Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGACTGTTTGTTGGGATGTTCGTGGACTGGGAAGTCCATGGGCATTCCGAAATATAAGTGATGAATTATCTCGCTTAAATCCCCAACTATGTTTTCTTTCAGAGACCAAATGTTCGTCTCCTGCTTTGAATAAATTAAAGAATCGTTTGAATTTTTCTGGGTGTTTTGTTGTGAATAGAGTTGGCTTGAGTGGTGGCTTATGTCTCTTATGGAAAGATGATATTGAAGTTTCAATTATAAATTATTTCATCCATCACATTGATGCTGATATTGTTTGGAATGATAAACATGGGAGATTTACCGGAATATATGGTCAACCCAGCTCTGATCAACGAGCTCAAACGTGGGAACTCATCAGCAGACTTCACAACTACTATGATTCTGCATGGGTTATTGGAGGCGATTTCAATGAAATCCTTTGGGATTATGAGAAGTCGGGAGGACCTACTCGAGTGCAACTTCTAATTCACAATTTCAGAGCTACTTTGGATGACTATAACTTGTTGGATTTGAGATTTCTCGATAGGACCTATACATGGTGTAATAGAAGAGAAATGGGTGACCAAGTAAGCTTAAGACTGGATCGTTTTCTGGCCAATCCAAGCTTCACTTCCCTATTCCATCGCTATCAGGTTACAAATCTAGACTGGGCGAAGTCTGATCATAGACCAATCAAATTGTGTCTAGATGTCTATACGAAAAAAGGTCCGAATAGAAGAGGTTCCCGTTCTTTCAAGTTTGAGGAATGTTGGACTCATTAGGCAGAATTTAAATCCATTGTAGCAAGTTCTGGCACTTGGAATGGAAAGGGTGAGGTTAGCAATTTGTTACATCAGGCCCTGAAGAAATGTGCATAAGCTTTGCAAGGATGGGGTCAATGACAGAACAGAGACTTGAGATCAAACATAAAACGGTTAAAGGAACAAATTAAATTAGCATATTCCAGGCCGTTACCATTAGACTTGTCGTCATTCACCAGATGGAACATCAACTTGATGGTTTTCTACATTAGGAGGAAATGTATTGGAAACAGAGATCGCGAGAGAATTGGCTCTAGTGGGGGATAGGAATACGAAATGGTTCCACCAGAAAGCTTCTAGTAGGAGGAAGAGGAATTTTATCAATGGAGTGGTGGATGCTACTGGTTCCTGGCAGACTGAGTCATCATCTATTCAAGAGACTTTTGAGAGGTATTATGTTGAGCTTTTCTGCTCTACAAACCCATGA
mRNA sequence
ATGAGGACTGTTTGTTGGGATGTTCGTGGACTGGGAAGTCCATGGGCATTCCGAAATATAAGTGATGAATTATCTCGCTTAAATCCCCAACTATGTTTTCTTTCAGAGACCAAATGTTCGTCTCCTGCTTTGAATAAATTAAAGAATCGTTTGAATTTTTCTGGGTGTTTTGTTGTGAATAGAGTTGGCTTGAGTGGTGGCTTATGTCTCTTATGGAAAGATGATATTGAAGTTTCAATTATAAATTATTTCATCCATCACATTGATGCTGATATTGTTTGGAATGATAAACATGGGAGATTTACCGGAATATATGGTCAACCCAGCTCTGATCAACGAGCTCAAACGTGGGAACTCATCAGCAGACTTCACAACTACTATGATTCTGCATGGGTTATTGGAGGCGATTTCAATGAAATCCTTTGGGATTATGAGAAGTCGGGAGGACCTACTCGAGTGCAACTTCTAATTCACAATTTCAGAGCTACTTTGGATGACTATAACTTGTTGGATTTGAGATTTCTCGATAGGACCTATACATGGTGTAATAGAAGAGAAATGGGTGACCAAGTAAGCTTAAGACTGGATCGTTTTCTGGCCAATCCAAGCTTCACTTCCCTATTCCATCGCTATCAGGTTACAAATCTAGACTGGGCGAAGTCTGATCATAGACCAATCAAATTGTGTCTAGATGTCTATACGAAAAAAGGAGGAAATGTATTGGAAACAGAGATCGCGAGAGAATTGGCTCTAGTGGGGGATAGGAATACGAAATGGTTCCACCAGAAAGCTTCTAGTAGGAGGAAGAGGAATTTTATCAATGGAGTGGTGGATGCTACTGGTTCCTGGCAGACTGAGTCATCATCTATTCAAGAGACTTTTGAGAGGTATTATGTTGAGCTTTTCTGCTCTACAAACCCATGA
Coding sequence (CDS)
ATGAGGACTGTTTGTTGGGATGTTCGTGGACTGGGAAGTCCATGGGCATTCCGAAATATAAGTGATGAATTATCTCGCTTAAATCCCCAACTATGTTTTCTTTCAGAGACCAAATGTTCGTCTCCTGCTTTGAATAAATTAAAGAATCGTTTGAATTTTTCTGGGTGTTTTGTTGTGAATAGAGTTGGCTTGAGTGGTGGCTTATGTCTCTTATGGAAAGATGATATTGAAGTTTCAATTATAAATTATTTCATCCATCACATTGATGCTGATATTGTTTGGAATGATAAACATGGGAGATTTACCGGAATATATGGTCAACCCAGCTCTGATCAACGAGCTCAAACGTGGGAACTCATCAGCAGACTTCACAACTACTATGATTCTGCATGGGTTATTGGAGGCGATTTCAATGAAATCCTTTGGGATTATGAGAAGTCGGGAGGACCTACTCGAGTGCAACTTCTAATTCACAATTTCAGAGCTACTTTGGATGACTATAACTTGTTGGATTTGAGATTTCTCGATAGGACCTATACATGGTGTAATAGAAGAGAAATGGGTGACCAAGTAAGCTTAAGACTGGATCGTTTTCTGGCCAATCCAAGCTTCACTTCCCTATTCCATCGCTATCAGGTTACAAATCTAGACTGGGCGAAGTCTGATCATAGACCAATCAAATTGTGTCTAGATGTCTATACGAAAAAAGGAGGAAATGTATTGGAAACAGAGATCGCGAGAGAATTGGCTCTAGTGGGGGATAGGAATACGAAATGGTTCCACCAGAAAGCTTCTAGTAGGAGGAAGAGGAATTTTATCAATGGAGTGGTGGATGCTACTGGTTCCTGGCAGACTGAGTCATCATCTATTCAAGAGACTTTTGAGAGGTATTATGTTGAGCTTTTCTGCTCTACAAACCCATGA
Protein sequence
MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVNRVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWNDKHGRFTGIYGQPSSDQRAQTWELISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRTYTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKLCLDVYTKKGGNVLETEIARELALVGDRNTKWFHQKASSRRKRNFINGVVDATGSWQTESSSIQETFERYYVELFCSTNP
Homology
BLAST of Lcy09g015190 vs. ExPASy TrEMBL
Match:
A0A803PC18 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 3.1e-48
Identity = 120/350 (34.29%), Postives = 171/350 (48.86%), Query Frame = 0
Query: 10 GLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVNRVGLSGGLC 69
GLG+PW + + + +P + FL ET+ + A+ +++ + F CFVV G SGGL
Sbjct: 359 GLGNPWTLKTLCSHVKDHHPGMIFLFETRLNEAAMERIRVVMGFDSCFVVAAKGKSGGLA 418
Query: 70 LLWKDDIEVSIINYFIHHIDADIVWNDKH--GRFTGIYGQPSSDQRAQTWELISRLHNYY 129
LLWK+ EVSI ++ + HIDA IV N RFTG YG P R +W+L+ RL +
Sbjct: 419 LLWKEPYEVSIKSFTVSHIDA-IVENSLGFLWRFTGFYGSPDPGDRKFSWQLLERLRDMI 478
Query: 130 DSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRTYTWCNRREM 189
AW+ GGDFNEI+ EK GG + + + +FR L N ++R +TWCN R+
Sbjct: 479 HGAWICGGDFNEIVKASEKKGGSLKQESKMRDFRKALSYCNFKEIRSEGGDFTWCNGRQ- 538
Query: 190 GDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKLCLDVY-------------- 249
+ V +LDR LAN + F VT L W SDHRP+ +C ++
Sbjct: 539 NNLVFEKLDRILANLEWFRRFLSSTVTLLSWWNSDHRPLIICANIVRNMSNKEPRWRSRF 598
Query: 250 --------TKKGGNVLET-----------------------------EIARELALV-GDR 306
++ G ++E+ + +R L L GDR
Sbjct: 599 HYEQAWAEEEQCGKIVESVWLNSTNWGSPQGLRRRINHCGEEEILWKQRSRALWLAHGDR 658
BLAST of Lcy09g015190 vs. ExPASy TrEMBL
Match:
A0A5B6U9Z8 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_009669 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 4.0e-48
Identity = 110/309 (35.60%), Postives = 168/309 (54.37%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+ + W+VRGLG P R + ++L R+ PQ+ FL ETK +S + ++ + F V
Sbjct: 1 MKILSWNVRGLGQPRTVRRLKNKLRRIQPQILFLMETKVTSKRMESIRRKCGFLNGIDVA 60
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWNDK--HGRFTGIYGQPSSDQRAQTWE 120
G GGL L WK+ + + + ++ +HID ++ D+ RFTG Y P ++R ++W+
Sbjct: 61 ATGTRGGLSLGWKEGLNLMLKSFSNYHIDVEVEDEDEVDTWRFTGFYEVPVENERKESWK 120
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
L+ L D W+I GDFNEIL+ +EK GG TR + + FR TL+ L DL F +
Sbjct: 121 LLRALKRRNDKPWLITGDFNEILFSFEKKGGRTREERQMAAFRETLEHCELYDLGFSGQW 180
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKLCLDVYTKKGG 240
TW R + + + RLDR +AN + LF Y+V++L + S+H PI V G
Sbjct: 181 CTWERGRLVDNNIRERLDRGVANTEWWKLFPGYKVSHLQHSFSNHCPI-----VVDTCGM 240
Query: 241 NVLETEIAR---ELALVGDRNTKWFHQKASSRRKRNFINGVVDATGSWQTESSSIQETFE 300
L E R +GDRNT +FH+ A+ R+++N IN + + GS TE +I
Sbjct: 241 EELRGEEQRARVNWLRMGDRNTAFFHRSATHRKRKNLINELKNEAGSLVTEMDAIHNLAT 300
Query: 301 RYYVELFCS 305
Y+ E+F S
Sbjct: 301 EYFKEMFSS 304
BLAST of Lcy09g015190 vs. ExPASy TrEMBL
Match:
A0A803QCP7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 114/346 (32.95%), Postives = 171/346 (49.42%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M + W+V+GLG+PW ++ +S NP++ F+SE + + L+ +L FSGCFVV
Sbjct: 832 MSLLIWNVQGLGNPWTVHSLHFRVSSYNPEMVFISEWRLNKVHAETLRVKLGFSGCFVVE 891
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWND-KHGRFTGIYGQPSSDQRAQTWEL 120
G SGG+ L W D+E ++++ HID+ I + + RFTG YG P QR + +L
Sbjct: 892 ARGKSGGVSLFWSMDVETQVLSFSPFHIDSFIRMEEGQWWRFTGFYGDPDPTQRIHSCKL 951
Query: 121 ISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRTY 180
+ RL Y W +GGDFNEIL EK G ++ LI+NFR LD L D+ F Y
Sbjct: 952 LKRLSCMYLGTWAVGGDFNEILSQKEKMGDSSKSSYLINNFRKALDSCQLRDVGFECCDY 1011
Query: 181 TWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKLCLD-------- 240
TWCN R+ + + RLDR N + +F V +LD SDH P+ L
Sbjct: 1012 TWCNGRKQ-NLIFERLDRVCGNSDWFEMFSHAIVKHLDCINSDHCPLLLTEKDPSSRMYH 1071
Query: 241 --------------VYTKKGGNVLETEIARELALV-------------------GDRNTK 300
++ +++ E+ + +V GD+NTK
Sbjct: 1072 TARWKFRFHFESAWADDEEFTEIIQPELEHKQNIVLHKEEKFWKQRSRAIWLKEGDKNTK 1131
Query: 301 WFHQKASSRRKRNFINGVVDATGSWQTESSSIQETFERYYVELFCS 305
FH+KAS+R+ +N I G+VD +W T + + + Y+ LF S
Sbjct: 1132 LFHRKASNRKAKNTIKGLVDERLNWVTVNRHMGKVACDYFKNLFTS 1176
BLAST of Lcy09g015190 vs. ExPASy TrEMBL
Match:
A0A803QQ69 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 130/413 (31.48%), Postives = 183/413 (44.31%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M + W+V+GLG+PW + + + +P++ FLSET+ + A+ +++ L F GCFVV
Sbjct: 413 MSILIWNVQGLGNPWTLKALCSHVKDYHPEMIFLSETRLNDVAMERIRVVLGFDGCFVVA 472
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWNDK--HGRFTGIYGQPSSDQRAQTWE 120
G SGGL LLWK+ EV++ ++ + HIDA +V N RFTG YG P R +W
Sbjct: 473 AKGKSGGLALLWKEPFEVNVKSFTVSHIDA-MVENGLGFSWRFTGFYGSPDPGGRKDSWL 532
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
L+ RL + AWV GGDFNEI+ EK GG + + L+ +FR + N ++
Sbjct: 533 LLERLRDMLQGAWVCGGDFNEIIKAKEKKGGCVKNEALLRDFRRAISYCNFKEITMNGGE 592
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRP------------- 240
+TWCN R+ + V +LDR LANP++ F VT L W SDHRP
Sbjct: 593 FTWCNGRQ-DNLVFEKLDRVLANPTWFKYFCESSVTLLPWWSSDHRPMLLKFSLAMDRAN 652
Query: 241 --------------------------------------------IKLC------------ 300
I LC
Sbjct: 653 RMPTWRSRFHYEQAWGEEEECGRIVESVWFDNTNWGSPHGLRGRINLCGETLKDCNKDKK 712
Query: 301 --LDVYTKK-------------------------GGNVLET-------EIARELALV-GD 308
L TK+ NV ET + +R L L GD
Sbjct: 713 ADLRARTKRLKEELNNLSKSSRAADWKTRRRIEGELNVAETKDEIMWKQRSRALWLAHGD 772
BLAST of Lcy09g015190 vs. ExPASy TrEMBL
Match:
F4NCJ4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 127/407 (31.20%), Postives = 182/407 (44.72%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+ +CW+ +G+G+PW R + ++ P F+SETK + + + K L FSG F V+
Sbjct: 1 MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60
Query: 61 RVGLSGGLCLLWKDD-IEVSIINYFIHHIDADIVWN-DKHGRFTGIYGQPSSDQRAQTWE 120
VG +GGLC+ WK++ I ++++ +HI D+ N D RF GIYG P + + +TW
Sbjct: 61 CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVRWRFVGIYGWPEEENKHKTWA 120
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
LI L + Y+ V GGDFNEIL EK GG +R + I FR +DD +L DLRF+ +
Sbjct: 121 LIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQW 180
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKL---------- 240
+TW R ++ RLDRF+ + S+ LF + + SDH I L
Sbjct: 181 HTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPR 240
Query: 241 -----------------CLDVY-----TKKGGNVLET--EIAREL--------------- 300
C +V +GG + E +AREL
Sbjct: 241 RRAGGFWFETFWLLDDTCEEVVRGAWNAAEGGRICEKLGAVARELQGWSKKTFGSLRKKI 300
Query: 301 -------------------------------------------------ALVGDRNTKWF 308
GDRNT +F
Sbjct: 301 EAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYF 360
BLAST of Lcy09g015190 vs. NCBI nr
Match:
KAA3453657.1 (reverse transcriptase [Gossypium australe])
HSP 1 Score: 201.8 bits (512), Expect = 8.4e-48
Identity = 110/309 (35.60%), Postives = 168/309 (54.37%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+ + W+VRGLG P R + ++L R+ PQ+ FL ETK +S + ++ + F V
Sbjct: 1 MKILSWNVRGLGQPRTVRRLKNKLRRIQPQILFLMETKVTSKRMESIRRKCGFLNGIDVA 60
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWNDK--HGRFTGIYGQPSSDQRAQTWE 120
G GGL L WK+ + + + ++ +HID ++ D+ RFTG Y P ++R ++W+
Sbjct: 61 ATGTRGGLSLGWKEGLNLMLKSFSNYHIDVEVEDEDEVDTWRFTGFYEVPVENERKESWK 120
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
L+ L D W+I GDFNEIL+ +EK GG TR + + FR TL+ L DL F +
Sbjct: 121 LLRALKRRNDKPWLITGDFNEILFSFEKKGGRTREERQMAAFRETLEHCELYDLGFSGQW 180
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKLCLDVYTKKGG 240
TW R + + + RLDR +AN + LF Y+V++L + S+H PI V G
Sbjct: 181 CTWERGRLVDNNIRERLDRGVANTEWWKLFPGYKVSHLQHSFSNHCPI-----VVDTCGM 240
Query: 241 NVLETEIAR---ELALVGDRNTKWFHQKASSRRKRNFINGVVDATGSWQTESSSIQETFE 300
L E R +GDRNT +FH+ A+ R+++N IN + + GS TE +I
Sbjct: 241 EELRGEEQRARVNWLRMGDRNTAFFHRSATHRKRKNLINELKNEAGSLVTEMDAIHNLAT 300
Query: 301 RYYVELFCS 305
Y+ E+F S
Sbjct: 301 EYFKEMFSS 304
BLAST of Lcy09g015190 vs. NCBI nr
Match:
XP_024044510.1 (uncharacterized protein LOC112100177 [Citrus clementina])
HSP 1 Score: 200.7 bits (509), Expect = 1.9e-47
Identity = 105/281 (37.37%), Postives = 151/281 (53.74%), Query Frame = 0
Query: 29 PQLCFLSETKCSSPALNKLKNRLNFSGCFVVNRVGLSGGLCLLWKDDIEVSIINYFIHHI 88
P++ FL ETK + + RL + CF VNR GL GGL LLW +++ V I +Y HH+
Sbjct: 2 PEIMFLCETKLKVKQMQEKAKRLRYQNCFAVNREGLGGGLALLWNEEVTVDIKSYSKHHV 61
Query: 89 DADI-VWNDKHGRFTGIYGQPSSDQRAQTWELISRLHNYYDSAWVIGGDFNEILWDYEKS 148
DA + N + R TG+YG P S+++ TWEL+ RL W+ GDFNE+L EK
Sbjct: 62 DAVVHSENGSYWRCTGVYGHPESEKKKHTWELLRRLAQLSSLPWLCVGDFNEVLSLNEKI 121
Query: 149 GGPTRVQLLIHNFRATLDDYNLLDLRFLDRTYTWCNRREMGDQVSLRLDRFLANPSFTSL 208
GG + ++ FR L D +L DL +TW NRR + +LDRFL N + S
Sbjct: 122 GGKEKRVNEVNEFRRALRDCDLTDLGSCGYHFTWSNRRFGPHIIEEKLDRFLCNRKWGSF 181
Query: 209 FHRYQVTNLDWAKSDHRPIKLCLDVYTKKGGNVLETEIAR-ELALVGDRNTKWFHQKASS 268
+ +NL SDH PI + E++R + GDRNTK+FH KAS+
Sbjct: 182 YQEKAASNLTSWSSDHIPIMM---------------EVSRADWLKEGDRNTKYFHSKASA 241
Query: 269 RRKRNFINGVVDATGSWQTESSSIQETFERYYVELFCSTNP 308
RRK+N I G+ D G W ++ ++ F Y+ +F +++P
Sbjct: 242 RRKKNRIQGIEDENGVWTEDAEVVERLFGDYFTNIFTTSSP 267
BLAST of Lcy09g015190 vs. NCBI nr
Match:
CCA66050.1 (hypothetical protein [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 199.5 bits (506), Expect = 4.1e-47
Identity = 127/407 (31.20%), Postives = 182/407 (44.72%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+ +CW+ +G+G+PW R + ++ P F+SETK + + + K L FSG F V+
Sbjct: 1 MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60
Query: 61 RVGLSGGLCLLWKDD-IEVSIINYFIHHIDADIVWN-DKHGRFTGIYGQPSSDQRAQTWE 120
VG +GGLC+ WK++ I ++++ +HI D+ N D RF GIYG P + + +TW
Sbjct: 61 CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVRWRFVGIYGWPEEENKHKTWA 120
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
LI L + Y+ V GGDFNEIL EK GG +R + I FR +DD +L DLRF+ +
Sbjct: 121 LIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQW 180
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKL---------- 240
+TW R ++ RLDRF+ + S+ LF + + SDH I L
Sbjct: 181 HTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPR 240
Query: 241 -----------------CLDVY-----TKKGGNVLET--EIAREL--------------- 300
C +V +GG + E +AREL
Sbjct: 241 RRAGGFWFETFWLLDDTCEEVVRGAWNAAEGGRICEKLGAVARELQGWSKKTFGSLRKKI 300
Query: 301 -------------------------------------------------ALVGDRNTKWF 308
GDRNT +F
Sbjct: 301 EAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYF 360
BLAST of Lcy09g015190 vs. NCBI nr
Match:
KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])
HSP 1 Score: 198.0 bits (502), Expect = 1.2e-46
Identity = 100/227 (44.05%), Postives = 135/227 (59.47%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+ +CW+ RGLG+P R + D ++ +P L FL ETK + A+ K RL+ + CF V+
Sbjct: 1 MKLLCWNSRGLGNPQGIRVLRDLITNEDPSLVFLQETKLKARAMENCKFRLHLTHCFTVD 60
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWND-KHGRFTGIYGQPSSDQRAQTWEL 120
VG SGGL LLWK D+ V + ++ +HHIDA I D RFTG+YG P R TW L
Sbjct: 61 CVGRSGGLSLLWKGDLRVRVQSFSLHHIDALIQDGDGPEWRFTGVYGNPEVVNRYLTWNL 120
Query: 121 ISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRTY 180
+ RL++ D W++GGDFNE+L EK GG R + + FR + D +L DL F Y
Sbjct: 121 LRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFRGPKY 180
Query: 181 TWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPI 227
TWCN R +S RLDRFL N F +LF ++ V + A SDH P+
Sbjct: 181 TWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRHGMAAYSDHLPV 227
BLAST of Lcy09g015190 vs. NCBI nr
Match:
XP_042972796.1 (uncharacterized protein LOC122304603 [Carya illinoinensis])
HSP 1 Score: 198.0 bits (502), Expect = 1.2e-46
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0
Query: 1 MRTVCWDVRGLGSPWAFRNISDELSRLNPQLCFLSETKCSSPALNKLKNRLNFSGCFVVN 60
M+T+ W+ RGLG+P R + D + R P + FL ETK +S + +++ R+ F CFVVN
Sbjct: 1 MKTISWNSRGLGNPRGVRALCDLVRREVPAVLFLMETKLTSRQMERIRVRVGFECCFVVN 60
Query: 61 RVGLSGGLCLLWKDDIEVSIINYFIHHIDADIVWND--KHGRFTGIYGQPSSDQRAQTWE 120
G GG+ LLW+++I++SI ++ + HIDA I D +FTG+YG ++R +TW
Sbjct: 61 SDGRKGGVALLWRNEIKLSIKSFSLFHIDAKISGTDGGMEWKFTGLYGHLEIEKREETWS 120
Query: 121 LISRLHNYYDSAWVIGGDFNEILWDYEKSGGPTRVQLLIHNFRATLDDYNLLDLRFLDRT 180
L+ L + W++ GDFNE+L EK GG R ++L+ FR+ LDD NL+DL F +
Sbjct: 121 LLRALREEGNIPWLVCGDFNEVLSQQEKMGGRPRPEMLMQAFRSVLDDCNLIDLGFKGQK 180
Query: 181 YTWCNRREMGDQVSLRLDRFLANPSFTSLFHRYQVTNLDWAKSDHRPIKL 229
YTWCNRR VS RLDRF+A P++ + F +V + A SDH PI L
Sbjct: 181 YTWCNRRYEDGVVSERLDRFVATPNWKACFPLSRVVHGVAASSDHLPIIL 230
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PC18 | 3.1e-48 | 34.29 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5B6U9Z8 | 4.0e-48 | 35.60 | Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_009669 PE=4 SV=1 | [more] |
A0A803QCP7 | 2.0e-47 | 32.95 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QQ69 | 2.0e-47 | 31.48 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
F4NCJ4 | 2.0e-47 | 31.20 | Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris... | [more] |
Match Name | E-value | Identity | Description | |