Lcy09g014240 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g014240
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDDE Tnp4 domain-containing protein
LocationChr09: 16418142 .. 16418781 (+)
RNA-Seq ExpressionLcy09g014240
SyntenyLcy09g014240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTAACATGTATAATGTTTGGATGGGTATATATGCAATTCATCTATGCTTTATGTACATTCTCAAGGATTCAATTGATGTATTTAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG

mRNA sequence

ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG

Coding sequence (CDS)

ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG

Protein sequence

MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYHLNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITACCLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWRGIRH
Homology
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A5B7B0E0 (DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031750 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.4e-74
Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           MQFIYVLPGWEGSA+D RVLRDAVSRRNGL++P G YYL DAGYTNGEGFLAPYRGQRYH
Sbjct: 1   MQFIYVLPGWEGSAADGRVLRDAVSRRNGLRVPHGYYYLVDAGYTNGEGFLAPYRGQRYH 60

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDW +G+QP TP EFFNMKHS+ARNVIER FGLLK+RWAILR  S+YPV  Q R+I AC
Sbjct: 61  LNDWREGHQPTTPEEFFNMKHSAARNVIERCFGLLKLRWAILRSPSFYPVNTQNRIIMAC 120

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IRREMPVDPLEE++ +T  +T ++  D IT VE+S  W+ +R NLA+EMF EWR
Sbjct: 121 CLLHNFIRREMPVDPLEEQL-ETQEATNEVHGDPITTVETSDAWSAFRANLAVEMFNEWR 180

Query: 181 GIR 184
             R
Sbjct: 181 ASR 182

BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2N9HMW2 (DDE Tnp4 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40922 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.4e-74
Identity = 130/184 (70.65%), Postives = 153/184 (83.15%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           ++FIYVL GWEGSA+DSR+LR+AV R NGLK+PKG YYLCDAGYTNGEGFLAPYR +RYH
Sbjct: 152 LKFIYVLTGWEGSAADSRILRNAVFRTNGLKVPKGFYYLCDAGYTNGEGFLAPYRAERYH 211

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LN+W +G+QP TP EFFNMKH  ARNVIER FGLLK RWAILR KS+YPVK+QCR+ITAC
Sbjct: 212 LNEWTEGHQPNTPREFFNMKHCLARNVIERCFGLLKGRWAILRTKSFYPVKIQCRIITAC 271

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IRREMP+DPLE E+ +  S    +D D I +VE+S  W+ WRD+LA EMF +WR
Sbjct: 272 CLLHNHIRREMPIDPLENELSEVTSGQ-GLDGDVIRYVETSDIWSTWRDDLAKEMFNKWR 331

Query: 181 GIRH 185
           G RH
Sbjct: 332 GARH 334

BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2N9FLC7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15416 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.8e-74
Identity = 130/184 (70.65%), Postives = 152/184 (82.61%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           M+FIYVL GWEGSA+DSRVLR+ V R NGL++PKG YYLCDAGYTNGEGFLAPYR +RYH
Sbjct: 563 MKFIYVLTGWEGSAADSRVLRNVVFRTNGLRVPKGFYYLCDAGYTNGEGFLAPYRAERYH 622

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LN+W +G+QP TP EFFNMKH  ARNVIER FGLLK RWAILR KS+YPVK+QCR+ITAC
Sbjct: 623 LNEWTEGHQPNTPREFFNMKHCLARNVIERCFGLLKGRWAILRTKSFYPVKIQCRIITAC 682

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IRREMP+DPLE E+ +  S    +D D I +VE+S  W+ WRD+LA EMF +WR
Sbjct: 683 CLLHNHIRREMPIDPLENELSEVTSGQ-GLDGDVIRYVETSDIWSTWRDDLAKEMFNKWR 742

Query: 181 GIRH 185
           G RH
Sbjct: 743 GARH 745

BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A5B7B2I9 (DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031749 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 132/183 (72.13%), Postives = 152/183 (83.06%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           MQFIYVLPGWEGSA+D RVLRDAVSRRNGL++P G YYL DAGYTNGEGFLAPYRGQRYH
Sbjct: 220 MQFIYVLPGWEGSAADGRVLRDAVSRRNGLRVPHGYYYLVDAGYTNGEGFLAPYRGQRYH 279

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDW +G+QP TP EFFNMKHS+ARNVIER FGLLK+RWAILR  S+YPV  Q R+I AC
Sbjct: 280 LNDWKEGHQPTTPEEFFNMKHSAARNVIERCFGLLKLRWAILRSPSFYPVNTQNRIIMAC 339

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IRREMPVDP EE++ +T  +T ++  D IT VE+S  W+ +R NLA+EMF EWR
Sbjct: 340 CLLHNFIRREMPVDPSEEQL-ETQEATNEVHGDPITTVETSDAWSAFRANLAVEMFNEWR 399

Query: 181 GIR 184
             R
Sbjct: 400 ASR 401

BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2K3LNH7 (DDE Tnp4 domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g036086 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.0e-72
Identity = 129/184 (70.11%), Postives = 147/184 (79.89%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           +QFIYVLPGWEGSA+DSRVLRDA+SR NGLK+P+G YYLCDAGY NGEGFL PYRGQRYH
Sbjct: 39  LQFIYVLPGWEGSAADSRVLRDAISRPNGLKVPQGYYYLCDAGYMNGEGFLTPYRGQRYH 98

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           L++W  G QP TP EFFNMKHSSARNVIER FGLLK RWAILR KS+YPVK Q R+ITAC
Sbjct: 99  LSEWRNGLQPSTPKEFFNMKHSSARNVIERCFGLLKGRWAILREKSFYPVKTQGRIITAC 158

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IR+EM +DPLE  +G    S   +  D IT VE S+ W+ WRDN A+E+F  WR
Sbjct: 159 CLLHNHIRKEMVLDPLERNLGYDEVSDEVMSGDMITTVEPSTAWSQWRDNFALEIFNRWR 218

Query: 181 GIRH 185
           G  H
Sbjct: 219 GGNH 222

BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_038904441.1 (protein ALP1-like [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           +QFIYVLPGWEGSASDSRVLRDA+SRRNGLKIPKGCYYLCDA YTNGEGFLAPYRGQRYH
Sbjct: 97  IQFIYVLPGWEGSASDSRVLRDAISRRNGLKIPKGCYYLCDASYTNGEGFLAPYRGQRYH 156

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDWMQGYQPRT AEFFNMKHSSARNVIERAFGLLK RWAILRGKSYYPVKV+ R+ITA 
Sbjct: 157 LNDWMQGYQPRTLAEFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPVKVR-RIITAY 216

Query: 121 CLIHNLIRREMPVDPLEE-EVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEW 180
           CLIHNLIRREM VDPLEE EVGDTHSSTFD+DSDRITHVESS+EWTNWRDNLAIEMFEEW
Sbjct: 217 CLIHNLIRREMLVDPLEEDEVGDTHSSTFDMDSDRITHVESSNEWTNWRDNLAIEMFEEW 276

Query: 181 RGIRH 185
             IR+
Sbjct: 277 SDIRY 280

BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_040362734.1 (protein ALP1-like isoform X1 [Rosa chinensis])

HSP 1 Score: 288.1 bits (736), Expect = 5.3e-74
Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           MQFIYVLPGWEGSA+DSRVLRDA+SRR+G ++P G YYL DAGY NGEGFLAPYRGQRYH
Sbjct: 215 MQFIYVLPGWEGSAADSRVLRDAISRRHGFRVPHGYYYLVDAGYPNGEGFLAPYRGQRYH 274

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDW QGYQP TP EFFNMKHSSARNVIER FGLLK+RWAILR  S++PVK QCR++ AC
Sbjct: 275 LNDWRQGYQPTTPEEFFNMKHSSARNVIERCFGLLKMRWAILRSPSFFPVKTQCRIVIAC 334

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HNLIRREM +DPLE ++     +  D D D I  ++SS +W +WR  LA +MF EWR
Sbjct: 335 CLLHNLIRREMAIDPLENQLNAIMDNEDDDDDDIINFIDSSEQWNDWRRELATQMFNEWR 394

Query: 181 GIRH 185
           G R+
Sbjct: 395 GNRN 398

BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_040362735.1 (protein ALP1-like isoform X2 [Rosa chinensis])

HSP 1 Score: 288.1 bits (736), Expect = 5.3e-74
Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           MQFIYVLPGWEGSA+DSRVLRDA+SRR+G ++P G YYL DAGY NGEGFLAPYRGQRYH
Sbjct: 152 MQFIYVLPGWEGSAADSRVLRDAISRRHGFRVPHGYYYLVDAGYPNGEGFLAPYRGQRYH 211

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDW QGYQP TP EFFNMKHSSARNVIER FGLLK+RWAILR  S++PVK QCR++ AC
Sbjct: 212 LNDWRQGYQPTTPEEFFNMKHSSARNVIERCFGLLKMRWAILRSPSFFPVKTQCRIVIAC 271

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HNLIRREM +DPLE ++     +  D D D I  ++SS +W +WR  LA +MF EWR
Sbjct: 272 CLLHNLIRREMAIDPLENQLNAIMDNEDDDDDDIINFIDSSEQWNDWRRELATQMFNEWR 331

Query: 181 GIRH 185
           G R+
Sbjct: 332 GNRN 335

BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_023911371.1 (protein ALP1-like [Quercus suber])

HSP 1 Score: 287.0 bits (733), Expect = 1.2e-73
Identity = 131/183 (71.58%), Postives = 149/183 (81.42%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           MQFIYVLPGWEG A+D RVLR+A+SRRNGL++P G YYL DAGYTNGEGFLAPYRGQRYH
Sbjct: 1   MQFIYVLPGWEGFAADGRVLRNAISRRNGLRVPHGYYYLVDAGYTNGEGFLAPYRGQRYH 60

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LNDW  G QPRTP EFFNMKHSSARNVIER FGLLKIRWAILR  S++P+K Q R+I AC
Sbjct: 61  LNDWRDGQQPRTPEEFFNMKHSSARNVIERCFGLLKIRWAILRSPSFFPIKTQNRIIMAC 120

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           CL+HN IRR MPVDP+EEE+ +       I+ D ITH+E+S+EW+ WR NLA EMF  WR
Sbjct: 121 CLLHNFIRRVMPVDPVEEELDNDEQLAEGINGDPITHIETSNEWSAWRTNLANEMFNSWR 180

Query: 181 GIR 184
             R
Sbjct: 181 NRR 183

BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_031101555.1 (protein ALP1-like [Ipomoea triloba] >XP_031101556.1 protein ALP1-like [Ipomoea triloba])

HSP 1 Score: 283.1 bits (723), Expect = 1.7e-72
Identity = 126/184 (68.48%), Postives = 146/184 (79.35%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           M FIYVLPGWEGSA+D RVLRDA+SR+NGLK+P+G YYLCDAGYTNG+GFLAPYRGQRYH
Sbjct: 114 MHFIYVLPGWEGSAADGRVLRDAISRKNGLKVPQGNYYLCDAGYTNGDGFLAPYRGQRYH 173

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
           LN+W QGYQP T  E+FNMKHS ARN IER FG+LK RW ILR KS+YPVK QCR+I+AC
Sbjct: 174 LNEWRQGYQPATAKEYFNMKHSQARNCIERCFGILKARWCILRDKSFYPVKTQCRIISAC 233

