Lcy09g007780 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCTTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGCTACGAGGAGTTTGAGGATCCTGTAATAGAGCTGAACCAAGAAGCAACGGTTGTGACCACGCACCGAGCGAACGCCTGTGTTGTGAATGCCACTGAGCCAGAGAATGTCAACGATGAAATGTTCTTCAGCAGAGAGCAACAAGCTGCGGTGTGGCAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACCCCAACGGAAATGTTGTAACCCCGGCCAAAACTCCACGTCCTTTACTAACCTGGAAATGA ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCTTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGCTACGAGGAGTTTGAGGATCCTGTAATAGAGCTGAACCAAGAAGCAACGGTTGTGACCACGCACCGAGCGAACGCCTGTGTTGTGAATGCCACTGAGCCAGAGAATGTCAACGATGAAATGTTCTTCAGCAGAGAGCAACAAGCTGCGGTGTGGCAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACCCCAACGGAAATGTTGTAACCCCGGCCAAAACTCCACGTCCTTTACTAACCTGGAAATGA ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCTTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGCTACGAGGAGTTTGAGGATCCTGTAATAGAGCTGAACCAAGAAGCAACGGTTGTGACCACGCACCGAGCGAACGCCTGTGTTGTGAATGCCACTGAGCCAGAGAATGTCAACGATGAAATGTTCTTCAGCAGAGAGCAACAAGCTGCGGTGTGGCAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACCCCAACGGAAATGTTGTAACCCCGGCCAAAACTCCACGTCCTTTACTAACCTGGAAATGA MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEEFEDPVIELNQEATVVTTHRANACVVNATEPENVNDEMFFSREQQAAVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKTPRPLLTWK Homology
BLAST of Lcy09g007780 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66 Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Lcy09g007780 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66 Identity = 128/144 (88.89%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Lcy09g007780 vs. ExPASy TrEMBL
Match: A0A6J1H530 (uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC111460648 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.9e-66 Identity = 128/145 (88.28%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of Lcy09g007780 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65 Identity = 127/144 (88.19%), Postives = 133/144 (92.36%), Query Frame = 0
BLAST of Lcy09g007780 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65 Identity = 127/144 (88.19%), Postives = 133/144 (92.36%), Query Frame = 0
BLAST of Lcy09g007780 vs. NCBI nr
Match: XP_038886392.1 (uncharacterized protein LOC120076591 [Benincasa hispida]) HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73 Identity = 136/144 (94.44%), Postives = 138/144 (95.83%), Query Frame = 0
BLAST of Lcy09g007780 vs. NCBI nr
Match: XP_023512486.1 (uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 hypothetical protein SDJN03_07439, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032888.1 hypothetical protein SDJN02_06938, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 264.2 bits (674), Expect = 6.4e-67 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of Lcy09g007780 vs. NCBI nr
Match: XP_022990795.1 (uncharacterized protein LOC111487577 [Cucurbita maxima]) HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66 Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Lcy09g007780 vs. NCBI nr
Match: XP_011656615.1 (uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_004865 [Cucumis sativus]) HSP 1 Score: 261.2 bits (666), Expect = 5.4e-66 Identity = 128/144 (88.89%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Lcy09g007780 vs. NCBI nr
Match: XP_022959632.1 (uncharacterized protein LOC111460648 [Cucurbita moschata]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 128/145 (88.28%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of Lcy09g007780 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21 Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of Lcy09g007780 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08 Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Lcy09g007780 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 8.0e-07 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Lcy09g007780 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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