Lcy09g020490 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g020490
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMitochondrial ribosomal protein L37
LocationChr09: 45854088 .. 45858136 (+)
RNA-Seq ExpressionLcy09g020490
SyntenyLcy09g020490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGAAAACCCCTTTGGTCTCTCTCTCCCCCGATTTTCCCCTCTCTCAAATCCCTTTCCTCTCTCGATTACCCGTCGGCTTCCCTCCCCTCTGCGATCTCTCATTCTGACCATCGTCCGGCGAGCCCAGCAGCGCCAGACTTGTGATATTCTTCCCTTCCGGCGAGTCCTCAGCAGGTTCCGGCGTCGTTCTTCTTCCCTTCTCTTCCTAGTGATCTTCTCCTCTTTTAAGGTAACAAGGCTCTGTCTCTCTTCTCTCTCTCTAAATTGTGAGTTTGTGTGCGTATTTGTGTGTGTTTCAAGAAAGCAAAATTAAACCAAAATCCAAGACTGACCCAACTTGTTGAAGGGCATTTGTTCTATTGGTCACCCACTCAAACTGCTTTATTCTCTTTCTCTCTCTAGAATGGTCAGTAAAGTTAGGTTTGAACTTTGATGTAGGATAGAGAACAGAAAAACAGTGGAACAAAGGAGAAAATTAGGCCTTGTGTATGTGTGTGTGAAGAGAAATTTTTGTTTCCTCAAGTATATTATATTGATTTCAAGATTGAAACTTTTAGTTTAGAGAGAGACACAAGGAGTGGCCAAGTAAGTATGTTTAAGAGATGGTTAGAAAGAGAGGGATTAAGGAGGAGGGTGTGAAGAGAAATTGCCATTAATTACTCCGAGGAACTTCCATGAATGAAATTGTCCTATATTCAACTTTGACAGTGATGAGAAAATTGCCTTGCCTTCTCAGCCTTTTGCTGGACTCGAACTTCCCCTGCCTCTGACCACCTATTCTATTATTTTGTCAAACTCTAAGGCCCCGTTTTGATAACCATTTGGTTTTTGAAAATTAGACTTGTTTTCTAACAGTTTTCCTACCATGGTTTTTATATTTGCCAATGACACATTTGAGTTCCTAGCCAAATTCTAAAATTAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTGCTTGGTTTTTAAAAACAAGGAAAGAAAAGTTATTAGCAAAACAAAGAAACTTGTAGGTGGAAGTAGGATTTATAAGCTTAATTTTCTCAAACCAAAAACCAAAAACCAAATGGTTATCAAACAGGGTCTAAATTATTTGCTCTTCATTATAAATCCCCCATACTAGTTCTCTGCACATATTGAAAGTTAGATACAATGACAATGCAAATAAGTTTAATCATGTATCTGGGTGGATAAAGTACAAAGTAGGCATTGCACATGAAATAGATCTAAAGAGAATACTTTAATTGGAAGAGGTTTTTAATGAACTGTCATTATTTGGTGTGTCATCACTTGGTGTGTGTTTTGATTTGTTTTGGGGGTTGTGGAAAAATGAAGGGGCTATGGTTAAGTATCTGTTTTTTCATTTGAGTACTTTAATATTTTGTTAGAATAGTAATCCAAAATAACTTGAAGCAATTAGTGGATTGGTCGGGGCTAGTTATGATTTTGAGATTATTGGTCTTTGCCTTCTAGTAACTTTGGATTTCTTGTTATTTTATGCCCCTATATTTTATTTGATTCTATATAACATTTTTTAGTTCAACAAGAGGTCGGGATTCAAACCTTTGACCGGTCGAGGATAAACCCCTAAGTCTTTGAACCAGCTTGTTTGCATTTCGCCTATTCTCCTAAGACAACTACTCGATCTTACTACATTTGATTGTCAAGGGTTAAATTTCTCTTTTTGGTTTAAGAATATGGTCTATCCTCTTTTTGTGGTAGTGTTTGGTTAAGCAACTTTTTCAATTTGGGACCCCTAAATTTTGTGGTGATGAGTCACAACCCGCACATGCTAAAGGACGGGCCTGGAGTGAAATTCAAGCCCAATTTCTTCTCTTCGCAAATTATGTATTTGATTAGTTTATGATTGGATAGTTACACAATATGAGACTGTAATTTTATGTTCGTGATGTAGTTGTTCACTGGTTAATTTGGACTTAGATGGCTGTGCTTTTGATGTGTTATTATGGCTTCCTTGTACTTGAATTTGTTCGGACGCAGATATCTTGGTTGCACATTAATAATGTTATCAGACTTCAACTAACTTGATTTATGTTGGTCCATTTTTTTCCTTTTCAAGGTGAATCTCTTAGTGGATTTTTTAGGGTAAATTCCGTTTTGGCTCTAGGCTATTGAAGATAAAACATGTTTTGCTTTTCCTAATGTTAATCTGCTTTAGACTCCAAGATCTTGAGTTGTTAGGCTAGAGATTCTCAAACACTCCCCTTTACGTTTGAATATTTGTTTGATTTACCAGGCCAAACTTGTAGGCTATTAGTATGATATAGAAGAAAGATAACGTTCTGGAAATTTTAAACATCAAACCCCCTATTCTACTACTTATTGATGCAGGGGTTTAAGAGTTGAATTCCCCTTTAATTTGTTAAACAATCCGTTGCTTCGTTGTTAGTACAAACTTCATTTGTAAACAAGCAAATTCTTAATAATGAAAGTTCTGTTTACTGTTTGTTAACATCACTTATGTTAAATCATTATTAGATCTTAGTTTAAGCTGTTAAAGTAGGAATTTCAGCTCCTAACACATTGTGTTACAAATTAGTTCATCGGAATCAATGAATTAATTGTTACAAGTTCATTTTGAATTAATGAATTAATAAATGTGTCTGTTTCATGATAATGGTATATGTGTTGCAGAAGACAAAAATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAATTCAACTGACATCTGTGCGAACATTTGCTGCTGGAGGCAAATCAAAGAAGGGCTCTAAAGGGGGTGCGGCTGCTGATGCTCCTAAAGCATCAATTCTGAGTAAAGAGGTCAAGTCTACCACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATCTGATCGATAAACATCCAGCTCTGAGTGAATTACGAAGGAGGAATGTCGATACCCTTCCCTACGAGGATCTCAAACGCTTCGTTAAATTGGATAACCGAGCAAGGATTAAGGAAAACAACTCCATTAAGGCCAAGAACTGATGTAAGAATCTAGCAGAGCCTTTGTTATTGTTCCTGCAGCTCTTTCTTCCTATAATCATATGATTAACTTAGGTCTATATTTTTTCGTTTACACCCCGTTCGACTTGGACTTAGTCTTTAAGCATTGGATAGTTATATGCATGTCATAGAAACATGATAAGAAGATAACCATCATGGATTGACCTAGTGGTAAAAAAGGACATACAAATAAAGGTTCTACAGGGAATATGTTCAAGCCATGATACTCACCCACCCAGGATTTAATATTCTACGAGTTACCTTGACAATCAAATGTAGTAGGGTCAAACGGTTGTCTTGACTCATGAATATTAAAAAAAAATATATTATGATGAGGAGATATGAACTATGGAATGATTATCAATATCAACTAGGAAGTCTCAAGTCTCATATGTGATGTGTCTTGCTATCACCTTTTCTCCTTTTTCGCCACTGTTGTCTTCAAAGTCTATTCTGATGTCTACTTTCTGTTAGTTTCTGCAAGCATATTCAAACCCGACCAGCACGGCGCTAGTAGATAGAATTGATAAGCACTGACCAATCTTGTTATAATCTTATATTTTGCAGAAAATAAGAGAGTTAGAGTCAAGTCAATCTCCTGCAAGCATGTGGAAGGAATAACAAGCAGAAGCTTACAACAGGAGCAATGCATTTTTAGATCTGTAAGCCATCATCTTATTGTCAAAAGTACACAACTTCTGGTTTACTACACATTCTTTAGTTGAATGAGAACAAGAAAAAGGATGATTCTTTCCGTAATCAAAACCTTTGAATTGTCAAAATTTTGAATGTGTACGGAACACTTTATGTCCCACTAGAGGATTTTATATTTCACATTTAAGAAAAAATGAACATTACATCCTTAACTTAGTTAGGTGTAGTTGATGCTTGAAGAGATTGCATTTGCTTCCAAATGGTTGATAATGACAAGTCAACTTTCTTGTCTCAAAATTAAT

mRNA sequence

CTGAAAACCCCTTTGGTCTCTCTCTCCCCCGATTTTCCCCTCTCTCAAATCCCTTTCCTCTCTCGATTACCCGTCGGCTTCCCTCCCCTCTGCGATCTCTCATTCTGACCATCGTCCGGCGAGCCCAGCAGCGCCAGACTTGTGATATTCTTCCCTTCCGGCGAGTCCTCAGCAGGTTCCGGCGTCGTTCTTCTTCCCTTCTCTTCCTAGTGATCTTCTCCTCTTTTAAGAAGACAAAAATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAATTCAACTGACATCTGTGCGAACATTTGCTGCTGGAGGCAAATCAAAGAAGGGCTCTAAAGGGGGTGCGGCTGCTGATGCTCCTAAAGCATCAATTCTGAGTAAAGAGGTCAAGTCTACCACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATCTGATCGATAAACATCCAGCTCTGAGTGAATTACGAAGGAGGAATGTCGATACCCTTCCCTACGAGGATCTCAAACGCTTCGTTAAATTGGATAACCGAGCAAGGATTAAGGAAAACAACTCCATTAAGGCCAAGAACTGATAAAATAAGAGAGTTAGAGTCAAGTCAATCTCCTGCAAGCATGTGGAAGGAATAACAAGCAGAAGCTTACAACAGGAGCAATGCATTTTTAGATCTGTAAGCCATCATCTTATTGTCAAAAGTACACAACTTCTGGTTTACTACACATTCTTTAGTTGAATGAGAACAAGAAAAAGGATGATTCTTTCCGTAATCAAAACCTTTGAATTGTCAAAATTTTGAATGTGTACGGAACACTTTATGTCCCACTAGAGGATTTTATATTTCACATTTAAGAAAAAATGAACATTACATCCTTAACTTAGTTAGGTGTAGTTGATGCTTGAAGAGATTGCATTTGCTTCCAAATGGTTGATAATGACAAGTCAACTTTCTTGTCTCAAAATTAAT

Coding sequence (CDS)

ATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAATTCAACTGACATCTGTGCGAACATTTGCTGCTGGAGGCAAATCAAAGAAGGGCTCTAAAGGGGGTGCGGCTGCTGATGCTCCTAAAGCATCAATTCTGAGTAAAGAGGTCAAGTCTACCACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATCTGATCGATAAACATCCAGCTCTGAGTGAATTACGAAGGAGGAATGTCGATACCCTTCCCTACGAGGATCTCAAACGCTTCGTTAAATTGGATAACCGAGCAAGGATTAAGGAAAACAACTCCATTAAGGCCAAGAACTGA

Protein sequence

MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
Homology
[Close]
BLAST of Lcy09g020490 vs. ExPASy Swiss-Prot
Match: Q9CPW3 (39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0 

Query: 36 KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPDWLWHL 89
          KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+ +
Sbjct: 42 KGGKGGVAAEALKDPEVCTDPTQLTTHAMGVNIYKEGQDVALKADSEYPTWLFQV 96

[Close]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match: A0A6J1JQ61 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486735 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.6e-56
Identity = 119/133 (89.47%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTT 60
           MAMSQIRLFRRSL+NTKDLI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTT
Sbjct: 1   MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTT 60

Query: 61  VVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNR 120
           VVGANILKEGADPK+MADSEYPDWLW LIDK PALSELRR++  TLPYEDLKRFVKLD R
Sbjct: 61  VVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDTR 120

Query: 121 ARIKENNSIKAKN 134
           ARIKENNS KAKN
Sbjct: 121 ARIKENNSSKAKN 132

[Close]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match: A0A5D3CXE8 (39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00130 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDN 120
           TVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+N ++LPY DL+RFVKLD 
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 133
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match: A0A1S3B544 (54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDN 120
           TVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+N ++LPY DL+RFVKLD 
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 121 RARIKENNSIKAK 133
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match: A0A1S4DUD4 (39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDN 120
           TVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+N ++LPY DL+RFVKLD 
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 133
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match: A0A6J1DJG1 (54S ribosomal protein L37, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021461 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.8e-54
Identity = 116/133 (87.22%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTT 60
           MAMSQ RLF RS++N KD I++TSVRTFAAGGK KKGSKGGAAAD PKASILSKEVKS+T
Sbjct: 1   MAMSQSRLF-RSIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSST 60

Query: 61  VVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNR 120
           VVGANILKEGADPK+MADSEYPDWLW LIDKHPALSELRR+NV+ LPYEDLKRFVKLDNR
Sbjct: 61  VVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKRFVKLDNR 120

Query: 121 ARIKENNSIKAKN 134
           A IKENNSIKAKN
Sbjct: 121 ASIKENNSIKAKN 131

[Close]
BLAST of Lcy09g020490 vs. NCBI nr
Match: XP_038883607.1 (54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_038883608.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTT 60
           M MSQIRLFRRS+VN+KDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTT
Sbjct: 1   MVMSQIRLFRRSIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVKSTT 60

Query: 61  VVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNR 120
           VVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+NV+TLPY DLKRFVKLD R
Sbjct: 61  VVGANILKEGADPKIMADSEYPVWLWHLLDKHPPLSELRRKNVETLPYVDLKRFVKLDTR 120

