Lcy08g016300 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGTTTTGCAAATGGCCAAATTTTTTGAACCACAATCTTGAGTTTGCCAAACATTGTGACTGAAAATGAAAAGGAATGAAATGATAATTTTTGATACCCTTAATAAGGTAGGGTCAAATATTATTTTTATATTTATGAAACTAGTTATAAATTATAAAAAAAAAAATACTGGTTTCAATTATACTTCTGAATTTTCAAAAGTTTCATTTTAGTTCTCAAAATTTGAATTTTGTTTCGAAACAATCCTTGAAGACATTTTTTTTTGTTAAATTTATGGATGGAAAATGAAGGATTTGCATATGTATTGTTGCTTATGTGAACATATTTTAACATATACGTGAAGAAAACAATAAAAATACATGCAAACACATGTTTTTCGTTCATAAATTTAATAGAAAATGTCTCTCACGACCTTTTGGAAACAAACTTAAACTTCAAGGGCTAAAATGAACTCAGATGCCTCTTGGAATGAGGCCCAAGGTTGTGGAGGTGTTGGTTGGATAATCCGTGACTCCCAAGGATCTTTGGTGGTTGCGGGCAGCAAAACTTTACACAGAAATTGGCCGATTGATATGCTTGAAGCGTTTGCGACGATCAAGGAAGGGTTGTTGAATTTCCTTAATCTCAATCCTCCCCCCCATATCGGCTTGATCGTGGAATCTGACGCTGAGGACCTGATCAGCTCGCTTATCTCTTCATCTCCCAATCTCACTGAAATTCACTTCATCTTGGATGAAGTGAGATCGATCGCTAGCACCATCAAGGATATCTGCTTCCTCTGGTGCCCTAGATCTTCAAATGGTGTCGCGCATTCTCTCGCGCGTTTTGCTTCTCGAGTGTTGTCGCCTCGACCTCCTTCAAATGAAGCCGGTGGCAGTTTGTCTGTTTATTTGGATTCTTCGCAATTTCCCTCTTCTTCTTCCCCGGAAGTCTGTTTTTTTGGTAGGGAATCGTCTTTGCCTTTCTGGTTGTCCTCTGCTATAATCGAGGACCTTGTTTGTTGTGGTGGTTAG ATGGGAAATGCCTCTTGGAATGAGGCCCAAGGTTGTGGAGGTGTTGGTTGGATAATCCGTGACTCCCAAGGATCTTTGGTGGTTGCGGGCAGCAAAACTTTACACAGAAATTGGCCGATTGATATGCTTGAAGCGTTTGCGACGATCAAGGAAGGGTTGTTGAATTTCCTTAATCTCAATCCTCCCCCCCATATCGGCTTGATCGTGGAATCTGACGCTGAGGACCTGATCAGCTCGCTTATCTCTTCATCTCCCAATCTCACTGAAATTCACTTCATCTTGGATGAAGTGAGATCGATCGCTAGCACCATCAAGGATATCTGCTTCCTCTGGTGCCCTAGATCTTCAAATGGTGTCGCGCATTCTCTCGCGCGTTTTGCTTCTCGAGTGTTGTCGCCTCGACCTCCTTCAAATGAAGCCGGTGGCAGTTTGTCTGTTTATTTGGATTCTTCGCAATTTCCCTCTTCTTCTTCCCCGGAAGTCTGTTTTTTTGGTAGGGAATCGTCTTTGCCTTTCTGGTTGTCCTCTGCTATAATCGAGGACCTTGTTTGTTGTGGTGGTTAG ATGGGAAATGCCTCTTGGAATGAGGCCCAAGGTTGTGGAGGTGTTGGTTGGATAATCCGTGACTCCCAAGGATCTTTGGTGGTTGCGGGCAGCAAAACTTTACACAGAAATTGGCCGATTGATATGCTTGAAGCGTTTGCGACGATCAAGGAAGGGTTGTTGAATTTCCTTAATCTCAATCCTCCCCCCCATATCGGCTTGATCGTGGAATCTGACGCTGAGGACCTGATCAGCTCGCTTATCTCTTCATCTCCCAATCTCACTGAAATTCACTTCATCTTGGATGAAGTGAGATCGATCGCTAGCACCATCAAGGATATCTGCTTCCTCTGGTGCCCTAGATCTTCAAATGGTGTCGCGCATTCTCTCGCGCGTTTTGCTTCTCGAGTGTTGTCGCCTCGACCTCCTTCAAATGAAGCCGGTGGCAGTTTGTCTGTTTATTTGGATTCTTCGCAATTTCCCTCTTCTTCTTCCCCGGAAGTCTGTTTTTTTGGTAGGGAATCGTCTTTGCCTTTCTGGTTGTCCTCTGCTATAATCGAGGACCTTGTTTGTTGTGGTGGTTAG MGNASWNEAQGCGGVGWIIRDSQGSLVVAGSKTLHRNWPIDMLEAFATIKEGLLNFLNLNPPPHIGLIVESDAEDLISSLISSSPNLTEIHFILDEVRSIASTIKDICFLWCPRSSNGVAHSLARFASRVLSPRPPSNEAGGSLSVYLDSSQFPSSSSPEVCFFGRESSLPFWLSSAIIEDLVCCGG Homology
BLAST of Lcy08g016300 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.5e-10 Identity = 46/128 (35.94%), Postives = 76/128 (59.38%), Query Frame = 0
BLAST of Lcy08g016300 vs. ExPASy TrEMBL
Match: A0A6D2I187 (RNase H domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS6222 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08 Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of Lcy08g016300 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.3e-08 Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of Lcy08g016300 vs. ExPASy TrEMBL
Match: A0A6J5UF50 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.3e-08 Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of Lcy08g016300 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07 Identity = 44/128 (34.38%), Postives = 74/128 (57.81%), Query Frame = 0
BLAST of Lcy08g016300 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 74.7 bits (182), Expect = 9.4e-10 Identity = 46/128 (35.94%), Postives = 76/128 (59.38%), Query Frame = 0
BLAST of Lcy08g016300 vs. NCBI nr
Match: KAF7826352.1 (uncharacterized protein G2W53_017516 [Senna tora]) HSP 1 Score: 72.0 bits (175), Expect = 6.1e-09 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Lcy08g016300 vs. NCBI nr
Match: KAF7842590.1 (putative RNA-directed DNA polymerase [Senna tora]) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-08 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Lcy08g016300 vs. NCBI nr
Match: CAA7018987.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 70.1 bits (170), Expect = 2.3e-08 Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of Lcy08g016300 vs. NCBI nr
Match: KAF7825130.1 (putative RNA-directed DNA polymerase [Senna tora]) HSP 1 Score: 68.6 bits (166), Expect = 6.7e-08 Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Lcy08g016300 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06 Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of Lcy08g016300 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.3e-04 Identity = 34/125 (27.20%), Postives = 56/125 (44.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|