Lcy10g000100 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g000100
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Non-specific lipid-transfer protein
Location	Chr10: 188701 .. 189030 (-)
RNA-Seq Expression	Lcy10g000100
Synteny	Lcy10g000100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGGGTGGCAATAGTGATGGCATCATGCTTGTTGGCGGGCGGCGTGGAGGCGGCGGTGAGTTGCGGGCAGGTGACGGAGTGGCTGACCCCTTGCATCAGCTACGCGTTCTATGGAGGGAAGGTGGCGGCGGAATGCTGCTCTGGCATTAAGAGCCTGATTTCGGCTTCGACCACCACCGAAGACCGGAGAAATGCATGTACCTGCATTAAGAATGCCGTTTCCGCAATGCCCGGAATCAACTACGATCTCGTCGCCAAGCTTCCGGAGAAATGCGGCACCACTGTTCCCTACACGATCAGCCCTTCTACCGACTGCTCCAAGTAA

mRNA sequence

ATGGTGGGGGTGGCAATAGTGATGGCATCATGCTTGTTGGCGGGCGGCGTGGAGGCGGCGGTGAGTTGCGGGCAGGTGACGGAGTGGCTGACCCCTTGCATCAGCTACGCGTTCTATGGAGGGAAGGTGGCGGCGGAATGCTGCTCTGGCATTAAGAGCCTGATTTCGGCTTCGACCACCACCGAAGACCGGAGAAATGCATGTACCTGCATTAAGAATGCCGTTTCCGCAATGCCCGGAATCAACTACGATCTCGTCGCCAAGCTTCCGGAGAAATGCGGCACCACTGTTCCCTACACGATCAGCCCTTCTACCGACTGCTCCAAGTAA

Coding sequence (CDS)

ATGGTGGGGGTGGCAATAGTGATGGCATCATGCTTGTTGGCGGGCGGCGTGGAGGCGGCGGTGAGTTGCGGGCAGGTGACGGAGTGGCTGACCCCTTGCATCAGCTACGCGTTCTATGGAGGGAAGGTGGCGGCGGAATGCTGCTCTGGCATTAAGAGCCTGATTTCGGCTTCGACCACCACCGAAGACCGGAGAAATGCATGTACCTGCATTAAGAATGCCGTTTCCGCAATGCCCGGAATCAACTACGATCTCGTCGCCAAGCTTCCGGAGAAATGCGGCACCACTGTTCCCTACACGATCAGCCCTTCTACCGACTGCTCCAAGTAA

Protein sequence

MVGVAIVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK

Homology

[Close]

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 4.8e-25
Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MVGVAIVMASCLLAG--GVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISAS 60
           +V VA+V A+ LLAG     AA+SCGQV   ++PC+SYA  G   +A CCSG++SL SA+
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 65

Query: 61  TTTEDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
           +TT DRR AC C+KN   ++ G+N    A +P KCG ++PYTISPS DCS
Sbjct: 66  STTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115

[Close]

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.8e-25
Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MVGVAIVMASCLLAG--GVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISAS 60
           +V VA+V A+ LLAG     AA+SCGQV   ++PC+SYA  G   +A CCSG++SL SA+
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 65

Query: 61  TTTEDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
           +TT DRR AC C+KN   ++ G+N    A +P KCG ++PYTISPS DCS
Sbjct: 66  STTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115

[Close]

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-24
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MVGVAIVMASCLLAG--GVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISAS 60
           +V VA+V A+ LLAG     AA+SCGQV   ++PC+SYA  G   +A CCSG++SL SA+
Sbjct: 6   LVLVALV-AALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 65

Query: 61  TTTEDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
           TTT DRR AC C+KN   ++ G+N    A +P KCG ++PYTISPS DCS
Sbjct: 66  TTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 114

[Close]

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot
Match: Q39950 (Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 10  SCLLAGG-VEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRRNAC 69
           +C++ G     A+SCGQV+  L PCISY   GG V   CCSG+KSL SA+ TT DR+ AC
Sbjct: 14  TCMVVGAPYTEALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAAC 73

Query: 70  TCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
            C+K+A +++ G+N    A  P KCG ++PY ISPSTDCSK
Sbjct: 74  GCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSK 114

[Close]

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 1   MVGVAIVMASCLLAGGVEAAVSCGQVTEWLTPCISYA-FYGGKVAAECCSGIKSLISAST 60
           +V  A+V    L A   EAA+SCGQV   + PCISYA   G   +A CCSG++SL +A+ 
Sbjct: 9   VVATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAAR 68

Query: 61  TTEDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           TT DRR AC C+KNA + + G+N    A +P KCG ++PYTIS STDCS+
Sbjct: 69  TTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR 118

[Close]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL
Match: A0A2N9HI55 (AAI domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15552 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.7e-26
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 11  CLL--AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRRNAC 70
           C+L  A  V+A ++C +VT  LTPCI+YA +GG V   CC GIK+L +AS TTED R +C
Sbjct: 19  CMLVAAAHVDATITCAEVTNLLTPCINYAIFGGTVPPACCDGIKALNAASNTTEDHRTSC 78

Query: 71  TCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           +CI + +S +PGINY+LV  LPE CGTT PY I+P+TDCSK
Sbjct: 79  SCIMDGLSKIPGINYELVGTLPETCGTTCPYKITPTTDCSK 119

[Close]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL
Match: A0A2N9HZ63 (AAI domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44916 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.7e-26
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 11  CLL--AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRRNAC 70
           C+L  A  V+A ++C +VT  LTPCI+YA +GG V   CC GIK+L +AS TTED R +C
Sbjct: 19  CMLVAAAHVDATITCAEVTNLLTPCINYAIFGGTVPPACCDGIKALNAASNTTEDHRTSC 78

Query: 71  TCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           +CI + +S +PGINY+LV  LPE CGTT PY I+P+TDCSK
Sbjct: 79  SCIMDGLSKIPGINYELVGTLPETCGTTCPYKITPTTDCSK 119

[Close]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL
Match: A0A7N2M8H3 (AAI domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.0e-25
Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 5   AIVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 64
           A+++   ++A  V+A+++C +VT  LTPCISYA +GG V   CC GIK+L +AS TT+D 
Sbjct: 14  AVLVCMLVVASHVDASLTCAEVTNLLTPCISYAIFGGTVPPACCEGIKALNAASNTTQDH 73

Query: 65  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R AC+CI + +S +PGINY+LV  LP+ CGTT  Y I+P+TDCSK
Sbjct: 74  RAACSCIMDGLSKIPGINYELVGTLPQTCGTTCSYKITPTTDCSK 118

[Close]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL
Match: A0A6A1WKJ6 (Non-specific lipid-transfer protein OS=Morella rubra OX=262757 GN=CJ030_MR1G009141 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.5e-25
Identity = 56/104 (53.85%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 6   IVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRR 65
           +++A  +++  V A+++CG++T+ LTPCISYA  GG V  +CC GI +L +AS TTED R
Sbjct: 11  LLLAMLVVSARVHASLTCGEITKLLTPCISYAMVGGAVPPDCCKGIYALNAASNTTEDHR 70

Query: 66  NACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
            AC+CIK+ +S +PGINY LVA LP+ C TT  YTI+P+ DCSK
Sbjct: 71  AACSCIKDGLSKIPGINYHLVATLPQACNTTCSYTITPTVDCSK 114

[Close]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL
Match: A0A7N2KNG1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.5e-25
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 7   VMASCLL--AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 66
           V+ +C+L  +  V+A+++C +VT  LTPCISYA +GG V   CC G+K++ + STT ED 
Sbjct: 14  VLLACMLVFSAHVDASITCAEVTTLLTPCISYAIFGGTVPQACCEGVKAVHAGSTTVEDH 73

Query: 67  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R  C+CI + +S +PGINYDLV  LPE CGTT  Y I+P+TDCSK
Sbjct: 74  RATCSCIMDGISRIPGINYDLVGTLPETCGTTCTYKITPTTDCSK 118

[Close]

BLAST of Lcy10g000100 vs. NCBI nr
Match: KAF3454803.1 (hypothetical protein FNV43_RR05251 [Rhamnella rubrinervis])

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-25
Identity = 64/108 (59.26%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 2   VGVAIVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTT 61
           V V   M   L A  VEA ++CGQVT+ LTPCISYA  GG VA ECC+GIK L +   TT
Sbjct: 11  VEVITCMLLMLAASRVEATITCGQVTQLLTPCISYAVLGGDVAPECCAGIKELHAIKITT 70

Query: 62  EDRRNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           ED R ACTCIK   + +PGI+Y+ V +LP KCGTT PY I PSTDCS+
Sbjct: 71  EDIRAACTCIKQGAAMIPGIDYERVNQLPAKCGTTSPYKIYPSTDCSR 118

[Close]

BLAST of Lcy10g000100 vs. NCBI nr
Match: KAF3960534.1 (hypothetical protein CMV_014757 [Castanea mollissima])

HSP 1 Score: 124.8 bits (312), Expect = 4.6e-25
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 5   AIVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 64
           A+++   ++A  V+A ++C +VT  LTPCISYA +GG V   CC GIK+L +AS TT+D 
Sbjct: 14  AVLVCMLVVASHVDATITCAEVTTLLTPCISYAIFGGTVPPACCEGIKALNAASNTTQDH 73

Query: 65  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R AC+CI + +S +PGINY+LV  LPE CGTT  Y I+P+TDCSK
Sbjct: 74  RAACSCIMDGLSKIPGINYELVGTLPETCGTTCSYKITPTTDCSK 118

[Close]

BLAST of Lcy10g000100 vs. NCBI nr
Match: XP_030926411.1 (non-specific lipid-transfer protein 1-like isoform X1 [Quercus lobata] >XP_030926412.1 non-specific lipid-transfer protein 1-like isoform X2 [Quercus lobata])

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24
Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 5   AIVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 64
           A+++   ++A  V+A+++C +VT  LTPCISYA +GG V   CC GIK+L +AS TT+D 
Sbjct: 14  AVLVCMLVVASHVDASLTCAEVTNLLTPCISYAIFGGTVPPACCEGIKALNAASNTTQDH 73

Query: 65  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R AC+CI + +S +PGINY+LV  LP+ CGTT  Y I+P+TDCSK
Sbjct: 74  RAACSCIMDGLSKIPGINYELVGTLPQTCGTTCSYKITPTTDCSK 118

[Close]

BLAST of Lcy10g000100 vs. NCBI nr
Match: XP_023893134.1 (non-specific lipid-transfer protein 1-like [Quercus suber])

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 7   VMASCLL--AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 66
           V+ +C+L  +  V+A+++C +VT  LTPCISYA +GG V   CC G+K++ + STT ED 
Sbjct: 14  VLLACMLVFSAHVDASITCAEVTTLLTPCISYAIFGGTVPQACCEGVKAVHAGSTTVEDH 73

Query: 67  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R  C+CI + +S +PGINYDLV  LPE CGTT  Y I+P+TDCSK
Sbjct: 74  RATCSCIMDGISRIPGINYDLVGTLPETCGTTCTYKITPTTDCSK 118

[Close]

BLAST of Lcy10g000100 vs. NCBI nr
Match: XP_030969157.1 (non-specific lipid-transfer protein 1-like [Quercus lobata])

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 7   VMASCLL--AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDR 66
           V+ +C+L  +  V+A+++C +VT  LTPCISYA +GG V   CC G+K++ + STT ED 
Sbjct: 45  VLLACMLVFSAHVDASITCAEVTTLLTPCISYAIFGGTVPQACCEGVKAVHAGSTTVEDH 104

Query: 67  RNACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCSK 110
           R  C+CI + +S +PGINYDLV  LPE CGTT  Y I+P+TDCSK
Sbjct: 105 RATCSCIMDGISRIPGINYDLVGTLPETCGTTCTYKITPTTDCSK 149

[Close]

BLAST of Lcy10g000100 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 97.1 bits (240), Expect = 9.6e-21
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 6   IVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRR 65
           +V+  C++A  V+AA+SCG V   L PC +Y   GG V   CC+G+K+L S + TT DR+
Sbjct: 11  LVLTVCIVA-SVDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQ 70

Query: 66  NACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
            AC CI++   ++ G+N  L + LP KCG ++PY IS ST+C+
Sbjct: 71  QACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCN 112

[Close]

BLAST of Lcy10g000100 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 91.3 bits (225), Expect = 5.3e-19
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 6   IVMASCLLAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRR 65
           +++ +  +A   E+ + CG VT  L  C++Y    G + ++CC G+KSL   + TT DR+
Sbjct: 11  LIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRK 70

Query: 66  NACTCIKNAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDC 108
             C C+K A   + G+N DLVA LP  CG ++PY IS ST+C
Sbjct: 71  QVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112

[Close]

BLAST of Lcy10g000100 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 13  LAGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTTTEDRRNACTCIK 72
           +   V+AA++CG V   L+PC+ Y   GG V   CC+G+K L   + TT DR+ AC C++
Sbjct: 17  IVASVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQ 76

Query: 73  NAVSAMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
              SA  G+N  L + LP KCG ++PY IS ST+C+
Sbjct: 77  ---SAAKGVNPSLASGLPGKCGVSIPYPISTSTNCA 109

[Close]

BLAST of Lcy10g000100 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 4   VAIVMASCLLAGG---VEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTT 63
           +A ++ +C++  G     AA+SCG V   L  CI Y   GG +   CCSG+K+L S + T
Sbjct: 7   LACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKT 66

Query: 64  TEDRRNACTCIKNAVSAM-PGINYDLVAKLPEKCGTTVPYTISPSTDC 108
           T DR+ AC CI+ A  A+  G+N    A +P+ CG  +PY IS ST+C
Sbjct: 67  TPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNC 114

[Close]

BLAST of Lcy10g000100 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-16
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 6   IVMASCLL-----AGGVEAAVSCGQVTEWLTPCISYAFYGGKVAAECCSGIKSLISASTT 65
           +V+  CLL     A G EAA+SC  V   L PC+ Y   GG +   CC+GI+ L   +T+
Sbjct: 4   VVLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATS 63

Query: 66  TEDRRNACTCIKNAVS--AMPGINYDLVAKLPEKCGTTVPYTISPSTDCS 109
             D++  C CIK+ V   +   I     A LP KCG  +PY I PST+C+
Sbjct: 64  ASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCN 113

The following BLAST results are available for this feature:

BLAST of Lcy10g000100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJ39	4.8e-25	52.73	Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2ZAT0	4.8e-25	52.73	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2QYL2	3.1e-24	53.64	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q39950	1.5e-23	52.48	Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P19656	1.5e-23	50.91	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]

BLAST of Lcy10g000100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HI55	7.7e-26	57.43	AAI domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15552 PE=3...	[more]
A0A2N9HZ63	7.7e-26	57.43	AAI domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44916 PE=3...	[more]
A0A7N2M8H3	5.0e-25	53.33	AAI domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A6A1WKJ6	6.5e-25	53.85	Non-specific lipid-transfer protein OS=Morella rubra OX=262757 GN=CJ030_MR1G0091...	[more]
A0A7N2KNG1	6.5e-25	53.33	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Lcy10g000100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3454803.1	1.6e-25	59.26	hypothetical protein FNV43_RR05251 [Rhamnella rubrinervis]	[more]
KAF3960534.1	4.6e-25	54.29	hypothetical protein CMV_014757 [Castanea mollissima]	[more]
XP_030926411.1	1.0e-24	53.33	non-specific lipid-transfer protein 1-like isoform X1 [Quercus lobata] >XP_03092...	[more]
XP_023893134.1	1.3e-24	53.33	non-specific lipid-transfer protein 1-like [Quercus suber]	[more]
XP_030969157.1	1.3e-24	53.33	non-specific lipid-transfer protein 1-like [Quercus lobata]	[more]

BLAST of Lcy10g000100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59320.1	9.6e-21	44.66	lipid transfer protein 3	[more]
AT3G51590.1	5.3e-19	40.20	lipid transfer protein 12	[more]
AT5G59310.1	1.2e-18	43.75	lipid transfer protein 4	[more]
AT2G38540.1	2.0e-18	41.67	lipid transfer protein 1	[more]
AT5G01870.1	3.2e-16	40.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 22..38 score: 50.23 coord: 80..97 score: 40.0 coord: 98..109 score: 62.18 coord: 42..56 score: 40.82 coord: 63..78 score: 44.62
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 2..109
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 23..107 e-value: 1.7E-9 score: 47.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 23..107 e-value: 1.7E-6 score: 28.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 20..109 e-value: 3.3E-29 score: 103.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 21..109
None	No IPR available	PANTHER	PTHR33076:SF46	LIPID TRANSFER PROTEIN	coord: 2..109
None	No IPR available	CDD	cd01960	nsLTP1	coord: 21..108 e-value: 5.02801E-33 score: 108.591

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g000100.1	Lcy10g000100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding