Lcy09g016360 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAAAGTGGAGGAAAATAGAAGTTTGAAAGATATGAAAGAAAGAATGAGAAATCAAAATTTGTTGTGGGCTTTTGTGTGGGTGATTTTGGTGTGGAAGCAAAGTGGAGTGGTGGAATGTAATACAGATTTATGCAAGTCAATTGAGTTTGCTTTGAACATGGAATTCCTTAAAGCTGAGTTCTTATTGAATGGAGCCCTTGGAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATCGAAGAATTTGCGTATCAAGAAGTTGGACACATAAGGTCTCTCTAGCCCGCTCTCGAATTTAGGATAGAAAACTCGGAGAATCAAAGAATAATACTTGTTTGATAAACGTCTCTCTTAATTAGGATATATGTCTTAACCAGTTGACTTGTCCTATATTTGTGGTGTTGTTTTTGTGTGTGTGTTTTCAGATCCATGAAGAACGCAACTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAAAGCATTAGCGGATATGGTTGATAAAGCAGTTGGCTACAAACTCAGTCCTCCATTCGACGCTTATGCCAATTCTATCAACTTTCTCCTTGCCGCAAAGATCATCGCTTACTTCGGACTCAACGGCTACGTCGGAACGACAACCCCACAACTCGTCCTTCCCAAATCTCACAGCGTAAGAAAAAAAAGAAACAAAAAACCATAATTCCTTCCATTCTTGTGATCATCATCATCAATTCATGTCGCTAAATCTCACCTAAGTTGGTACTATAAAATTTTTGGCAGTTGATGGCAAAGCTGCTCGACGTGGAGGCCGGACAAGACCGAGAAAATTTGTACTTGAAACTTGATGGCATGGTGGTTCCTTACAATATAACTGTTGCTCGCTTCACCAACCTGATCACCTCGGAACTGTTCAATCGACTCGGCTATTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGACGGAGAAGAATCGAACAGAGAGCAACGTTCTCGCTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAACCGACGATGAGCCTAGAGCAACTGGTAGGATCGTCCTCGAAGGTGTTGGTCTAAAAATTGTTGGACAATGGGTACTTAGATAACTAAGTCAACTCACGATATAAATAAAAGGGATCAATAGTCCATAAATATGATATCATATATAGCATATGTAGAC ATGCAAAAAGTGGAGGAAAATAGAAGTTTGAAAGATATGAAAGAAAGAATGAGAAATCAAAATTTGTTGTGGGCTTTTGTGTGGGTGATTTTGGTGTGGAAGCAAAGTGGAGTGGTGGAATGTAATACAGATTTATGCAAGTCAATTGAGTTTGCTTTGAACATGGAATTCCTTAAAGCTGAGTTCTTATTGAATGGAGCCCTTGGAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATCGAAGAATTTGCGTATCAAGAAGTTGGACACATAAGATCCATGAAGAACGCAACTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAAAGCATTAGCGGATATGGTTGATAAAGCAGTTGGCTACAAACTCAGTCCTCCATTCGACGCTTATGCCAATTCTATCAACTTTCTCCTTGCCGCAAAGATCATCGCTTACTTCGGACTCAACGGCTACGTCGGAACGACAACCCCACAACTCGTCCTTCCCAAATCTCACAGCTTGATGGCAAAGCTGCTCGACGTGGAGGCCGGACAAGACCGAGAAAATTTGTACTTGAAACTTGATGGCATGGTGGTTCCTTACAATATAACTGTTGCTCGCTTCACCAACCTGATCACCTCGGAACTGTTCAATCGACTCGGCTATTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGACGGAGAAGAATCGAACAGAGAGCAACGTTCTCGCTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAACCGACGATGAGCCTAGAGCAACTGGTAGGATCGTCCTCGAAGGTGTTGGTCTAAAAATTGTTGGACAATGGGTACTTAGATAACTAAGTCAACTCACGATATAAATAAAAGGGATCAATAGTCCATAAATATGATATCATATATAGCATATGTAGAC ATGCAAAAAGTGGAGGAAAATAGAAGTTTGAAAGATATGAAAGAAAGAATGAGAAATCAAAATTTGTTGTGGGCTTTTGTGTGGGTGATTTTGGTGTGGAAGCAAAGTGGAGTGGTGGAATGTAATACAGATTTATGCAAGTCAATTGAGTTTGCTTTGAACATGGAATTCCTTAAAGCTGAGTTCTTATTGAATGGAGCCCTTGGAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATCGAAGAATTTGCGTATCAAGAAGTTGGACACATAAGATCCATGAAGAACGCAACTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAAAGCATTAGCGGATATGGTTGATAAAGCAGTTGGCTACAAACTCAGTCCTCCATTCGACGCTTATGCCAATTCTATCAACTTTCTCCTTGCCGCAAAGATCATCGCTTACTTCGGACTCAACGGCTACGTCGGAACGACAACCCCACAACTCGTCCTTCCCAAATCTCACAGCTTGATGGCAAAGCTGCTCGACGTGGAGGCCGGACAAGACCGAGAAAATTTGTACTTGAAACTTGATGGCATGGTGGTTCCTTACAATATAACTGTTGCTCGCTTCACCAACCTGATCACCTCGGAACTGTTCAATCGACTCGGCTATTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGACGGAGAAGAATCGAACAGAGAGCAACGTTCTCGCTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAACCGACGATGAGCCTAGAGCAACTGGTAGGATCGTCCTCGAAGGTGTTGGTCTAAAAATTGTTGGACAATGGGTACTTAGATAA MQKVEENRSLKDMKERMRNQNLLWAFVWVILVWKQSGVVECNTDLCKSIEFALNMEFLKAEFLLNGALGKGLDAIDSALASGGPPPIGAQIANLDPHTRPIIEEFAYQEVGHIRSMKNATGGGFPRPLLDLSKKALADMVDKAVGYKLSPPFDAYANSINFLLAAKIIAYFGLNGYVGTTTPQLVLPKSHSLMAKLLDVEAGQDRENLYLKLDGMVVPYNITVARFTNLITSELFNRLGYCSIKDEELIVPQSLGTEKNRTESNVLAARTPQEIMRIMYGTDDEPRATGRIVLEGVGLKIVGQWVLR Homology
BLAST of Lcy09g016360 vs. ExPASy Swiss-Prot
Match: P22242 (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 6.9e-53 Identity = 122/238 (51.26%), Postives = 149/238 (62.61%), Query Frame = 0
BLAST of Lcy09g016360 vs. ExPASy TrEMBL
Match: B9GGY2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G380000 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67 Identity = 150/260 (57.69%), Postives = 180/260 (69.23%), Query Frame = 0
BLAST of Lcy09g016360 vs. ExPASy TrEMBL
Match: A0A6N2LFT0 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS226814 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67 Identity = 148/260 (56.92%), Postives = 180/260 (69.23%), Query Frame = 0
BLAST of Lcy09g016360 vs. ExPASy TrEMBL
Match: A0A4U5PY80 (Desiccation-related protein PCC13-62 OS=Populus alba OX=43335 GN=D5086_0000167840 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 155/272 (56.99%), Postives = 182/272 (66.91%), Query Frame = 0
BLAST of Lcy09g016360 vs. ExPASy TrEMBL
Match: A0A6P5ZZR3 (desiccation-related protein PCC13-62-like OS=Durio zibethinus OX=66656 GN=LOC111305091 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 152/300 (50.67%), Postives = 197/300 (65.67%), Query Frame = 0
BLAST of Lcy09g016360 vs. ExPASy TrEMBL
Match: A0A5N5JVJ2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_025634 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66 Identity = 147/260 (56.54%), Postives = 179/260 (68.85%), Query Frame = 0
BLAST of Lcy09g016360 vs. NCBI nr
Match: XP_031282667.1 (desiccation-related protein PCC13-62-like [Pistacia vera]) HSP 1 Score: 268.1 bits (684), Expect = 9.5e-68 Identity = 158/287 (55.05%), Postives = 192/287 (66.90%), Query Frame = 0
BLAST of Lcy09g016360 vs. NCBI nr
Match: KAG6790340.1 (hypothetical protein POTOM_006489 [Populus tomentosa]) HSP 1 Score: 268.1 bits (684), Expect = 9.5e-68 Identity = 156/272 (57.35%), Postives = 182/272 (66.91%), Query Frame = 0
BLAST of Lcy09g016360 vs. NCBI nr
Match: XP_031280566.1 (desiccation-related protein PCC13-62-like [Pistacia vera]) HSP 1 Score: 267.7 bits (683), Expect = 1.2e-67 Identity = 157/287 (54.70%), Postives = 193/287 (67.25%), Query Frame = 0
BLAST of Lcy09g016360 vs. NCBI nr
Match: KAG6790341.1 (hypothetical protein POTOM_006490 [Populus tomentosa]) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-67 Identity = 155/272 (56.99%), Postives = 182/272 (66.91%), Query Frame = 0
BLAST of Lcy09g016360 vs. NCBI nr
Match: KAF9867411.1 (hypothetical protein H0E87_026224 [Populus deltoides]) HSP 1 Score: 266.2 bits (679), Expect = 3.6e-67 Identity = 151/260 (58.08%), Postives = 180/260 (69.23%), Query Frame = 0
BLAST of Lcy09g016360 vs. TAIR 10
Match: AT3G62730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 241.9 bits (616), Expect = 6.8e-64 Identity = 142/271 (52.40%), Postives = 178/271 (65.68%), Query Frame = 0
BLAST of Lcy09g016360 vs. TAIR 10
Match: AT1G47980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 233.4 bits (594), Expect = 2.4e-61 Identity = 133/255 (52.16%), Postives = 169/255 (66.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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