Lcy09g014240 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTAACATGTATAATGTTTGGATGGGTATATATGCAATTCATCTATGCTTTATGTACATTCTCAAGGATTCAATTGATGTATTTAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG ATGCAATTCATCTATGTTTTACCTGGATGGGAAGGTTCAGCTTCTGACTCAAGAGTCTTACGAGATGCTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGGTTGTTACTATCTATGTGATGCTGGCTATACAAATGGTGAAGGATTTTTGGCACCTTACAGAGGACAACGATATCATTTAAATGATTGGATGCAAGGATATCAACCAAGAACTCCAGCTGAATTTTTTAATATGAAGCATTCCTCGGCAAGAAATGTAATAGAACGAGCATTTGGACTGTTAAAAATTCGATGGGCTATTCTTCGAGGGAAATCTTATTATCCAGTAAAAGTTCAATGTCGGATGATCACTGCTTGTTGCCTCATTCATAATCTTATAAGAAGAGAAATGCCTGTAGATCCTTTAGAAGAAGAAGTTGGAGACACTCATTCAAGCACTTTTGACATAGATAGTGATCGAATAACACATGTTGAGAGTTCAAGTGAATGGACGAATTGGAGAGATAATTTAGCAATTGAGATGTTTGAGGAATGGAGAGGCATTAGACATTAG MQFIYVLPGWEGSASDSRVLRDAVSRRNGLKIPKGCYYLCDAGYTNGEGFLAPYRGQRYHLNDWMQGYQPRTPAEFFNMKHSSARNVIERAFGLLKIRWAILRGKSYYPVKVQCRMITACCLIHNLIRREMPVDPLEEEVGDTHSSTFDIDSDRITHVESSSEWTNWRDNLAIEMFEEWRGIRH Homology
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A5B7B0E0 (DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031750 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.4e-74 Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 0
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2N9HMW2 (DDE Tnp4 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40922 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 4.4e-74 Identity = 130/184 (70.65%), Postives = 153/184 (83.15%), Query Frame = 0
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2N9FLC7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15416 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.8e-74 Identity = 130/184 (70.65%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A5B7B2I9 (DDE Tnp4 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031749 PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73 Identity = 132/183 (72.13%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Lcy09g014240 vs. ExPASy TrEMBL
Match: A0A2K3LNH7 (DDE Tnp4 domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g036086 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 7.0e-72 Identity = 129/184 (70.11%), Postives = 147/184 (79.89%), Query Frame = 0
BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_038904441.1 (protein ALP1-like [Benincasa hispida]) HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_040362734.1 (protein ALP1-like isoform X1 [Rosa chinensis]) HSP 1 Score: 288.1 bits (736), Expect = 5.3e-74 Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 0
BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_040362735.1 (protein ALP1-like isoform X2 [Rosa chinensis]) HSP 1 Score: 288.1 bits (736), Expect = 5.3e-74 Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 0
BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_023911371.1 (protein ALP1-like [Quercus suber]) HSP 1 Score: 287.0 bits (733), Expect = 1.2e-73 Identity = 131/183 (71.58%), Postives = 149/183 (81.42%), Query Frame = 0
BLAST of Lcy09g014240 vs. NCBI nr
Match: XP_031101555.1 (protein ALP1-like [Ipomoea triloba] >XP_031101556.1 protein ALP1-like [Ipomoea triloba]) HSP 1 Score: 283.1 bits (723), Expect = 1.7e-72 Identity = 126/184 (68.48%), Postives = 146/184 (79.35%), Query Frame = 0
BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 128.6 bits (322), Expect = 5.0e-30 Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 0
BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 7.5e-26 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 0
BLAST of Lcy09g014240 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Lcy09g014240 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Lcy09g014240 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 4.6e-07 Identity = 27/64 (42.19%), Postives = 33/64 (51.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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