Lcy09g017900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g017900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AT-hook motif nuclear-localized protein
Location	Chr09: 37938636 .. 37951820 (-)
RNA-Seq Expression	Lcy09g017900
Synteny	Lcy09g017900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTACAGCAACGGCCGGATCAGATCCTCCGGTGGCTGTCCGGTGGGTTCTGGGGCGGCGGCCTCAAGGAAGAAGAAGAGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGTGGCACTGTCGTCGAAGCCGATATCGACGTCGGCCCCGACGGCGGTGATCGATTTCTCGGCGGAGAAACGTGGGAAAGTCCGGCCGGCGAGCTCCTTAAGTAAATCTAAATATGAAGTGGAGAATTTAGGTAATGAAATTTGACTTAAACTTTGTTTAGTTTTTTGGATTTGGGCTAATTTTGAGAATTTGAATATCTAACCTTTTGATCGAGGGTATATATCAATTACTGTTGAGCTATATTTATCTTAATAATGAGATATTGAAGTTTAGGAACATGCCAAAGTTTTTTATTATTTTTATTTTATTTGAAGTTTGATGGTATATTTTGATTAAAATTTATGAGATTTCTTGATGTTAAAAGGGAAATTAAATCTAAATATCTTTGACATTAATAAGAGGTAATAGAAATCTAAATATGATAAAACTATTTGTGGATATGAGAGTCCTATAATGTCAAATTTTAATTTGTTTCAATATCATTGGGTATGATTAAGTATAAGTTAATTAAAAAATATGAATTCAGGCTTAGTTTAAAGTTAATATTTCCATTGATAAGTAGAAAAAAAATATGTCATAGCCTTAACCTTTTACAATAATGAATAATATTCTACTTTAAGGTTCATCTATGAAAAACTTGTTATTTTGAATTTAGAATTCTTATTTGATAATAAAAAATTTCAAAATATAGGGTCATATTGAAACTAATTTAGAAACTAAAAATGTGGTTTGATGTTATTTTTCAATTATTGACTTTGATTATTTTTTCTTTTTTTGTAGGTGAATGGATACCTTGTTCTGTTGGTGCTAATTTCACACTCCATATCATCACTGTCAACACTGGTGAGGTAATAATGGACTCTCTAATACAAAATTATTGTATCAATTTACTTGTACTCAATTATGCTACTTTTTTTTAAAGCTAAATATTAATTAGATTAGTCGATATTTCTATATTTCGACGCAACAACGAGATGTTTGTTGTATTGTAATTTTCAGGACATTACAATGAAGGTTCTCTCATTTTCCCAACAAGGGCCTTGAGCCATCTGCATTCTCTCCGCAAACGGCGTGATTTCAAGCGTCACGCTACGTCAACCCGATTCCTCTGGAGGAACATTAACATATGAGGTTGTATCTTTATGTTCCATTGATGCAGAACTCTCTTTATCAAACAAATGTTTGTTCAATGGCATTAGAGTTTGCAGTTGGTTTTAGGAAGTGCAAATGTTGTGGTGTTTGTTGTTGTTGATCATAAGGCCAAACTCCCTCTCTTTCCCTTGTAGGGTCGTTTCGAGATATTGTCGTTGTCGGGATCATTCATGCCGAGCGAGAGTGCAGGAACAAGGAGTAGAACCGGTGGAATGAGCGTCTCCTTAGCAAGTCCAGACGGACGCGTCGTTGGTGGCGGAGTTGCTGGTTTGTTAGTAGCTTCTAGTCCTGTTCAGGTAATTGCCTCTTTGTCTTCTTATTATATACCTAGTATTTGGTTCAATTATAACTTTGGTTCTTAAACTTCCAAAAGTTAGATTTTATTCGATCTTTAAAAAGTTTTTAATATGTTCCTAAACTTGCTGAAATTCAAAACGAAATTAACAACAGTGGTTTATTGGACTAATAAAATTACAAGTTTAATGACCCGTTATAAACGTTTTTGAAGTAGACTAGAAAAAAAAATTATAAGATAGACACAACCTCTAACATTTATTAAGGAACTTATAATTTGAGTTCATATTTCTTCTGCTTAACAACTTTGGCAAATGCAGGTGGTAGTAGGAAGCTTTATATCTGGGAACCAGCATGAGCAAAAGCCGAAGAAGCCGAAACAGGACTTCGTATTACCGGTTTCTCTGCTCTTCCAATCTCCAGCACTGAACCGAAGTCATACACGACGACAACGACGACGACATCTTTTCGTGCTGAAACTTGGTCACCATTGGTTCCAGATTTGAGAAGTCAGCCAACTGATATTAATGTATCTTTAACTAGTGGTTAACGAATACGGGTGTCATATCGTTCGACTGTCACCGACCACGCATCGTCGTCGAGCTTCGACTTGGGTAGGCGTCGATGTTTTTTTTACGTCGATTGGCAGCTGACTATTTTTTAGTACCAACATATGTTGTTCTTGTTCATTTTGTTTTGATATTTTCCTTAAGTTTCAGATAGTACTTGACAGATTGTTTAGGGTGCAGCTCTGTCATGTAATGTAGAAAATAGTTTGATTTGCAACCAGAGTTCTAAATCCAGTATTCTTTGCATTGATGGATTCTGTTTTCAGTTTCTATTTTCCTTGGATATTTCAAGCTTCTATAGGTCTTAAATTCATTTGTTTCTACGTTAAAAAAAACACTTTTGGTCCATGTACTTTCATAAAAGTAATAATTTAGTTCCTGAATTTTTGTTTGCAACGATTTAGTCTTTGAACTCTCAATTTTGTAACAATTTAGGTTTCGTTTGATAATCATTTAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTATGCTTGTTTTCTCCTAAATTCCTTACCATGGCTTTCATCCTACTTAAGGTTGCATTTGAATTCCTAGCCAAATTTTAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTTGTTTCCAAAATTGGACTTGGTTTTTGAAAACAAGGTAAATGATTGATACTAAAACCAATAAACTTATAGGTGGAAGTACGTGTGTATAAGCATAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAATGGGGCCTTAGTTTTTTAAAATTATGATTGTTTTCTCTCAAATTCCTTAACATGGTTTTCATTCTTGTTAACTACTTCACTTGAATTTCTAACCAAATTTTAAATACAAAAACAAGTCTTTGAAAACTACTTTTTTTAGTTTTAAAAAATTGGCTTCGTTTTTTAAAATATAGGAAGAAGGTAGATAAAAATAAATAAATAAAAAAAACTTAGAGGTGGAAGTACTATTTATAAGCTTAAAAACCAAAAATCAAAAACTAAAAACCAAATGATTATCAAATGGCACAGTCTCTGAGTTTTAATAGGTAACAATTTAGTCTTTACACTTTAAAATTTGTAACGATTTAGTCTTTATAGTGAAAATTTTCATCGAAATTAAGTGTAAATTTTTATTATCTAATTACTTAATCTTTGTAGATTACAAATACACACATGATCCTAATCAAGTTATCGATCACTATATATGTGAGAAATTTCATGAAATTTTAATGATAACTTTTATGACAAGAACTAAATCATTACAAATTTTAAAGTTCAATGACTTAAATTGTAACATAGGGACTAAATCGTTATCAAATTAAAAGTACAAGGACTAAATTGTTATAAATTAAAGTTCAGAGACTAAATTGTTTTTTTTTTTTTTTTTTTTGAAATATTAGAGACTAAATTGTTGTTTTTATGAAAGTTCAGGGATCAAATGTGTTTTTTAACCTGGTTTTTATTATACTTGGTTCACATTTTCGTAACTTTAGACCGGTTTGGGTGTTCGATTGAACTTGTTGGCTCTACATCCATCAAAAGTAGGTTGCTCCCTCTATTGATAGCATTTAATACTCTCTCTAGGTAGCTTCAATAATTCATTTAAAGTCTTTGAAAGAAAAGGGTGGATACTCCTTCCATTTATTAACTTGCCACCTTATCATCCTTTGAAAAATGATATAGAATCTACCAGCATTAAAGTTATATTTATAAAGGCAAATTTACAGTGGGAAGAAAGGAAATATGGTATATAGTAGTACTAGAAATTTTCCGACGTCAAGGGTGACAAAGATAATAAGTTGACGCGATTGATCGCGGAGTTGTTTTGATTGGTTTAGTTTGATTTCAGTAGGTTTTGTTAGTTTTGATTCGTTAAGGAAAAAACTTGTCTGCATACCAGTATGTAGGGATCTCCCTACATACTACCATTAAAACGTTGACAACTAAGAGAGATAACAAAAAATTCTCATTTTCTCCCTTCCTCTTTCTTACTTGACAAGATTTTAATGCGGAATGTAGGGAGACCCCTACATACCAGTATGCAGGCAAGTTTTGTTCATTGGTTAATTCGTACGGTTTTGTCAAGTCATGAGTTTGATTTGGCTCAATTTTCAAATTTTAGTTTCATTGGCAATTTTTAACATTTTCATAAACTAGAGTATGCTGGTTTGATGTCGAGTTTGATCAAAAATAGATCCACTTACAGTAATAGTCCTTAAAAGGACTCCAAACCAAAAGTTTGAGTCTCGTTTGATAATCATTTGGATTTTTGTTTTTGGTGTTTGAAAAGTATGCTTATTTTCTCCTAATTTCCTTACCATGTGCTTTTCATCTTTGACAAGGTCTCATTTAAATTTTTAGCCAAATTCCAAAAACCAAAACAAGCTTTTTTGAAAACTAATTTTTTAGTTTTCAAAACTTGACATGGCTTTTGAAAACACGACTAGGAAGTAGATAACAAAACAAAGAAATCAATTAGTGAAAGTAGTATTTATAAGCTTAATTTTCAAAAATAAAAAACTAAGACCCCGTTTGATAACTATTTGGTGTTTTGTTTTTGGTTTTTGGTTTTTAAGCTTATAAACACCACTTCCAACTCTAAGTTTCTTTGGCTTTTCACTCTACCTTCTTCCCATGTTTTCAAAAACCAAGCTAATTTTTGAAAACTAAAAATAAGTAGTTTTCAAAAATTTGTTTTTGTTTTTAGAGTTTGGTTAGGAATTCAAATGTGTCTTTAACAAAAATGAAAACCATGGTGAGGAAATTTAAAGAAAACAAACCTAATTTTCAAAAACCAAATGGTTATTAAATGGACTTAAAAACCAAATGGTTATCAAACGTAGCCTTCACTATTCAAAAGTTAAGTTGAAACACCCAATAAACATACATATCAAATGCAAATTTAATGGAGAGAACATACACGGGAGATCAATTCAGAAATATTTTAATACTTTTAACTTTCTTCAAATGTTAGAACAAAATGCAAACTTTTTCATACCTCCACAATAGTAATAAGTTCATCTATACCTTGAGACTAAAAATCACATGTTTTTTACTTTTAAATTTTAATAATAAAGATCTTATATCAATAGGGATGTTGTATTTACCAATGACTATATACCTAAGACCTTCCTCGTTTTCAATCGGACACAAAACTATGGTCGGATTCCAAAACCAAATGGGATAATGATGTTTAACTCACACAAAACAACAAGGTTTTAAGAAGGGTTTCTTATAATCCAAGCCACATGATTTTAAAGAAATGCATTCCCCTATTTGGGTAAGTTTTGTTTCTTTAGGAAAAGTCTTAAGGCCAAGATTATAAAAATTTGCTAGCTTGGAAACCCTCCTCAAAATAGGAGCAATAAATTGAATTGGGTATAGTTTTGCCCTGATGTTAATGCAAGAACAATGGATTTTTGCTTTTGTTTCTATTTTACTTAAATAACAAACAATCCCAATATTCCCTTCCCCATATTATGCTTGCAAGCTTTCATTACTTCACAAAAATATGTAGCCAAATTAACATTCTATATCCTCACTCTCTGATCTCCTAATTATTTATTCACAAAATAGACTCTATTTTAAGCAATCGAATATGTAATTTAACAAATCTGGCTCGGTGAATAAAGCACCTATATTACTTTTTTTGGGATTGATCGAAAGTTACATTTTTCATGCTCACATTTGTTGAATTGAAAAAAAATTATGTAATTTAGTCTCCGATGTTATATCATTTTCTTCGACTTTGTTCCTGATCTTTTAAAAGTTTCAATTTTATGTTTTGCCTACTGATTTTCTTAAACAAATTCTTACTGTTATCACTAAATATTTAAATTTTGTAATTAATTTTATGGAGTTGTTAGAGCATTGTTTAATGATCAAATTTCTATAACAAGCTATATTAAGTGATAAGTTATTATTGACTAAAGTTATATAAGATCGGAAAGTTTGATATTTGTAAGTATCTAAGTTGGTTGACACAAACTTCGACTAATCTCATGAGACAAATTGTTGAATCCCACAACATCGTTTTTTATTGCAAAGAAATTCATAAAATTTTATGCTATGTAGATAGTCATTCGAGGGTTTGAAACTCATTCCCCAAAGTTTGTTTCTGTTCCTTTCACATGTCCCAATGCTGCTCAGTTCCCTTAAAAGGTGTACTTTGACGTTGGGCCATCATTTTATAAACGAATCTTAAAGTCGGGGTGAGTCAATAAGAAGAAAAATCAATACACATAAAAAAATGAAATTAAAACGCTTCAAAGATTATGAAACAATTAAATTATATATTTAGGCAAGTATAAATAGCAATTGAAGGAAGAGTTAGGGAAGAGAGAGTGAATGGAAAAATGGGGATGAGAATTATGATGGGATTAGTACCTATTTTGGTGGTTGTGGTTTTGTGGGTAACTTCAAAATCATCTCAATTTTTTCTAAGTAGTCAGCTCCTTGGCAGTCCTCATTTCATTTTCTCAATCTTCAACTCCATAATTCTTCTCATAACTGTGAGACACCATGAGCCACCACCTCACCAACAACACTACAAAAAAGTTGGCCTATTTCGACCATGTTTTATCGAAGGTTATAAAAAACCTTTGAAAAAGATATGCATTTATCAAAGGTATTTAAATAACCTTTGAAAAATATCAACTTTTATCGAAGGTTCTTACAAACTTTTGAAGAAGATATAATGTCTATCAAAGGACATTAAAAACCTTTGAAAATTATATTATCTTTATCGAAGGTATTTAAAAAACCTTTGATAAATATCTACCCTTTATTAGAGGTTATTAAAAACCTTTGAAAATTATATTATCCTTTATCGAAGGTATTTAAAAAACCTTTGATAAATATCTACCTTTTATCAAAGGTTCTTAAAAATCTTTGAAAAAGATATAATATTTATCAAGGAACATTAAAAACCTTTGAAACTTATATTATCCTTTACCGAAGATATTTAAAAAAACCTTTGATAAATATCTACCTTTTATCGAAGGTTCTTAAAAACTTTTGAAAAATATATGATATTTATCAAAGGACATTAAAAGCCTTTAAAAATTGTACTATCATTTATCGAAGGTATTTAAAAAACCTTTGATACTATCTACCTTTTACGAAGGTTCTTAAAAACCTTTGAAAAATATATAATATTTATCAAAGGACATTAAAAACCTTTAAAAATTATACTATTCTTTATCGAAGGTATTTCAAAAACCTTTGACAAATATCTACCATTTATCGAAGGTTATTAAAAACTTTTGAAAATTATATTTCCTTTTATCAAATGTTTTGAAAAGAAAAAAAAAACCTTTACACAAATATATACTTTTTATTGAAGGGTATTAAAAATCTTTGAAAAAATTTTTCAAAAAAAAAAAATCTTTGAAAAATTAATTGTCCTTTATCAAAAAGCCTTTAAAAATACTAGATTTTTAACACGTGTGTTTCATGTGGTTTTTCTCTTTTAAAAATTAATCTTATAATATAAAATTTAAAACTATGCATAAATGGTTTAACTTAACAAAATAATTATGAATTATAATTTTTTTCTTTTGTTTTAAAAAATTACAGTTTGTCATTAAATACTTTTTTTAAAAAAAAAATAGACTAAGTACTCTAGTTATGTTCAAATGGTTGAAAATAGTTATTAATTAATAGTTAGAATAATTAATGGTTATTTGTAAAACTAAATTCAATGAGAAAAAAGAGAGAGGTGAGTAGAGAGAAGGTAGGCATAATCCATAAATGGTTGAGCACTATATTTATATTGTTGTTGTTATTATTATTATTATTTCAATAATATTGGAAGAGATCATAAAGTGAATAAAAAAAACCATGTTTACATTTGTTTTGCTTTTACCATATGTTTAAATATAGAAAATCTATTTTATTAGATAGACTGTGGATATGAAAAAAAATATCAATGTTATATATTTGTATATATTTTCTCATTGATAGTTAACTTTAAATATATAGGTATATGTATATGTTAACCTTATTTCTTTCAATGAATTTAATTTTATTCATAAAGTACTTGAAAATATATTAAATAACAAAGACATAGTAAATGTTTTAAAATTGTTTAATATGTTATTTAAATTCTCTTTTCCTTTTTAAACAAAATTTTATTTAATTAATTAGAAAGAAAGATATATATTTCTAAGGGGGAAAAACATCTACTAAATCTCTCAGTTTTCAAATTTTGATTTTTTTTTAATATCAAATGTGCCTTGTTATAATTTTGTAATAATATTACTTGAATTAAATTTTTTATAAACATAAAAAGAGTAAATATCATATTAATGCATTTTTAATAGAGTATGAAAATTTTTAATGGTATTAATATGATTTGTGCTAATTTAACATTAGTATGGATGTGCAATTTTTATTTTTATTTTTATTTTTATTTAAAGTAGGGATAAACAGCACAAAACAAAATATAAAAACATGGGTAGGTCTCTAGAGTCAGGAGACAACTACATTCACTCAAGGTGGGTGTTCTTCAATCCAAATTTGTGACACTTTGGATCGTCTGAGATGTGCAACTATATCATAATAAAAAATAGACATGGCTATAATAAAGATGAAAATGAAGCTAAAAAAGAGTATGGAAGACACACATACAAGAAAGATATGGGAAGAAGCAAAATTCACCAATAAAAGCAATTACATTATTCCCAGCATTTCCTGTCAACAAATTATCTAATTGATTATGGGTTTGTGGCTTCTAAATCTAACTTTGCCGCAACAGTCAATGAAGTAGATGATGTTTCTAAATGGACGTGAATGTTGCTTGCAGTATCTCATAGGGAGCTTTTGAGTAACAAAGGGCATAGATGAAATTGAGAGGGATTGTTCTCATTCTTTCTTGAAATAAGGAGAGGCAGAAGAAGTTGCCAAAGAAGAACCACAAACCATAAGAGAGAGGAAGAGAAAGGGTAGGTAATAAATAGCAGAGGCTTTAATCCGTAACTGACAAGTGAGAGTTGAAGTTTAAACAAGAAAGGAAGGTGGAGAGATTATAGGGAATATAATGAATAGTTGGGAGAAATGAATTTGAATCAATTTTTTTTATAAGGTTATGTGGATCCATGAACCCATTTTTTAGTTTTTATCCTAGGTTAAAACTAGGGGTACAACTTGGTTCGGTTTTCTCGGTTTTGGGCCCAACCGAGAACCGAACCGATGTATTCGGTTTTGTAAAATAGGGAACCGAACCAATGTCCAGTAAGGGACAAAACCGTCGGTTCGGTTCATCCATTGGTTCGGTTTTCGGTTTTGGGATTTCACCTCTCACAGTTACGTTAAAGAAAGATTTGAGATTTTTTTTTAAAAAAAAAAAATGAAGAAGAAGAGAAGGATTTGAGATTTCACAGTTCAACATTGAAGAGAATACAAAATTGATAAAGCTTAGACAAATTCACAATCAAAAGATGACTTCAGACACAAAGCATGCAGAAATTAAGTGTCAGCAAAAAAACACAAACCAACAGATTGCTATGTGACGAAGGCTGCTACTTCTTGCTACAAAGGAGTTCGACTGCAGCAAGGGCCCAAGGCTGCTATGCCATGCGACGGACTGCCAAACGAACAACAAATTGCAGCACCTTCAACGGAACAACGAGGCTGACGGAAAGAACTGTAGCAACGCGTCAAACGGTGATGTGATGGATGGCGACGATGAGGTGATGACGATCTTGTGCTCGGTGACCGGTGAGAATAGAGAGACAGAGAGAGCCAGAGAGGAGGAGACAGCGATGTTGGAGGTGGGCTACTGTGAGGAGAGGATTGTGGCTAAATGAATTGAGGAGGATTGCGATCACTTAAAGATTAGGGTTTCTAAGAGAGTATTTATATATCGGTTCGGTTCGGTTTTTTAACTGAATTTTCAATTCAAAACCGAACCGAACCGAAAAAAAGCGGTTTTCCCTATAAACAAACCGACATGTCCAATGTTTTTCTAAAAAATCGAACCAAACCAATGGATCGATTTGGATCGGTTCGGTTCATCGGTTTTTCGGTTTTTAGTTGCACTCCTAGTTAAAACCTTCGATAAAGATGTTTATGAAAAGAATATTATTCTTTATCAAGGCATTTAAAAAACCCACCGCTCTAAGAAGTATGTTTTTCTTTTCTTTTGGGTTAAAAATAAAAGTTAGGTTTATTTCTATTCTTTTCCTTGGTGAAAGCACGCTAGGTCTAAACACTCTCCCTTTTTGTTTGTCATCGGTTCGTTCGTCGATCGTGATCAATAGTTCGCAGGCTGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCGGTTTCAATTGTTGCACGGTAATCTTTATTCTTCTTCCATCTCTCCCTCCAATTTCCCCCAATTTGAACTTCTAGTGACCTAAATTAGTTGAACGAACAAAGCTAGTTTTGCCAGCAATTTGATCTAAAGCGGCATCAGATTTAGGTTTTGGTTTCCGTTTTGTTCTAATTTTTGTGTGGAATTGGTGTAATTGTAGGTGGAATTTTGTCTGTGTTTGATTTTGACTCCACTCGATTACGTTCCAGGGATCATCTACACTCTCCATGCCATCGTCTTCGTTGAGTTCATGCCCGCAGTGATCTTGCTGAGGTGAGTGGAACTGAGAAGAGCTTTGACATGTGATTAATTGAACTAAAGCTTATAATTGAACTAGAGCTTTGCTAAGGTGAGTGGAACTGAGAAGGTTATTATTAATAACCTTTGATAAGTATCTACCCTCCATCTTCGTCTTCGACTTCGACACAAGGTAATAACATTAGATCTGTCACACACTGTTTCCATGCTCATCATATTTGATATGTTATGTTCAATGTTCTTTGTTTTCATTTTTTTTTCTTATTTCTTTTTGTTCTTCTTCCTTAATCTACAGTTAACCAAACCATCATTGATCTTGGATTGATTACACATATAACCTCAAATTAGCATAATTATTTTGTCTCTTTCTTTTGTAGGAAATCATGGCAATAGTACTAGAACTGTTGTATTTGTTGTGGTGTCTATCATTTCAGCCATCATTCTCATGGTTGACATTTGCATCATTTTGAGATTGAGGAAGCGAAAGCACAAAAGACCATTACAAAAATTAGAAAGTGAGTGGTTTATGTTTCCTCTGTTTTGTTTTTTAAATGACAGTTTTGCTTTGATTGTTTAGTTTTCCAAAGAAGCTCGTAGCTTTAATCCCACAAATGAATTTGATTTCATGTCTTAATCTACTCTTAGATGTTGCTCTTGGAGATGCCACCAATGAAATTAGCCGTGGAGACAATTCAATTAGCTTTTGACACGATTAAAGATGCAACAAGCATAAAAGAACATCTGATTATGCTTCATAATACACCTAATTTTTTGTCATCTGATTATGCTTTCATTTCTCTGTTGCAGTGCTTTTGACAAATCACTTAGAGCACGATTGTTGAAGGTAAAATGTCAAATACAGCTAGACATTATCTTTGATTTTTGAACATTTTTTTTTCTAATTTCTTAGAACTTGATGTTAGAGTGTCGATTCCTTGTTATTTATTGTTAGAACTTGATGTTTTTTTGGGTGTTTGCACGAGTATGGAGTTGCTGAATTGTTGTTAAAATGTGTTTTACCTTGTTAGTTTAGAACTATTTGCGGATTGCCAAGTCCTAAATGAATAAAAAAATGGATGTTATTGTATGTTGAATTCAAACCATCAATTCACAGTGTGTGTTGCAATTTGGAAGTGAATAAGACACTATATGTCAAATCTTTTTAGTTATTTTCTTGTGTTTTTGCTCTTTCATTCATGGCTATTGGAATGTGCATTATGTCTGTACCATCATATATCTTTTTAGTTATCTTTCTATTTCAAAATGCGATGCTTTCAAAATTGTTTTGGTATTTGAAGTGGGCATTGATATTTGACAAAAAAAAAGTGTTTAAAGAATTTGTATGGTTAACATGGTGGATCATGACTATAAATTTGTGAGAAATAGAGTAATACAGGTTCCTATAACTAGCTTTGAATTTGTATGGATGAACATATAGTTACACTTAGTTATATCCTTATATGTTGCTTTGAAAATACAGGATCATTTTTTGTGTGTGTTAAAACATTTTAAAATTTGTTCCAGGGAATCATTGCCCCAAACTGAATTTTCTAGGCCCCGTTTGATACCCATTTGGCTTTTGGTTTTGGTTTTTGAAAATTAGGCTTGTTTTCATCTAATTTCCTTACAATGGTTTTCATCTTTGTTAAGGACAAACTTGAGTTCCTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTCTAGTTTTCAAAACTTGACTTGGTTTTTAAAAACATGAAATGAGGTAGATTAGAAAACAAAGAAACTTACATGTGTAAGTTGTGTTTTTTAAGCTTAATTTTCGAAAACCAAAAACCAAAAACCAAATGATTATCAAACGGGGTCCTAGTGTTTTGATTTCAATTAAAGTACACATTTCTTTTTGTTTTATTTGCTGCCTATTACTTTTTGTTTATTTTTGTGTTTGTGTTACACCATTTTAAGATATGCATTAGTTTGCTTGTAGAGCCTCTCCTGTTTAACTGCACTTTGAGTTGTTCATTGATAATTACAGGTTGAGGGGTTCTTTTCTGTGAAACTTTATTTATATATGTGCTAGTTTTGAATTCTAAATTTTGAATTTGTACTTACAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACATTTGAAATGAACGAGGATGAGATTTTAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGTTGTTTGGATCATCTTCTAATGTACGTGACCTTGAGCGTCGTATTAACGAGTCTGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATCGTTTTGAGGATAAATTTCAAACAATGATGGCAGAGATGCATAAACAATCTGCTAAGAGTTGA

