Lcy08g016280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g016280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pathogenesis-related protein PR-4-like
Location	Chr08: 46858873 .. 46860380 (+)
RNA-Seq Expression	Lcy08g016280
Synteny	Lcy08g016280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAGCTCAAAGTGGAAGCAATGTGAGAGCAACGTTTAACTTGTACAATGCTCCACAAATCAATTGGGATTTGAATGCAGTGAGTGCATTTTGTTCGACATGGGATGCCAATCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGATTCTTGTGGCCAATGTTTACTGGTACTTTCACACTAAACACATTACTAATTAGCTACTTGAGAGAGTTTTAATGATGTTTTGTTTTGTTTTTTTTTTTGGATGATAAACATTTAACCTAACACCTATAACCAACCCGGTTCTTATTTTTCGATGTCGGATTTTACAACATTCGTCTTGTCGCGCGTGTACGCATTGTGATATTAGTTTAATTCATGAGGTCTAATAACAGACTACATTGTTGGTGAGGAATGAAGTATATCAGATAATTTGAATATACCTCATCTCTAAACCTTTGCATAATGATTTGATATTGTCTACTTTGAGTTTAGACTTGCATGTTGAGGATCTCACATTGAAAAGATGAATGGAGACCTCACAATTTATAAGATATATGGGTTACTCCTCCCATTGTCAATTGGTTTTGAGAAGGAACTAATAAGATGTTGCCTCTTTGGATTTCACCATTCTTGGATCGAATACCCGTTGGGTTTCATGGGCTCTGATACCATAATAGACTATATGGAGTTCCATCTCAAAACCAATTGAGAATAAGTGGAGTAACTCATGTATCAATATATTTTTTTAACGTGGGATCCTTAACAAAAACCTCATGTTTATCTAATATGGTAATAAAGGCCATAAACCCAAACGAGTATTCAATCCAAGAAAAAAAAAATGGGATCCGAACCAAGAATGGTGAACCCAATGACGCACTATTTTGGTGGGGCATGTTGAATGGAGACCTCACAGTATTTGGTCCAAGAAAAAAAAATTGGGATTCGATCCAAGAATGATAAACCCAAAGAGGTTGGACTACACTTCTCTCATTACCAATTGGTTTTGAATTTGTTTCTTGATTCTACATAAAAAACGGGTAAAAGAGATATTGTCTTTAGTTTGAATATTCATGATCTTTCTTAGCCCATTTGGATATAATATTAAATTTATCATAACCCAATAGTTTTAGTTTTTGGATTCGTGGGTGATTTAATAGAGACCTAACATGGAATAAATAAATAAGATAGTGTGAGACTCGAACATAAAACATTTTATTTTGATACTAGAGCTAGCCAAAGTATTAGTCTCTCTAATCATTATTTATATGAAGAAAAATAAATTGTTTGATGACCAAAAAAAATGGCATGAATTTACAGGTGACAAACATTGAAACAGGTGCACAACAAACCGTGAGAATTGTGGATAAATGTGATAATGGAGGACTAGATTTGGATGTTGGAGTGTTCCAAAGTCTCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTAACAGTCAACTATGATTTTGTCAATTGTTGA

mRNA sequence

ATGTCCAAAGCTCAAAGTGGAAGCAATGTGAGAGCAACGTTTAACTTGTACAATGCTCCACAAATCAATTGGGATTTGAATGCAGTGAGTGCATTTTGTTCGACATGGGATGCCAATCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGATTCTTGTGGCCAATGTTTACTGGTGACAAACATTGAAACAGGTGCACAACAAACCGTGAGAATTGTGGATAAATGTGATAATGGAGGACTAGATTTGGATGTTGGAGTGTTCCAAAGTCTCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTAACAGTCAACTATGATTTTGTCAATTGTTGA

Coding sequence (CDS)

ATGTCCAAAGCTCAAAGTGGAAGCAATGTGAGAGCAACGTTTAACTTGTACAATGCTCCACAAATCAATTGGGATTTGAATGCAGTGAGTGCATTTTGTTCGACATGGGATGCCAATCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGATTCTTGTGGCCAATGTTTACTGGTGACAAACATTGAAACAGGTGCACAACAAACCGTGAGAATTGTGGATAAATGTGATAATGGAGGACTAGATTTGGATGTTGGAGTGTTCCAAAGTCTCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTAACAGTCAACTATGATTTTGTCAATTGTTGA

Protein sequence

MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

Homology

[Close]

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-49
Identity = 85/119 (71.43%), Postives = 99/119 (83.19%), Query Frame = 0


Query: 6   SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSC 65
           S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+PL WR +YGWTAFCGPVGP+G+DSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 66  GQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 125
           G+CL VTN  TGAQ TVRIVD+C NGGLDLDV VF+ +DTDGNGN  G L VNY FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-49
Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 6   SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSC 65
           S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+P  WRS+YGWTAFCGPVGP+G+DSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 66  GQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 125
           G+CL VTN  TGAQ TVRIVD+C NGGLDLD+ VFQ +DTDG GN  G L VNY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.2e-49
Identity = 86/124 (69.35%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWTAFCGP GP+
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG+CL VTN  TG Q TVRIVD+C NGGLDLDV VF  LDT+G G   G LTVNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 4.6e-48
Identity = 85/124 (68.55%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWTAFCGP GP+
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG+CL VTN  TG Q TVRIVD+C NGGLDLDV VF  LDT+G G   G L VNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.6e-46
Identity = 82/124 (66.13%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           ++ AQS +NVRAT++LYN   INWDL   S +C+TWDA++PLEWR +YGWTAFCGP GP 
Sbjct: 20  VAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPT 79

