Lcy09g006520 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAGTCCCGAAGGCGCAAGCTTCTTCTTCTCTTTTGCAGAATACTCCAATTGCTGCGTAGAGTCCACGAAAGTTCAATTAACAGCAAATTACTTGGATCGGTTATTTCACATATCCTCGATCGCCATGGGTTGCTCCTCCTCTGTCCCAGGTATTTTCAATTCTTGAATTTCGTTGCTTGAGCCTTTTTAGGGTTATAAGATTCTTTATTTGTCCATTGAAGTCTGATCAAAGAGGGTGCATTGAGAATTTAGGAGGTAGATTGTCTGGTCAGTTCTATGTTGTTAATTATTGAGTTGTCTTGGTTCCTTAATTTTTTTTTTTTTAATGGTGACATTAGGGTTTGGTGGGTTTTATCCTGAGGTGTCTACTATTCAGTTTTAACTTTTACTTATAGGAGTTTATGTCGAGTTTGATTGATCTTTTGAGGGGTTTATTGTGCAGACAGGGCTTCTGGGCGACCGGGTGGGCTTAATCCAGAGAACAGTGCAGCTGATTCCAAGAATTTGCGCGTCAAGGTATTTGAGAGGCAGCCAACTTATTAACCTATTGTCCTTTTCTTTTATTTTTTATTGTTAATGGATTAAGGCCCCTTAAATGAGTTTTATATCAAACTGATAACTGATGATCTTGTTGACTTACAATTCTTTCACGTAAGAAGACAAACATAAGATGGCTAAGATGTAACAATGCTTTCCTCGTTCGGGAATTGATAATTGAGCTAAATACGTTTTTGAGTTTAATGATAATTGAAGTTAAAGATATGCTAATACGCCAGATGCTCTGCTTGCTTAGAAAGCTTAAAAGTTTTTATGATATCATCTTTTCCATCTTCTCTTTATGTCTCCATGCAGCTTGTCTTGTTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTTAGTTAGGATTATATTACAGTCCATAAATTCTTAAAATAAATCTATGCTTACTACAAATAAATTTATGTTTTTATCCTTCCATTCCCAAAGCGATTACAATGTTTTGATTATGAATGTTTGTCAAACAATCTAGGTAACTGTTGGAGCATCATTCTTATCACAAACAATAGCTTTACAAGATTCCACGACAGTGAAGTTTGAAATATGGGATACCGCCGGGCAAGAGAGGTAGAATTGTCTAAATCTCTAGTAGATATTCTCATTGGTAGCCCTTTTCTGGCTTGTTTCATGTTCACAAGAGCCTTTTGGTTGCAAGAGGTTATCACTGTTGATTTGTCTTGATTTAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCCGTTGCAGTTATTGTATATGATATAACGAGCTCAGATTCCTTTGCTAAAGCACAATATTGGGTTAAGGTATGCTTTAAAATTATTACTTTTTGTACTATATATACTGCTTATGGTTGTTGTATCTATTCAAGTGGAAATTGTCATGCCCATGACCCTTATACTAGCAATGATCTCGTTTCACAGCCATTATGCATAATAAAGAAAAACCAAAGAGGCAATTCCTCATTAGTTGAGCTTGCCACTTACTAGTTGCCAAATTTGAAACGAAGTGGGATTCCTTTTAATCTATGGATAGATGATCAGATAACTACATAACAGCTTTTTCGTAGTAGATAATATGTGTTACATCTTTGCCTCTTGATAGCAATTCTTTCTTTTTATGCGACTTCTTTGTTAATCAGTTTCCAATAAAAAGAGTGCTATGTTTCTCAAAAAAAATAATAAATAAATAAAAAGAGTGCTATTATGGATTTTAGGCATTTGAATTGTTTTGGGTGTTTTGTTTGGATAGGAACCGCAGAATTTCTAATAACAAGTTGGATTTTTCGTCAGTTTGAGTAAAAATAGTTATTTATGGTGTAAAAATGTAGTCTTACGATATCACCTCTTTGAACTCCCAAAAAGAAAAAAAGGATGTCACCTCTTCTTTTTCGAGTTTGCATGCATTTGTGTGGTTCTTTTGCTTTTCCTTTGATGATCCTCATTCTCCTGACTCCTACTATTCTTTTTAATTTTTTACTTTATCTATGATGTATTCTTTCCTATCCACAAAGAAAAAAATAGGAAGACAATACAATCTTTTGTTTGTTCTTTTTCTTGCTTCAAATCAATCAATGTTGATCATGTTAACAAAGTCCAGTCCTCTTTTAAAAATATCAACAAAATTCTCTTGACAGAGATTTTTTTGTGCACAATTAGTTGTTAAAACGTATAACTCTTTCAAGTAGAAATATATTAAAAGGCTGTCTTTGAATGTAAGCCACAATCTTTTCTGGGGGAAAAACCTAAACAACACCTTCGTTAATGTGTTCATTTGAGTTGGTTATCCTCTGACTAATTCACAATCTTCACAATTCATATTGTGCACTTACAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGAAAAGTCTCTGTTCAGGTAAATTCAGTGTTATTCAATCAAATGCATCATTCTTCTCCTGTCTTTATTTATAATTTGTTGTGTTATTATTATATTATTTTTTTTAAAATGGGGAAAAGATGTTTTAGCTCGCTAATGTGAGATACTTATGTTTCACTTTTAAAGGATGGGACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTATTCCTGATTTATTCCTTTTAGTACGACTTTCATAGTTTCTGTTCATGAACGAGCAAGGTAGATCATTGTGTATGGTTATTTTTGTGATATTCAACTATTGGCAGTGGGGTATTGAACAGTTTTAATTATTTTCTGCCGTCCATGTTTTCATAGTGCATGTGAATGGGAAGGATATTTGAATATTGCTGAGTGTTGACGGTTAGAAGTTCAGAATCTGTTTAAGTCATTGTCATAGCCAGAAAACTTTATAATATTCTTTAGAGTTGATCAATTCTCTATTGGTGATAGTATTGAACTCCATTAGGTGTGAAGTTGGAACGTTCTTTCACCCCAGCTGTTTGTTGGTGGTTGCATCTAACATTATTCTAACTCCATAAGGTGTCAAATCAATTTCATGCTGTCAGAACGTTCACCTCAGGTTTCTATTGGTGGATCTATCTTGTCATGATTGATCAAGGCCTCCCTTAAAATTGTGGCCCGCAGGATGAACAAGTATATCGATTTCGATTGGAAATTTTCTGACTGTTAGCTCTTAGCTGATTTGTCATTTGTATGGACTGGAGTGCTTTTTTCCCCTCTCAAATTTGTCTGTGGTGCATGTTTTATTGCACCTCTCTCTCTGTAACTCGTGCTTCTACTAGATGCTTTATGAAACAGCTAATAATTAGGATTCTTTTAAAAAAGTTAATATCCTTGGTCTTTTTTGTTGAATGATGGACGGCTTGTCCCCTGAGAGACTGAGACATTGGCATATCTTCTTATCCTTTGATTACAAATACGTATTTCTTATCAAAAAATGGAAAATCCTTGAGAAACACATTTTGCTGCTTGAATTATGGGAAGTTGTAGTTGTCGTGCTCACTCGATGAGACCCTATTTGGTTTTCATCTAAAGTTTCTCTAGGAATGTAATATCACTATCTCAAGAGGGGGAAAATTTAAGATCCATGGCCTTGTAGATTCCATCAGATGTTTCTGTTCAAATACACTTGAGATCAACCATTTCTTCTCTATTTGGTTTGGCAGGAAATTGCAAAGCGATTACCACGACCAACTTCCTCATGATTGGAACTCAGGTGTGACATGAATTATTTTATCAGCAGCTTATTTTACAAGAATCAGCTTGCTCCCATGTGATCTATGTATAGTTTGGTGAGTCCTGCAGTCTTTCGCTTTGTTATTTGCTGTGACTTGTTGATATTTTCAGTCTAAAGTGTAACATTAAAATAGAGATGAAAAATGGTGAAAGATTCATTCCCCTTTAAATTCATAAGCTGCAGTTGTAGACAATATTTGGTGTGAGTGATAGAAACATTACTTGGGTTTCTTCTTTTTCTTTTTAAATAGAATTCAGTGGGAGTGGAGAAATTGAAACTCTATATGAGATCTTTAAATCAATTAAAGGGATCAGATAAAGCATTATGTAATGCCCTTTGGTTCTTTTCTTTCCC ACCAGTCCCGAAGGCGCAAGCTTCTTCTTCTCTTTTGCAGAATACTCCAATTGCTGCGTAGAGTCCACGAAAGTTCAATTAACAGCAAATTACTTGGATCGGTTATTTCACATATCCTCGATCGCCATGGGTTGCTCCTCCTCTGTCCCAGACAGGGCTTCTGGGCGACCGGGTGGGCTTAATCCAGAGAACAGTGCAGCTGATTCCAAGAATTTGCGCGTCAAGCTTGTCTTGTTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTAACTGTTGGAGCATCATTCTTATCACAAACAATAGCTTTACAAGATTCCACGACAGTGAAGTTTGAAATATGGGATACCGCCGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCCGTTGCAGTTATTGTATATGATATAACGAGCTCAGATTCCTTTGCTAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGAAAAGTCTCTGTTCAGGATGGGACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCAAAGCGATTACCACGACCAACTTCCTCATGATTGGAACTCAGGTGTGACATGAATTATTTTATCAGCAGCTTATTTTACAAGAATCAGCTTGCTCCCATGTGATCTATGTATAGTTTGGTGAGTCCTGCAGTCTTTCGCTTTGTTATTTGCTGTGACTTGTTGATATTTTCAGTCTAAAGTGTAACATTAAAATAGAGATGAAAAATGGTGAAAGATTCATTCCCCTTTAAATTCATAAGCTGCAGTTGTAGACAATATTTGGTGTGAGTGATAGAAACATTACTTGGGTTTCTTCTTTTTCTTTTTAAATAGAATTCAGTGGGAGTGGAGAAATTGAAACTCTATATGAGATCTTTAAATCAATTAAAGGGATCAGATAAAGCATTATGTAATGCCCTTTGGTTCTTTTCTTTCCC ATGGGTTGCTCCTCCTCTGTCCCAGACAGGGCTTCTGGGCGACCGGGTGGGCTTAATCCAGAGAACAGTGCAGCTGATTCCAAGAATTTGCGCGTCAAGCTTGTCTTGTTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTAACTGTTGGAGCATCATTCTTATCACAAACAATAGCTTTACAAGATTCCACGACAGTGAAGTTTGAAATATGGGATACCGCCGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCCGTTGCAGTTATTGTATATGATATAACGAGCTCAGATTCCTTTGCTAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGAAAAGTCTCTGTTCAGGATGGGACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCAAAGCGATTACCACGACCAACTTCCTCATGA MGCSSSVPDRASGRPGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPRPTSS Homology
BLAST of Lcy09g006520 vs. ExPASy Swiss-Prot
Match: Q9CB01 (Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 5.0e-89 Identity = 170/201 (84.58%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-58 Identity = 109/173 (63.01%), Postives = 144/173 (83.24%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy Swiss-Prot