Query: 121 CLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWR 180
           C++HN IR EM +DP+E EV  T     D + + ITH E+SS WT WRD LA EMF  W 
Sbjct: 234 CILHNFIRSEMSIDPIEIEVPQTELDN-DYEEELITHCETSSAWTEWRDKLADEMFTNWP 293

Query: 181 GIRH 185
            + H
Sbjct: 294 SLHH 296

BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-30
Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 0

Query: 3   FIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYHLN 62
           FIYVL GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 63  DWM-QGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITACC 122
           ++  Q   P TP E FN++H S RNVIER FG+ K R+AI +    +  K Q  ++  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 123 LIHNLIRREMPVDPLE--EEVGD---------THSSTFDIDSDRITHVESSS-EWTN-WR 179
            +HN +R+E   D  +  +EVG+            +T +ID++     +    E TN WR
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWR 204

BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-26
Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYH 60
           ++F YVL GWEGSASD +VL  A++RRN L++P+G YY+ D  Y N  GF+APY G   +
Sbjct: 183 LRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGVSTN 242

Query: 61  LNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITAC 120
             +           E FN +H      I R FG LK R+ IL     YP++ Q +++ A 
Sbjct: 243 SRE--------EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAA 302

Query: 121 CLIHNLIRREMPVD 135
           C +HN +R E P D
Sbjct: 303 CALHNYVRLEKPDD 308

BLAST of Lcy09g014240 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKG-CYYLCDAGYTNGEGFLAPYRGQ-- 60
           M F Y+  G  GS  D+ VL+ A    +   +P    YYL D+GY N +G LAPYR    
Sbjct: 216 MLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRN 275

Query: 61  ---RYHLNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLK 97
              RYH++ +  G +PR   E FN  H+S R+VIER F + K
Sbjct: 276 RVVRYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTFRIWK 317

BLAST of Lcy09g014240 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0

Query: 37  YYLCDAGYTNGEGFLAPYRGQRYHLNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLK 96
           YYL ++ Y    G+L P+R   YHL  + +G  P T  E FN KH   R+VI+R FG+ K
Sbjct: 95  YYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWK 154

Query: 97  IRWAIL 103
            +W IL
Sbjct: 155 AKWRIL 160

BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-07
Identity = 27/64 (42.19%), Postives = 33/64 (51.56%), Query Frame = 0

Query: 1   MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGC-YYLCDAGYTNGEGFLAPYRGQRY 60
           M F Y   G  GS  D+RVL  A+S      +P    YYL D+GY N  G+LAPYR +  
Sbjct: 150 MLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRREHR 209

Query: 61  HLND 64
              D
Sbjct: 210 EAQD 213

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5B7B0E03.4e-7472.68DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031750... [more]
A0A2N9HMW24.4e-7470.65DDE Tnp4 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40922... [more]
A0A2N9FLC79.8e-7470.65Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15416 PE=3 SV=1[more]
A0A5B7B2I91.7e-7372.13DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031749... [more]
A0A2K3LNH77.0e-7270.11DDE Tnp4 domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=... [more]
Match NameE-valueIdentityDescription
XP_038904441.16.7e-9391.35protein ALP1-like [Benincasa hispida][more]
XP_040362734.15.3e-7470.11protein ALP1-like isoform X1 [Rosa chinensis][more]
XP_040362735.15.3e-7470.11protein ALP1-like isoform X2 [Rosa chinensis][more]
XP_023911371.11.2e-7371.58protein ALP1-like [Quercus suber][more]
XP_031101555.11.7e-7268.48protein ALP1-like [Ipomoea triloba] >XP_031101556.1 protein ALP1-like [Ipomoea t... [more]
Match NameE-valueIdentityDescription
AT5G35695.15.0e-3039.47CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G41980.17.5e-2641.79CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.12.3e-1441.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10890.17.5e-1043.94unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439... [more]
AT5G28730.14.6e-0742.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 2..125
e-value: 8.3E-17
score: 61.3
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 1..176
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g014240.1Lcy09g014240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding