Lcy09g008330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g008330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein COP1 SUPPRESSOR 2-like
Location	Chr09: 7650699 .. 7651614 (+)
RNA-Seq Expression	Lcy09g008330
Synteny	Lcy09g008330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAACAATCGAAAAAGAAGAATTTCCGGAAGAGGAATTGTTACGATACAGAAGATGGAGGAGATGGGCCAAACTCCGTTAGCACCAAATCGGAGGAGGAAGAAGAAGAGCACCGGATGGCATTAGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAAAGGAGGGCCGGAATTCCTGCAGTTCGCGCAGTATCGACGCAGACCACCACCGCCGGTGCTGGCGGCGGCAGCAGCGGTGGCGGTCTTGTTCGGAAATCCACGGACGCTAACAGTAAAATTGGTGGCGGCGGGGGCAATAAGAATGAAAGCGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGACACTTTCGCTCAAGAAACTGCCGTCATGGTTGAAGATCCTAATATGTATTATTCCCCTTAATTTTGACGTCTATCAACAAATACTTTCCATTTGTAAATTAGATTCTAGTGATTGAGTCGCAGGATATTCGTCTGTGTTTAAAATTGGAGCTTTTTTGAACAGGTTGAAGTATATTGAACAAGAACTTGCGAAGAAAAGGGGAAGAACTGTAGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAGCTATACAAAATTCCGGAGCATCTTAAAGTGAGTGAGTAGCCAATGTAGTGCTCTTGTCTCTCCTCTTGCAGTTCTTTTGTTAATTTCTATACGGCTGAGTGCTGCGTTAGATTTTTGTTTGAATGATCAAAACAAATACTAGAATTTGTCCGGTTTATGTATTCTGGGACTTGTTTACACTAATCATTCATGGATTGTTGTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAGTATGCCCTTTCCCCTCCTTTTTGA

mRNA sequence

ATGAATCAACAATCGAAAAAGAAGAATTTCCGGAAGAGGAATTGTTACGATACAGAAGATGGAGGAGATGGGCCAAACTCCGTTAGCACCAAATCGGAGGAGGAAGAAGAAGAGCACCGGATGGCATTAGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAAAGGAGGGCCGGAATTCCTGCAGTTCGCGCAGTATCGACGCAGACCACCACCGCCGGTGCTGGCGGCGGCAGCAGCGGTGGCGGTCTTGTTCGGAAATCCACGGACGCTAACAGTAAAATTGGTGGCGGCGGGGGCAATAAGAATGAAAGCGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGACACTTTCGCTCAAGAAACTGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTATATTGAACAAGAACTTGCGAAGAAAAGGGGAAGAACTGTAGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAGCTATACAAAATTCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAGTATGCCCTTTCCCCTCCTTTTTGA

Coding sequence (CDS)

ATGAATCAACAATCGAAAAAGAAGAATTTCCGGAAGAGGAATTGTTACGATACAGAAGATGGAGGAGATGGGCCAAACTCCGTTAGCACCAAATCGGAGGAGGAAGAAGAAGAGCACCGGATGGCATTAGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAAAGGAGGGCCGGAATTCCTGCAGTTCGCGCAGTATCGACGCAGACCACCACCGCCGGTGCTGGCGGCGGCAGCAGCGGTGGCGGTCTTGTTCGGAAATCCACGGACGCTAACAGTAAAATTGGTGGCGGCGGGGGCAATAAGAATGAAAGCGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGACACTTTCGCTCAAGAAACTGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTATATTGAACAAGAACTTGCGAAGAAAAGGGGAAGAACTGTAGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAGCTATACAAAATTCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAGTATGCCCTTTCCCCTCCTTTTTGA

Protein sequence

MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAVRAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEYALSPPF

Homology

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BLAST of Lcy09g008330 vs. ExPASy Swiss-Prot
Match: F4HVZ5 (Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.0e-45
Identity = 110/196 (56.12%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 7   KKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAVRAVS 66
           K+NFRKR+  + E+  D   +  +   EEEE+ R+ALEEVKFLQK RER+ GIPA+    
Sbjct: 4   KRNFRKRSFEEEEEDNDVNKAAIS---EEEEKRRLALEEVKFLQKLRERKLGIPAL---- 63

Query: 67  TQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFAQETAV 126
                               S+ A S I  G     E    EG+K++LVLQDTFAQETAV
Sbjct: 64  --------------------SSTAQSSI--GKVKPVEKTETEGEKEELVLQDTFAQETAV 123

Query: 127 MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQ 186
           ++EDPNM+KYIEQELAKKRGR ++  E  EN+LK+ EDELYKIP+HLKVK+R+S ESSTQ
Sbjct: 124 LIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQ 170

Query: 187 WTTGIAEVQLPIEYAL 203
           WTTGIAEVQLPIEY L
Sbjct: 184 WTTGIAEVQLPIEYKL 170

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BLAST of Lcy09g008330 vs. ExPASy Swiss-Prot
Match: Q3TQI7 (Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 64/199 (32.16%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 8   KNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAV----- 67
           K FR+R            +S S + E+E EE R+ LEE + +Q  R+R  G+ A      
Sbjct: 6   KTFRRRRA----------DSESEEDEQESEEVRLKLEETREVQNLRKRPNGVSAAALLVG 65

Query: 68  RAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFAQ 127
             V  +TT        + GG+V        K+   G +K        +++DL L  +F+ 
Sbjct: 66  EKVQEETTLVDDPFQMATGGMVDM-----KKLKERGKDK------VSEEEDLHLGTSFSA 125

Query: 128 ETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNE 187
           ET    ED +M+KYIE EL K++G   +  + A+   K AED LY++PE+++V      E
Sbjct: 126 ETNRRDEDADMMKYIETELKKRKGIVEQEEQKAKP--KNAEDCLYELPENIRVSSAKKTE 181

Query: 188 S--STQWTTGIAEVQLPIE 200
              S Q  +GI EV L I+
Sbjct: 186 EMLSNQMLSGIPEVDLGID 181

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BLAST of Lcy09g008330 vs. ExPASy Swiss-Prot
Match: Q9NZ63 (Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 68/202 (33.66%), Postives = 99/202 (49.01%), Query Frame = 0


Query: 7   KKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAV---- 66
           +K FR+R        GD   S S + E++ EE R+ LEE + +Q  R+R  G+ AV    
Sbjct: 5   RKIFRRRR-------GD---SESEEDEQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  -RAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFA 126
              V  +TT          GG+V        K+   G +K        +++DL L  +F+
Sbjct: 65  GEKVQEETTLVDDPFQMKTGGMVDM-----KKLKERGKDK------ISEEEDLHLGTSFS 124

Query: 127 QETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRN 186
            ET    ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V    
Sbjct: 125 AETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSSAK 181

Query: 187 SNES--STQWTTGIAEVQLPIE 200
             E   S Q  +GI EV L I+
Sbjct: 185 KTEEMLSNQMLSGIPEVDLGID 181

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BLAST of Lcy09g008330 vs. ExPASy Swiss-Prot
Match: Q5RC87 (Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.5e-06
Identity = 67/202 (33.17%), Postives = 98/202 (48.51%), Query Frame = 0


Query: 7   KKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAV---- 66
           +K FR+R        GD   S S + E++ EE R+ LEE + +Q  R+R  G+ AV    
Sbjct: 5   RKIFRRRR-------GD---SESEEDEQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  -RAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFA 126
              V  +TT          GG+V        K+   G +K        +++DL L  +F+
Sbjct: 65  GEKVQEETTLVDDPFQMKTGGMVDM-----KKLKERGKDK------ISEEEDLHLGTSFS 124

Query: 127 QETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRN 186
            ET    ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V    
Sbjct: 125 AETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSSAK 181

Query: 187 SNES--STQWTTGIAEVQLPIE 200
             E   S Q  +GI EV   I+
Sbjct: 185 KTEEMLSNQMLSGIPEVDQGID 181

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BLAST of Lcy09g008330 vs. ExPASy TrEMBL
Match: A0A6J1K2G2 (protein COP1 SUPPRESSOR 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489492 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.1e-89
Identity = 183/203 (90.15%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQSKKKNFRKRNCYD EDG DG NS STKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQSKKKNFRKRNCYDIEDGEDGANSTSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGS-SGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDT 120
           A+ +VS QT+T GA G S  GGGLVRKSTDAN+K GGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANNKTGGGGGSKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEYAL 203
           SNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKL 203

[Close]

BLAST of Lcy09g008330 vs. ExPASy TrEMBL
Match: A0A6J1K0C9 (protein COP1 SUPPRESSOR 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489492 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.1e-89
Identity = 183/203 (90.15%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQSKKKNFRKRNCYD EDG DG NS STKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQSKKKNFRKRNCYDIEDGEDGANSTSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGS-SGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDT 120
           A+ +VS QT+T GA G S  GGGLVRKSTDAN+K GGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANNKTGGGGGSKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEYAL 203
           SNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKL 203

[Close]

BLAST of Lcy09g008330 vs. ExPASy TrEMBL
Match: A0A5D3BEG5 (Hepatocellular carcinoma-associated antigen 59 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00320 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.1e-89
Identity = 185/202 (91.58%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SKKKNFRKRNCYD+EDGGD  NSV T   EEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEGNSV-TAITEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTF 120
           AV  VSTQ TTAGAGG S GGGLVRKS DANSK GGGGGNKNESAGGEGDKDDLVLQDTF
Sbjct: 61  AVPPVSTQITTAGAGGASGGGGLVRKSADANSKTGGGGGNKNESAGGEGDKDDLVLQDTF 120

Query: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180
           AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS
Sbjct: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180

Query: 181 NESSTQWTTGIAEVQLPIEYAL 203
           NESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 NESSTQWTTGIAEVQLPIEFKL 201

[Close]

BLAST of Lcy09g008330 vs. ExPASy TrEMBL
Match: A0A0A0KLP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.1e-89
Identity = 187/216 (86.57%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SKKKNFRKRNCYD+EDGGD  NSV+  SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTT--------------AGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAG 120
           AV  VS QTTT              AGAGG S GGGLVRKSTDANSK GGGGGNKNESAG
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAG 120

Query: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180
           GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL
Sbjct: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180

Query: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEYAL 203
           YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKL 216

[Close]

BLAST of Lcy09g008330 vs. ExPASy TrEMBL
Match: A0A1S3CQV4 (uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.1e-89
Identity = 185/202 (91.58%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SKKKNFRKRNCYD+EDGGD  NSV T   EEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEGNSV-TAITEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTF 120
           AV  VSTQ TTAGAGG S GGGLVRKS DANSK GGGGGNKNESAGGEGDKDDLVLQDTF
Sbjct: 61  AVPPVSTQITTAGAGGASGGGGLVRKSADANSKTGGGGGNKNESAGGEGDKDDLVLQDTF 120

Query: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180
           AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS
Sbjct: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180

Query: 181 NESSTQWTTGIAEVQLPIEYAL 203
           NESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 NESSTQWTTGIAEVQLPIEFKL 201

[Close]

BLAST of Lcy09g008330 vs. NCBI nr
Match: KAG7016665.1 (putative protein C9orf78 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 187/206 (90.78%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQSK+KNFRKRNC DTEDGGDG NS +TKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGS-SGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDT 120
           A+ +VS QT+T GA G S  GGGLVRKSTDANSK GGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEYALSPP 206
           SNESSTQWTTGIAEVQLPIEY LSPP
Sbjct: 181 SNESSTQWTTGIAEVQLPIEYVLSPP 206

[Close]

BLAST of Lcy09g008330 vs. NCBI nr
Match: XP_011654560.1 (protein COP1 SUPPRESSOR 2 [Cucumis sativus] >KAE8648310.1 hypothetical protein Csa_004675 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 187/202 (92.57%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SKKKNFRKRNCYD+EDGGD  NSV+  SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTF 120
           AV  VS QTTTAGAGG S GGGLVRKSTDANSK GGGGGNKNESAGGEGDKDDLVLQDTF
Sbjct: 61  AVPPVSAQTTTAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDTF 120

Query: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180
           AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS
Sbjct: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180

Query: 181 NESSTQWTTGIAEVQLPIEYAL 203
           NESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 NESSTQWTTGIAEVQLPIEFKL 202

[Close]

BLAST of Lcy09g008330 vs. NCBI nr
Match: XP_038877898.1 (protein COP1 SUPPRESSOR 2 [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 186/202 (92.08%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQ KKKNFR+RNCYD+EDGGDG +SV+TKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQYKKKNFRRRNCYDSEDGGDGESSVTTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTF 120
           AV  VS+QTTT GAGG SSGGGLVRKSTDA+SKIGGGGGNKNE+AGGEGDKDDLVLQDTF
Sbjct: 61  AVPPVSSQTTTTGAGGASSGGGLVRKSTDASSKIGGGGGNKNENAGGEGDKDDLVLQDTF 120

Query: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNS 180
           AQETAVMVEDPNMLKYIEQELAKKRGRTVET E AENDLKQAEDELYKIPEHLKVKRRNS
Sbjct: 121 AQETAVMVEDPNMLKYIEQELAKKRGRTVET-EAAENDLKQAEDELYKIPEHLKVKRRNS 180

Query: 181 NESSTQWTTGIAEVQLPIEYAL 203
           NESSTQWTTGIAEVQLPIEY L
Sbjct: 181 NESSTQWTTGIAEVQLPIEYKL 201

[Close]

BLAST of Lcy09g008330 vs. NCBI nr
Match: XP_023549511.1 (protein COP1 SUPPRESSOR 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQSK+KNFRKRNCYDTEDG DG NS +TKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGS-SGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDT 120
           A+ +VS QT+T GA G S  GGGLVRKSTDANSK GGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEYAL 203
           SNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKL 203

[Close]

BLAST of Lcy09g008330 vs. NCBI nr
Match: KAG6579146.1 (Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.2 bits (866), Expect = 5.0e-89
Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNQQSKKKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQQSK+KNFRKRNC DTEDGGDG NS +TKSEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AVRAVSTQTTTAGAGGGS-SGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDT 120
           A+ +VS QT+T GA G S  GGGLVRKSTDANSK GGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEYAL 203
           SNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKL 203

[Close]

BLAST of Lcy09g008330 vs. TAIR 10
Match: AT1G02330.1 (CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 4.3e-46
Identity = 110/196 (56.12%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 7   KKNFRKRNCYDTEDGGDGPNSVSTKSEEEEEEHRMALEEVKFLQKQRERRAGIPAVRAVS 66
           K+NFRKR+  + E+  D   +  +   EEEE+ R+ALEEVKFLQK RER+ GIPA+    
Sbjct: 4   KRNFRKRSFEEEEEDNDVNKAAIS---EEEEKRRLALEEVKFLQKLRERKLGIPAL---- 63

Query: 67  TQTTTAGAGGGSSGGGLVRKSTDANSKIGGGGGNKNESAGGEGDKDDLVLQDTFAQETAV 126
                               S+ A S I  G     E    EG+K++LVLQDTFAQETAV
Sbjct: 64  --------------------SSTAQSSI--GKVKPVEKTETEGEKEELVLQDTFAQETAV 123

Query: 127 MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQ 186
           ++EDPNM+KYIEQELAKKRGR ++  E  EN+LK+ EDELYKIP+HLKVK+R+S ESSTQ
Sbjct: 124 LIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQ 170

Query: 187 WTTGIAEVQLPIEYAL 203
           WTTGIAEVQLPIEY L
Sbjct: 184 WTTGIAEVQLPIEYKL 170

The following BLAST results are available for this feature:

BLAST of Lcy09g008330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HVZ5	6.0e-45	56.12	Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1	[more]
Q3TQI7	2.2e-07	32.16	Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV...	[more]
Q9NZ63	1.1e-06	33.66	Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf...	[more]
Q5RC87	5.5e-06	33.17	Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=...	[more]

BLAST of Lcy09g008330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K2G2	4.1e-89	90.15	protein COP1 SUPPRESSOR 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1K0C9	4.1e-89	90.15	protein COP1 SUPPRESSOR 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A5D3BEG5	7.1e-89	91.58	Hepatocellular carcinoma-associated antigen 59 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KLP5	7.1e-89	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=3 SV=1	[more]
A0A1S3CQV4	7.1e-89	91.58	uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 ...	[more]

BLAST of Lcy09g008330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016665.1	1.4e-91	90.78	putative protein C9orf78 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011654560.1	1.8e-91	92.57	protein COP1 SUPPRESSOR 2 [Cucumis sativus] >KAE8648310.1 hypothetical protein C...	[more]
XP_038877898.1	1.2e-90	92.08	protein COP1 SUPPRESSOR 2 [Benincasa hispida]	[more]
XP_023549511.1	3.8e-89	90.15	protein COP1 SUPPRESSOR 2 [Cucurbita pepo subsp. pepo]	[more]
KAG6579146.1	5.0e-89	90.15	Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy09g008330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02330.1	4.3e-46	56.12	CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (Inte...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
IPR010756	Telomere length and silencing protein 1	PFAM	PF07052	Hep_59	coord: 119..202 e-value: 8.3E-19 score: 68.2
IPR010756	Telomere length and silencing protein 1	PANTHER	PTHR13486	TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER	coord: 4..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g008330.1	Lcy09g008330.1	mRNA