Lcy09g003920 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g003920
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Binding partner of ACD11 1-like
Location	Chr09: 3463614 .. 3467373 (+)
RNA-Seq Expression	Lcy09g003920
Synteny	Lcy09g003920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGTATCCCCTCCCAGAGTACGAGCTCAGAGCTACAGAGTTTGATGATGCGGGATTCTCTGCCAACAGAAAAACTCCCAACGAAGAAGATAAGACTTTATTCCAACCCACGCCCCTTCCACCACAATATCCCACACGCGCCAATACCACTTCTTCGTGCTCCACAAGCGCCCTCTAAGCGGCTGGAATCGTTCCTCCACAAAGTTCAGTACCATAACCAACCAAACTGATACCAAAAACAAAAAAATGTCGGCTAAGTTTTCAGCTCTCAGCTCAGCCCCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGTACGCCATAGGAAAAGTTTCAAACTTTTTTTTTAACTTTTCTTTCGATTCCCATACTAATTTTCATGTGATTGGTTTCAATTTCATCTTTTATCTCTGCCTTTGATCGTTTTGGCTAATGGGTTTGCTTTAGGTTTCCATTTCAAGATCTGGGTTGTGGATTAATTTTAGGAAAGTCCTTAAATTTTTCATCTTTTTGGTGAAATTGGAGTTGCTCTTGCTTGTAGTTGTAATTTCCCCTTTTTCAGATACCCTTTTGCTCAAATATTCTGGGAATCTCTCAGTCTTTCACATTTCTGCTTTGTTTCCCCTTTCTTCACTTTTCCCCAAGGCACATTGCTGCTTGTTCCCTGTCTTGTATGGATATATACAGTCATGAGATTGAGTTAACTTAAAATGTTAATGGAGACTTAGTTTTATAATGGATATAAGAAGGCAATGGTGTATTTAACTTAAGCTAGAAGCAACACTTTTTCAAAGGTTTTCACACTTTTGGGATGAGCCTGCAAGTGATAAATTATAACTTTGGACCATTGATGATTATTATGGATGTCAGAGTCATCATATACCAAGTTTAGAATGCTTATCATCTAAATGCAATGGACCATTCTTTTTGGGGGAGTGGAAGGTGCTGAAAAGAAAAGGGAAAAGGCTGATTTTTATGAATATGAAGTGTTGAGATAATTAGTATTTCAGTTTTCTCTAAATAGGCTGGTGAAAGATTGCTTTTTTGTATCAATCTTTCCAGGTATTTTACATCAATCCAAGTTTTCAACATATAGAGCTGTGTGGAACAATGTACTCTGGGGGTTATACTGCTGAAGTAACAAGCTTGTCACCTAAAGCCACAGAGAATGATCTTTATGACTTTTTTTCTCATTGTGGCACGGTCGAGCATGTCGAAATCCTCAGGTGAATGAAACATAAATCCCTTGGCTTGATGGTTTGTTACAATTTGTAATCATATATATGTGAAGTTATTGACATTAACTTATTATGCTAATGTTTGCTGCCCCCCCCCCCCCCCCCCCAAATTGTTTCCAATTAAAACCGGTTTTAATTTCATCAACTCTGACAAGAAGCGACCCCGGCTCATCATAGATTTTCACTGAATTATGAGATCTTACATAGAAACTTACTGAAGCTTCAAGAATCAAGAAATAACTTGCAAAATCTGAATTTTATATTGATTATTGCTGTTGTGATTAAGTAGTAAAAAGAAGAGGGGTTTTTTTACTGAAGAGAGTAAACTGGACCTCTGAAGTCTACATTGATTTTTTAGTATGCTGAAATTTTCAATTAGCAGTAAACCAAACTATGTGAAAACATTTTCTTTTTTGCAATAACAGATCGGGCGATCATGCGTGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGTAAGTTCTTGAGGATTATTTGATTTTGCTTGACTTGAGATTCTTCTGTACTCCATTTTGAAATGACTTGCTTCTCTCCTTTTTGAGTACTTTTCCTACTGTTTCTGCTCGCTTGCATGCGTTTCGATGATGTATGTAAACACACAAATCCACTCTTCAAGGTGAGCAGATGAGGAGGAGAAGAAGTAGGCATTTGTATAGGTTGTCATTCGGGATCGTTAGGACATACATATCTCGAGCGACCCTCATGGTTTGAGATGATTTTGCATTATTTGAATGAAATATAAACATAAGTAACAACAAAAGAAGTTAGGTTTTAGTTAGGAAGCTGTTAGTTGTTGTATCAGTTTCATTACCTTCCTAAACTACTTCTTGTACACTGGTTATTTATAGAGCCTTGCTGAGTTGAATAAAATGATTGAGCAAGTTTTTTTACTCTCTAGCTTTGTTATGGTATCAGAGGAAATCTAGTTTCCTCTAGAGAAGAGTCTTGCCTTTTCCCTTCAATGGCCGAAAATTCTTCCTCAATTCAACCCACCAGCCAGTCCGTCATCGATCTGTATGTCAGCCCATATTATCTTCATCATTCGGATGGAACGAATCTCGTTCTTGTCATCGATGTGTATGTTAATAAGACCTCAAGGTTTGTATACTTGCCTCTTTGTTTCTTTCTTTTTCAACATATTTTAGTTTCTCCAACCCTGGCTGAGAGTGTTTGAGTCACTCAATGTGCAAATCTGCAACAACTTGAGGGAAAATCATTTGAATCATTTTCCATTTGTACTTTCAATCATTCCCATGAGCATGGCTAATGGATATTTATTCTTGTGAGTCTTATGGATTGTAATTCTTATGATTGAGTTCAATTTTTAATGATTCCAAAGAACTCTTCTAAGTTTGAGATGGTCCATCCCTGAATCTTAAGCACCTACACATAACCATCCAAATTAATCATCTTCAAATATCACTTCTGAGCTTTCATATTGCAGTTCATTTGCTGATTTTGGTGTTCCAGGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCTCGGTGGGGAACATATATAGATGAATCAGAAACTTGGAACAGCCCTTCACAAATGACCGACGACAATACAAGCTTAATGGTAAGCACAAATAGATAGTTGCTCGGTCTTTAACAACGTCGACATGTCGTAACTCATCCCGAGCCTACTCACTACATATTGCTTGGTTGAGTCACACAATATTTAGAATTGATCTCCTTAAATTTCTTGATGAAAACCAGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTGACTGTGGCACAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTCTTAACCAAAGATGCACTTGTAAAAGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGACGAGAGGTTTCACGTCTCCGATATCACCAAATCCGCTGCAGTGGTTACTGGAACAGCGGCCGTGGTGGCGGTGGCAGTGACAGGGAAAGCGGCGATGGCAGCGGGTAATGCTGTAGTAAACAGCAGCTACTTTTCGAAGGGCGCATTATGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGTGAGTAAGAATAGCAGTAAAGGAATAACAAAACTTTGAAACATACCAACAAAAGAAAAAAACTTTCATTCTTTAGCCTCATCTTGAAAATATAGATATACTCAAGTTGTTTTCTCTTGCTGTTTGTCACTTAAATCCAGAATCTTGTGATGGCAACTTGGTATGATTGTAAGTAATCATCCCCATGTTAAATTGCTAATAAGATCAATTACTTGAGTCAAATTTTAATCTCTATATTATGTAAAACTATATATAAATATGTAACTGTAAACTACTCAAAGTGATGCAATTTGAATCCATTATGC

mRNA sequence

GCCGTATCCCCTCCCAGAGTACGAGCTCAGAGCTACAGAGTTTGATGATGCGGGATTCTCTGCCAACAGAAAAACTCCCAACGAAGAAGATAAGACTTTATTCCAACCCACGCCCCTTCCACCACAATATCCCACACGCGCCAATACCACTTCTTCGTGCTCCACAAGCGCCCTCTAAGCGGCTGGAATCGTTCCTCCACAAAGTTCAGTACCATAACCAACCAAACTGATACCAAAAACAAAAAAATGTCGGCTAAGTTTTCAGCTCTCAGCTCAGCCCCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGTATTTTACATCAATCCAAGTTTTCAACATATAGAGCTGTGTGGAACAATGTACTCTGGGGGTTATACTGCTGAAGTAACAAGCTTGTCACCTAAAGCCACAGAGAATGATCTTTATGACTTTTTTTCTCATTGTGGCACGGTCGAGCATGTCGAAATCCTCAGATCGGGCGATCATGCGTGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCTCGGTGGGGAACATATATAGATGAATCAGAAACTTGGAACAGCCCTTCACAAATGACCGACGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTGACTGTGGCACAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTCTTAACCAAAGATGCACTTGTAAAAGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGACGAGAGGTTTCACGTCTCCGATATCACCAAATCCGCTGCAGTGGTTACTGGAACAGCGGCCGTGGTGGCGGTGGCAGTGACAGGGAAAGCGGCGATGGCAGCGGGTAATGCTGTAGTAAACAGCAGCTACTTTTCGAAGGGCGCATTATGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGTGAGTAAGAATAGCAGTAAAGGAATAACAAAACTTTGAAACATACCAACAAAAGAAAAAAACTTTCATTCTTTAGCCTCATCTTGAAAATATAGATATACTCAAGTTGTTTTCTCTTGCTGTTTGTCACTTAAATCCAGAATCTTGTGATGGCAACTTGGTATGATTGTAAGTAATCATCCCCATGTTAAATTGCTAATAAGATCAATTACTTGAGTCAAATTTTAATCTCTATATTATGTAAAACTATATATAAATATGTAACTGTAAACTACTCAAAGTGATGCAATTTGAATCCATTATGC

Coding sequence (CDS)

ATGTACTCTGGGGGTTATACTGCTGAAGTAACAAGCTTGTCACCTAAAGCCACAGAGAATGATCTTTATGACTTTTTTTCTCATTGTGGCACGGTCGAGCATGTCGAAATCCTCAGATCGGGCGATCATGCGTGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCTCGGTGGGGAACATATATAGATGAATCAGAAACTTGGAACAGCCCTTCACAAATGACCGACGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTGACTGTGGCACAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTCTTAACCAAAGATGCACTTGTAAAAGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGACGAGAGGTTTCACGTCTCCGATATCACCAAATCCGCTGCAGTGGTTACTGGAACAGCGGCCGTGGTGGCGGTGGCAGTGACAGGGAAAGCGGCGATGGCAGCGGGTAATGCTGTAGTAAACAGCAGCTACTTTTCGAAGGGCGCATTATGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGTGAGTAAGAATAGCAGTAAAGGAATAACAAAACTTTGA

Protein sequence

MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVKYIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVSKNSSKGITKL

Homology

[Close]

BLAST of Lcy09g003920 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-26
Identity = 89/254 (35.04%), Postives = 134/254 (52.76%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGA 66
           + +V +LS  ATE+D+ +FFS  G VE ++I +S +H  +AYVTF++    ETA+LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  EILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVVKT 126
            I DQ V I     Y        SP       T     E           V  A+ VV +
Sbjct: 67  SIADQSVIIELAPNY--------SPPAAPHAETQSSGAE---------SVVQKAEDVVSS 126

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGM----ETVKYI 186
           ML+KG++L KDA+ KAKAFD+    ++TA A V+ L  +IGL++ + AG     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAA 246
           D+ F V++ TKS             A   +   +AG+AV+ + Y   G  W +   +R A
Sbjct: 187 DQNFQVTERTKS-----------VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 229