mRNA sequence

ATGGGGTTACAGCAACGGCCGGATCAGATCCTCCGGTGGCTGTCCGGTGGGTTCTGGGGCGGCGGCCTCAAGGAAGAAGAAGAGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGTGGCACTGTCGTCGAAGCCGATATCGACGTCGGCCCCGACGGCGGTGATCGATTTCTCGGCGGAGAAACGTGGGAAAGTCCGGCCGGCGAGCTCCTTAAGTAAATCTAAATATGAAGTGGAGAATTTAGGTGAATGGATACCTTGTTCTGTTGGTGCTAATTTCACACTCCATATCATCACTGTCAACACTGGTGAGGGTCGTTTCGAGATATTGTCGTTGTCGGGATCATTCATGCCGAGCGAGAGTGCAGGAACAAGGAGTAGAACCGGTGGAATGAGCGTCTCCTTAGCAAGTCCAGACGGACGCGTCGTTGGTGGCGGAGTTGCTGGTTTGTTAGTAGCTTCTAGTCCTGTTCAGGTGGTAGTAGGAAGCTTTATATCTGGGAACCAGCATGAGCAAAAGCCGAAGAAGCCGAAACAGGACTTCGTATTACCGGAGTTCGACTGCAGCAAGGGCCCAAGGCTGCTATGCCATGCGACGGACTGCCAAACGAACAACAAATTGCAGCACCTTCAACGGAACAACGAGGCTGACGGAAAGAACTGTAGCAACGCGTCAAACGGTGATGTGATGGATGGCGACGATGAGGTGATGACGATCTTGTGCTCGGTGACCGGTGAGAATAGAGAGACAGAGAGAGCCAGAGAGGAGGAGACAGCGATGTTGGAGGCTGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCGGTTTCAATTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCCACTCGATTACGTTCCAGGGATCATCTACACTCTCCATGCCATCGTCTTCGTTGAGTTCATGCCCGCAGTGATCTTGCTGAGTGCTTTTGACAAATCACTTAGAGCACGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACATTTGAAATGAACGAGGATGAGATTTTAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGTTGTTTGGATCATCTTCTAATGTACGTGACCTTGAGCGTCGTATTAACGAGTCTGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATCGTTTTGAGGATAAATTTCAAACAATGATGGCAGAGATGCATAAACAATCTGCTAAGAGTTGA

Coding sequence (CDS)

ATGGGGTTACAGCAACGGCCGGATCAGATCCTCCGGTGGCTGTCCGGTGGGTTCTGGGGCGGCGGCCTCAAGGAAGAAGAAGAGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGTGGCACTGTCGTCGAAGCCGATATCGACGTCGGCCCCGACGGCGGTGATCGATTTCTCGGCGGAGAAACGTGGGAAAGTCCGGCCGGCGAGCTCCTTAAGTAAATCTAAATATGAAGTGGAGAATTTAGGTGAATGGATACCTTGTTCTGTTGGTGCTAATTTCACACTCCATATCATCACTGTCAACACTGGTGAGGGTCGTTTCGAGATATTGTCGTTGTCGGGATCATTCATGCCGAGCGAGAGTGCAGGAACAAGGAGTAGAACCGGTGGAATGAGCGTCTCCTTAGCAAGTCCAGACGGACGCGTCGTTGGTGGCGGAGTTGCTGGTTTGTTAGTAGCTTCTAGTCCTGTTCAGGTGGTAGTAGGAAGCTTTATATCTGGGAACCAGCATGAGCAAAAGCCGAAGAAGCCGAAACAGGACTTCGTATTACCGGAGTTCGACTGCAGCAAGGGCCCAAGGCTGCTATGCCATGCGACGGACTGCCAAACGAACAACAAATTGCAGCACCTTCAACGGAACAACGAGGCTGACGGAAAGAACTGTAGCAACGCGTCAAACGGTGATGTGATGGATGGCGACGATGAGGTGATGACGATCTTGTGCTCGGTGACCGGTGAGAATAGAGAGACAGAGAGAGCCAGAGAGGAGGAGACAGCGATGTTGGAGGCTGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCGGTTTCAATTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCCACTCGATTACGTTCCAGGGATCATCTACACTCTCCATGCCATCGTCTTCGTTGAGTTCATGCCCGCAGTGATCTTGCTGAGTGCTTTTGACAAATCACTTAGAGCACGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACATTTGAAATGAACGAGGATGAGATTTTAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGTTGTTTGGATCATCTTCTAATGTACGTGACCTTGAGCGTCGTATTAACGAGTCTGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATCGTTTTGAGGATAAATTTCAAACAATGATGGCAGAGATGCATAAACAATCTGCTAAGAGTTGA

Protein sequence

MGLQQRPDQILRWLSGGFWGGGLKEEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTGEGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSPVQVVVGSFISGNQHEQKPKKPKQDFVLPEFDCSKGPRLLCHATDCQTNNKLQHLQRNNEADGKNCSNASNGDVMDGDDEVMTILCSVTGENRETERAREEETAMLEAAVNHSSLGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFVEFMPAVILLSAFDKSLRARLLKSELKSYASQVVDGTFEMNEDEILVFGPEKHGRVRGYGVGVTPELFGSSSNVRDLERRINESEQRLQESERQRKVEVQALKDQIVELENRFEDKFQTMMAEMHKQSAKS

Homology

[Close]

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.4e-53
Identity = 129/223 (57.85%), Postives = 149/223 (66.82%), Query Frame = 0


Query: 21  GGLKEEEEGRPRKYGPDGKLNVVALSSKPISTS-AP-------TAVIDFSA-EKRGKVRP 80
           GGL +++ GRPRKYGPDG   VVALS KPIS++ AP       + VIDFSA EKR KV+P
Sbjct: 85  GGLMKKKRGRPRKYGPDG--TVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKP 144

Query: 81  ASSLSKSKY--EVENLGEWIPCSVGANFTLHIITVNTG---------------------- 140
            +S +++KY  +VENLGEW PCSVG NFT HIITVNTG                      
Sbjct: 145 TNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLS 204

Query: 141 ----------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGR 188
                                 EGRFEILSLSGSFMP++S GTRSRTGGMSVSLASPDGR
Sbjct: 205 ANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGR 264

[Close]

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.2e-46
Identity = 120/223 (53.81%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 17  GFWGGGLKEEEEGRPRKYGPDGKLNVVALSSKPISTSAPTA--VIDFS--AEKRGKVRPA 76
           GF  G +K +  GRPRKYG DG    V LS  PIS++APT   VIDFS  +EKRGK++PA
Sbjct: 65  GFSSGPIK-KRRGRPRKYGHDGA--AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPA 124

Query: 77  ----SSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTG--------------------- 136
               SS  + KY+VENLGEW P S  ANFT HIITVN G                     
Sbjct: 125 TPTPSSFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVL 184

Query: 137 -----------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDG 187
                                  EGRFEILSLSG+FMPS+S GTRSRTGGMSVSLASPDG
Sbjct: 185 CANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDG 244

[Close]

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot
Match: Q9SB31 (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.4e-28
Identity = 85/206 (41.26%), Postives = 106/206 (51.46%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASS---------- 84
           +++ GRPRKY PDG L VV LS  PIS+S P    +F   KRG+ R  S+          
Sbjct: 86  KKKRGRPRKYNPDGTL-VVTLSPMPISSSVP-LTSEFPPRKRGRGRGKSNRWLKKSQMFQ 145

Query: 85  LSKSKYEVENLGEWIPCSVGANFTLHIITVNTG--------------------------- 144
             +S  +    G      VGANFT H++ VN G                           
Sbjct: 146 FDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRAICILSANGPI 205

Query: 145 -----------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGG 177
                            EGRFEILSL+GSFM ++S GTRSR GGMSV LA PDGRV GGG
Sbjct: 206 SNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLAGPDGRVFGGG 265

[Close]

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot
Match: Q9LVB0 (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.2e-27
Identity = 91/219 (41.55%), Postives = 113/219 (51.60%), Query Frame = 0


Query: 20  GGGLKEEEEGRPRKYGPDGKLNV----VALSSKPISTSAPTAVIDFSAEKRGKV----RP 79
           G    +++ GRPRKY PDG LN       LS  PIS+S P +  D+   KRGK     +P
Sbjct: 71  GSDPTKKKRGRPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSG-DYQ-WKRGKAQQQHQP 130

Query: 80  ASSLSKS-KYEVENLGEWIP-----CSVGANFTLHIITVNTG------------------ 139
              + KS K+E  +     P     C VGANFT H  TVN G                  
Sbjct: 131 LEFVKKSHKFEYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAI 190

Query: 140 --------------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLAS 181
                                     EGRFEILSLSGSFMP+E+ GT+ R GGMS+SLA 
Sbjct: 191 CILSATGSISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAG 250

[Close]

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot
Match: Q9FHM5 (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.7e-25
Identity = 86/230 (37.39%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEK----------RGKVRPASS 84
           +++ GRPRKY PDG L  V LS  PIS+S P    +F + K          RG+ R    
Sbjct: 78  KKKRGRPRKYNPDGSL-AVTLSPMPISSSVP-LTSEFGSRKRGRGRGRGRGRGRGRGQGQ 137

Query: 85  LSKSKYEVENLGEWI------------PCS--------VGANFTLHIITVNTG------- 144
            S+      N   W+            P S        V  +FT H++TVN G       
Sbjct: 138 GSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKI 197

Query: 145 -------------------------------------EGRFEILSLSGSFMPSESAGTRS 181
                                                EG FEILSL+GSF+PSES GTRS
Sbjct: 198 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRS 257

[Close]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL
Match: A0A0A0KL67 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G010650 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.1e-65
Identity = 149/234 (63.68%), Postives = 161/234 (68.80%), Query Frame = 0


Query: 6   RPDQILRWLSGGFWGGGLKE---EEEGRPRKYGPDGKLNVVALSSKPISTS--APTAVID 65
           RP+       GG   G   E   ++ GRPRKYGPDGKLNV ALS KPIS S  AP AVID
Sbjct: 22  RPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVID 81

Query: 66  FSAEKRGKVRPASSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTG------------- 125
           FSAEKRGKVRPASSL+K+KYEVENLGEW+PCSVGANFT HIITV++G             
Sbjct: 82  FSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQ 141

Query: 126 -------------------------------EGRFEILSLSGSFMPSESAGTRSRTGGMS 185
                                          EGRFEILSLSGSFMPS+S GT+SR GGMS
Sbjct: 142 GPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSIGTKSRIGGMS 201

Query: 186 VSLASPDGRVVGGGVAGLLVASSPVQVVVGSFISGNQHEQKPKKPKQDFVLPEF 191
           VSLASPDGRVVGGGVAGLLVA+SPVQVVVGSFISGNQHEQKPKKPK D VLP +
Sbjct: 202 VSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKPKHDVVLPVY 255

[Close]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL
Match: A0A2P5C8M2 (AT-hook motif nuclear-localized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_173320 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.6e-60
Identity = 131/206 (63.59%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVEN 84
           +++ GRPRKYGPDG +  +ALS KPIS+SAP  +IDFSAEKRGKVRPASS+SK+KYE+EN
Sbjct: 66  KKKRGRPRKYGPDGSV-TMALSPKPISSSAPPPIIDFSAEKRGKVRPASSVSKTKYELEN 125

Query: 85  LGEWIPCSVGANFTLHIITVNTG------------------------------------- 144
           LGEW+ CSVGANFT HIITVNTG                                     
Sbjct: 126 LGEWVACSVGANFTPHIITVNTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDS 185

Query: 145 -------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSP 187
                  EGRFEILSLSGSFMP+E+AGTRSR+GGMSVSLASPDGRVVGGGVAGLLVA+SP
Sbjct: 186 SGGTLTYEGRFEILSLSGSFMPNETAGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASP 245

[Close]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL
Match: A0A2P5F519 (AT-hook motif nuclear-localized protein OS=Trema orientale OX=63057 GN=TorRG33x02_111650 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.6e-60
Identity = 131/206 (63.59%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVEN 84
           +++ GRPRKYGPDG +  +ALS KPIS+SAP  +IDFSAEKRGKVRPASS+SK+KYE+EN
Sbjct: 66  KKKRGRPRKYGPDGSV-TMALSPKPISSSAPPPIIDFSAEKRGKVRPASSVSKTKYELEN 125

Query: 85  LGEWIPCSVGANFTLHIITVNTG------------------------------------- 144
           LGEW+ CSVGANFT HIITVNTG                                     
Sbjct: 126 LGEWVACSVGANFTPHIITVNTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDS 185

Query: 145 -------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSP 187
                  EGRFEILSLSGSFMP+E+AGTRSR+GGMSVSLASPDGRVVGGGVAGLLVA+SP
Sbjct: 186 SGGTLTYEGRFEILSLSGSFMPNETAGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASP 245

[Close]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL
Match: A0A5A7TMP3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003500 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.3e-59
Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVEN 84
           +++ GRPRKYGPDG ++ +ALS KPIS+S P  VIDFS EK+GKVRP S++SKSK+EV+N
Sbjct: 74  KKKRGRPRKYGPDGSVS-MALSPKPISSSVPPPVIDFSTEKKGKVRPVSAVSKSKFEVDN 133

Query: 85  LGEWIPCSVGANFTLHIITVNTG------------------------------------- 144
           LG+W+PCS+GANFT HIITVN G                                     
Sbjct: 134 LGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDS 193

Query: 145 -------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSP 189
                  EGRFEILSLSGSFMPS++ GTRSR+GGMSVSLASPDGRVVGGGVAGLLVA+SP
Sbjct: 194 SGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASP 253

[Close]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL
Match: A0A1S3ATC1 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.3e-59
Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVEN 84
           +++ GRPRKYGPDG ++ +ALS KPIS+S P  VIDFS EK+GKVRP S++SKSK+EV+N
Sbjct: 74  KKKRGRPRKYGPDGSVS-MALSPKPISSSVPPPVIDFSTEKKGKVRPVSAVSKSKFEVDN 133

Query: 85  LGEWIPCSVGANFTLHIITVNTG------------------------------------- 144
           LG+W+PCS+GANFT HIITVN G                                     
Sbjct: 134 LGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDS 193

Query: 145 -------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSP 189
                  EGRFEILSLSGSFMPS++ GTRSR+GGMSVSLASPDGRVVGGGVAGLLVA+SP
Sbjct: 194 SGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASP 253

[Close]

BLAST of Lcy09g017900 vs. NCBI nr
Match: XP_022923290.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita moschata] >KAG7015637.1 AT-hook motif nuclear-localized protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 9.8e-66
Identity = 143/210 (68.10%), Postives = 155/210 (73.81%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAP--TAVIDFSAEKRGKVRPASSLSKSKYEV 84
           +++ GRPRKYGPDGKLN  ALS KPISTSAP  +AVIDFSAEKRGKVRPASSLSK+KYE 
Sbjct: 45  KKKRGRPRKYGPDGKLNAAALSPKPISTSAPARSAVIDFSAEKRGKVRPASSLSKTKYET 104

Query: 85  ENLGEWIPCSVGANFTLHIITVNTG----------------------------------- 144
           ENLGEW+PCSVGANFT HIITVNTG                                   
Sbjct: 105 ENLGEWVPCSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQP 164

Query: 145 ---------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAS 189
                    EGRFEILSLSGSFMPS++AGT+SRTGGMSVSLASPDGR+VGGGV GLLVA+
Sbjct: 165 DSSGGTLTYEGRFEILSLSGSFMPSDNAGTKSRTGGMSVSLASPDGRIVGGGVVGLLVAA 224

[Close]

BLAST of Lcy09g017900 vs. NCBI nr
Match: XP_004149134.3 (AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >XP_031741147.1 AT-hook motif nuclear-localized protein 1-like [Cucumis sativus] >XP_031741148.1 AT-hook motif nuclear-localized protein 1-like [Cucumis sativus] >XP_031745801.1 AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KAE8637285.1 hypothetical protein CSA_004537 [Cucumis sativus] >KAE8648154.1 hypothetical protein Csa_018367 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 8.3e-65
Identity = 149/232 (64.22%), Postives = 160/232 (68.97%), Query Frame = 0


Query: 6   RPDQILRWLSGGFWGGGLKE---EEEGRPRKYGPDGKLNVVALSSKPISTS--APTAVID 65
           RP+       GG   G   E   ++ GRPRKYGPDGKLNV ALS KPIS S  AP AVID
Sbjct: 22  RPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVID 81

Query: 66  FSAEKRGKVRPASSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTG------------- 125
           FSAEKRGKVRPASSL+K+KYEVENLGEW+PCSVGANFT HIITV++G             
Sbjct: 82  FSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQ 141

Query: 126 -------------------------------EGRFEILSLSGSFMPSESAGTRSRTGGMS 185
                                          EGRFEILSLSGSFMPS+S GT+SR GGMS
Sbjct: 142 GPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSIGTKSRIGGMS 201

Query: 186 VSLASPDGRVVGGGVAGLLVASSPVQVVVGSFISGNQHEQKPKKPKQDFVLP 189
           VSLASPDGRVVGGGVAGLLVA+SPVQVVVGSFISGNQHEQKPKKPK D VLP
Sbjct: 202 VSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKPKHDVVLP 253

[Close]

BLAST of Lcy09g017900 vs. NCBI nr
Match: XP_023553233.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 9.2e-64
Identity = 140/210 (66.67%), Postives = 154/210 (73.33%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAP--TAVIDFSAEKRGKVRPASSLSKSKYEV 84
           +++ GRPRKYGPDGKLN+ ALS KPIS SAP  +AVIDFSAEKRGKVRPASSLSK+K+E 
Sbjct: 45  KKKRGRPRKYGPDGKLNLAALSPKPISASAPARSAVIDFSAEKRGKVRPASSLSKTKHET 104

Query: 85  ENLGEWIPCSVGANFTLHIITVNTG----------------------------------- 144
           ENLGEW+PCSVGANFT HIITVNTG                                   
Sbjct: 105 ENLGEWVPCSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQP 164

Query: 145 ---------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAS 189
                    EGRFEILSLSGSFMPS++AGT+SRTGGMSVSLASPDGR+VGGGV GLLVA+
Sbjct: 165 DSSGGTLTYEGRFEILSLSGSFMPSDNAGTKSRTGGMSVSLASPDGRIVGGGVVGLLVAA 224

[Close]

BLAST of Lcy09g017900 vs. NCBI nr
Match: XP_038893099.1 (AT-hook motif nuclear-localized protein 1-like [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-63
Identity = 142/210 (67.62%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTS--APTAVIDFSAEKRGKVRPASSLSKSKYEV 84
           +++ GRPRKYGPDGKLNV ALS KPIS S  AP AVIDFSAEKRGKVRPASSL+K+KYEV
Sbjct: 44  KKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEV 103

Query: 85  ENLGEWIPCSVGANFTLHIITVNTG----------------------------------- 144
           ENLGEW+PCSVGANFT HIITVNTG                                   
Sbjct: 104 ENLGEWVPCSVGANFTPHIITVNTGEDVTMKILSFSQQGPRAICILSANGVISSVTLRQP 163

Query: 145 ---------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAS 189
                    EGRFEILSLSGSFMPS+S GT+SR GGMSVSLASPDGRVVGGGVAGLLVA+
Sbjct: 164 DSSGGTLTYEGRFEILSLSGSFMPSDSVGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAA 223

[Close]

BLAST of Lcy09g017900 vs. NCBI nr
Match: XP_022965130.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima])

HSP 1 Score: 253.8 bits (647), Expect = 2.7e-63
Identity = 139/210 (66.19%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAP--TAVIDFSAEKRGKVRPASSLSKSKYEV 84
           +++ GRPRKYGPDGKLNV ALS KP+S SAP  +AVIDFSAEKRGKVRPASSLSK+KYE 
Sbjct: 44  KKKRGRPRKYGPDGKLNVAALSPKPLSASAPARSAVIDFSAEKRGKVRPASSLSKTKYET 103

Query: 85  ENLGEWIPCSVGANFTLHIITVNTG----------------------------------- 144
           ENLGEW+PCSVGANFT HIITVNTG                                   
Sbjct: 104 ENLGEWVPCSVGANFTPHIITVNTGEDVTMKVLAFSQQGPRAICILSANGVISSVTLRQP 163

Query: 145 ---------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAS 189
                    EGRFEILSLSGSFMPS++AGT+SRTGGMSVSLASP+GR+VGGGV GLLVA+
Sbjct: 164 DSSGGTLTYEGRFEILSLSGSFMPSDNAGTKSRTGGMSVSLASPNGRIVGGGVVGLLVAA 223

[Close]

BLAST of Lcy09g017900 vs. TAIR 10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1 )

HSP 1 Score: 210.3 bits (534), Expect = 3.1e-54
Identity = 129/223 (57.85%), Postives = 149/223 (66.82%), Query Frame = 0


Query: 21  GGLKEEEEGRPRKYGPDGKLNVVALSSKPISTS-AP-------TAVIDFSA-EKRGKVRP 80
           GGL +++ GRPRKYGPDG   VVALS KPIS++ AP       + VIDFSA EKR KV+P
Sbjct: 85  GGLMKKKRGRPRKYGPDG--TVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKP 144

Query: 81  ASSLSKSKY--EVENLGEWIPCSVGANFTLHIITVNTG---------------------- 140
            +S +++KY  +VENLGEW PCSVG NFT HIITVNTG                      
Sbjct: 145 TNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLS 204

Query: 141 ----------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGR 188
                                 EGRFEILSLSGSFMP++S GTRSRTGGMSVSLASPDGR
Sbjct: 205 ANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGR 264

[Close]

BLAST of Lcy09g017900 vs. TAIR 10
Match: AT4G22770.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-47
Identity = 120/223 (53.81%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 17  GFWGGGLKEEEEGRPRKYGPDGKLNVVALSSKPISTSAPTA--VIDFS--AEKRGKVRPA 76
           GF  G +K +  GRPRKYG DG    V LS  PIS++APT   VIDFS  +EKRGK++PA
Sbjct: 65  GFSSGPIK-KRRGRPRKYGHDGA--AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPA 124

Query: 77  ----SSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTG--------------------- 136
               SS  + KY+VENLGEW P S  ANFT HIITVN G                     
Sbjct: 125 TPTPSSFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVL 184

Query: 137 -----------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDG 187
                                  EGRFEILSLSG+FMPS+S GTRSRTGGMSVSLASPDG
Sbjct: 185 CANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDG 244

[Close]

BLAST of Lcy09g017900 vs. TAIR 10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-29
Identity = 85/206 (41.26%), Postives = 106/206 (51.46%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASS---------- 84
           +++ GRPRKY PDG L VV LS  PIS+S P    +F   KRG+ R  S+          
Sbjct: 86  KKKRGRPRKYNPDGTL-VVTLSPMPISSSVP-LTSEFPPRKRGRGRGKSNRWLKKSQMFQ 145

Query: 85  LSKSKYEVENLGEWIPCSVGANFTLHIITVNTG--------------------------- 144
             +S  +    G      VGANFT H++ VN G                           
Sbjct: 146 FDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRAICILSANGPI 205

Query: 145 -----------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGG 177
                            EGRFEILSL+GSFM ++S GTRSR GGMSV LA PDGRV GGG
Sbjct: 206 SNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLAGPDGRVFGGG 265

[Close]

BLAST of Lcy09g017900 vs. TAIR 10
Match: AT5G62260.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 124.0 bits (310), Expect = 3.0e-28
Identity = 91/219 (41.55%), Postives = 113/219 (51.60%), Query Frame = 0


Query: 20  GGGLKEEEEGRPRKYGPDGKLNV----VALSSKPISTSAPTAVIDFSAEKRGKV----RP 79
           G    +++ GRPRKY PDG LN       LS  PIS+S P +  D+   KRGK     +P
Sbjct: 71  GSDPTKKKRGRPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSG-DYQ-WKRGKAQQQHQP 130

Query: 80  ASSLSKS-KYEVENLGEWIP-----CSVGANFTLHIITVNTG------------------ 139
              + KS K+E  +     P     C VGANFT H  TVN G                  
Sbjct: 131 LEFVKKSHKFEYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAI 190

Query: 140 --------------------------EGRFEILSLSGSFMPSESAGTRSRTGGMSVSLAS 181
                                     EGRFEILSLSGSFMP+E+ GT+ R GGMS+SLA 
Sbjct: 191 CILSATGSISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAG 250

[Close]

BLAST of Lcy09g017900 vs. TAIR 10
Match: AT5G51590.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 116.3 bits (290), Expect = 6.2e-26
Identity = 86/230 (37.39%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 25  EEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEK----------RGKVRPASS 84
           +++ GRPRKY PDG L  V LS  PIS+S P    +F + K          RG+ R    
Sbjct: 78  KKKRGRPRKYNPDGSL-AVTLSPMPISSSVP-LTSEFGSRKRGRGRGRGRGRGRGRGQGQ 137

Query: 85  LSKSKYEVENLGEWI------------PCS--------VGANFTLHIITVNTG------- 144
            S+      N   W+            P S        V  +FT H++TVN G       
Sbjct: 138 GSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKI 197

Query: 145 -------------------------------------EGRFEILSLSGSFMPSESAGTRS 181
                                                EG FEILSL+GSF+PSES GTRS
Sbjct: 198 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRS 257

The following BLAST results are available for this feature:

BLAST of Lcy09g017900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYJ2	4.4e-53	57.85	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O49658	5.2e-46	53.81	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9SB31	8.4e-28	41.26	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9LVB0	4.2e-27	41.55	AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9FHM5	8.7e-25	37.39	AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of Lcy09g017900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL67	3.1e-65	63.68	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G0106...	[more]
A0A2P5C8M2	6.6e-60	63.59	AT-hook motif nuclear-localized protein OS=Parasponia andersonii OX=3476 GN=PanW...	[more]
A0A2P5F519	6.6e-60	63.59	AT-hook motif nuclear-localized protein OS=Trema orientale OX=63057 GN=TorRG33x0...	[more]
A0A5A7TMP3	7.3e-59	61.54	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3ATC1	7.3e-59	61.54	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 ...	[more]

BLAST of Lcy09g017900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923290.1	9.8e-66	68.10	AT-hook motif nuclear-localized protein 1-like [Cucurbita moschata] >KAG7015637....	[more]
XP_004149134.3	8.3e-65	64.22	AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >XP_031741147.1 AT-h...	[more]
XP_023553233.1	9.2e-64	66.67	AT-hook motif nuclear-localized protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038893099.1	1.2e-63	67.62	AT-hook motif nuclear-localized protein 1-like [Benincasa hispida]	[more]
XP_022965130.1	2.7e-63	66.19	AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima]	[more]

BLAST of Lcy09g017900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12080.1	3.1e-54	57.85	AT-hook motif nuclear-localized protein 1	[more]
AT4G22770.1	3.7e-47	53.81	AT hook motif DNA-binding family protein	[more]
AT4G25320.1	6.0e-29	41.26	AT hook motif DNA-binding family protein	[more]
AT5G62260.1	3.0e-28	41.55	AT hook motif DNA-binding family protein	[more]
AT5G51590.1	6.2e-26	37.39	AT hook motif DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 385..430
None	No IPR available	GENE3D	3.30.1330.80		coord: 89..184 e-value: 1.4E-12 score: 49.7
None	No IPR available	PANTHER	PTHR31500:SF93	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1	coord: 108..184
None	No IPR available	PANTHER	PTHR31500:SF93	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1	coord: 25..108
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 106..174
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 100..168 e-value: 1.1E-13 score: 51.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 35..193 score: 16.226225
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 108..168 e-value: 3.78824E-7 score: 46.4246
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 25..108
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 108..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g017900.1	Lcy09g017900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding