Lcy09g018830 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAGATCTCCACTTCAATATTTGCAATATCAAGCTTCATGAGGAAGGAGAACAACTCAAGAAACATGAAGACACCAAACACGAGATCTCCAATTCTGGTGTTATATAGGGCTTGAGCCTTAAAGTAGTGTTTTAATGTAAATTCTTCTTGTAACCTTCTTTTGGACATCATGTATAATTTATTTAATAGGTATTAGGCCCAAGAATTGGGTTATCTACATTTTAGAGACTCATATAGAGAAACCCTAAATTTGTGTAACTTAGAACACTATTTACTTTAGGTTTTAATTAGTTTAAGTTTATTTTAGGGGTTAGTTAGGGTTTTCTTATTTAAGGATATTTAAAGTCAAAACCTGTACATTTGAGGGGGTTTTAGATTTTTCATGGATGAATGAAAGAGCCCTTTAAGCATTTTCTTTGCTCCAAATTGCGAGCATATCTTGTGTATTTTCTTGCTTTATAACTTGTATGCCCTAGAAACCCTCCACAAGTTTGGTCATCAAACTTGTGAAGGGTTTTGACTTTGAATTGGAAACGAGTCTCTCTATTGGAAGTTTTGACCCTCAAGGTTAGTCTTTTCTTCTTTCTCTTGAGTAAACACCTTGGGATTGCTTCCTTCAGCTCCTTATAGAAAATCTCCTTCCAAAAGCCTCCCCTTTTGTCTAAAAGCGACGACAAGAATAAATACCCTCATTAGACTTGAGATGCTACTTTGGCAACTTTTCCTTGGAAAATATGAGTTGAATCAACTGAAAAGAAGCCAACTCCATTAAAGAGTCGTCTTCTCACATGTTGTATCAAGTTAATCGTTACTCCTTCAAGTGCTTCAGCAAGCTTTAGAGACTCAGCAATATGGTGTTCTACATTTTCTCAAACTGCTGAAATTTTGCTCGTGTAATTTTTTTGTAAAATAATGCTCCCTAAAAACCTTTGCTAAAATACCCTTATGTATATTGAAATTGAATGCAGATAATCTAACGTTGGCTGGAAGTTCAGTTACGCTACGCTCGAGAATTTCTCAAGTGCTACTTGGACTTGACGAAGAGTACAATCCTGTCATTGCGGTAATTCAAGGAAGATCCTCAATCAATTGGGCTAAGCTACAAGCTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGCACCAATTATCTCAACTTCGACAGTCAATATGGCTAATACTCAAAATTTAGCTACTGGAAATCAGAAGAACAACATGGGCAATCAAGGGAATCAACATCATTTTAGCAATTTCAATTCGAGAGGTGGACGAAGCCGTGGCAGGGGGCGATGGAATGGAAATAATGGAAATAGTCGGCCCGTCTATCAGGTATGCAACAAAGTGGGTCATCTCGCCTCTGTATGTTATTTTCGCTTTGAGAAATAA ATGAAGGAGATCTCCACTTCAATATTTGCAATATCAAGCTTCATGAGGAAGGAGAACAACTCAAGAAACATGAAGACACCAAACACGAGATCTCCAATTCTGAAACCCTCCACAAGTTTGGTCATCAAACTTGTGAAGGGTTTTGACTTTGAATTGGAAACGAGTCTCTCTATTGGAAGTTTTGACCCTCAAGATAATCTAACGTTGGCTGGAAGTTCAGTTACGCTACGCTCGAGAATTTCTCAAGTGCTACTTGGACTTGACGAAGAGTACAATCCTGTCATTGCGGTAATTCAAGGAAGATCCTCAATCAATTGGGCTAAGCTACAAGCTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGCACCAATTATCTCAACTTCGACAGTCAATATGGCTAATACTCAAAATTTAGCTACTGGAAATCAGAAGAACAACATGGGCAATCAAGGGAATCAACATCATTTTAGCAATTTCAATTCGAGAGGTGGACGAAGCCGTGGCAGGGGGCGATGGAATGGAAATAATGGAAATAGTCGGCCCGTCTATCAGGTATGCAACAAAGTGGGTCATCTCGCCTCTGTATGTTATTTTCGCTTTGAGAAATAA ATGAAGGAGATCTCCACTTCAATATTTGCAATATCAAGCTTCATGAGGAAGGAGAACAACTCAAGAAACATGAAGACACCAAACACGAGATCTCCAATTCTGAAACCCTCCACAAGTTTGGTCATCAAACTTGTGAAGGGTTTTGACTTTGAATTGGAAACGAGTCTCTCTATTGGAAGTTTTGACCCTCAAGATAATCTAACGTTGGCTGGAAGTTCAGTTACGCTACGCTCGAGAATTTCTCAAGTGCTACTTGGACTTGACGAAGAGTACAATCCTGTCATTGCGGTAATTCAAGGAAGATCCTCAATCAATTGGGCTAAGCTACAAGCTGAACTATTATCTTTTGAGAGGCATTTAGAGTTTCAGAATTCACAGAAAAGTGGAGCACCAATTATCTCAACTTCGACAGTCAATATGGCTAATACTCAAAATTTAGCTACTGGAAATCAGAAGAACAACATGGGCAATCAAGGGAATCAACATCATTTTAGCAATTTCAATTCGAGAGGTGGACGAAGCCGTGGCAGGGGGCGATGGAATGGAAATAATGGAAATAGTCGGCCCGTCTATCAGGTATGCAACAAAGTGGGTCATCTCGCCTCTGTATGTTATTTTCGCTTTGAGAAATAA MKEISTSIFAISSFMRKENNSRNMKTPNTRSPILKPSTSLVIKLVKGFDFELETSLSIGSFDPQDNLTLAGSSVTLRSRISQVLLGLDEEYNPVIAVIQGRSSINWAKLQAELLSFERHLEFQNSQKSGAPIISTSTVNMANTQNLATGNQKNNMGNQGNQHHFSNFNSRGGRSRGRGRWNGNNGNSRPVYQVCNKVGHLASVCYFRFEK Homology
BLAST of Lcy09g018830 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20 Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 0
BLAST of Lcy09g018830 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 0
BLAST of Lcy09g018830 vs. ExPASy TrEMBL
Match: A0A6J1DZR1 (uncharacterized protein LOC111025011 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025011 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.6e-17 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Lcy09g018830 vs. ExPASy TrEMBL
Match: A0A6J1DW60 (uncharacterized protein LOC111025011 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025011 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.6e-17 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Lcy09g018830 vs. ExPASy TrEMBL
Match: A0A5D3BWB6 (Putative Ty1-copia-like retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00030 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.6e-17 Identity = 69/193 (35.75%), Postives = 107/193 (55.44%), Query Frame = 0
BLAST of Lcy09g018830 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-22 Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Lcy09g018830 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-22 Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Lcy09g018830 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 109.4 bits (272), Expect = 3.9e-20 Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 0
BLAST of Lcy09g018830 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 3.1e-17 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 0
BLAST of Lcy09g018830 vs. NCBI nr
Match: XP_022158550.1 (uncharacterized protein LOC111025011 isoform X2 [Momordica charantia]) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-16 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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