Query: 247 KAAAEVSKNSSKGI 257
           +AA EV + + + +
Sbjct: 247 QAAGEVGQKTKEKV 229

[Close]

BLAST of Lcy09g003920 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.5e-04
Identity = 62/225 (27.56%), Postives = 100/225 (44.44%), Query Frame = 0


Query: 10  VTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGAEIL 69
           VT++SP+ TE  + DFFS CG V ++   +SG+   TA + F    A +TA+LL  A + 
Sbjct: 7   VTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDALLG 66

Query: 70  DQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVVKTMLS 129
              + I+        SE   + S  T D       +       P  A      ++  +LS
Sbjct: 67  QNKIQIT--------SEDGGAAS--TTDQGGAGGDQAARQEDKPRSA------IISELLS 126

Query: 130 KGYVLTKDALVKAKAFDDSCQVSATAAAKV-SELSNRIGLTETIHAGMETVKYIDERFHV 189
           +GY L+   L K+   D S  VS+     + S LS    + E  H   E    +D +F +
Sbjct: 127 RGYHLSDVTLEKSIQLDQSYGVSSKFKGILESALSGVRSVNERYHV-TEKANEVDNKFAI 186

Query: 190 SD-ITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGAL 233
           SD + +++++V   +     A+   A  +AG  V N+    K  L
Sbjct: 187 SDKLNRTSSLV---STYFHKALETAAGTSAGQKVQNAYEDGKNQL 210

[Close]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL
Match: A0A5A7T9G0 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003300 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.0e-124
Identity = 236/254 (92.91%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES+TWNSP+QMT+DNTSLMVTEIMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSK 255
           AAKAAAE  KNSSK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL
Match: A0A6J1C268 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.2e-123
Identity = 236/259 (91.12%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY GGYTAEVTSLSPKATE D+YDFFSHCG VEHVEILRSG++ACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWGTYIDES+T NSPS+ TDDNTSLMVT+IMHSVYTPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTE IHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV +TGKAAMAAGNA+VNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSKGITKL 260
           AA AAA+V KN+SKGITKL
Sbjct: 241 AANAAADVGKNTSKGITKL 259

[Close]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL
Match: A0A5D3CUV4 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00390 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 231/247 (93.52%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES+TWNSP+QMT+DNTSLMVTEIMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAE 248
           AAKAAAE
Sbjct: 241 AAKAAAE 247

[Close]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL
Match: A0A0A0KS66 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.2e-121
Identity = 230/254 (90.55%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 120 MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 179

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES++WNSP+QMT+DNTSLM T+IMHSV+TPGEAVT+A
Sbjct: 180 ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 239

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI++GMETVK
Sbjct: 240 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 299

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 300 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 359

Query: 241 AAKAAAEVSKNSSK 255
           AAKAAAE  K+ SK
Sbjct: 360 AAKAAAEAGKSISK 373

[Close]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL
Match: A0A6J1GKI7 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119
Identity = 228/259 (88.03%), Postives = 242/259 (93.44%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATEND+YDFFSHCG V+HVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWGTY DES  WN+PSQMTD+NTS MV EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+ IH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE++HVSDIT+S A+VTGTAAVVA+ V GKAAMAAG AVVNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSKGITKL 260
           A+KAAAEV   +SKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Lcy09g003920 vs. NCBI nr
Match: KAA0039508.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123
Identity = 236/254 (92.91%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES+TWNSP+QMT+DNTSLMVTEIMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSK 255
           AAKAAAE  KNSSK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of Lcy09g003920 vs. NCBI nr
Match: XP_022134513.1 (binding partner of ACD11 1 [Momordica charantia])

HSP 1 Score: 451.1 bits (1159), Expect = 6.7e-123
Identity = 236/259 (91.12%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY GGYTAEVTSLSPKATE D+YDFFSHCG VEHVEILRSG++ACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWGTYIDES+T NSPS+ TDDNTSLMVT+IMHSVYTPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTE IHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV +TGKAAMAAGNA+VNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSKGITKL 260
           AA AAA+V KN+SKGITKL
Sbjct: 241 AANAAADVGKNTSKGITKL 259

[Close]

BLAST of Lcy09g003920 vs. NCBI nr
Match: XP_038890704.1 (binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner of ACD11 1 [Benincasa hispida] >XP_038890706.1 binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121
Identity = 233/254 (91.73%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MYS GYTAEVTSLSPKATEND+YDFFSHCG VEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYSEGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWGTYIDES+TWNS S +T+DNTSLMVTEIMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTWNSHSHITNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETIHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIHAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYF+KGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFAKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSK 255
           AAKAAAEV  N+SK
Sbjct: 241 AAKAAAEVGNNNSK 254

[Close]

BLAST of Lcy09g003920 vs. NCBI nr
Match: TYK15262.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 445.3 bits (1144), Expect = 3.7e-121
Identity = 231/247 (93.52%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES+TWNSP+QMT+DNTSLMVTEIMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAE 248
           AAKAAAE
Sbjct: 241 AAKAAAE 247

[Close]

BLAST of Lcy09g003920 vs. NCBI nr
Match: XP_004148690.1 (binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ACD11 1 [Cucumis sativus] >KAE8648916.1 hypothetical protein Csa_009005 [Cucumis sativus])

HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120
Identity = 230/254 (90.55%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY+GGYTAEVTSLSPKATEND+YDFFSHCGTVEHVEILRSGD+ACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFISRWG YIDES++WNSP+QMT+DNTSLM T+IMHSV+TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTETI++GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
           YIDE+FHVSDIT+SAA VTGTAAVVAV VTGKAAMAAGNAV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVSKNSSK 255
           AAKAAAE  K+ SK
Sbjct: 241 AAKAAAEAGKSISK 254

[Close]

BLAST of Lcy09g003920 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-66
Identity = 140/253 (55.34%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETA 60
           MY  GY A+VT+LSP+ATE D++ FFSHCG VE VEI      A TAYVTFRDA+AL+ A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  ILLSGAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVA 120
           +LLSGA I+DQ V+IS +G Y+ ES          +++ S+ VT       +PGEA+TVA
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESNNLRQ-----EEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVK 180
           QQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K++E+S+ +GLT+ I + ME V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 YIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSR 240
             DE++H SD TKSA +VTGTAAV A  +TGK A AA  +VVNS YF+ GALW SD L R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 241 AAKAAAEVSKNSS 254
           AAKAAA +    S
Sbjct: 241 AAKAAAHIGGGGS 248

[Close]

BLAST of Lcy09g003920 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-61
Identity = 131/250 (52.40%), Postives = 170/250 (68.00%), Query Frame = 0


Query: 5   GYTAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLS 64
           GY  EVT LSP  T NDL DFFS  GT++ ++I+RSG+ ACTAYV F+D+++ ETA+LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GAEILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVV 124
           GA ILDQ V I+RWG + +E + WN+ S+  +D +         S +  GEAVT AQ+VV
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQ-HYAQRSEFNAGEAVTKAQEVV 125

Query: 125 KTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGMETVKYIDE 184
           K ML+ G+VL KDAL KAKAFD+S  VSA A A+VS+L  RIGLT+ I  G+E V+  D+
Sbjct: 126 KIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQ 185

Query: 185 RFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKA 244
           R+HVSD  KS           AV  TG+ A AA  +VVNSSYFS GALW+S  L RAAKA
Sbjct: 186 RYHVSDTAKS-----------AVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKA 243

Query: 245 AAEVSKNSSK 255
           A+++    S+
Sbjct: 246 ASDLGTRGSR 243

[Close]

BLAST of Lcy09g003920 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 134.8 bits (338), Expect = 9.9e-32
Identity = 89/254 (35.04%), Postives = 141/254 (55.51%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGA 66
           T +V+++S +ATE DL +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  EILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVVKT 126
            I+D  V ++    Y    +   S   + + N S   T    SV+        A+ VV  
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRK------AEDVVSG 124

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAG----METVKYI 186
           M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V+    RIG TE I+ G     E VK +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 187 DERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAA 246
           D++F V++ TKS           A+A   +    AG+A++ + Y   GA WV+   +R +
Sbjct: 185 DQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 241

Query: 247 KAAAEVSKNSSKGI 257
           KAA EV + + + +
Sbjct: 245 KAAEEVGQKAKEKV 241

[Close]

BLAST of Lcy09g003920 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 92/246 (37.40%), Postives = 135/246 (54.88%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGA 66
           + +V ++S  ATE ++++FFS  G +EH+EI +    +  A+VTF D  ALE A+LLSGA
Sbjct: 6   SVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGA 65

Query: 67  EILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEA-----VTVAQ 126
            I+DQ V I+R   Y+   ET     +M D+   L + E      T  +      V+ AQ
Sbjct: 66  TIVDQIVTITRAENYVQRRET--QEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQ 125

Query: 127 QVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGM----E 186
            VV T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKVS    R+GLTE +  G+    E
Sbjct: 126 DVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNE 185

Query: 187 TVKYIDERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDM 244
            VK +D++  VSD T           + A+    +     G+AV +S Y + GA W S  
Sbjct: 186 KVKSVDQKLQVSDKT-----------MAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGA 238

[Close]

BLAST of Lcy09g003920 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.0e-29
Identity = 86/254 (33.86%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDLYDFFSHCGTVEHVEILRSGDHACTAYVTFRDAFALETAILLSGA 66
           T +V+++S  AT+ DL +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  EILDQCVFISRWGTYIDESETWNSPSQMTDDNTSLMVTEIMHSVYTPGEAVTVAQQVVKT 126
            I+D  V +S    Y    E   S  +  D N S    +           +  A+ VV +
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEALAS-LEPKDSNKSPKAGD---------SVLRKAEDVVSS 124

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTETIHAGM----ETVKYI 186
           ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV+    +IG T+ I+ G     E V+ +
Sbjct: 125 MLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREV 184

Query: 187 DERFHVSDITKSAAVVTGTAAVVAVAVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAA 246
           D+++ VS+ TKS           A+A   +    AG+A++ + Y   GA WV+   ++ A
Sbjct: 185 DQKYQVSEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVA 237

Query: 247 KAAAEVSKNSSKGI 257
           KAA EV + + + +
Sbjct: 245 KAAEEVGQKAKEKV 237

The following BLAST results are available for this feature:

BLAST of Lcy09g003920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	3.5e-26	35.04	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	8.5e-04	27.56	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Lcy09g003920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9G0	5.0e-124	92.91	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1C268	3.2e-123	91.12	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 S...	[more]
A0A5D3CUV4	1.8e-121	93.52	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KS66	5.2e-121	90.55	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV...	[more]
A0A6J1GKI7	1.3e-119	88.03	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Lcy09g003920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039508.1	1.0e-123	92.91	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_022134513.1	6.7e-123	91.12	binding partner of ACD11 1 [Momordica charantia]	[more]
XP_038890704.1	2.1e-121	91.73	binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner o...	[more]
TYK15262.1	3.7e-121	93.52	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_004148690.1	1.1e-120	90.55	binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ...	[more]

BLAST of Lcy09g003920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	2.1e-66	55.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	1.6e-61	52.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	9.9e-32	35.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	1.1e-30	37.40	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	6.0e-29	33.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 9.2E-9 score: 45.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 1.6E-9 score: 37.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.79736
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..81 e-value: 7.5E-11 score: 44.1
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..254
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..254
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 9..76 e-value: 3.61982E-32 score: 110.998
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g003920.1	Lcy09g003920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding