Lcy09g014950 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g014950
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionExonuclease 1
LocationChr09: 19772705 .. 19778180 (-)
RNA-Seq ExpressionLcy09g014950
SyntenyLcy09g014950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCTGTCAGCCATTCGCAGATCGCCGTCCGGTGGTTTGTCGAGCATAATCGGTGGCTATCTCAACCGAGGAGGTGATTCGAGGCTGGATCGACGGGAGGCCAACGCTCTGAACGAAGAAGAAATATTTATAAGGGCGGAGCGAAGAATGAACCGTATTGAACTCTGAGAAATTACCCTCATGTAAGTTCCAGTGGGATTCTTCTCCAAGCTATGGAGCTTCATCTCCTTTCTTCTTCTTGCCTCTCGTCCTTGGCCTCTTCAAAGGTAATTTCACCGCCTCTTCTTCTCCATTCACCTGGTTTTGTAACAAAAGTTCTAAATCAACGAAACTAATTCGAGTAGCTTTCTTCAATTTTGAGGATACAATGTTTGATTTGTGGACATTTTCAGATGCAATCGTTGGCCCCATTGCAGTCGCCATTCTTGTGATTGGAAACTCCTCTATCATTGTTGGGTTTTTTCCCACACATTTTTTCTGGAGTTTCTTCTACCTGGCTAGATACGTTAATAAGATATCGTTGAAGTCTATTGACTGTTGTTTGTTCAAATATTTGTTGAAGTACTGTATGTTTTTTAGTGCATTGTTGTTTATAGGGGCGGAGCGAAGAAGAAATAAGAGTTAAATTGCCTACTCTTAGTTTGTTTAGATGCAAAAAGTTGTTTAAATGAGTTTAAGAGTTTGAAGTTTTCCCTCTTTAAAAAAATTGGTGGTTTTTTTCCTAGTTGGTTTCTGGATTTGATTGGAGCAGTGTTATTAAAATCGTACGATACAACTTGAAACGGGAGGAAAACGATTCAAACCGTGGTTTTGAATCGGAAATTTCATGTCTCGAACGATTCACGTTTCTGAATCGTAAGAATCGTGCTTGAATCGAAACGTTTCGATTCAAAAATCAATAAACCTAAAAAAAAAATTGCAAAATACCTACGATTTTGAGTTTAAAATTACTTGCCAGCACCGGATAAGTTCGCCAGCATGCGTGGAGAGGTGGAGAAGAAACCCTCATCGTGAAGAAGTTCGTACTTGAAGAAGATGAAGAAAGGTTGTGGGTTGTGTTGGGTTTTGTTTGATTGAAGAAGATGAATGAGAGGGAGAGTGAAAAGCTGGAGAGTTGGTCTGTGAATATTGAAGAAGACGAAGAGATAAGAGAGAGACTGAGAGAGTTAAAAGAAATTAGGAAAAAAGTTGAAGGAAATTTATTGGGAAGAAGGAGAAATTAAATAAAAAATACACTGCCCTCCCATTTTCTTTCTTTTTTTCCGATGCCTATTGTTAATTCTCCTTCCAAGAAATTAAATAGACTCAGCAAAGTGTCATGCAAACTGCCTCATACTAATATTCACCCTCATATTTGTGCCCTTTCATTTTCTTTCTTTTTTTTCAAATGGCTATTCTCCTTCTCCCTGCACAAGGGAAGCCCCTATTTTTAATTTATATTTAAATATTATTTTTCAAATTAAATCTTACGATACACGATACGTTACGATACACGATACACTAAACTTTGATTTCGATACGTATTCCGTTTCACGAGTTAACAACCTTGGATTGGAGGACTATGCTTCTATGATGATATTGTTTGATGGTTGTGTTTGGAAGACATTTTCATTTTTTGTTCAACCTGAACTGTTTCCTTGGAGTACTTCTCACTTGATTCTTAATTTGTATACTCTTCCATGGATTTATTCAAGAGAGTGTGCTAGAATGATGCTAAGGCATTAGGCTGACTATTTTATCTCCTACAATCTTTTAGTTCGACTTCCTATTCCACTGTCCTGATAATTGTTTAAAATGCTCGCTAAAGAAACTGTGCTGCTTTATTTCTGGATTGTTTTTAACATCTAGTTGTTCTTACTTGGTTCATGAAGCATCAACTCACTTGTTGTTTCATGAAAAATTCTTATTTAAATTTTGTCGGGATCAATGGTGTTGGTTATTTCCCTACATTTTTTTTAATTGGCAACCATTTTTTATATTTTCAAAGTTGAGTTTATTCTAAACAATAAAACATCATTATTTGAAGAGGATCTTGGTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTGAAAACCTATTATTATTTCAACGAGTTACAATTCTTCTTATCTCTAGTTTCCACAATTTATTTATAACATATGGTTTCCATGCTTTTAAAGTAATGCCTCATGTAAAGAATCTCACTTTTCACCACAGGACAAGAAAAGAAAATTTCGCACGTGTAAGAGAACATGAAACGAATGGCAATTCTGTTGCTGCCTACGAGTGCTACCAGAAGGCCGTTGATATAACACCTTTGATCGCCCATGAACTAATTCAAGTAACAACTTTTTCATATTTGTTATGTTACTATTGTTAGAGGGTTGTGTGAATTATATTTTTCAGTGCTCAAGGATATTACTTTAAACTTGACATGAGTTCATTTTGAAGATGTTAAAGCGAGAGAATATATCATATGTTGTGGCACCTTATGAGGCAGATGCTAAAAATGACCTTCTTGGTTATCAGCAATTAGGTTGATGTCATTCTTACTGAGGACTCTGATCTAATACTGTTTAGTTGTCCAAGGGTAACCTATATAGAAAAACATTCTTGGACTCTTTTCATTTGTCAATCCACTTTGATATTCTTAGATGTAAACTGCTTCTACTCTATACTTCATGGAGAATTCTTAATGATTTTTGTTGCTTTGCTCCTGTACAAATAAGATTATCTTTAAAATGGACAAATTTGGACAAGGAGTTTGAGTTTCTATATGAAAACAATTCATAAATCAGGGGAGTCTGTATTTTAAATGTTATTCAGTTAATAAGAGCAATAGCTTTGATGAAATTAGTTAGTTAATCAATAATAGGTGTCCTGTTTTTGGCATTTTTATCCATATGACATTCAGATGCCAGACAAATTTAAAGCAAATTGTAATTATCTAGTTAAATGGATTCACTTGTCCAAACAACTTACAATGTGGTCTATGATATAAATAGTGCAACGAAAATAGTCAAGTAGGAATGGAAATAATGTTCTTGCTTTAAGTGAGAGTTATATCTTCTGAATCCAATATTATGTAGCTTAAAAGCCCCACCTTCCTCTTATGGGGATGAGGTTGTTAGAGTTGGGGGACAATGATGAATAAGATTCGTTTCTTAAGTTTGTTATGTTGTAATACTTATAGTTCTCTGATTTCTTTACATGAACATGAGCAGAATATCAATTATGGAGTCGTGCATGAAAGGTACATACTTTCAGTTTTCATTTTTTATGTTTCTTTTGGGGTGAAATAATTGGATGTTTTATTTTTCATGAAATGTTTCATGAAATGGATCCTGAAAATGTAGGTACACCGGAAAGAATGGAGTTTCTCTAAGTAGCTTTAAAAACTAAAGTTAGTTATTGGTGTTCATATATGCTATATTGTACTCAATATATCATGGCATACTTTTAGGATATCCAAAAAGGGTTGGATTTGGGTGTAGTATCACTAGAGGTGTTAAAGAGAACTTCTTTGATTTGGAGCAATATCCTCTGATTTCAAAACTTACGCATCGTTTCCAGGTTCAGTTGCTTTATGGAAATGACTTTTCATTTCGTTGTACTCATCTGAACATCTTGCTAAAGCCCACCTTCTCAATTATTAGAGTTGTTGTGAGATATTATATATATATATATATATATATATTTAGTTTGTGTATATACTTTTGTGAGATATTTATATATATATTCTTTTGAGTTCTCCTACATAGCTCCTAAAGGGAATATTTGGCTCATATAATTGATGAATTCCATTTGGTTAGTTAGTGTTCTGGTAGGCATGTTTGAAGTACTGAATTTGCTGGGTTTTTTGGCTTTTGTTTGTTTAGTTGTTATGTAGTTTTAACCACTAATGATAAAACATCTTTTAGTTTTAACCTCTAATGATAAAACAAATAGCGAACTCTTTTTTAGGTTGTAAGTTCAATCAAGTGGCTTGAGGATGAGTTGGATCTCAATACTCTCAACAATTCAGGTAGCCGGTGAGGGAATGGTAATGAGAAAGTTGCTATAGCCCAAAGAACTACTACTCTATATCCTTCTTGAATGAAGGGTGTAAGTGTTCCACTTAGGATTGTTTATGTAAATGTTTTCATGGAAGTTTAAAAGTAGTTATGTGGCTTCTCTTCTTCTCCCTCACCAATCTCTTTTCTTATTTCCTGACTTATTTATTTAGGTAAAAGATGTTGCATTCACAGGGCTTTTCAGATTAATGTTCAAGCCATTTGGTTGATGAGTTTCCTTGTTTTGGAGCTGTGTGTTATTCTCTGAGGAAAAAGGTAAATTGTCATCTCTAAAACAGTTGGACAAGGAGATCAAGAAAATTATATACTTCTTATATATAGTGCATTCAAGCTAATGCATCATAATTATTCATGTTTCTGCGGGCAGAAAAATCTTGATTTTAAACTTAAGATTATTGGAGGAGACACATCATCTATTCTTGTGATTTTTTATGCTATTGAGGTAAATTTGGAACTTCAACAATACTCCTGTATGCTTTAAATTTGGAACTTCATAATTAGTGTTAAAGTTGAATTGTAGTGTGCTTTAGATAAAGTTGAAGTGTTAAAGGTCATTGTTATTAGGGTTCATGTTTACCTAGTGCTAAGACAAATTTAATAGCATGAAATCCTTGTTGTTTCCTTGAAATTAGTAGCGGGTGGATGTTTTTAGCAGGGTGAAACACAGTTTTAAGTTTTTCTCACCAAGTATAAAGGAGCTATACCTTTTTTTTTATAATTATAAAAGAAAATGGATGTTTTTATTAAATAAAAGTTATGTTTTTCTGTGATTTGCTAGAAGTTATGGTTAAAAAAATTTCTCTATTTACATTACATGATATGGTTGCATTAGTCTCTCACTTGTCAAGCCTAAATGTTGCTTATGATGTTTTAATCTTTCTTTTTCTTTATGTTATAATTGTCGTGGCTTGGTAGGCAGGAAAGCCACTAGTAATTGAAGAAGTGGCCTGAAGTGGCACCACCTCAAGCGAATGATGTTCGTGTGAAGGTCCTCTTTACTACTCTTTGCCACACTGATGTTTACTTCTGAGAAGCCAAGGTAATGTAGTTTTACCATTTTTTAGTAACCACATTTTTATTTTACACAATTTGGAACGTGTTTTGCTATATATGCTTTCTTGTTTGGACTTTATGGGTCTTCTCAAAATTTCTTTTGGTAGTTATTTTGTCTAAATAAACATTTAGGATGATAACTAGTAACAAGTGAAAGAGTTCCAATTTAAAAAATACTTGGAACTCATACGGATGTTGTTTAGAGACATTTCATATCTTCTGATTTTTCCTTTTCTTTTGTGGAGGATGATCCATAGCCAAATATGGATCTCCTATTCTCGTTATCGAACTGCCAAAGGCACTGCACGGATCGTCGACAAGGGCGTCGAATTCGAACAAGTTGATAGAGAATGA

