Lcy08g016690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g016690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr08: 47360916 .. 47365367 (+)
RNA-Seq Expression	Lcy08g016690
Synteny	Lcy08g016690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGCCAAGGTTCCCGCCAAAAGCATCAAGAAATTCCTCCAATGGGGTTTATCATGTTTTGTTCATAATCACAGATTCGTTCAGATTCTCGATAAGATTTTCCAATTTTCCCATTCGATCGGATCAAATCGCTCCACCGCCGAGTGAAGTTTGCTAGTTGCGAAACGGATCGATCGAACATGGAGAAGGACAACGCCGCCGTCGCAGCTCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGCGATTGCCCCTCCTCCGCTCCAAATCCCAATTCCACTTCCAATTCTTCCAGACTTCCTTCCTCTTCTGCCCATACTGCTGCTCCTGCTGCCCCTTCAAAAGCTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCTGATCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTACCGCGGCCGCGGACACGAGGTTATCTTTGCTTTTACTTGGACCATAAATTTATCCATCCGATTCCATTCCAATCCTTGCGACCATCGTGTATTATAGTTGATTGGTATCATCTGTCAACATTTGTGTTTACTTTTATCTGGTGTATTTGAGTTTTATTTGAAATATCTCAACATTGCTGCTCCAGGACGAAGAGGGTTTTGGAAAACAAATACTAATTTTCAGGTTCTTGCGTGCTTTCGAGTAATCTTAGTTATGAATGTGGCTAGTGTAGGAAATTATGCGGTAGTTTTTGTTAGTAGAGGCTTTAGGTTTTTGTATTGATGTGTGATTAGAAACAATTTTGATTGTGAAAAAAAGATTTCTTTTGAAGGTTTGTTTCAGAGAGGCCAGGTTCCAGCAGTGGCAATCGTATTTTACCTTAATAGTTTGTTTATTGGGCGCTATTTATTGGATTACCGGTGTGCAAACAGTCTTCCACTGATTTATAAATATGTCTGTTTTCATCAAGGCCATGTAGATGTATATTTGTTTTACCGTGTCATCCTCTCATATATTATCATTTTCTGATGGGTTGATTCTTGCACTAATTGAATTATACTTTTGATGGTGGTTTTGTAGGTCAGTGATTTGGAAAACTTCATTGGCTTGTACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGGTAAATATGTGCATGAACCTTGACTTTTTATGCTCTTTTACCATGAAGATATCACAGGGGTGTACTTATATGGCTGGCTGGATTGGTATGTGTGTCAAACTACAGAAGTTTTGCCTAATAACGCATGAACATAGTTAGCATCTGAGTTAAAGGCACGGCTCTTAAGAAACCCATTGCATTGAAAGAGACATAGAGTGCATTGTATCATGGTGGCATGCTGGATGCACTCTTAACTCTGTAATATTTTAACTTCATCCTTGTTTATTGAATCAAATCAACGTGAGCAAATTTGTTTACCATTTGATATCTAGTTTGCAATGAATTAGCATTCTTTCTAAAAGGACATTTTGATCAGATGTGTCTTGGGGAACTAAGAGAGAGAGTTGCCAAGGGAGGGGACCCTACAAAGTGGCGCGAGTCACCCATTGTAAATGATGATGATATCAATAATGAAAAAGGTAATTTTTAGTATTCTCATTCATTAAAAGTCACTCATATCATTATTTTCATCAGCTGTTTGATCTTGATAGAATGTATGATATCAAGTTTTATTGTGTTTTTGTTAGATGAGTATTGTCCTCTAGGGTGGAGTTTGAATTCTTCCCAAGTGCTATGATTATGTAACTTTTAACTCTATTTAAAAATTTCAAATTTGATTTAGATGATAAATTTGAAGTAAACTGAATAAAAAGGAAAAAAATGGCTCAAATTGATCACGATGCATTAGTTTATTTGCGTTAGATTTTAATTTCTAGAGTAAGGTTTTTCTTTTTTGTAATTTCTCTAGAAGTAGCCATGTCTATAGCTATGAAAATTTTAGATTTTAAGGAGATCAATAGATATAAACATTGAACAACACTAATGAAAGATATGCTTGAACTGGCATTGGTTTTTTTATGTCCCCTCTAGACAGAGTTCCTTGAAAACTTCGAAATACTGCTCACTGAAATTGTCAACTTCAGCTTCTCAAAAAAAAAAAAAAAGTTTTGTCATCTTCAAATTTACGTTGGAGGAACAATGTTTGGCTATGGCTCAATCCATCTGAGTGATTCAATGGGCTGATTGGGATCAGTAAGCTTAATTTTGTCCAATGATGGAAAACACAACGTCTATTGAGCAGTTGTACGTGGCCTTTGTTTGTCATTTGCCATTACTGACCTTCACCTTCCATCAATTCACCACCTCCATCACCTTCTCATCTTTCTTTTTTTCACACAAATTCATATGCTGTTGGCAAGGGCTTTTGATGAACGCCATTTGCTTTAAGTCATGTATCATTTAATTTGAGCTTATGAGATTTGAGGGCTTTGTTGTATACACCTTTGCCAAAGGGAGCTTAGTTCTAAATATTTTCTCTACTCTTTGGCCTCTGGATGCCCAGTTTGGTTTGCACTAATCAGTCTGGACTCTGGGCTTAGGATGGCTATATTGTATCAAAATTTGGGTAGTCGTTGTGTTGCCATTTTCATTCTTTATATTTTGGTTTATCTTTTATTTTTTAATGGTTCATTAGTTGTGTCATGGCATGTTGTTTGCATTCGGCTCTGTGTAGTGTGTAGTTGGAAACGCAACCTTGAAAGTTCAATCCATCCATTTGAGTGTTTTTCTTTTTAATGTTCGGAACTATACTCTGATTGGAGAAGAATTTCAGATTCTATAACCAATCATTATTTGAGTACCCCTTTTCTCGAACTTCAAACCCATCTGTCAATGCTTGCAGAAGCCAAAGACCCAGAGGACTTATTCGATAATCAGGAAGAGGCTTCTTTGAGGAATAATGGTGCTGATGACATTGAAGATGACATGCTTCAGGAAGTTTATGAGAAAGCTACTGAAGTAAGTATTTCTCTGTTCCTCTTTTTTTTTTTTTTGAACGCTTGGTTGCTTTCCATCCCTTCAATCGAATTAGTTTGAATCATACAATTTCTTTTGAGGAAACCCTTCCAATTATTGAATTGAATGAGGGAATTTTATCTTGAATCGTTAATGTAGATTTCAGGAATAGTCCTAATGAAGCAAACTATGTTTTCAGTCCATAATTTGACAGATCAATTTTCCAGATGATGATTTTTTAAAATCTAGATGTTAATGCCCCACTTAGTTATAATTTGCACTAAAATTTTGTTTATTAGGTGAGCACTTTTTAATTATTGCACAAGTTAATGTATCTTCATATTTGGTCATAGAATAGACATTTAATGACAAGAAAAGAAAATGCTGTTCAAGTAACTGTCTACATGGTAGAAGATGAAGGTCTATGTTTTTGGGAAATGATAATTAACGAAAAATTTGGTGTCTCTAGGTTCAAAGTACTTTCTTAACTACAATTAAAAGTCTTATATATGCTATGAATAGGTTTTTAGATAAAAAATCCATATCAATCACTCGTATACTGGTGCCATTAAATCGAACCTTCCACTTGATGAGAAACTTCAAGCATAAACACCTCCATCCTCATTCTCTCTAACTCGAGTCTGTTGATATCTAGCACGATTTCATGACATATCAACAATCTGCAACATTTAGTTACGGGTCTTTACATGATTGTAGGAACCTTTGCAGAATTTACAAAGTGATTCCCACACCAATGGTGAAACTATGGAAGGTGTTGCCCAGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAGCTCACAGAGGAACAGAGAGCTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCTCTCGTTGGCTACTGTCTGATTCACGTGCTTGCTTTGTCTAGCTTGCCTTTGATTGCAAAGGCAATAATAAAATGACATTCAAAGTGATAGTTTTTGGCTAGTGAAGGCTCAACCACATCAGGGATTTCTTCTTCAAAGCTCCAAAAGTTTTCTAAATTTGGGCAGATGAGAGGCTTTAGAGGGTCAATTAGGAACTGGTTTACTTGTTTGCGGAAGTTATAATTAATCAATAGAGCTTGCCTTGTAAATTAATCATATTTTATTGGATATTTGCGACCATATAGGTTAAGGTTGTTGCCTTGTTCGCTATTTATGTATAAGACTATTCACGGTCAAGTCACTCGACACGACATCTCATGGTTGAGAGTATTCTTTAGAATATGATTGGGATGGACTAAGGGCACGCAAAATATTTTGTTTGGGATTGTTATAACTTTTAAAATGATTATTGTTGGATGTGTTTTAGAAAACTCAATTATTATATGAAGTAAATTGATGTTTTAAAAGTA

mRNA sequence

GGCGCCAAGGTTCCCGCCAAAAGCATCAAGAAATTCCTCCAATGGGGTTTATCATGTTTTGTTCATAATCACAGATTCGTTCAGATTCTCGATAAGATTTTCCAATTTTCCCATTCGATCGGATCAAATCGCTCCACCGCCGAGTGAAGTTTGCTAGTTGCGAAACGGATCGATCGAACATGGAGAAGGACAACGCCGCCGTCGCAGCTCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGCGATTGCCCCTCCTCCGCTCCAAATCCCAATTCCACTTCCAATTCTTCCAGACTTCCTTCCTCTTCTGCCCATACTGCTGCTCCTGCTGCCCCTTCAAAAGCTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCTGATCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTACCGCGGCCGCGGACACGAGGTCAGTGATTTGGAAAACTTCATTGGCTTGTACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGTGTCTTGGGGAACTAAGAGAGAGAGTTGCCAAGGGAGGGGACCCTACAAAGTGGCGCGAGTCACCCATTGTAAATGATGATGATATCAATAATGAAAAAGAAGCCAAAGACCCAGAGGACTTATTCGATAATCAGGAAGAGGCTTCTTTGAGGAATAATGGTGCTGATGACATTGAAGATGACATGCTTCAGGAAGTTTATGAGAAAGCTACTGAAGAACCTTTGCAGAATTTACAAAGTGATTCCCACACCAATGGTGAAACTATGGAAGGTGTTGCCCAGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAGCTCACAGAGGAACAGAGAGCTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCTCTCGTTGGCTACTGTCTGATTCACGTGCTTGCTTTGTCTAGCTTGCCTTTGATTGCAAAGGCAATAATAAAATGACATTCAAAGTGATAGTTTTTGGCTAGTGAAGGCTCAACCACATCAGGGATTTCTTCTTCAAAGCTCCAAAAGTTTTCTAAATTTGGGCAGATGAGAGGCTTTAGAGGGTCAATTAGGAACTGGTTTACTTGTTTGCGGAAGTTATAATTAATCAATAGAGCTTGCCTTGTAAATTAATCATATTTTATTGGATATTTGCGACCATATAGGTTAAGGTTGTTGCCTTGTTCGCTATTTATGTATAAGACTATTCACGGTCAAGTCACTCGACACGACATCTCATGGTTGAGAGTATTCTTTAGAATATGATTGGGATGGACTAAGGGCACGCAAAATATTTTGTTTGGGATTGTTATAACTTTTAAAATGATTATTGTTGGATGTGTTTTAGAAAACTCAATTATTATATGAAGTAAATTGATGTTTTAAAAGTA

Coding sequence (CDS)

ATGGAGAAGGACAACGCCGCCGTCGCAGCTCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGCGATTGCCCCTCCTCCGCTCCAAATCCCAATTCCACTTCCAATTCTTCCAGACTTCCTTCCTCTTCTGCCCATACTGCTGCTCCTGCTGCCCCTTCAAAAGCTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCTGATCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTACCGCGGCCGCGGACACGAGGTCAGTGATTTGGAAAACTTCATTGGCTTGTACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGTGTCTTGGGGAACTAAGAGAGAGAGTTGCCAAGGGAGGGGACCCTACAAAGTGGCGCGAGTCACCCATTGTAAATGATGATGATATCAATAATGAAAAAGAAGCCAAAGACCCAGAGGACTTATTCGATAATCAGGAAGAGGCTTCTTTGAGGAATAATGGTGCTGATGACATTGAAGATGACATGCTTCAGGAAGTTTATGAGAAAGCTACTGAAGAACCTTTGCAGAATTTACAAAGTGATTCCCACACCAATGGTGAAACTATGGAAGGTGTTGCCCAGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAGCTCACAGAGGAACAGAGAGCTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCTCTCGTTGGCTACTGTCTGA

Protein sequence

MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAAEKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLATV

Homology

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BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot
Match: Q4QR88 (TIMELESS-interacting protein OS=Rattus norvegicus OX=10116 GN=Tipin PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07
Identity = 66/242 (27.27%), Postives = 92/242 (38.02%), Query Frame = 0


Query: 44  PSSSAHTAAPAAPSKAAEKPKKAP------RTRPKLTPDLLLSEDGLGYVLRHFPRAFKY 103
           P S     A A P + +  P   P      R  PKL    L SE GL   LRH     K+
Sbjct: 29  PGSPERDPAEAEPDEGSGAPVPVPPKRIVKRNIPKLDATRLTSERGLP-ALRHVFDKTKF 88

Query: 104 RGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKG 163
           +G+GHE  DL+  I     W   + P   FE F+ +VE +   K V+ CL  +R      
Sbjct: 89  KGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR------ 148

Query: 164 GDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATE 223
                  + PIV++D +NN  E ++   L            G D                
Sbjct: 149 ------LDLPIVHEDFVNNNDEVEETNSL-------DAAATGFDAF-------------- 208

Query: 224 EPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKA 280
                              V  ++     ++ +   LTEEQ+ R+E N+  ALER  AK 
Sbjct: 209 -------------------VTSSSDSKRFASEASRNLTEEQQQRIEKNKQLALERRQAKL 217

[Close]

BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot
Match: Q91WA1 (TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.2e-07
Identity = 72/242 (29.75%), Postives = 96/242 (39.67%), Query Frame = 0


Query: 44  PSSSAHTAAPAAPSKAAEK-----PKK-APRTRPKLTPDLLLSEDGLGYVLRHFPRAFKY 103
           P+S     A A P + +       PK+   R  PKL    L SE GL   LRH     K+
Sbjct: 29  PASPERDPADAEPEEGSGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKF 88

Query: 104 RGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKG 163
           +G+GHE  DL+  I     W   + P   FE F+ +VE +   K V+ CL  +R      
Sbjct: 89  KGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR------ 148

Query: 164 GDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATE 223
                  + PIV++D +NN  E  +               NG D                
Sbjct: 149 ------LDLPIVHEDFVNNNDEVGEA--------------NGPD----------VSATGF 208

Query: 224 EPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKA 280
           +P     SDS           +   EP  S      LTEEQ+ R+E N+  ALER  AK 
Sbjct: 209 DPFLTSSSDSR----------KFASEPTRS------LTEEQQQRIERNKQLALERRQAKL 217

[Close]

BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot
Match: Q3ZCC4 (TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.9e-07
Identity = 66/252 (26.19%), Postives = 102/252 (40.48%), Query Frame = 0


Query: 28  PSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAAEKPKKAPRTRPKLTPDLLLSEDGLGYV 87
           P ++P       +     S      P  P +  +      R  PKL  + L+SE GL   
Sbjct: 28  PPASPGREDGEGAEPEEESGRGAPVPVPPKRTVK------RNIPKLNAERLISERGLP-A 87

Query: 88  LRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCL 147
           LRH     K++G+GHE  DL+  I     W   + P   FE F+ +VE +   K V+ CL
Sbjct: 88  LRHVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVECLGNKKEVQTCL 147

Query: 148 GELRERVAKGGDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDM 207
             +R             + PI+++D ++N  E ++              NNG D      
Sbjct: 148 KRIR------------LDLPILHEDFVSNNDEVEE--------------NNGHD------ 207

Query: 208 LQEVYEKATEEPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRL 267
                   T   L +  ++S+ + E              ++ S   LTEE++ R+E N+ 
Sbjct: 208 -------VTATELDHFLTNSYGSVE-------------FASESSRSLTEEEQQRIERNKQ 220

Query: 268 KALERAAAKALS 280
            ALER  AK LS
Sbjct: 268 LALERRQAKLLS 220

[Close]

BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot
Match: Q5F416 (TIMELESS-interacting protein OS=Gallus gallus OX=9031 GN=TIPIN PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 70/257 (27.24%), Postives = 99/257 (38.52%), Query Frame = 0


Query: 20  PGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAAEKPKKAPRTRPKLTPDLLL 79
           PG    +   +  +P+    S    SSSA               K   R+ PKL  + L+
Sbjct: 34  PGRGDAEWAQANGDPDGNQQSETKDSSSA-------------ARKAVKRSIPKLDANRLV 93

Query: 80  SEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAA 139
           SE GL   LRH     K++G+GHE  DL+  +     W   + P   F+ F+ +VE +  
Sbjct: 94  SERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFPKLQFDDFIDRVESLGN 153

Query: 140 TKRVKMCLGELRERVAKGGDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNG 199
            K V+ CL  +R             + PI+++D              F   E     +NG
Sbjct: 154 KKEVQTCLKRIR------------LDLPILHED--------------FTANEGGGGESNG 213

Query: 200 ADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQR 259
            D             ATEE    + S S   GE               +   T LTEEQ+
Sbjct: 214 LD------------MATEE----VHSFSGNVGE-------------LDSLPGTTLTEEQQ 221

Query: 260 ARMEANRLKALERAAAK 277
            R++ NR  ALER  AK
Sbjct: 274 QRIKRNRQLALERRQAK 221

[Close]

BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot
Match: Q9BVW5 (TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.9e-04
Identity = 64/248 (25.81%), Postives = 98/248 (39.52%), Query Frame = 0


Query: 32  PNPNSTSNSSRLPSSSAHTAAPAAPSKAAEKPKKAPRTRPKLTPDLLLSEDGLGYVLRHF 91
           P P S        +     +   AP +   K +   R  PKL    L+SE GL   LRH 
Sbjct: 27  PPPASPERQDGEGTEPDEESGNGAPVRVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHV 86

Query: 92  PRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELR 151
               K++G+GHE  DL+  I     W   + P   FE F+ +VE + + K V+ CL  +R
Sbjct: 87  FDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 146

Query: 152 ERVAKGGDPTKWRESPIVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDMLQEV 211
                        + PI+++D ++N  E                    A++ E D+    
Sbjct: 147 ------------LDLPILHEDFVSNNDEV-------------------AENNEHDV---- 206

Query: 212 YEKATEEPLQNLQSDSHTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRLKALE 271
                            T+ E    +   ++    ++     LTEEQ+ R+E N+  ALE
Sbjct: 207 -----------------TSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNKQLALE 220

Query: 272 RAAAKALS 280
           R  AK LS
Sbjct: 267 RRQAKLLS 220

[Close]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL
Match: A0A5D3BGW4 (TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001060 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.8e-128
Identity = 250/287 (87.11%), Postives = 263/287 (91.64%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPN TSNSS+ P SS    APAAPSKA 
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS----APAAPSKAV 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHE+SDLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN-DDDINNEKE 180
           ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+PI+N DDD+NNEKE
Sbjct: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKE 180

Query: 181 AKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVA- 240
           AKDPE +FDN EEASLRNNGADDIE+DMLQEVYEKATEEPLQN QSDS T G TMEGVA 
Sbjct: 181 AKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVAN 240

Query: 241 -QANQEPNTSNSSET-QLTEEQRARMEANRLKALERAAAKALSLATV 284
            + NQEP TSNSSET +LTEEQR RMEANRLKALERAAAKA SLATV
Sbjct: 241 QEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL
Match: A0A1S3C4P4 (TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.8e-128
Identity = 250/287 (87.11%), Postives = 263/287 (91.64%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPN TSNSS+ P SS    APAAPSKA 
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS----APAAPSKAV 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHE+SDLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN-DDDINNEKE 180
           ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+PI+N DDD+NNEKE
Sbjct: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKE 180

Query: 181 AKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVA- 240
           AKDPE +FDN EEASLRNNGADDIE+DMLQEVYEKATEEPLQN QSDS T G TMEGVA 
Sbjct: 181 AKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVAN 240

Query: 241 -QANQEPNTSNSSET-QLTEEQRARMEANRLKALERAAAKALSLATV 284
            + NQEP TSNSSET +LTEEQR RMEANRLKALERAAAKA SLATV
Sbjct: 241 QEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL
Match: A0A6J1CPN9 (TIMELESS-interacting protein OS=Momordica charantia OX=3673 GN=LOC111012996 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.2e-126
Identity = 247/281 (87.90%), Postives = 258/281 (91.81%), Query Frame = 0


Query: 2   EKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAAE 61
           EKDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP+ST NSSR  SSS   AA AAPSK AE
Sbjct: 4   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSG--AAAAAPSKVAE 63

Query: 62  KPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI 121
           KPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI
Sbjct: 64  KPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI 123

Query: 122 LPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVNDDDINNEKEAK 181
           LPYYSFEHFVHKVEQVAATKRVKM LGELRERVA+GGDPTKWRESP VN +D+NNE EAK
Sbjct: 124 LPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN-EDVNNETEAK 183

Query: 182 DPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVAQAN 241
           D EDLFDN EEASLRNNG DD+E+DMLQE+YEKATEEPLQNLQSDSHT GETMEGV  +N
Sbjct: 184 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGV--SN 243

Query: 242 QEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLAT 283
           QEPN SNSSETQ+TEEQR RMEANRLKALERAA+KA SL T
Sbjct: 244 QEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQT 279

[Close]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL
Match: A0A0A0LI96 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.8e-125
Identity = 244/286 (85.31%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           MEKDN AV APTGC+KCGKPGHWSRDCPSSAPNPN TSNS    S+ + ++ PAAPSKA 
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNS----STPSFSSPPAAPSKAV 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPRTRPKLTP+LLLS+DGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN--DDDINNEK 180
           ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+PI+N  DDD+NNEK
Sbjct: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEK 180

Query: 181 EAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVA 240
           EAKDP+D+FDNQEEASLRNNGADDIE+DMLQEVYEKATEEPLQN QSDS T G TMEGV 
Sbjct: 181 EAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGV- 240

Query: 241 QANQEPNTSNSSET-QLTEEQRARMEANRLKALERAAAKALSLATV 284
            ANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKA SL TV
Sbjct: 241 -ANQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL
Match: A0A6J1G4B9 (TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.1e-122
Identity = 243/285 (85.26%), Postives = 254/285 (89.12%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNS+S     PSSS    APAAPSK A
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSP----PSSS----APAAPSKVA 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPR RPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHE+SDLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN--DDDINNEK 180
           ILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VA+GGDPTKWRESPIVN  DDDINNE 
Sbjct: 121 ILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNEN 180

Query: 181 EAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKAT-EEPLQNLQSDSHTNGETMEGV 240
           EAKD E LFDNQEEAS +NNGADDIE+DMLQEVYEKAT EEPL NLQSDS T GETMEGV
Sbjct: 181 EAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGV 240

Query: 241 AQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLAT 283
               +EPNTSNS+ET LTE+QRARMEANRLKALERAAAKA S  T
Sbjct: 241 VN-QEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPT 276

[Close]

BLAST of Lcy08g016690 vs. NCBI nr
Match: XP_008456510.1 (PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-interacting protein [Cucumis melo var. makuwa] >TYJ97891.1 TIMELESS-interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 467.2 bits (1201), Expect = 9.8e-128
Identity = 250/287 (87.11%), Postives = 263/287 (91.64%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPN TSNSS+ P SS    APAAPSKA 
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS----APAAPSKAV 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHE+SDLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN-DDDINNEKE 180
           ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+PI+N DDD+NNEKE
Sbjct: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKE 180

Query: 181 AKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVA- 240
           AKDPE +FDN EEASLRNNGADDIE+DMLQEVYEKATEEPLQN QSDS T G TMEGVA 
Sbjct: 181 AKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVAN 240

Query: 241 -QANQEPNTSNSSET-QLTEEQRARMEANRLKALERAAAKALSLATV 284
            + NQEP TSNSSET +LTEEQR RMEANRLKALERAAAKA SLATV
Sbjct: 241 QEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of Lcy08g016690 vs. NCBI nr
Match: XP_038889611.1 (TIMELESS-interacting protein [Benincasa hispida])

HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-126
Identity = 249/296 (84.12%), Postives = 263/296 (88.85%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSR-LPSSSAH---------- 60
           MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN TSNSS   PSS+ +          
Sbjct: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSSDCPSSAPNPNPTSNSSRP 60

Query: 61  --TAAPAAPSKAAEKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDL 120
             ++APAAPSK AEKPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPR FKYRGRGHE+SDL
Sbjct: 61  PFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRVFKYRGRGHEISDL 120

Query: 121 ENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESP 180
            N IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+P
Sbjct: 121 GNLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP 180

Query: 181 IVNDDDINNEKEAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDS 240
           I+NDDD+NNEKEAKDPE +FDNQEEA LRNNGADDIE+DMLQEVYEKATEEP QN+QSDS
Sbjct: 181 ILNDDDVNNEKEAKDPEGIFDNQEEA-LRNNGADDIEEDMLQEVYEKATEEPSQNVQSDS 240

Query: 241 HTNGETMEGVAQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLATV 284
            T GET+EGV  ANQEP  SNSSETQLTEEQR RMEANRLKALERAAAKA SL TV
Sbjct: 241 FTIGETIEGV--ANQEPKISNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV 293

[Close]

BLAST of Lcy08g016690 vs. NCBI nr
Match: XP_022143008.1 (TIMELESS-interacting protein [Momordica charantia])

HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-126
Identity = 247/281 (87.90%), Postives = 258/281 (91.81%), Query Frame = 0


Query: 2   EKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAAE 61
           EKDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP+ST NSSR  SSS   AA AAPSK AE
Sbjct: 4   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSG--AAAAAPSKVAE 63

Query: 62  KPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI 121
           KPKKAPRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI
Sbjct: 64  KPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI 123

Query: 122 LPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVNDDDINNEKEAK 181
           LPYYSFEHFVHKVEQVAATKRVKM LGELRERVA+GGDPTKWRESP VN +D+NNE EAK
Sbjct: 124 LPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN-EDVNNETEAK 183

Query: 182 DPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVAQAN 241
           D EDLFDN EEASLRNNG DD+E+DMLQE+YEKATEEPLQNLQSDSHT GETMEGV  +N
Sbjct: 184 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGV--SN 243

Query: 242 QEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLAT 283
           QEPN SNSSETQ+TEEQR RMEANRLKALERAA+KA SL T
Sbjct: 244 QEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQT 279

[Close]

BLAST of Lcy08g016690 vs. NCBI nr
Match: XP_004139395.1 (TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein Csa_019321 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 7.8e-125
Identity = 244/286 (85.31%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           MEKDN AV APTGC+KCGKPGHWSRDCPSSAPNPN TSNS    S+ + ++ PAAPSKA 
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNS----STPSFSSPPAAPSKAV 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPRTRPKLTP+LLLS+DGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN--DDDINNEK 180
           ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVA+GGDPTKWRE+PI+N  DDD+NNEK
Sbjct: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEK 180

Query: 181 EAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPLQNLQSDSHTNGETMEGVA 240
           EAKDP+D+FDNQEEASLRNNGADDIE+DMLQEVYEKATEEPLQN QSDS T G TMEGV 
Sbjct: 181 EAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGV- 240

Query: 241 QANQEPNTSNSSET-QLTEEQRARMEANRLKALERAAAKALSLATV 284
            ANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKA SL TV
Sbjct: 241 -ANQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Lcy08g016690 vs. NCBI nr
Match: KAG6599343.1 (TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030333.1 TIMELESS-interacting protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 3.3e-123
Identity = 246/285 (86.32%), Postives = 255/285 (89.47%), Query Frame = 0


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSTSNSSRLPSSSAHTAAPAAPSKAA 60
           M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP    NSSR PSSS    APAAPSK A
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSS----APAAPSKVA 60

Query: 61  EKPKKAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSH 120
           EKPKKAPR RPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHE+SDLEN IGLYREWHSH
Sbjct: 61  EKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 120

Query: 121 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKWRESPIVN--DDDINNEK 180
           ILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VA+GGDPTKWRESPIVN  DDDINNE 
Sbjct: 121 ILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNEN 180

Query: 181 EAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKAT-EEPLQNLQSDSHTNGETMEGV 240
           EAKD E LFDNQEEAS +NNGADDIE+DMLQEVYEKAT EEPL NLQSDS T GETMEGV
Sbjct: 181 EAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGV 240

Query: 241 AQANQEPNTSNSSETQLTEEQRARMEANRLKALERAAAKALSLAT 283
              NQEPNTSNS+ET LTE+QRARMEANRLKALERAAAKA S  T
Sbjct: 241 --VNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPT 275

[Close]

BLAST of Lcy08g016690 vs. TAIR 10
Match: AT3G02820.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 231.9 bits (590), Expect = 6.5e-61
Identity = 144/282 (51.06%), Postives = 188/282 (66.67%), Query Frame = 0


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAP-----NPNSTSNSSRLPSSSAHTAAPAAPSKAAEKP 68
           +APTGC+KCG+PGHWSRDCPSSAP     + +S+S  S++P++    ++  + +  A  P
Sbjct: 3   SAPTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIAPAP 62

Query: 69  K--KAPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHI 128
           K  K    RPKLTP+LLLSEDGLGYVLR+FP++FKYRGRG EVSDL N I LY EWH+H+
Sbjct: 63  KVTKTRVQRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHL 122

Query: 129 LPYYSFEHFVHKVEQVAATKRVKMCLGELRERVAKGGDPTKW---RESPIVNDDDINNEK 188
           LPYYSF+HFVHKV+QVA+TKRVK C+ ELRERVA G DP K    +E   V  DD + ++
Sbjct: 123 LPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSDDQDMDQ 182

Query: 189 EAKDPEDLFDNQEEASLRNNGADDIEDDMLQEVYEKATEEPL--QNLQSDSHTNGETMEG 248
            + D E++     +A   +  AD  ED ML E+++ A++ P   QN+   S    E    
Sbjct: 183 PSHDEENIPSKSVDA---DTNADAFEDSMLNEIFDNASKLPSDEQNMDKSSELTEE---- 242

Query: 249 VAQANQEPNTSNSSE--TQLTEEQRARMEANRLKALERAAAK 277
             +A  E N   + E    ++EEQR RMEANRLKALERA A+
Sbjct: 243 -QRARMEANRLKAMEKAQNISEEQRVRMEANRLKALERAKAR 276

The following BLAST results are available for this feature:

BLAST of Lcy08g016690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4QR88	4.0e-07	27.27	TIMELESS-interacting protein OS=Rattus norvegicus OX=10116 GN=Tipin PE=2 SV=1	[more]
Q91WA1	5.2e-07	29.75	TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2	[more]
Q3ZCC4	6.9e-07	26.19	TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1	[more]
Q5F416	1.1e-04	27.24	TIMELESS-interacting protein OS=Gallus gallus OX=9031 GN=TIPIN PE=2 SV=1	[more]
Q9BVW5	1.9e-04	25.81	TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2	[more]

BLAST of Lcy08g016690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGW4	4.8e-128	87.11	TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C4P4	4.8e-128	87.11	TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1	[more]
A0A6J1CPN9	1.2e-126	87.90	TIMELESS-interacting protein OS=Momordica charantia OX=3673 GN=LOC111012996 PE=3...	[more]
A0A0A0LI96	3.8e-125	85.31	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 P...	[more]
A0A6J1G4B9	5.1e-122	85.26	TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 ...	[more]

BLAST of Lcy08g016690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456510.1	9.8e-128	87.11	PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-in...	[more]
XP_038889611.1	2.4e-126	84.12	TIMELESS-interacting protein [Benincasa hispida]	[more]
XP_022143008.1	2.4e-126	87.90	TIMELESS-interacting protein [Momordica charantia]	[more]
XP_004139395.1	7.8e-125	85.31	TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein ...	[more]
KAG6599343.1	3.3e-123	86.32	TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of Lcy08g016690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02820.1	6.5e-61	51.06	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 13..29 e-value: 7.4E-7 score: 38.8
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 13..29 e-value: 1.6E-8 score: 34.3
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 14..29 score: 11.581206
None	No IPR available	GENE3D	4.10.60.10		coord: 10..74 e-value: 2.9E-9 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..263
None	No IPR available	PANTHER	PTHR13220:SF11	TIMELESS-INTERACTING PROTEIN	coord: 9..278
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 72..153 e-value: 6.4E-23 score: 80.5
IPR040038	TIPIN/Csm3/Swi3	PANTHER	PTHR13220	TIMELESS INTERACTING-RELATED	coord: 9..278
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 11..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g016690.1	Lcy08g016690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0043111	replication fork arrest
biological_process	GO:0048478	replication fork protection
cellular_component	GO:0031298	replication fork protection complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding