Lcy09g000090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DEAD-box ATP-dependent RNA helicase FANCM isoform X6
Location	Chr09: 52361 .. 64582 (-)
RNA-Seq Expression	Lcy09g000090
Synteny	Lcy09g000090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAAAACAAGTTTGGTGTTTTTCATATTCAAGTTTTTCTCCTATAATTATTTTTATGTCAACTGTTTTCTGGGGAAGAAGAAAATCTAACCCTCATGTACAAATGTCTGATATGTGCTAGAGCGTTTGGTACCTTTTTGACATGGTCGCATAACTAAAGCATTCATGCATCGAAGCGTTGAACTTCATCCCAATTGTTTTCGTTATGCTAATTATATAATTTCCTTAACTACTATTACTAGTTTTAGCTTGTGAAGGGTCAGAATTGCAGGGTTACATGAGAAAGCAAACAGTCAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGACTAAATAGCTTCAACTTTCATCCTAGCCCAAGAATGGTGAGATCGTTTGACAGAAGCTTATCACAACATAGTATTCTTTTCTTATACTATCGATTCTTTCCATTATTTAGATTCCCCATACTATCAAACCAGAAGTCCAGTTTGTTAAGCTATCAATCATACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATCCTGTTCAGATAACATCATTTAAGAACAAGCTAACCGACACTGAGACTGAGTTACTTCTCAAGTATTTCCATCCTCATGAAGATGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACATTTCCCTCGAGGACCCATGCAATAATTCATTCAAGTAGAACAATGGTTCTAATTGACACAATGCAACACTTGCAAGGACTGCACTTTTCTAGAGATTCTGAAGCCTTCTCTGTTGAGGTTTGTTTACAAGTTCTATTTTACCTTTTCCCCTCCTAAAAAGAAATTGCTTTCTAGCAATTGGCTTATCATATAACGTGGATGGATTCAGGAGAAATCATGCATTAGAGAAATATTTGAAGCATGCCAGGTTGAACAATGTTACGGGGAGAAAAGAGGTAAAAGCTCAATTGATACGAACTAAATTACATATTTATAATATTTTCTAATTTGGGCTGGAGGACAGTTTCTCAAAAATGAGCAAATAATTTAGAAAGAGAATACCATTGTAGAGGGCCTAATAATTTAGAAAGAGAATATCATTGTGAAGCTTTAAATCTATCTAGCTCAAAGCGTTCAATCCAGCACCTTTACTTATTCTAAAAAATTCTTTGGTTATGCTCTCAAAAACTCTAGGATATTGAATCTTATGAGTTTCCTAGCAACCAAGTATTATAGGACCAAATGATTGTTCCTTGTGATTAATCGAGCCGTGCACGTAAGCGGGCTAGAATAGTTACCGATGACAATAATACATGTGGTTTTGGAAGAAAATTAATTTCATATTATTTCTTAATCTCCAAAATAAAATTAGATATATATCTCATAAAAATACATAAAAGGAAACTATAAAGATAGAATAAAATCTAATCTAAATAAGGAAAAAATAAATTTAAAATGAAACAATCTACGCTCCCCCTCAAGCTGGATTGTATATAGTATACAAGCCAAACTTGGAGTTGAATCCTTCAAAGCTTGTCCTTGGTAATGCTTTGGTGAGAATGTCGGCAACTTGATGACGAGATGGAACATAGTTTAGTTCCACTATTCTACTGTTGACTTTCTCAAATATGAAAGGTCGATCTATCTCTATATGCTTTGTTCTGTCATGATGAACAAAATTCTTTGCAATACTGAGGGCTGATTGACTATCACAAAACATTTTTACTGGATTCTGAGTATCAATTTTCAACTCTGTCAAAAGTTTCTGAATCCATATTCCTTCACATATTCCCAAAGAAAGCATTTTGTATTCAGCTTCTACACTGCTTCTTGCTACAACGACTTGTTTTTTTACTTCTCCAAGTGACCAAGTTACTCCAAACATATGAGAAATTACAATACTATTATTAGATTGTGCCACTTCCATGCCTAGAAAATATCTCAAGCTTCCCAGATCTTTGATTTCAAACTTAGTTGCAAGCATCTTTTTTAGGTTGAGGATCTCTTCTAGGTCATTCCCTGTAAAGATGATGTTATCCACATATACAATCAAAATTGCAATTTTGTTATTTGAGGATTTCACAAACAAGGTATGATTAGCTTGACATTGATAATAGCCACTTTTAATCAGTGTTTTAGTGAATCTGTCAAACCAAGCACGTGGAGATTGTTTTAATTCATATAGAAATTTTTTTAACTCACACGCCAAGTTGCTATTAGACTTGTCTTCCATTCCAGGGGGAATTTGCATATAACTTCTTCCAGATCACCATTCAAGAATGCATTTTTGACATCAAGTTGGTGAAGGGGCCAATCTTGGTTCACAGCTAGAGACAACAGAACACATACAATATTCAATTTCGCAACAGAGGCAAAAGTTTCTTGGTAATTTATACCGTATGACAGAGTAAAACCCTTCGCAACAAGCCTTGCTTTAAATGTTCCACACTGCCATCACATTTGTATTTGACTGTGAAAATCCATTTGCAACCAATTGGATTCTTTCCATGAGGAAGTCTTGTAAGAGTCCACGTTCCATTGCTTTCAAGAGCTTTGATTTCTTCATCCATTGCCTTTTTCCATTTCGGATTTTGAGCGCATCCTGAATGGTTTGTGGAATGTGAATACTGTCTAACTGAGTCCCAAATGCTTTATAAGAAGGAAGCAATTTGCCATATGCAACATTATTTTTCAATGGGATGGCTAGTGCAACTTCTAACACTTTTTCTCTGAGCAATTGGTAGGGTCAAATCATCGGTTACAGGTGCCATAGCGGTGATGTTCTCGTTAGTGGAATTAACGATGATGAATCCGGTTAAGGTGGTTGACATTCTTGGTTTTGCATGGTAGCCTCTTTTCTTCTTGTATAAACAATAGGTGTGCGAGTTTGTGTGGCTTCGACTAGAAATACTAGACTCAGAAATAGGTGGCGCGCTTATGGTAGGAGTTAAGACCTCGTTTATGATGGGAATAATAGGAATGATAGAATAAGGCTCAACATCCAAAGGCTCAAATTCTTGTGTATTATCCCCCTGAATTTGAGACTTGGTAAAGAAAGGATGATTTTCAAAGAATGTAACATCCATGGATGGGTACATTTTTCTAGTGATAGGTGAATAACATCTGTACCCCTTTTTATGGGATGCATAACCTAGAAAAATGCACTTGATGGATTTTGGATCAAGTTTGGACTTGTGAGGAGAATGGTTATGAACAAAGGAAGAACAACCAAACACCCGAAGGGGTAAATTTGAGGAAATGTTTTGGAGTTGGGGGTGAATTTGGAGAAGGACATCTCGAGGGGATTTAAAAGTGAGGACACGACTAGGCAACCTGTTGATAAGAAAGGTTGTAGTGAGAATGGCTTCCCCCAAAAAATGGGTAGGAGCATTAGTAGAAAACATGAGAGAACGGACTACCTCAAGAAGATGTCTACTTTTCCGTTCAGCAATCCCATTTTGTTGAGGAGTGTCCACGCATGAACTAGTATGAACGATACCATGAGATGAGAGATATGGACCAAGAATCAAATTGAAATAGTCTCGAGCATTATTTGTTATGAGAAATTGAATTTTACTTTCAAACTGAGTAGAGATCATAGCATGAAAAGAACGGAAAAGATTTGGTGTTTCATTTTTGTCCTTCATTAGAAATGTCCAAGTCATCTTGGTATGGTCATCAATAAAGGTGAGGAACCATTGTCCTCCTGATATATTTTTCACTCTAGAAGGCCCCTAAATATCACTATGGATAAGTGAAAACGGTTTTGAAGATTTATAGGGTACACTAGGATAAACATTTCTTGTGTGTTTAGATAATTGACAAGTTTCACACTAAAAGAAGCATGACTTTTTATTGATAAATAAATCAGGAAACAACTTTTTCGAGGTTCATGAAATTTGGATGACCAAGGCGTAAATGCCATAACATAACTTGACTTTCAATTGACAAGGACTCTGACTTGGAAACAAAACTAACAGACTGAGAAGAAGACTTAGAACTAGGACTGAAGATGGAACTTGAAGGCCACTTTTCTTGAAGAAGAAAGAGGCCACCATGTTGCTTAGCACCGCCAATCACCTTCCCCAAATCCACCTCTTGAAATTCACACAAGTTTGAGTAAAAATTAGAAATGCAGTTTGAATCACCAGTAAGTTTGCTAACTGAAATCAAATTGAAGTTCAACTTAGGAACATAAAGCACATTAGAGAGAACGAGATCATTTGTCAACTTTATTGACCCTTTCCCTGTAACTTCAGAGAGAGATCCATTAGCTATTCGAACTGTCGAATAGCCAGGTTGGAATTTGAACTGGTGGAATAAGGAAATGTCGTCGGTCATATGGTATGATGCTCCAGAATCCACAATCAAGGTTTAGACTTGTTATGCTGCACAGAAAAACAAGAAAGACCAGTACCTTGATAAGCAAGATTGCTAGAAGGTTTCTCAACTGAGGCTGTGGGTGTAGATGTCGATAATGAGAGATGGCCAATCATTTGCTGTAACACGTCTAATTGTTCAAAACACAATAGAAGTTGGATGTGGAGAAGGAGAAGTAACAACATAAGCATGATTTTAGACCGTCCCTTTCCTCGTTGGTTTCCAATTTGCTGGTTTGCCATGAATTTTCCAACAAGTATCTTGTACATGTCCCACTCTCTTACAATGATCACACCAAGGATGATTGCCTTTCTTGGATTTGTAATCTTGAGATGAACTGTGTGTCAACATGGCCGAAACCTTTGGTCCAGTAGAGGACCCAATCTCAGGCACCATAAAGTGTTTTCTACTTTCTTCACGTCGTACTTTAGCAAAAGCTTCTCTAAGAGAGGGCAGATCTTTTGCTCCCATAATTCTTCCCCTTACGTCATCTAGCTCTTTATTAAGTCCTAGAAGGAACCTCAATATCCTTTTTTTCTCAACTATCTTTTTGTAAAGGGTCATATCTTCTCCACACTTCCATTCGTATGTTTCATACATATCCAAATGTTGCCAGTTTCAAACTAGAAGATTAAAGTACTGAGTAACATTAAGGTCTTCTAGACGTAAATCATACAACCGAGTTTCAATAGCCAATAGAGCAGATGAGTTCTCAGAGCTAGAATAGGTGTCATGGGCCTCCCATATCTCTTTTGCTGTTTTGAACAATAGAAAGTTCTCTCCAACCTCTGGAGTCATAGAGTTCAATAACCAAGACATGACCAAATGATCATCAGTTTTCCATGATCGAAACTTCGGGTCTTTAGCATCCGGTGCGAGGGTATCACCAGTTAGATGACCATCTTTACCATGACCACAGATATATATGAAAATTGATTGATTCCATTGAAGAAAATTGTAACCTTGAAGTTTATGATTAGTCACAATTTGAGGTGAGGAATCGTGAGGTTGGGAGGAGTTTTCATAGCTAACACCTGCTAACCTGTGTTTTGCCATTTGAAATCTCTGAAATTTTTGAACAAACAAATAACCAAATCTGAAAACAAGCAAACTAAACAACCATTGATTTTGTTTCTAGAGAGCCACCAACAACGTAGATGGACCGTACTGAAGACAGACGAGACAAACGAACAAACGAACAAAAGCGGAAGAACCAGACACCCATAGAACAACCAAACGAGCGGACAAAACACGAGCGGTGGACAAAAAAATACAAGTGGCGAATGTGAACCTGAACCCCTGCTGCGAGCGGCGACAAGCGGACAAAAAAAAAATCGCGAACCCGAACCCCTGCTGACAAGCATACGAGCGACGACTTGCGGACGAGTGACGAGCAGTCGAACAGACGAGCGCCGAGTGGTAGACGAACGATCGTGAACTCGAACCCCTGTTGCGAACGTGACAGAAAACTAATTGCGAACGTGAACGATCCGCCGGTGAGTGGGTTGTCGGAGAAAAAGAGATCGTTGTCGGAGTGTTGCCGAAAGGAGAGTTTGCTGGTGAAGGTGGTGTTTGACGGCTAGGGTTTTATTTTAGGGTTTGCTTTGATACCATGTGGTTTTGGGAGAAAATTAATTTCATATTATTTTTGAATCTCCAAAATACAATCTGATATATATCTCTAGAATAAAATCTAATTTAAATAAGTAAAAATCAGTGTTTTAAAAGGCTCAAGGCGCACTAAGGCGCAATGGCCTCCTGGGGCCTAGGCGCAAGGCGCACAAAAAGGAGCGGGCTTTATTATGTAAGGCGCACTATATAGAAAAAAAATTTACAAAAATATATACATGTATATAAAACACTTTCATGGCAAGTAATGAAGTTTTTAACCAAGAAAAATAGATAAAAGATAAATGAGGTTCAAATATTAGTCTTCCAACATAGAGTCAAATGTCAATACTCCACAAAAAAACAATGAGTTTAGTATTGTTAATATGCCTTCCTTGTTGTTTGCTCATCAGTTTATTCACTCATGTATGTACAACATAAGAGCTGGTATTCTTGGATTCTTTCTTCGCTTACAAGCTTGAATATGATATTTGACACTCCGAATGACCAAGGACGGGGGTTTAAAATTAGCTTCATAACAAGTATTTATGTTTAAAAAAATTTAAAACATATATAAAATTGTGAAGCCCCAGAGGCGCCTAAGGCGCGCGCCTCGGGGGCTTCGAGGAAGGCGCGCGCCTTGGCCGCGCCTTCCTCACTGCGCCTCGCTTCTTCGAAGCGAGGCACTAAGGTTGCGCCTTGCGCCTAGGCGCGCCCGGGCGCGCGCCTTTTAAAACACTGGTAAAAATTAAATTTAAAATGACATAATCTACAATACATACATTCACTTTTACATTTCTCAAATAATGCCAATCTTGAGCAGGAGCTTTAATTAATGTTTTTAAAATTTGTTGAAAAAGAAAAATTCTTGCTCCTATCGATTTGTAAATTATTTTGGTGACATCGCAATGTTGAACATAAATTGAACTCATTATGGTGGGGTGTTTCTATTAATACTTTGTTAAAGCTCATGATAATTATTTGTTTAAAATGAATGTTTTGATTATTTCATAGGTTCAATTAATGAAGTCAGCGCTTCAAAAGCAGAATTAGAAGGACCATTAGTCTATCCTGAAGTCTCAGCACCTCCAAATCCTGCGGAAGATAATTGTGTTTCTGATTACTGTTCTCCGAAGCATCCTACAAACATAGACCTCTTTGGTTCTGATTTTGTATCTGTTGGTGCCATGGGAAAGGACCAAATATCACGTTCCCCTGTGTTCTCTTCAAAAAATTTCTTGCATCCCTATTCTATTGCTGCAGGCAGTAAAATATTCTTGAGTTCTTCTGAGCTAGGTTCTTGCTGTGTAAGAACTGTTCAGGATTTGAAGACTGAAGCTGCCAATGAACCAACAACTTCTCAAACAAAATTCTTACAGGATGAGGTTCTACCAAGCCCTGAAACAGGTGATGTAACTGTCTTGGAAGACAAAGCAATGAATCAGATTGAGAAAATTCATCAAAGCACAACCGTGAAGAGAACTTTTTTTCATAAAGGAGATAATGCTGGTGAAAAGCCTGTTGTTTTAGAGATTAAGACACAATTACCCCCAGCTGGTGAATGCAGTATAATCGAGACTCAGCTTAGTCCTCGTCTCACTAATCTAATCGAAAGTGGTTTTGTTCCAGATTCACCCATTGATGATTGTGGTACATGCTATTTTCCAAAATAATACATTATGCTTTATTGATAAAGAGGGAATGTTTAACTGTTCTTTCATTTATTTAGTGAACACAAGAATTTATTCTAATCAGGGTTTTATTTTCCAGGATATACTAGACAAAGGATATATGAATCCACAATATCACAGTTTACCTTGCCTGTCCAAACGGATGTTGAACAGATTTTAAAATCTTCAAGTCCTGGGATAAGCGAAAGAATTAATTGCAATGAGGGATCCCGTGCTGGAAATGACGTTTCTCTCTCTAGTGGTGACGTTCGTCCGTCTGTACTCGAGGAGATTGATAGTGTGGGTATAAAATCACGTGCCTCTGGTTCTCCTGCATTTGATGAAACACGAACTCCCTTGGCCATTATTACAAGCAGTTGTGATACTGAAGATTGGCATTTAGTTACTGGAGAAAAGTCCAGCAGTGTAAAGAAGCCCTGCAAATTTAAAAGGTTGCGGAAGGTTGGAGACGTGGAGAAAAATGAGAACATGGAAATCATGGAAAAAACTTCAGTTTCAACACTGGCAAATATAGTCAAAACTTTTTCTAGCACCAGACAGATGAAAAAAAAGAAACGGGATGGTATTTTCTCTTATAGTTCAATTTTTGGAGAGTCCTTGTCATTGCCAAATATTGTCGAGGATCTAATAGAGCATACTTTAAAAAAAAGTAACTTTGACCTAGTTGCTAATTGTCAATATCAATTGCTTTATATAGGTGAAAGGAGATTTGACGACAATGCTAGAGCATTTATTGAAGAGGAAGCTGAGTAAGTCCATAAATTACCTTGTTAAAGGGACTACGGAGTAAACCAATAAAAGAGTTCAGTGTTAAGTTATACCTTTGATAATGATATGATAGTTCTACTTTGAGTGCACAAGTTAAAAGGAGACAATGATACAGTTGTGAAATTCTTCTGCCTCATTTCTTGTTGGTATCTAGGGTTTCTTCGGATGCTACCATATCTGGGGATGAAGAAGATGACGTGATTAAGAGCTCGTTCGACAGTTTCATAGATGATAGGGTTAGTGCTAGTGCCACGAGTACTCAAGATGAAACAGGCAGACTTGATATGATGGCAATTTACAGGTTTTTATAAAGTCCTCTGTTATTTAATTTTGATGAGTATGTGATGTTCTCTCATTATGCGATAATGTGGCAGATTATACTAGAATACCTTAGTATAAGAAACCTTACTGACCATTCAAATGTTGCGTTATTTTAATTCTGGTAAGAAAAGACGATATGGTGTTGCAAGAGAAGGATAGAAGAATGGGGAACTGTGTTGGGGAACTAAATATTTGGAAGGGAAGACAATTTTGGAATGAGAGTAATCAAGTACTATCGTAGGGGAAAAAGATAATGCTTATCTTAATTTTGAGAGTTTAAAAATTATTCTCATATCTAATATGTGCAATATAGGTCCTTTTATATAGGAGAAAGACCTATTACAAATATGAAAAGGAATAAAAACCATAAAGACTAAATATTTTACCATAAAGATTTACACACAAATATTAGAAATTCCAACAGCTTAACATCTTTAACCCTTTGAATCTGTAGTTTGAGGGTCAATACTAACAGCCGGTTAGTGTCTCAATTTGCAATTGGGGTTTTGGCTTGGAGAGTGGAAATAAGAAGCTTTGGAGGCTAGAATGATAAGTTAGATACTCTTTATGAGTTTAATAGCCTTCTTGATATCTTAATCACCAGTCCTCTTAATATCATTTCTCGAAGAGAAGTGCTAAAAGCCTTTCCTCTCATCAACGAAAATTCTTACATGGGATATTAGGGTTCTTCAAATTCCTTGGGGATTTTGCAGGAATTGTCACTAGTAGGGGTTAAGGTTTTAATTTAAAAAGTCATCAAGCAAAATGGTAAAACTCTATACTAATGCTAGTTGACTGGAGAATTAATTGATCGAAGATCTACATTTTGATATTGCTCTATGTTTTTAGGCAAGTTAGTCACTTGGAGAAGCAAAAAACAACCAATTGTATCAAGAAGCGCTTTAGGATTTCGTCTCTTTTTCCAGTCTGTTAGTTGTTCCATTGGGATGGTTCTAATACCCATTTTTGGGAGGATTCTTGGGTTGGGGATAAACCCTCAAGTGTTGTGTTCCCCCGTCTTTACTAGTTGTCTGAGAACAAGTTGCATTCGGTAGCTTCAGTCTTCCCCAATTTCAATCTTTCTTCTCTTTTCCTTGGCTTTTGTCGCTCCCTCACTGATCGAGAGGCGGCAGAGGTCATCAATCTTCTCTCCCTCTTGGCTGACTAGTCGTTTTCTCTTGGGAGAAAGGACACTAGGTTTTGGACTTCGGAGCCCTCTGAGGGGTTCTCTTGTGCTTCTTTTTTCTGTTCTCTCCTCTCATCTTCCTTCTTTGGGAGCCTCCATTTTCTCCTCTTTGTGGAAGGTCAAAATTCCCAAGAAAGTGAAAGTTCTTTGCCTGGGAAGTTTTACATGGTCGGGTGCATATTCAGGATTTGATCCAACGGTTCTCATTGTTCGTGTTGTGGCTGCAGCGGTGTGTCCTGTGTAGAAGTCAGGAGGAAGACTTAGATCACTTGCTTTGGGATTGTCCGTTTGTCAGCTCTATTTGAAACTAGTTCTTCAGGGTTTTTGGGGTTGTTTCGGCTTGTAAAATTGATTGCTCTTCTATTGTTGAGGAAGTTCTTTGGCATCCCCTTTTCATGATGAAGGGAGAGTCCTATGGCAATTGTACTTTTTTGCTGTTTTGTGGGGTACTTGGCTCGAGAGGAATAGTAGAATTTTTAGAGGGGTGGAGAAATCCATGTATGAATTGTGGGAGACGATTAGGTTTAACTCGTCTTTGTGGGCTTCAATCTCCAAGCTCTTTTGTAATTATCAGCTAGGTCTTATTCTTTTGGATTGAGACACGTTCCTATAGTTTTGGTGGACTTGCTTTTTGTATGCCTTCTTGTATTCTTTCATTTTTTCTCAATGAAAGCGCGGTTTCTTATTAAAAGAAAAAAAATAAGGAAGCATACTAAATACTAAGCTCTGGTTTTGGGAATTTGTGAAGGAATGTGGATTCAGAAGCTTTTGAAATAACTGAAGATATAAACTCAGAGTTCATTCAAAATGTTTTGTAATGGTCAAGCAACAATCAATATTGCAAAGAATCTCGTGAATCATGACAAAACCACCAATTACTGAAAAGGTTAACAATAGCACAATGAAACTAAACTATGTTCCATATTGCCATCAAATTGTTGACATTCTCATCAAAGCACTGTTGGGGACAAGTTTTGATGGATTCAACTTCAAGCTTGGCTTGTATTCTATATACTACCTAGCTTGATGGGAGTGTAGATTTGTAAATAGTATAATCATGTTGAGATTAAAATATTAGTCATTTATCCTTTAATTGTTTTAAAATATCCTTTCCTTTCATAATTAGTTTCCTTAGGTGGAATTTCTCTTGTATTATATTTACGTATTACTTTCTCCATTATTATCCATTATTGGAGCCTATGTGGAATAAGAAAATTAATTTATCCAAAAATATCAAGTAATTTTCTCCTTTTGCCTCCGGATATCTCATAGAATAAACAGTCTCTTCCAAGCTTTACGTTACACGGATGGATTTTTGTTCTACATGTTATATCATGTCATGTGAGACTTGAACTTTGATAATAGATCAATGAACATTGAGGAACCTGTCGTGAAGTTGTATAAAAATCTTTAATTTGTGACCTTCGAAAACTGAACTTTCTACTCTTTAAAAATTAATTAGCATTTACAAGGTGGAGCTATTTCTATAAATGCTGTACTAAAATTGTGATCTTATGTAACAGACGTTCTTTGCTAAGTCAATCACCATTCAGGAGGCTGACTTCACCCCTCGCGACCCAGGTAACTGAAAGTGAAACTTCTGGCAAGACATTGAATGTTTTCCAGGCAATTCTAACAGGAAATGTCAATCAATCTCAGACAATGCATTCAGAACATGTCAAAATGAACCGTATCCCAGAAGTTGTAATTTCTACAACTGGTGGCAGCCCAAGAGTGACAGAAGTAGAAAGCAGGACTCGAAATTTGACATTTTGTGCATCAGAATCTGTTCCTAAACTTAATTTGGATAAACGGTTTGAGTTAGTGGTGGCAGGAAGAGAATCGATGAGCGATGTGGATGCAAATGGAAATGTGTTCGATGATGATGATGAGTTTTATGAAGGTCTAGACCTTGATGCAGTCGAGGCCCAGGCAAAATTGCTCCTTGAAAAGAAAGTTGAGTTGCCTCAGATAATGGTTACTCAGCAACAGAAGAATTTTGATCTTGACACTTCTCCATCTTTTGATCTTGGGATATGACTACTTTTTATGTGCATGACTTGTTCAAATACTTAAATTGCGGGAAAAATAATCAGGAAAGCTTGGTATTTGTTTTCCCAGTAGGACACTCTCTCTAGTCTCTCCGCCTTATTTTCTTCGTGATCAGTAGATATCAAGTTGCTCAAATACTTAAGTTATGACTGTGGTTGGGTGGGGAGTACGAAAAAAACAAATATATATGTATATATTGTACAGAAATTATTGAAATAAGAGCTTCAGTTTTGTTACTG

mRNA sequence

CGAGAAAACAAGTTTGGTGTTTTTCATATTCAAGTTTTTCTCCTATAATTATTTTTATGTCAACTGTTTTCTGGGGAAGAAGAAAATCTAACCCTCATGTACAAATGTCTGATATGTGCTAGAGCGTTTGGTACCTTTTTGACATGGTCGCATAACTAAAGCATTCATGCATCGAAGCGTTGAACTTCATCCCAATTGTTTTCGTTATGCTAATTATATAATTTCCTTAACTACTATTACTAGTTTTAGCTTGTGAAGGGTCAGAATTGCAGGGTTACATGAGAAAGCAAACAGTCAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGACTAAATAGCTTCAACTTTCATCCTAGCCCAAGAATGATTCCCCATACTATCAAACCAGAAGTCCAGTTTGTTAAGCTATCAATCATACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATCCTGTTCAGATAACATCATTTAAGAACAAGCTAACCGACACTGAGACTGAGTTACTTCTCAAGTATTTCCATCCTCATGAAGATGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACATTTCCCTCGAGGACCCATGCAATAATTCATTCAAGTAGAACAATGGTTCTAATTGACACAATGCAACACTTGCAAGGACTGCACTTTTCTAGAGATTCTGAAGCCTTCTCTGTTGAGGAGAAATCATGCATTAGAGAAATATTTGAAGCATGCCAGGTTGAACAATGTTACGGGGAGAAAAGAGGTTCAATTAATGAAGTCAGCGCTTCAAAAGCAGAATTAGAAGGACCATTAGTCTATCCTGAAGTCTCAGCACCTCCAAATCCTGCGGAAGATAATTGTGTTTCTGATTACTGTTCTCCGAAGCATCCTACAAACATAGACCTCTTTGGTTCTGATTTTGTATCTGTTGGTGCCATGGGAAAGGACCAAATATCACGTTCCCCTGTGTTCTCTTCAAAAAATTTCTTGCATCCCTATTCTATTGCTGCAGGCAGTAAAATATTCTTGAGTTCTTCTGAGCTAGGTTCTTGCTGTGTAAGAACTGTTCAGGATTTGAAGACTGAAGCTGCCAATGAACCAACAACTTCTCAAACAAAATTCTTACAGGATGAGGTTCTACCAAGCCCTGAAACAGGTGATGTAACTGTCTTGGAAGACAAAGCAATGAATCAGATTGAGAAAATTCATCAAAGCACAACCGTGAAGAGAACTTTTTTTCATAAAGGAGATAATGCTGGTGAAAAGCCTGTTGTTTTAGAGATTAAGACACAATTACCCCCAGCTGGTGAATGCAGTATAATCGAGACTCAGCTTAGTCCTCGTCTCACTAATCTAATCGAAAGTGGTTTTGTTCCAGATTCACCCATTGATGATTGTGGATATACTAGACAAAGGATATATGAATCCACAATATCACAGTTTACCTTGCCTGTCCAAACGGATGTTGAACAGATTTTAAAATCTTCAAGTCCTGGGATAAGCGAAAGAATTAATTGCAATGAGGGATCCCGTGCTGGAAATGACGTTTCTCTCTCTAGTGGTGACGTTCGTCCGTCTGTACTCGAGGAGATTGATAGTGTGGGTATAAAATCACGTGCCTCTGGTTCTCCTGCATTTGATGAAACACGAACTCCCTTGGCCATTATTACAAGCAGTTGTGATACTGAAGATTGGCATTTAGTTACTGGAGAAAAGTCCAGCAGTGTAAAGAAGCCCTGCAAATTTAAAAGGTTGCGGAAGGTTGGAGACGTGGAGAAAAATGAGAACATGGAAATCATGGAAAAAACTTCAGTTTCAACACTGGCAAATATAGTCAAAACTTTTTCTAGCACCAGACAGATGAAAAAAAAGAAACGGGATGGTATTTTCTCTTATAGTTCAATTTTTGGAGAGTCCTTGTCATTGCCAAATATTGTCGAGGATCTAATAGAGCATACTTTAAAAAAAAGTAACTTTGACCTAGTTGCTAATTGTCAATATCAATTGCTTTATATAGGTGAAAGGAGATTTGACGACAATGCTAGAGCATTTATTGAAGAGGAAGCTGAGGTTTCTTCGGATGCTACCATATCTGGGGATGAAGAAGATGACGTGATTAAGAGCTCGTTCGACAGTTTCATAGATGATAGGGTTAGTGCTAGTGCCACGAGTACTCAAGATGAAACAGGCAGACTTGATATGATGGCAATTTACAGACGTTCTTTGCTAAGTCAATCACCATTCAGGAGGCTGACTTCACCCCTCGCGACCCAGGTAACTGAAAGTGAAACTTCTGGCAAGACATTGAATGTTTTCCAGGCAATTCTAACAGGAAATGTCAATCAATCTCAGACAATGCATTCAGAACATGTCAAAATGAACCGTATCCCAGAAGTTGTAATTTCTACAACTGGTGGCAGCCCAAGAGTGACAGAAGTAGAAAGCAGGACTCGAAATTTGACATTTTGTGCATCAGAATCTGTTCCTAAACTTAATTTGGATAAACGGTTTGAGTTAGTGGTGGCAGGAAGAGAATCGATGAGCGATGTGGATGCAAATGGAAATGTGTTCGATGATGATGATGAGTTTTATGAAGGTCTAGACCTTGATGCAGTCGAGGCCCAGGCAAAATTGCTCCTTGAAAAGAAAGTTGAGTTGCCTCAGATAATGGTTACTCAGCAACAGAAGAATTTTGATCTTGACACTTCTCCATCTTTTGATCTTGGGATATGACTACTTTTTATGTGCATGACTTGTTCAAATACTTAAATTGCGGGAAAAATAATCAGGAAAGCTTGGTATTTGTTTTCCCAGTAGGACACTCTCTCTAGTCTCTCCGCCTTATTTTCTTCGTGATCAGTAGATATCAAGTTGCTCAAATACTTAAGTTATGACTGTGGTTGGGTGGGGAGTACGAAAAAAACAAATATATATGTATATATTGTACAGAAATTATTGAAATAAGAGCTTCAGTTTTGTTACTG

Coding sequence (CDS)

ATGAGAAAGCAAACAGTCAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGACTAAATAGCTTCAACTTTCATCCTAGCCCAAGAATGATTCCCCATACTATCAAACCAGAAGTCCAGTTTGTTAAGCTATCAATCATACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATCCTGTTCAGATAACATCATTTAAGAACAAGCTAACCGACACTGAGACTGAGTTACTTCTCAAGTATTTCCATCCTCATGAAGATGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACATTTCCCTCGAGGACCCATGCAATAATTCATTCAAGTAGAACAATGGTTCTAATTGACACAATGCAACACTTGCAAGGACTGCACTTTTCTAGAGATTCTGAAGCCTTCTCTGTTGAGGAGAAATCATGCATTAGAGAAATATTTGAAGCATGCCAGGTTGAACAATGTTACGGGGAGAAAAGAGGTTCAATTAATGAAGTCAGCGCTTCAAAAGCAGAATTAGAAGGACCATTAGTCTATCCTGAAGTCTCAGCACCTCCAAATCCTGCGGAAGATAATTGTGTTTCTGATTACTGTTCTCCGAAGCATCCTACAAACATAGACCTCTTTGGTTCTGATTTTGTATCTGTTGGTGCCATGGGAAAGGACCAAATATCACGTTCCCCTGTGTTCTCTTCAAAAAATTTCTTGCATCCCTATTCTATTGCTGCAGGCAGTAAAATATTCTTGAGTTCTTCTGAGCTAGGTTCTTGCTGTGTAAGAACTGTTCAGGATTTGAAGACTGAAGCTGCCAATGAACCAACAACTTCTCAAACAAAATTCTTACAGGATGAGGTTCTACCAAGCCCTGAAACAGGTGATGTAACTGTCTTGGAAGACAAAGCAATGAATCAGATTGAGAAAATTCATCAAAGCACAACCGTGAAGAGAACTTTTTTTCATAAAGGAGATAATGCTGGTGAAAAGCCTGTTGTTTTAGAGATTAAGACACAATTACCCCCAGCTGGTGAATGCAGTATAATCGAGACTCAGCTTAGTCCTCGTCTCACTAATCTAATCGAAAGTGGTTTTGTTCCAGATTCACCCATTGATGATTGTGGATATACTAGACAAAGGATATATGAATCCACAATATCACAGTTTACCTTGCCTGTCCAAACGGATGTTGAACAGATTTTAAAATCTTCAAGTCCTGGGATAAGCGAAAGAATTAATTGCAATGAGGGATCCCGTGCTGGAAATGACGTTTCTCTCTCTAGTGGTGACGTTCGTCCGTCTGTACTCGAGGAGATTGATAGTGTGGGTATAAAATCACGTGCCTCTGGTTCTCCTGCATTTGATGAAACACGAACTCCCTTGGCCATTATTACAAGCAGTTGTGATACTGAAGATTGGCATTTAGTTACTGGAGAAAAGTCCAGCAGTGTAAAGAAGCCCTGCAAATTTAAAAGGTTGCGGAAGGTTGGAGACGTGGAGAAAAATGAGAACATGGAAATCATGGAAAAAACTTCAGTTTCAACACTGGCAAATATAGTCAAAACTTTTTCTAGCACCAGACAGATGAAAAAAAAGAAACGGGATGGTATTTTCTCTTATAGTTCAATTTTTGGAGAGTCCTTGTCATTGCCAAATATTGTCGAGGATCTAATAGAGCATACTTTAAAAAAAAGTAACTTTGACCTAGTTGCTAATTGTCAATATCAATTGCTTTATATAGGTGAAAGGAGATTTGACGACAATGCTAGAGCATTTATTGAAGAGGAAGCTGAGGTTTCTTCGGATGCTACCATATCTGGGGATGAAGAAGATGACGTGATTAAGAGCTCGTTCGACAGTTTCATAGATGATAGGGTTAGTGCTAGTGCCACGAGTACTCAAGATGAAACAGGCAGACTTGATATGATGGCAATTTACAGACGTTCTTTGCTAAGTCAATCACCATTCAGGAGGCTGACTTCACCCCTCGCGACCCAGGTAACTGAAAGTGAAACTTCTGGCAAGACATTGAATGTTTTCCAGGCAATTCTAACAGGAAATGTCAATCAATCTCAGACAATGCATTCAGAACATGTCAAAATGAACCGTATCCCAGAAGTTGTAATTTCTACAACTGGTGGCAGCCCAAGAGTGACAGAAGTAGAAAGCAGGACTCGAAATTTGACATTTTGTGCATCAGAATCTGTTCCTAAACTTAATTTGGATAAACGGTTTGAGTTAGTGGTGGCAGGAAGAGAATCGATGAGCGATGTGGATGCAAATGGAAATGTGTTCGATGATGATGATGAGTTTTATGAAGGTCTAGACCTTGATGCAGTCGAGGCCCAGGCAAAATTGCTCCTTGAAAAGAAAGTTGAGTTGCCTCAGATAATGGTTACTCAGCAACAGAAGAATTTTGATCTTGACACTTCTCCATCTTTTGATCTTGGGATATGA

Protein sequence

MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDHPVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLIDTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSIAAGSKIFLSSSELGSCCVRTVQDLKTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGIFSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEEAEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPFRRLTSPLATQVTESETSGKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGSPRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGLDLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI

Homology

[Close]

BLAST of Lcy09g000090 vs. ExPASy Swiss-Prot
Match: I3XHK1 (DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.0e-80
Identity = 265/849 (31.21%), Postives = 403/849 (47.47%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQ   ++IKKHM+NGG NSFNFHPSPRMIPH  KPEVQ V+ SI QFV  GKK+++++
Sbjct: 592  MRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEY 651

Query: 61   PVQITSFKNKLTDTETELLLKYF-HPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVL 120
              +  +F+ KLT  ET +L KY+ +P E+  R SLIAFPHFQT PS+ H ++HS +T +L
Sbjct: 652  ATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGML 711

Query: 121  IDTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRG--SINEVSASKAELE 180
            ID MQHLQ   FS  S++F  E ++ + E  E     +   + +   S+ ++  + ++ +
Sbjct: 712  IDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDPKDLHSVRDLEVNTSQRK 771

Query: 181  GPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKN 240
                  +V +P +  E     DY     PT+  LF S+  SV  +G   +   P+    N
Sbjct: 772  A----KQVESPTSTLE-TTEKDY-EESSPTHRYLFSSECASVDTLGNVFVMPVPLLFFPN 831

Query: 241  FLHPYSIAAGSKIFLSSSELGSCCVRTVQDLKTEAANEPTTSQTKFLQDEVLPSPETGDV 300
             L            L  +E    C  T     +     P  +  K  QD +         
Sbjct: 832  VLE------SDNTPLPKTEKQHSCRNT-----SHIDLVPVDTSEKHRQDNI--------S 891

Query: 301  TVLEDKAM--NQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLS 360
              L+++       E +   + VKR         GE  V   +   +  + E      +LS
Sbjct: 892  CKLKERFSPDGASETLETHSLVKR----NSTRVGEDDVANSVGEIVLSSDEDDCEGLELS 951

Query: 361  PRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINC 420
            PRLTN I+SG VP+SP+ D G    R  +    Q + P++   E   +SS P    +  C
Sbjct: 952  PRLTNFIKSGIVPESPVYDQG-EANREEDLEFPQLSSPMRFSNELAGESSFPERKVQHKC 1011

Query: 421  NEGSRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAII--TSSCDTED 480
            N+ +       L +      +    + + +      SP  ++ RTPLA +  T+S   +D
Sbjct: 1012 NDYNIVSTTTELRTPQKEVGLANGTECLAV------SPIPEDWRTPLANLTNTNSSARKD 1071

Query: 481  WHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKK 540
            W + +GEK  ++++P K KRLR++GD     +  + E     T A+ +++ S  ++  + 
Sbjct: 1072 WRVSSGEKLETLRQPRKLKRLRRLGDC----SSAVKENYPGITEADHIRSRSRGKKHIRG 1131

Query: 541  KRDGIFSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAF 600
            K+  I                                                DD+ + F
Sbjct: 1132 KKKMI-----------------------------------------------MDDDVQVF 1191

Query: 601  IEEEAEVSSDATISGDEEDDVIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIYRRSLL 660
            I+EEAEVSS A +S DE +DV   SF DSFIDD    +A +TQ E+G++DMMA+YRRSLL
Sbjct: 1192 IDEEAEVSSGAEMSADENEDVTGDSFEDSFIDDGTMPTA-NTQAESGKVDMMAVYRRSLL 1251

Query: 661  SQSPFRRLTSPLATQVTESETSGKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVIST 720
            SQSP       LA           +L+ + A     +N+S++   + +   R P+   S 
Sbjct: 1252 SQSPLPARFRDLA---------ASSLSPYSAGPLTRINESRSDSDKSLSSLRTPKTTNSE 1311

Query: 721  TG------GSPRVTEV--ESRTRNLTFCASESVPKLNLDKRF--ELVVAGRESMSDVDAN 780
            +       G+  V ++  +SR R  + C S + P +NL+ +F        +ES   V +N
Sbjct: 1312 SNQDAMMIGNLSVVQISSDSRKRKFSLCNSANAPVINLESKFAAHAQATEKESHEGVRSN 1343

Query: 781  GNVF----DDDDEFYEGLDLDAVEAQAKLLLEK-------KVELPQIMVTQQQKNFDLD- 820
                    DDDD F+  LD DA+EAQA LLL K       K +   I     Q++  ++ 
Sbjct: 1372 AGALEYNDDDDDAFFATLDFDAMEAQATLLLSKQRSEAKEKEDATVIPNPGMQRSDGMEK 1343

[Close]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL
Match: A0A6J1FGG7 (DEAD-box ATP-dependent RNA helicase FANCM isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 525  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 584

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 585  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 644

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 645  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 704

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 705  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 764

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 765  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 824

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 825  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 884

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 885  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 944

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 945  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 1004

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 1005 GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 1064

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 1065 FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 1124

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 1125 AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1184

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1185 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1244

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1245 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1304

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1305 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1335

[Close]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL
Match: A0A6J1FLC0 (DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 493  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 552

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 553  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 612

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 613  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 672

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 673  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 732

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 733  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 792

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 793  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 852

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 853  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 912

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 913  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 972

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 973  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 1032

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 1033 FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 1092

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 1093 AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1152

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1153 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1212

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1213 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1272

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1273 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1303

[Close]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL
Match: A0A6J1FGU4 (DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 399  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 458

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 459  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 518

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 519  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 578

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 579  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 638

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 639  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 698

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 699  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 758

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 759  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 818

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 819  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 878

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 879  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 938

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 939  FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 998

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 999  AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1058

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1059 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1118

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1119 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1178

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1179 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1209

[Close]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL
Match: A0A6J1FGT9 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 605  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 664

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 665  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 724

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 725  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 784

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 785  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 844

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 845  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 904

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 905  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 964

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 965  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 1024

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 1025 SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 1084

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 1085 GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 1144

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 1145 FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 1204

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 1205 AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1264

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1265 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1324

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1325 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1384

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1385 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1415

[Close]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL
Match: A0A6J1FMD9 (DEAD-box ATP-dependent RNA helicase FANCM isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 366  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 425

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 426  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 485

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 486  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 545

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 546  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 605

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 606  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 665

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 666  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 725

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 726  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 785

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 786  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 845

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 846  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 905

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 906  FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 965

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 966  AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1025

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1026 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1085

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1086 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1145

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1146 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1176

[Close]

BLAST of Lcy09g000090 vs. NCBI nr
Match: XP_022939322.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucurbita moschata])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 525  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 584

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 585  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 644

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 645  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 704

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 705  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 764

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 765  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 824

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 825  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 884

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 885  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 944

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 945  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 1004

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 1005 GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 1064

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 1065 FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 1124

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 1125 AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1184

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1185 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1244

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1245 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1304

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1305 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1335

[Close]

BLAST of Lcy09g000090 vs. NCBI nr
Match: XP_022939326.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Cucurbita moschata])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 320  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 379

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 380  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 439

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 440  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 499

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 500  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 559

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 560  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 619

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 620  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 679

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 680  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 739

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 740  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 799

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 800  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 859

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 860  FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 919

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 920  AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 979

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 980  GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1039

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1040 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1099

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1100 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1130

[Close]

BLAST of Lcy09g000090 vs. NCBI nr
Match: XP_022939323.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucurbita moschata])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 493  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 552

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 553  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 612

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 613  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 672

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 673  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 732

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 733  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 792

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 793  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 852

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 853  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 912

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 913  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 972

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 973  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 1032

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 1033 FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 1092

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 1093 AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1152

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1153 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1212

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1213 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1272

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1273 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1303

[Close]

BLAST of Lcy09g000090 vs. NCBI nr
Match: XP_022939324.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucurbita moschata])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 399  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 458

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 459  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 518

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 519  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 578

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 579  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 638

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 639  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 698

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 699  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 758

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 759  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 818

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 819  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 878

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 879  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 938

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 939  FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 998

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 999  AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1058

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1059 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1118

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1119 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1178

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1179 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1209

[Close]

BLAST of Lcy09g000090 vs. NCBI nr
Match: XP_022939325.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Cucurbita moschata])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 661/823 (80.32%), Postives = 716/823 (87.00%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQT SKSIKKHMQNGG+NSFNFH SPRMIPHTIKPEVQFVKLSI QFVRPGKKVKD+H
Sbjct: 366  MRKQTTSKSIKKHMQNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDEH 425

Query: 61   PVQITSFKNKLTDTETELLLKYFHPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVLI 120
             VQITSFKNKLT+TETELLLKYFHP EDAW+PS+IAFPHFQTFPSRTH + HSSRTM+LI
Sbjct: 426  AVQITSFKNKLTNTETELLLKYFHPCEDAWKPSIIAFPHFQTFPSRTHGVRHSSRTMILI 485

Query: 121  DTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRGSINEVSASKAELEGPL 180
            DTMQHLQGL+FSRDSEAFSV+EK CIRE+FEA Q+ +CYG KRGSINEVSA K ELEGP+
Sbjct: 486  DTMQHLQGLYFSRDSEAFSVQEKPCIRELFEASQIGKCYGGKRGSINEVSAPKTELEGPI 545

Query: 181  VYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLH 240
            VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH
Sbjct: 546  VYPEVSAPPNPTENNCSSVYCSLKHPSNI---GSGFVSVDAMGEDQISRFPVFSSKEILH 605

Query: 241  PYSIAAGSKIFLSSSELGSCCVRTVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVT 300
              S+ A SKI LSS ELGS  VRT QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D T
Sbjct: 606  SNSVDACSKILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDAT 665

Query: 301  VLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLSPRL 360
            VLEDKA+NQIEKIHQST +KRTFF++GDN  EKPVVLEI+ Q PPA ECSIIETQLSPRL
Sbjct: 666  VLEDKAVNQIEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRL 725

Query: 361  TNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEG 420
            TNLIESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEG
Sbjct: 726  TNLIESGFVPDSPIDECGYSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEG 785

Query: 421  SRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAIITSSCDTEDWHLVT 480
            S AGNDV L+SG+ RPSVLE+ DSVG+KS    SP  +ET+TP AII SSCD EDW+LV+
Sbjct: 786  SHAGNDVFLASGEDRPSVLEDNDSVGVKSHGFTSPVAEETQTPFAIIASSCDNEDWNLVS 845

Query: 481  GEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGI 540
            GEKSSSV+KP KFKRLRKVGDVEKNEN E  EKTSVS LAN+V TFSS+R +KKKKRDGI
Sbjct: 846  GEKSSSVQKPRKFKRLRKVGDVEKNENTESAEKTSVSPLANMVGTFSSSRHIKKKKRDGI 905

Query: 541  -FSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNARAFIEEE 600
             FS+SSIFG SLS+ NI EDLIEHT K+S  D VA CQYQLL++GERRF+DN RA+IEEE
Sbjct: 906  FFSHSSIFGISLSVLNISEDLIEHTFKQSKSDQVATCQYQLLHLGERRFEDNVRAYIEEE 965

Query: 601  AEVSSDATISGDEEDDVIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYRRSLLSQSPF 660
            AEVSSDATISGDEEDD+IKSSFDSFIDDRVSASATSTQDETG  DMMAIYRRSLLSQSPF
Sbjct: 966  AEVSSDATISGDEEDDMIKSSFDSFIDDRVSASATSTQDETGGHDMMAIYRRSLLSQSPF 1025

Query: 661  RRLTSPLATQVTESETS-GKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTGGS 720
             RLTSP AT+VTESETS  KTLNVFQ  LTGNVNQS TMHSEHVKM R PEVVISTTGG 
Sbjct: 1026 GRLTSPHATRVTESETSPDKTLNVFQTTLTGNVNQSHTMHSEHVKMKRSPEVVISTTGGC 1085

Query: 721  PRVTEVESRTRNLTFCASESVPKLNLDKRFELVVAGRESMSDVDANGNVFDDDDEFYEGL 780
            P  TEVESR RNLTFCASESVPKLNLD++FELVVAGRES+SDV         DDEFYEGL
Sbjct: 1086 PSATEVESRNRNLTFCASESVPKLNLDRQFELVVAGRESISDV---------DDEFYEGL 1145

Query: 781  DLDAVEAQAKLLLEKKVELPQIMVTQQQKNFDLDTSPSFDLGI 820
            DLDAVEAQAKLLLEKKVELPQ+MVTQ  KN DL TSPSFDLGI
Sbjct: 1146 DLDAVEAQAKLLLEKKVELPQMMVTQPHKNLDLHTSPSFDLGI 1176

[Close]

BLAST of Lcy09g000090 vs. TAIR 10
Match: AT1G35530.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-79
Identity = 271/878 (30.87%), Postives = 414/878 (47.15%), Query Frame = 0


Query: 1    MRKQTVSKSIKKHMQNGGLNSFNFHPSPRMIPHTIKPEVQFVKLSIIQFVRPGKKVKDDH 60
            MRKQ   ++IKKHM+NGG NSFNFHPSPRMIPH  KPEVQ V+ SI QFV  GKK+++++
Sbjct: 591  MRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEY 650

Query: 61   PVQITSFKNKLTDTETELLLKYF-HPHEDAWRPSLIAFPHFQTFPSRTHAIIHSSRTMVL 120
              +  +F+ KLT  ET +L KY+ +P E+  R SLIAFPHFQT PS+ H ++HS +T +L
Sbjct: 651  ATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGML 710

Query: 121  IDTMQHLQGLHFSRDSEAFSVEEKSCIREIFEACQVEQCYGEKRG--SINEVSASKAELE 180
            ID MQHLQ   FS  S++F  E ++ + E  E     +   + +   S+ ++  + ++ +
Sbjct: 711  IDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDPKDLHSVRDLEVNTSQRK 770

Query: 181  GPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKN 240
                  +V +P +  E     DY     PT+  LF S+  SV  +G   +   P+    N
Sbjct: 771  A----KQVESPTSTLE-TTEKDY-EESSPTHRYLFSSECASVDTLGNVFVMPVPLLFFPN 830

Query: 241  FLHPYSIAAGSKIFLSSSELGSCCVRTVQDLKTEAANEPTTSQTKFLQDEVLPSPETGDV 300
             L            L  +E    C  T     +     P  +  K  QD +         
Sbjct: 831  VLE------SDNTPLPKTEKQHSCRNT-----SHIDLVPVDTSEKHRQDNI--------S 890

Query: 301  TVLEDKAM--NQIEKIHQSTTVKRTFFHKGDNAGEKPVVLEIKTQLPPAGECSIIETQLS 360
              L+++       E +   + VKR         GE  V   +   +  + E      +LS
Sbjct: 891  CKLKERFSPDGASETLETHSLVKR----NSTRVGEDDVANSVGEIVLSSDEDDCEGLELS 950

Query: 361  PRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINC 420
            PRLTN I+SG VP+SP+ D G    R  +    Q + P++   E   +SS P    +  C
Sbjct: 951  PRLTNFIKSGIVPESPVYDQG-EANREEDLEFPQLSSPMRFSNELAGESSFPERKVQHKC 1010

Query: 421  NEGSRAGNDVSLSSGDVRPSVLEEIDSVGIKSRASGSPAFDETRTPLAII--TSSCDTED 480
            N+ +       L +      +    + + +      SP  ++ RTPLA +  T+S   +D
Sbjct: 1011 NDYNIVSTTTELRTPQKEVGLANGTECLAV------SPIPEDWRTPLANLTNTNSSARKD 1070

Query: 481  WHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMEIMEKTSVSTLANIVKTFSSTR---QM 540
            W + +GEK  ++++P K KRLR++GD     +  + E     T A+ +++ S  +   ++
Sbjct: 1071 WRVSSGEKLETLRQPRKLKRLRRLGDC----SSAVKENYPGITEADHIRSRSRGKKHIRV 1130

Query: 541  KKKKRDGIFSYSSIFGESLSLPNIVEDLIEHTLKKSNFDLVANCQYQLLYIGERRFDDNA 600
            K K  +  F+ SS+                       F LV   +  ++       DD+ 
Sbjct: 1131 KWKSAESWFTLSSV----------------------AFALVTKKKKMIM-------DDDV 1190

Query: 601  RAFIEEEAEVSSDATISGDEEDDVIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIY-- 660
            + FI+EEAEVSS A +S DE +DV   SF DSFIDD    +A +TQ E+G++DMMA+Y  
Sbjct: 1191 QVFIDEEAEVSSGAEMSADENEDVTGDSFEDSFIDDGTMPTA-NTQAESGKVDMMAVYRY 1250

Query: 661  ------------------------RRSLLSQSPFRRLTSPLATQVTESETSGKTLNVFQA 720
                                    RRSLLSQSP       LA           +L+ + A
Sbjct: 1251 IQPKISFFYCEVNELIKNHKVSFHRRSLLSQSPLPARFRDLA---------ASSLSPYSA 1310

Query: 721  ILTGNVNQSQTMHSEHVKMNRIPEVVISTTG------GSPRVTEV--ESRTRNLTFCASE 780
                 +N+S++   + +   R P+   S +       G+  V ++  +SR R  + C S 
Sbjct: 1311 GPLTRINESRSDSDKSLSSLRTPKTTNSESNQDAMMIGNLSVVQISSDSRKRKFSLCNSA 1370

Query: 781  SVPKLNLDKRF--ELVVAGRESMSDVDANGNVF----DDDDEFYEGLDLDAVEAQAKLLL 820
            + P +NL+ +F        +ES   V +N        DDDD F+  LD DA+EAQA LLL
Sbjct: 1371 NAPVINLESKFAAHAQATEKESHEGVRSNAGALEYNDDDDDAFFATLDFDAMEAQATLLL 1389

[Close]

BLAST of Lcy09g000090 vs. TAIR 10
Match: AT1G35530.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 236.9 bits (603), Expect = 5.8e-62
Identity = 242/845 (28.64%), Postives = 377/845 (44.62%), Query Frame = 0


Query: 31   IPHTIKPEVQFVKLSIIQFVRPGKKVKDDHPVQITSFKNKLTDTETELLLKYF-HPHEDA 90
            IPH  KPEVQ V+ SI QFV  GKK+++++  +  +F+ KLT  ET +L KY+ +P E+ 
Sbjct: 576  IPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEK 635

Query: 91   WRPSLIAFPHFQTFPSRTHAIIHSSRTMVLIDTMQHLQGLHFSRDSEAFSVEEKSCIREI 150
             R SLIAFPHFQT PS+ H ++HS +T +LID MQHLQ   FS  S++F  E ++ + E 
Sbjct: 636  LRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHLQEPTFSEQSKSFFTEFRAPLGER 695

Query: 151  FEACQVEQCYGEKRG--SINEVSASKAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPT 210
             E     +   + +   S+ ++  + ++ +      +V +P +  E     DY     PT
Sbjct: 696  EELDTGLRVTNDPKDLHSVRDLEVNTSQRKA----KQVESPTSTLE-TTEKDY-EESSPT 755

Query: 211  NIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSIAAGSKIFLSSSELGSCCVRTVQD 270
            +  LF S+  SV  +G   +   P+    N L            L  +E    C  T   
Sbjct: 756  HRYLFSSECASVDTLGNVFVMPVPLLFFPNVLE------SDNTPLPKTEKQHSCRNT--- 815

Query: 271  LKTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAM--NQIEKIHQSTTVKRTFFHKG 330
              +     P  +  K  QD +           L+++       E +   + VKR      
Sbjct: 816  --SHIDLVPVDTSEKHRQDNI--------SCKLKERFSPDGASETLETHSLVKR----NS 875

Query: 331  DNAGEKPVVLEIKTQLPPAGECSIIETQLSPRLTNLIESGFVPDSPIDDCGYTRQRIYES 390
               GE  V   +   +  + E      +LSPRLTN I+SG VP+SP+ D G    R  + 
Sbjct: 876  TRVGEDDVANSVGEIVLSSDEDDCEGLELSPRLTNFIKSGIVPESPVYDQG-EANREEDL 935

Query: 391  TISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGDVRPSVLEEIDSVGI 450
               Q + P++   E   +SS P    +  CN+ +       L +      +    + + +
Sbjct: 936  EFPQLSSPMRFSNELAGESSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTECLAV 995

Query: 451  KSRASGSPAFDETRTPLAII--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKN 510
                  SP  ++ RTPLA +  T+S   +DW + +GEK  ++++P K KRLR++GD    
Sbjct: 996  ------SPIPEDWRTPLANLTNTNSSARKDWRVSSGEKLETLRQPRKLKRLRRLGDC--- 1055

Query: 511  ENMEIMEKTSVSTLANIVKTFSSTRQMKKKKRDGIFSYSSIFGESLSLPNIVEDLIEHTL 570
             +  + E     T A+ +++ S  ++  + K+  I                         
Sbjct: 1056 -SSAVKENYPGITEADHIRSRSRGKKHIRGKKKMI------------------------- 1115

Query: 571  KKSNFDLVANCQYQLLYIGERRFDDNARAFIEEEAEVSSDATISGDEEDDVIKSSF-DSF 630
                                   DD+ + FI+EEAEVSS A +S DE +DV   SF DSF
Sbjct: 1116 ----------------------MDDDVQVFIDEEAEVSSGAEMSADENEDVTGDSFEDSF 1175

Query: 631  IDDRVSASATSTQDETGRLDMMAIY--------------------------RRSLLSQSP 690
            IDD    +A +TQ E+G++DMMA+Y                          RRSLLSQSP
Sbjct: 1176 IDDGTMPTA-NTQAESGKVDMMAVYRYIQPKISFFYCEVNELIKNHKVSFHRRSLLSQSP 1235

Query: 691  FRRLTSPLATQVTESETSGKTLNVFQAILTGNVNQSQTMHSEHVKMNRIPEVVISTTG-- 750
                   LA           +L+ + A     +N+S++   + +   R P+   S +   
Sbjct: 1236 LPARFRDLA---------ASSLSPYSAGPLTRINESRSDSDKSLSSLRTPKTTNSESNQD 1295

Query: 751  ----GSPRVTEV--ESRTRNLTFCASESVPKLNLDKRF--ELVVAGRESMSDVDANGNVF 810
                G+  V ++  +SR R  + C S + P +NL+ +F        +ES   V +N    
Sbjct: 1296 AMMIGNLSVVQISSDSRKRKFSLCNSANAPVINLESKFAAHAQATEKESHEGVRSNAGAL 1323

Query: 811  ----DDDDEFYEGLDLDAVEAQAKLLLEK-------KVELPQIMVTQQQKNFDLD-TSPS 820
                DDDD F+  LD DA+EAQA LLL K       K +   I     Q++  ++  +PS
Sbjct: 1356 EYNDDDDDAFFATLDFDAMEAQATLLLSKQRSEAKEKEDATVIPNPGMQRSDGMEKDAPS 1323

The following BLAST results are available for this feature:

BLAST of Lcy09g000090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I3XHK1	6.0e-80	31.21	DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FAN...	[more]

BLAST of Lcy09g000090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGG7	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X4 OS=Cucurbita moschata OX=36...	[more]
A0A6J1FLC0	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita moschata OX=36...	[more]
A0A6J1FGU4	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita moschata OX=36...	[more]
A0A6J1FGT9	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1FMD9	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X7 OS=Cucurbita moschata OX=36...	[more]

BLAST of Lcy09g000090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939322.1	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucurbita moschata]	[more]
XP_022939326.1	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Cucurbita moschata]	[more]
XP_022939323.1	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucurbita moschata]	[more]
XP_022939324.1	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucurbita moschata]	[more]
XP_022939325.1	0.0e+00	80.32	DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Cucurbita moschata]	[more]

BLAST of Lcy09g000090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35530.2	1.4e-79	30.87	DEAD/DEAH box RNA helicase family protein	[more]
AT1G35530.1	5.8e-62	28.64	DEAD/DEAH box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR14025	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	coord: 1..796
IPR039686	FANCM/Mph1-like	PANTHER	PTHR14025:SF20	FANCONI ANEMIA GROUP M PROTEIN	coord: 1..796

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000090.1	Lcy09g000090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006281	DNA repair
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016787	hydrolase activity