mRNA sequence

ATGGTTGCTGTCAGCCATTCGCAGATCGCCGTCCGGTGGTTTGTCGAGCATAATCGGTGGCTATCTCAACCGAGGAGGACAAGAAAAGAAAATTTCGCACGTGTAAGAGAACATGAAACGAATGGCAATTCTGTTGCTGCCTACGAGTGCTACCAGAAGGCCGTTGATATAACACCTTTGATCGCCCATGAACTAATTCAAGTTGTAAGTTCAATCAAGTGGCTTGAGGATGAGTTGGATCTCAATACTCTCAACAATTCAGGTAGCCGGATGATCCATAGCCAAATATGGATCTCCTATTCTCGTTATCGAACTGCCAAAGGCACTGCACGGATCGTCGACAAGGGCGTCGAATTCGAACAAGTTGATAGAGAATGA

Coding sequence (CDS)

ATGGTTGCTGTCAGCCATTCGCAGATCGCCGTCCGGTGGTTTGTCGAGCATAATCGGTGGCTATCTCAACCGAGGAGGACAAGAAAAGAAAATTTCGCACGTGTAAGAGAACATGAAACGAATGGCAATTCTGTTGCTGCCTACGAGTGCTACCAGAAGGCCGTTGATATAACACCTTTGATCGCCCATGAACTAATTCAAGTTGTAAGTTCAATCAAGTGGCTTGAGGATGAGTTGGATCTCAATACTCTCAACAATTCAGGTAGCCGGATGATCCATAGCCAAATATGGATCTCCTATTCTCGTTATCGAACTGCCAAAGGCACTGCACGGATCGTCGACAAGGGCGTCGAATTCGAACAAGTTGATAGAGAATGA

Protein sequence

MVAVSHSQIAVRWFVEHNRWLSQPRRTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVVSSIKWLEDELDLNTLNNSGSRMIHSQIWISYSRYRTAKGTARIVDKGVEFEQVDRE
Homology
[Close]
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match: Q8L6Z7 (Exonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=EXO1 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 9.1e-12
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           R+RKEN AR  EHE NGNS AAYECY KAVDI+P IAHELIQV+
Sbjct: 94  RSRKENLARALEHEANGNSSAAYECYSKAVDISPSIAHELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match: Q60GC1 (Exonuclease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXO1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVVSSIK 74
           R+RKEN  R +EHE+ GNS AA+ECYQKAVDITP IA ELIQV+   K
Sbjct: 94  RSRKENLERAKEHESAGNSRAAFECYQKAVDITPRIAFELIQVLKQEK 141

[Close]
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match: F4HVX7 (Protein CER1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At1g02190 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-09
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 57  ITPLIAHELIQVVSSIKWLEDELDLNTLNNSGSRMIHSQIWISYSRYRTAKGTARIVDKG 116
           + PL+   +   V+++   +D   L  +     R++HSQIWIS SR RTAKGT +IVDK 
Sbjct: 24  VAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVHSQIWISVSRQRTAKGTNKIVDKP 83

Query: 117 VEFEQVDRE 126
           +EFEQVDRE
Sbjct: 84  IEFEQVDRE 92

[Close]
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match: B8AFI3 (Very-long-chain aldehyde decarbonylase GL1-4 OS=Oryza sativa subsp. indica OX=39946 GN=GL1-4 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-09
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 53  KAVDITPLIAHELIQVVSSIKWLEDELDLN-TLNNSGSRMIHSQIWISYSRYRTAKGTAR 112
           K V + P++AH   +V+ +  W + ++  +  L +   RMIH+QIWIS SRY+TA+   R
Sbjct: 20  KYVVMAPVVAHGARRVMRN-GWGDLDIAFSLILPSLLLRMIHNQIWISLSRYQTARSKHR 79

Query: 113 IVDKGVEFEQVDRE 126
           IVD+G+EF+QVDRE
Sbjct: 80  IVDRGIEFDQVDRE 92

[Close]
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match: Q6K9F6 (Very-long-chain aldehyde decarbonylase GL1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=GL1-4 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-09
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 53  KAVDITPLIAHELIQVVSSIKWLEDELDLN-TLNNSGSRMIHSQIWISYSRYRTAKGTAR 112
           K V + P++AH   +V+ +  W + ++  +  L +   RMIH+QIWIS SRY+TA+   R
Sbjct: 20  KYVVMAPVVAHGARRVMRN-GWGDLDIAFSLILPSLLLRMIHNQIWISLSRYQTARSKHR 79

Query: 113 IVDKGVEFEQVDRE 126
           IVD+G+EF+QVDRE
Sbjct: 80  IVDRGIEFDQVDRE 92

[Close]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match: A0A6J1K615 (Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match: A0A6J1GRS7 (Exonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111456917 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match: A0A6J1K3T0 (Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match: A0A6J1K294 (Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match: A0A6J1GRT3 (Exonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111456917 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. NCBI nr
Match: XP_022954763.1 (exonuclease 1 isoform X3 [Cucurbita moschata])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. NCBI nr
Match: XP_022994762.1 (exonuclease 1 isoform X1 [Cucurbita maxima] >XP_022994763.1 exonuclease 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. NCBI nr
Match: XP_022954760.1 (exonuclease 1 isoform X1 [Cucurbita moschata] >XP_022954761.1 exonuclease 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. NCBI nr
Match: XP_022994764.1 (exonuclease 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. NCBI nr
Match: XP_022994765.1 (exonuclease 1 isoform X3 [Cucurbita maxima])

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           RTRKEN AR  EHETNGNS AAYECYQKAVDITP+IA+ELIQV+
Sbjct: 94  RTRKENLARAMEHETNGNSAAAYECYQKAVDITPMIAYELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. TAIR 10
Match: AT1G29630.1 (5'-3' exonuclease family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           R+RKEN AR  EHE NGNS AAYECY KAVDI+P IAHELIQV+
Sbjct: 94  RSRKENLARALEHEANGNSSAAYECYSKAVDISPSIAHELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. TAIR 10
Match: AT1G29630.2 (5'-3' exonuclease family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 26  RTRKENFARVREHETNGNSVAAYECYQKAVDITPLIAHELIQVV 70
           R+RKEN AR  EHE NGNS AAYECY KAVDI+P IAHELIQV+
Sbjct: 94  RSRKENLARALEHEANGNSSAAYECYSKAVDISPSIAHELIQVL 137

[Close]
BLAST of Lcy09g014950 vs. TAIR 10
Match: AT1G02190.2 (Fatty acid hydroxylase superfamily )

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 57  ITPLIAHELIQVVSSIKWLEDELDLNTLNNSGSRMIHSQIWISYSRYRTAKGTARIVDKG 116
           + PL+   +   V+++   +D   L  +     R++HSQIWIS SR RTAKGT +IVDK 
Sbjct: 24  VAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVHSQIWISVSRQRTAKGTNKIVDKP 83

Query: 117 VEFEQVDRE 126
           +EFEQVDRE
Sbjct: 84  IEFEQVDRE 92

[Close]
BLAST of Lcy09g014950 vs. TAIR 10
Match: AT1G02190.1 (Fatty acid hydroxylase superfamily )

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 57  ITPLIAHELIQVVSSIKWLEDELDLNTLNNSGSRMIHSQIWISYSRYRTAKGTARIVDKG 116
           + PL+   +   V+++   +D   L  +     R++HSQIWIS SR RTAKGT +IVDK 
Sbjct: 24  VAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVHSQIWISVSRQRTAKGTNKIVDKP 83

Query: 117 VEFEQVDRE 126
           +EFEQVDRE
Sbjct: 84  IEFEQVDRE 92

[Close]
BLAST of Lcy09g014950 vs. TAIR 10
Match: AT2G37700.1 (Fatty acid hydroxylase superfamily )

HSP 1 Score: 60.8 bits (146), Expect = 8.7e-10
Identity = 26/36 (72.22%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 90  RMIHSQIWISYSRYRTAKGTARIVDKGVEFEQVDRE 126
           R++HSQIWIS SRY+TAKGT RI++K +EF+QVDRE
Sbjct: 53  RIVHSQIWISLSRYQTAKGTKRILNKSIEFDQVDRE 88

The following BLAST results are available for this feature:
BLAST of Lcy09g014950 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L6Z79.1e-1277.27Exonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=EXO1 PE=2 SV=2[more]
Q60GC11.7e-1068.75Exonuclease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXO1 PE=2 SV=1[more]
F4HVX75.5e-0947.83Protein CER1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At1g02190 PE=2 SV=1[more]
B8AFI39.4e-0945.95Very-long-chain aldehyde decarbonylase GL1-4 OS=Oryza sativa subsp. indica OX=39... [more]
Q6K9F69.4e-0945.95Very-long-chain aldehyde decarbonylase GL1-4 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of Lcy09g014950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K6152.1e-1184.09Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1[more]
A0A6J1GRS72.1e-1184.09Exonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111456917 PE=3 SV=1[more]
A0A6J1K3T02.1e-1184.09Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1[more]
A0A6J1K2942.1e-1184.09Exonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111490394 PE=3 SV=1[more]
A0A6J1GRT32.1e-1184.09Exonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111456917 PE=3 SV=1[more]
BLAST of Lcy09g014950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954763.14.3e-1184.09exonuclease 1 isoform X3 [Cucurbita moschata][more]
XP_022994762.14.3e-1184.09exonuclease 1 isoform X1 [Cucurbita maxima] >XP_022994763.1 exonuclease 1 isofor... [more]
XP_022954760.14.3e-1184.09exonuclease 1 isoform X1 [Cucurbita moschata] >XP_022954761.1 exonuclease 1 isof... [more]
XP_022994764.14.3e-1184.09exonuclease 1 isoform X2 [Cucurbita maxima][more]
XP_022994765.14.3e-1184.09exonuclease 1 isoform X3 [Cucurbita maxima][more]
BLAST of Lcy09g014950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G29630.16.5e-1377.275'-3' exonuclease family protein [more]
AT1G29630.26.5e-1377.275'-3' exonuclease family protein [more]
AT1G02190.23.9e-1047.83Fatty acid hydroxylase superfamily [more]
AT1G02190.13.9e-1047.83Fatty acid hydroxylase superfamily [more]
AT2G37700.18.7e-1072.22Fatty acid hydroxylase superfamily [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11863STEROL DESATURASEcoord: 57..125
NoneNo IPR availablePANTHERPTHR11863:SF178CER1 PROTEINcoord: 57..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g014950.1Lcy09g014950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005634 nucleus
molecular_function GO:0035312 5'-3' exodeoxyribonuclease activity
molecular_function GO:0017108 5'-flap endonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding