Lcy09g013750 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g013750
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncalmodulin binding protein PICBP-like isoform X3
LocationChr09: 15379241 .. 15379624 (+)
RNA-Seq ExpressionLcy09g013750
SyntenyLcy09g013750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGAGATTGTGTTGAAGTTTCTTCTTTTATCGTGGACGATGAGGCTGAATCGAGTAATGAAGAGGACAGCAAACCAGTTGCAGAGGACATCTCCAATGGATCCACGGACTCTGATGTTGGTTTAAGTGAAGAAGTGACTAAAGGAATCTTCTTCCATGGGGATGAGTATGAGTATGATGCTGATTTGACGGATTTAGAGATGGAAGAGTGGGAGGAGCAACAGTTTTTAAGCATGGAAAGTGATGGTTTGGATGAGCTTGAAGATCAATCAAATGTCAAAAATGAGGTTTTACCAGAAGAGACTGGTTTGCACAATGAAGAACTCATTGGATCTGGTGATGTTGTCAAAGATTGTAAAGGGGTGTTTTTCAGAACATAG

mRNA sequence

ATGAATGGAGATTGTGTTGAAGTTTCTTCTTTTATCGTGGACGATGAGGCTGAATCGAGTAATGAAGAGGACAGCAAACCAGTTGCAGAGGACATCTCCAATGGATCCACGGACTCTGATGTTGGTTTAAGTGAAGAAGTGACTAAAGGAATCTTCTTCCATGGGGATGAGTATGAGTATGATGCTGATTTGACGGATTTAGAGATGGAAGAGTGGGAGGAGCAACAGTTTTTAAGCATGGAAAGTGATGGTTTGGATGAGCTTGAAGATCAATCAAATGTCAAAAATGAGGTTTTACCAGAAGAGACTGGTTTGCACAATGAAGAACTCATTGGATCTGGTGATGTTGTCAAAGATTGTAAAGGGGTGTTTTTCAGAACATAG

Coding sequence (CDS)

ATGAATGGAGATTGTGTTGAAGTTTCTTCTTTTATCGTGGACGATGAGGCTGAATCGAGTAATGAAGAGGACAGCAAACCAGTTGCAGAGGACATCTCCAATGGATCCACGGACTCTGATGTTGGTTTAAGTGAAGAAGTGACTAAAGGAATCTTCTTCCATGGGGATGAGTATGAGTATGATGCTGATTTGACGGATTTAGAGATGGAAGAGTGGGAGGAGCAACAGTTTTTAAGCATGGAAAGTGATGGTTTGGATGAGCTTGAAGATCAATCAAATGTCAAAAATGAGGTTTTACCAGAAGAGACTGGTTTGCACAATGAAGAACTCATTGGATCTGGTGATGTTGTCAAAGATTGTAAAGGGGTGTTTTTCAGAACATAG

Protein sequence

MNGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYDADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCKGVFFRT
Homology
BLAST of Lcy09g013750 vs. ExPASy TrEMBL
Match: A0A5D3BL25 (Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00710 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  VSS  V  E + S+EED+KPVAE+IS+GS + +VGL EEVT+G FFHGDEYE D
Sbjct: 326 SGDCAGVSSSTVGYEMKLSSEEDNKPVAENISDGSMEYEVGLGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEEQQFLSME+DGLDE+EDQSN   E + E   L N EL GSGD V    
Sbjct: 386 AASTDTEMEEWEEQQFLSMENDGLDEVEDQSNAVTEDISEVAHLQNGELAGSGDFVNKKS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. ExPASy TrEMBL
Match: A0A6J1DUK3 (uncharacterized protein LOC111024494 OS=Momordica charantia OX=3673 GN=LOC111024494 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29
Identity = 78/126 (61.90%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  V+SF V++E ESSNEED K V+E IS+ S  S++ LSEEVT G+F HG+EYE D
Sbjct: 323 DGDCTCVTSFTVNNEVESSNEEDDKLVSEKISDVSMVSELCLSEEVTGGMFGHGNEYEDD 382

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEE+QFLSME D LD LEDQ N +   L +ET L + EL+G G VVKDCK
Sbjct: 383 AGSTDTEMEEWEERQFLSMEGDDLDGLEDQLNAETVCLSDETRLQDGELVGYGQVVKDCK 442

Query: 122 GVFFRT 128
           GVF +T
Sbjct: 443 GVFSKT 448

BLAST of Lcy09g013750 vs. ExPASy TrEMBL
Match: A0A1S3CPK8 (uncharacterized protein LOC103503348 OS=Cucumis melo OX=3656 GN=LOC103503348 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  VSS  V  E + S+EED+KPVAE+IS+GS + +VGL EEVT+G FFHGDEYE D
Sbjct: 326 SGDCAGVSSSTVGYEMKLSSEEDNKPVAENISDGSMEYEVGLGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEEQQFLSME+DGLDE+EDQSN   E + E   L N EL GSGD V    
Sbjct: 386 AASTDTEMEEWEEQQFLSMENDGLDEVEDQSNAVTEDISEVAHLQNGELAGSGDFVNKKS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. ExPASy TrEMBL
Match: A0A0A0KTR6 (CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G451650 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.7e-27
Identity = 76/123 (61.79%), Postives = 89/123 (72.36%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GD   VSS  V+ E +SSNEED+KPVAE+IS+GS + +VG+ EEVT+G FFHGDEYE D
Sbjct: 326 SGDRAGVSSSTVEYEMKSSNEEDNKPVAENISDGSMEYEVGVGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EME+WEEQQFLSME+DGLDE+EDQSN   E L E   L N EL GS   V    
Sbjct: 386 AASTDSEMEKWEEQQFLSMENDGLDEVEDQSNAVTEDLSEVAHLQNGELAGSVGFVNKNS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. ExPASy TrEMBL
Match: A0A6J1K187 (uncharacterized protein LOC111489230 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489230 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.4e-24
Identity = 73/114 (64.04%), Postives = 80/114 (70.18%), Query Frame = 0

Query: 1   MNGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEY 60
           MNGDC  VS++ V DE E ++E DSKPV E I +GS D       EVT+GIFFHGDEYE 
Sbjct: 328 MNGDCAGVSAYNVHDEVELNDEGDSKPVVESIYDGSMDF------EVTEGIFFHGDEYED 387

Query: 61  DADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSG 115
           DA  TD+EMEEWEEQQFLSMESDGLDELEDQS        EET L N EL G G
Sbjct: 388 DAGWTDIEMEEWEEQQFLSMESDGLDELEDQS--------EETHLQNGELAGFG 427

BLAST of Lcy09g013750 vs. NCBI nr
Match: XP_022157883.1 (uncharacterized protein LOC111024494 [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29
Identity = 78/126 (61.90%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  V+SF V++E ESSNEED K V+E IS+ S  S++ LSEEVT G+F HG+EYE D
Sbjct: 323 DGDCTCVTSFTVNNEVESSNEEDDKLVSEKISDVSMVSELCLSEEVTGGMFGHGNEYEDD 382

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEE+QFLSME D LD LEDQ N +   L +ET L + EL+G G VVKDCK
Sbjct: 383 AGSTDTEMEEWEERQFLSMEGDDLDGLEDQLNAETVCLSDETRLQDGELVGYGQVVKDCK 442

Query: 122 GVFFRT 128
           GVF +T
Sbjct: 443 GVFSKT 448

BLAST of Lcy09g013750 vs. NCBI nr
Match: XP_008465741.1 (PREDICTED: uncharacterized protein LOC103503348 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  VSS  V  E + S+EED+KPVAE+IS+GS + +VGL EEVT+G FFHGDEYE D
Sbjct: 326 SGDCAGVSSSTVGYEMKLSSEEDNKPVAENISDGSMEYEVGLGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEEQQFLSME+DGLDE+EDQSN   E + E   L N EL GSGD V    
Sbjct: 386 AASTDTEMEEWEEQQFLSMENDGLDEVEDQSNAVTEDISEVAHLQNGELAGSGDFVNKKS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. NCBI nr
Match: KAA0066039.1 (dentin sialophosphoprotein-like [Cucumis melo var. makuwa] >TYJ99856.1 dentin sialophosphoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GDC  VSS  V  E + S+EED+KPVAE+IS+GS + +VGL EEVT+G FFHGDEYE D
Sbjct: 326 SGDCAGVSSSTVGYEMKLSSEEDNKPVAENISDGSMEYEVGLGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EMEEWEEQQFLSME+DGLDE+EDQSN   E + E   L N EL GSGD V    
Sbjct: 386 AASTDTEMEEWEEQQFLSMENDGLDEVEDQSNAVTEDISEVAHLQNGELAGSGDFVNKKS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. NCBI nr
Match: XP_004143746.1 (calmodulin binding protein PICBP [Cucumis sativus] >KGN51106.1 hypothetical protein Csa_008654 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 9.8e-27
Identity = 76/123 (61.79%), Postives = 89/123 (72.36%), Query Frame = 0

Query: 2   NGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEYD 61
           +GD   VSS  V+ E +SSNEED+KPVAE+IS+GS + +VG+ EEVT+G FFHGDEYE D
Sbjct: 326 SGDRAGVSSSTVEYEMKSSNEEDNKPVAENISDGSMEYEVGVGEEVTEGTFFHGDEYEDD 385

Query: 62  ADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDCK 121
           A  TD EME+WEEQQFLSME+DGLDE+EDQSN   E L E   L N EL GS   V    
Sbjct: 386 AASTDSEMEKWEEQQFLSMENDGLDEVEDQSNAVTEDLSEVAHLQNGELAGSVGFVNKNS 445

Query: 122 GVF 125
           G F
Sbjct: 446 GNF 448

BLAST of Lcy09g013750 vs. NCBI nr
Match: XP_038907163.1 (calmodulin binding protein PICBP [Benincasa hispida])

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 79/124 (63.71%), Postives = 86/124 (69.35%), Query Frame = 0

Query: 1   MNGDCVEVSSFIVDDEAESSNEEDSKPVAEDISNGSTDSDVGLSEEVTKGIFFHGDEYEY 60
           M+G C  VSS  V DE E SNEED+K VAE+IS+GS D +VGL EE T+GI FHG   E 
Sbjct: 322 MSGYCAGVSSSTVGDEMELSNEEDNKSVAENISDGSMDYEVGLGEEGTEGI-FHG--VED 381

Query: 61  DADLTDLEMEEWEEQQFLSMESDGLDELEDQSNVKNEVLPEETGLHNEELIGSGDVVKDC 120
           DA  TD EMEEWEEQQFLSMESDGLDE+ED SN     L EET L N EL GS DVV   
Sbjct: 382 DAGSTDTEMEEWEEQQFLSMESDGLDEVEDHSNAVTGGLSEETCLLNGELAGSDDVVNKK 441

Query: 121 KGVF 125
            G F
Sbjct: 442 SGDF 442

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BL252.3e-2963.41Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1DUK32.3e-2961.90uncharacterized protein LOC111024494 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A1S3CPK82.3e-2963.41uncharacterized protein LOC103503348 OS=Cucumis melo OX=3656 GN=LOC103503348 PE=... [more]
A0A0A0KTR64.7e-2761.79CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G451650... [more]
A0A6J1K1876.4e-2464.04uncharacterized protein LOC111489230 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
XP_022157883.14.7e-2961.90uncharacterized protein LOC111024494 [Momordica charantia][more]
XP_008465741.14.7e-2963.41PREDICTED: uncharacterized protein LOC103503348 [Cucumis melo][more]
KAA0066039.14.7e-2963.41dentin sialophosphoprotein-like [Cucumis melo var. makuwa] >TYJ99856.1 dentin si... [more]
XP_004143746.19.8e-2761.79calmodulin binding protein PICBP [Cucumis sativus] >KGN51106.1 hypothetical prot... [more]
XP_038907163.11.6e-2463.71calmodulin binding protein PICBP [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g013750.1Lcy09g013750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005516 calmodulin binding