Match: Q58DS9 (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58 Identity = 111/184 (60.33%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy Swiss-Prot
Match: P51147 (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.0e-57 Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy Swiss-Prot
Match: P51148 (Ras-related protein Rab-5C OS=Homo sapiens OX=9606 GN=RAB5C PE=1 SV=2) HSP 1 Score: 224.6 bits (571), Expect = 1.0e-57 Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy TrEMBL
Match: A0A1S3C444 (ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy TrEMBL
Match: A0A0A0KJ92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 9.8e-104 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy TrEMBL
Match: A0A6J1GY77 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy TrEMBL
Match: A0A6J1JQ66 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111487316 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 4.1e-102 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Lcy09g006520 vs. ExPASy TrEMBL
Match: A0A6J1JTN6 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489640 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.6e-101 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Lcy09g006520 vs. NCBI nr
Match: XP_008456515.1 (PREDICTED: ras-related protein RABF1 [Cucumis melo]) HSP 1 Score: 387.1 bits (993), Expect = 9.1e-104 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Lcy09g006520 vs. NCBI nr
Match: XP_038884272.1 (ras-related protein RABF1 [Benincasa hispida]) HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Lcy09g006520 vs. NCBI nr
Match: XP_004140073.1 (ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa_002805 [Cucumis sativus]) HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Lcy09g006520 vs. NCBI nr
Match: XP_022956144.1 (ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032982.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of Lcy09g006520 vs. NCBI nr
Match: XP_023531159.1 (ras-related protein RABF1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102 Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of Lcy09g006520 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 328.6 bits (841), Expect = 3.6e-90 Identity = 170/201 (84.58%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of Lcy09g006520 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein ) HSP 1 Score: 311.6 bits (797), Expect = 4.5e-85 Identity = 161/189 (85.19%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of Lcy09g006520 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 216.5 bits (550), Expect = 2.0e-56 Identity = 103/173 (59.54%), Postives = 140/173 (80.92%), Query Frame = 0
BLAST of Lcy09g006520 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 ) HSP 1 Score: 214.2 bits (544), Expect = 9.8e-56 Identity = 103/173 (59.54%), Postives = 139/173 (80.35%), Query Frame = 0
BLAST of Lcy09g006520 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D ) HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39 Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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