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCG+CL VTN  TG Q+TVRIVD+C NGGLDLDV VF  LDT+G G   G L VNY+
Sbjct: 80  GQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYE 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL
Match: A0A5D3D4F5 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001530 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.7e-64
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CLLVTN++TG Q+TVRIVD+C NGGLDLDVGVFQSLDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL
Match: A0A6J1CMK0 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013008 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDANQPLEWRSQYGWTAFCGPVGP 
Sbjct: 22  VSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGWTAFCGPVGPH 81

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCGQCLLVTN ETGAQQTVRIVD+C NGGLDLDVGVFQSLDT+GNGNANGFLTVNYD
Sbjct: 82  GQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGNANGFLTVNYD 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL
Match: A0A0A0LG74 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGP+GP 
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCG CLLVTN++TGAQQTVRIVD+C NGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 61  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 120

Query: 121 FVNC 125
           FVNC
Sbjct: 121 FVNC 124

[Close]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL
Match: A0A6J1KG47 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493585 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSASNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CLLVTN ETGAQQTVRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFL V+YD
Sbjct: 79  GQDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLIVDYD 138

Query: 121 FVNC 125
           FV C
Sbjct: 139 FVKC 142

[Close]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL
Match: A0A6J1G2Y5 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450308 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 113/124 (91.13%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           G+DSCG CLLVTN ETGAQQ VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YD
Sbjct: 79  GEDSCGLCLLVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]

BLAST of Lcy08g016280 vs. NCBI nr
Match: KAA0063600.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 9.8e-64
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CLLVTN++TG Q+TVRIVD+C NGGLDLDVGVFQSLDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]

BLAST of Lcy08g016280 vs. NCBI nr
Match: XP_022143020.1 (pathogenesis-related protein PR-4-like [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 3.7e-63
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDANQPLEWRSQYGWTAFCGPVGP 
Sbjct: 22  VSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGWTAFCGPVGPH 81

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCGQCLLVTN ETGAQQTVRIVD+C NGGLDLDVGVFQSLDT+GNGNANGFLTVNYD
Sbjct: 82  GQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGNANGFLTVNYD 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]

BLAST of Lcy08g016280 vs. NCBI nr
Match: KAE8651558.1 (hypothetical protein Csa_019464 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 2.4e-62
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGP+GP 
Sbjct: 10  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 69

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCG CLLVTN++TGAQQTVRIVD+C NGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 70  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 129

Query: 121 FVNC 125
           FVNC
Sbjct: 130 FVNC 133

[Close]

BLAST of Lcy08g016280 vs. NCBI nr
Match: XP_004139240.1 (pathogenesis-related protein PR-4 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 2.4e-62
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 79

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCG CLLVTN++TGAQQTVRIVD+C NGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 80  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]

BLAST of Lcy08g016280 vs. NCBI nr
Match: XP_023545388.1 (pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 5.4e-62
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SNVRATFN YNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQ
Sbjct: 12  LSKAQSASNVRATFNFYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 71

Query: 61  GQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           G+DSCG CLLVTN ET AQQTVRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFLT+NYD
Sbjct: 72  GEDSCGLCLLVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYD 131

Query: 121 FVNC 125
           FVNC
Sbjct: 132 FVNC 135

[Close]

BLAST of Lcy08g016280 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-44
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 5   QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDS 64
           +S SNVRAT++ YN  Q NWDL AVSA+CSTWDA++P  WRS+YGWTAFCGP GP+GQ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 65  CGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 124
           CG+CL V N  T A  TVRIVD+C NGGLDLDV +F  +DTDG G   G L V+Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of Lcy08g016280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09761	1.1e-49	71.43	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	1.9e-49	71.43	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]
P29062	9.2e-49	69.35	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29063	4.6e-48	68.55	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P32045	5.6e-46	66.13	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of Lcy08g016280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D4F5	4.7e-64	91.94	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CMK0	1.8e-63	91.94	pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LG74	1.2e-62	91.94	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4...	[more]
A0A6J1KG47	4.4e-62	91.13	pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1G2Y5	4.4e-62	91.13	pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Lcy08g016280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063600.1	9.8e-64	91.94	pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pa...	[more]
XP_022143020.1	3.7e-63	91.94	pathogenesis-related protein PR-4-like [Momordica charantia]	[more]
KAE8651558.1	2.4e-62	91.94	hypothetical protein Csa_019464 [Cucumis sativus]	[more]
XP_004139240.1	2.4e-62	91.94	pathogenesis-related protein PR-4 [Cucumis sativus]	[more]
XP_023545388.1	5.4e-62	90.32	pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy08g016280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	2.4e-44	65.00	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 59..77 score: 64.21 coord: 40..58 score: 76.84 coord: 78..96 score: 79.65 coord: 99..123 score: 57.33
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 7..124 e-value: 2.8E-50 score: 169.2
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 5..124 score: 73.563179
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 5..124 e-value: 2.0E-52 score: 178.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 6..124
None	No IPR available	PANTHER	PTHR46351:SF3	WOUND-INDUCED PROTEIN WIN2	coord: 5..124
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 5..124
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 117..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g016280.1	Lcy08g016280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity