVESWVESIETIFEHMNCPEDQKVKCASFMLKGEAHFWWKTAQQTLRKE 164

Query: 138 ----------QFKEAFFQKYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATE 197
                     + K AF  KYY A+  Y     F+ L QG  +V EEYELEFTRLSRFA E
Sbjct: 165 DEDEEPICWHEMKRAFIHKYYPAVNWYNNREAFVHLKQGNMTV-EEYELEFTRLSRFALE 224

Query: 198 MVDTEVKKTKRFILGLRDDVQKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANS 226
            +DTE K+T +FILGLR ++Q  V A+A   Y  AL A + +      A+    E E + 
Sbjct: 225 YIDTEEKRTYKFILGLRSEIQGKVAAIAATSYERALHAASMLDFHLRKASN-ELEDEGSY 281

[Close]

BLAST of Lcy10g003190 vs. NCBI nr
Match: XP_023543569.1 (uncharacterized protein LOC111803417 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-25
Identity = 93/248 (37.50%), Postives = 120/248 (48.39%), Query Frame = 0


Query: 18  APPVQAQTVTLTLEALQALMNNAVANQAPQANQNENQGQMDSIVGAR---CLKDFKKYDP 77
           APP     V L++EA + L+  A ANQ       E +G  DS    R    L+DF KYDP
Sbjct: 29  APP--PNMVMLSMEAYRKLIQAAAANQ-------EGRGDDDSTSMTREFKYLRDFGKYDP 88

Query: 78  PSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEAQ--------------------------- 137
           P F  KT+D  + E+W  + E IF +M CPE Q                           
Sbjct: 89  PVFEGKTIDPVLVESWVESTETIFEHMNCPEDQKVKCASFMLKGEAHFWWKTAQQTLRKE 148

Query: 138 ----------QFKEAFFQKYYLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATE 197
                     + K AF  KYY A+  Y     FL L QG  +V EEYELEFTRLSRFA E
Sbjct: 149 DEDEEPICWHEMKRAFIHKYYPAVYWYNNREAFLHLKQGNMTV-EEYELEFTRLSRFALE 208

Query: 198 MVDTEVKKTKRFILGLRDDVQKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANS 226
            +DTE K+T +FILGLR ++Q  V A+A   Y  AL A + +      A+    E + + 
Sbjct: 209 YIDTEEKRTYKFILGLRSEIQGKVAAIAATSYARALHAASILDFHLQKASN-ELEDQGSY 265

[Close]

BLAST of Lcy10g003190 vs. NCBI nr
Match: XP_038891712.1 (uncharacterized protein LOC120081110 [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 84/223 (37.67%), Postives = 114/223 (51.12%), Query Frame = 0


Query: 43  NQAPQA---NQNENQGQMDSIVGARCLKDFKKYDPPSFSEKTVDSTVAEAWTVTIEEIFR 102
           +Q PQ    N  +NQ      V A+ L+DFKKY+P +F+    D T AE W   IE IFR
Sbjct: 22  DQVPQVQTQNMIQNQSMSGFSVEAKHLRDFKKYNPSTFNGSLKDPTNAELWISFIETIFR 81

Query: 103 YMGCPEAQ----------------------------------QFKEAFFQKYYLAIIRYR 162
           YM CPE Q                                  QFKE F+ KY+ A +RY 
Sbjct: 82  YMKCPEDQKVQCAVFMLSDKAQIWWQLAERMLGVGGDPVTWEQFKERFYAKYFSANLRYN 141

Query: 163 KEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDVQKVVGALA 222
           K+ EFL L QG +SV EEY+ EF  LSRFA E+V TE  + +RFI GL++ ++ +V A  
Sbjct: 142 KQREFLELRQGHRSV-EEYDQEFDALSRFAPELVATEAMRAERFIQGLKESIRGIVQAFK 201

Query: 223 PADYVAALRATTFMGMPAANATPVAKESEANSGQKRKFEQTHY 229
           P  +V ALR    +   + +   +   +  +SGQKRK +Q  +
Sbjct: 202 PTTHVEALRLAAEVDPQSGDEFSLVFGAGPSSGQKRKADQKDF 243

[Close]

BLAST of Lcy10g003190 vs. NCBI nr
Match: KAA0032111.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-23
Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 63  ARCLKDFKKYDPPSFSEKTVDSTVAEAWTVTIEEIFRYMGCPEA-----QQFKEAFFQKY 122
           A+ L+DF+KY+P +F     D T A+ W  ++E IFRYM CPE      QQFKE+F+ K+
Sbjct: 217 AKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKITWQQFKESFYTKF 276

Query: 123 YLAIIRYRKEVEFLALTQGEKSVEEEYELEFTRLSRFATEMVDTEVKKTKRFILGLRDDV 182
           + A +R  K  EFL L Q + +V E+Y+ EF  LSRFA EM+ TE  +  +F+ GLR D+
Sbjct: 277 FSASLRDAKRQEFLNLEQSDMTV-EQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI 336

Query: 183 QKVVGALAPADYVAALRATTFMGMPAANATPVAKESEANSGQKRKFEQ 226
           Q +V A  PA Y  ALR    + +     +       + SGQKRK EQ
Sbjct: 337 QGLVRAFRPATYADALRLAVDLSLQERANSSKTDGRGSTSGQKRKAEQ 383

The following BLAST results are available for this feature:

BLAST of Lcy10g003190 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g003190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSJ6	4.9e-30	42.52	uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1EKD9	3.3e-26	38.31	uncharacterized protein LOC111435460 OS=Cucurbita moschata OX=3662 GN=LOC1114354...	[more]
A0A5A7SRD1	5.2e-24	42.86	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7VBW8	1.5e-23	39.01	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3BYD1	7.5e-23	39.09	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Lcy10g003190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156662.1	1.0e-29	42.52	uncharacterized protein LOC111023512 [Momordica charantia]	[more]
XP_022928602.1	6.7e-26	38.31	uncharacterized protein LOC111435460 [Cucurbita moschata]	[more]
XP_023543569.1	4.4e-25	37.50	uncharacterized protein LOC111803417 [Cucurbita pepo subsp. pepo]	[more]
XP_038891712.1	1.7e-24	37.67	uncharacterized protein LOC120081110 [Benincasa hispida]	[more]
KAA0032111.1	1.1e-23	42.86	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy10g003190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 108..175 e-value: 6.9E-6 score: 26.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 84..205
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 84..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g003190.1	Lcy10g003190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016787	hydrolase activity