Query: 121 ARIKENNSIKAKN 134
           A+IKENNS KAKN
Sbjct: 121 AKIKENNSTKAKN 133

[Close]
BLAST of Lcy09g020490 vs. NCBI nr
Match: XP_038883606.1 (39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTT 60
           M MSQIRLFRRS+VN+KDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTT
Sbjct: 9   MVMSQIRLFRRSIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVKSTT 68

Query: 61  VVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNR 120
           VVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+NV+TLPY DLKRFVKLD R
Sbjct: 69  VVGANILKEGADPKIMADSEYPVWLWHLLDKHPPLSELRRKNVETLPYVDLKRFVKLDTR 128

Query: 121 ARIKENNSIKAKN 134
           A+IKENNS KAKN
Sbjct: 129 AKIKENNSTKAKN 141

[Close]
BLAST of Lcy09g020490 vs. NCBI nr
Match: XP_022989738.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 119/133 (89.47%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTT 60
           MAMSQIRLFRRSL+NTKDLI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTT
Sbjct: 1   MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTT 60

Query: 61  VVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNR 120
           VVGANILKEGADPK+MADSEYPDWLW LIDK PALSELRR++  TLPYEDLKRFVKLD R
Sbjct: 61  VVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDTR 120

Query: 121 ARIKENNSIKAKN 134
           ARIKENNS KAKN
Sbjct: 121 ARIKENNSSKAKN 132

[Close]
BLAST of Lcy09g020490 vs. NCBI nr
Match: XP_008442187.1 (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDN 120
           TVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+N ++LPY DL+RFVKLD 
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 121 RARIKENNSIKAK 133
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]
BLAST of Lcy09g020490 vs. NCBI nr
Match: XP_016899597.1 (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >KAA0041217.1 39S ribosomal protein L54 [Cucumis melo var. makuwa] >TYK16020.1 39S ribosomal protein L54 [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDN 120
           TVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR+N ++LPY DL+RFVKLD 
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 133
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]
BLAST of Lcy09g020490 vs. TAIR 10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 174.5 bits (441), Expect = 5.8e-44
Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 0 

Query: 3   MSQIRLFRRSLVNTKDLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 62
           M++I L R S  ++KD+++    RTF AA  K+KKG KGG A+DAPK S L+KE+KSTTV
Sbjct: 1   MNRIGLIRGS--SSKDVVR----RTFAAAASKAKKGGKGGGASDAPKGSSLTKEIKSTTV 60

Query: 63  VGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNRA 122
           VGAN LK+G+DPKI+ DS+YPDWLWHL+DK PALSELRR+NV+TLPY+DLKRFVKLD R 
Sbjct: 61  VGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRG 120

Query: 123 RIKENNSIKAKN 134
           +IKENNSIKAKN
Sbjct: 121 KIKENNSIKAKN 126

[Close]
BLAST of Lcy09g020490 vs. TAIR 10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-39
Identity = 83/132 (62.88%), Postives = 106/132 (80.30%), Query Frame = 0 

Query: 3   MSQIRLFRRSLVNTKDLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTV 62
           M+ IR+F  S+  +KD+++    RTFA A GK+KK  +G    DAPKAS LSKE+KS+ V
Sbjct: 1   MNLIRMFGDSISRSKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSMV 60

Query: 63  VGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYEDLKRFVKLDNRA 122
           V AN LK+G DPKI+ +S++PD+LWHL+DK PALSELRR+NV+TL ++DLKRFVKLD RA
Sbjct: 61  VSANTLKDGLDPKILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTRA 120

Query: 123 RIKENNSIKAKN 134
           RIKEN+SIKAKN
Sbjct: 121 RIKENHSIKAKN 132

The following BLAST results are available for this feature:
BLAST of Lcy09g020490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CPW34.4e-0447.2739S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1... [more]
BLAST of Lcy09g020490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JQ616.6e-5689.4754S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A5D3CXE82.8e-5485.7139S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3B5442.8e-5485.7154S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
A0A1S4DUD42.8e-5485.7139S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L... [more]
A0A6J1DJG14.8e-5487.2254S ribosomal protein L37, mitochondrial-like OS=Momordica charantia OX=3673 GN=... [more]
BLAST of Lcy09g020490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883607.11.1e-5790.2354S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_0388... [more]
XP_038883606.11.1e-5790.2339S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida][more]
XP_022989738.11.4e-5589.4754S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1... [more]
XP_008442187.15.8e-5485.71PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo][more]
XP_016899597.15.8e-5485.71PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >K... [more]
BLAST of Lcy09g020490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01740.15.8e-4468.94Mitochondrial ribosomal protein L37 [more]
AT5G14290.11.5e-3962.88Mitochondrial ribosomal protein L37 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 52..92
e-value: 3.8E-13
score: 50.0
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR2859539S RIBOSOMAL PROTEIN L54, MITOCHONDRIALcoord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g020490.1Lcy09g020490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome