Lcy08g015580 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g015580
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	TIR-NBS-LRR disease resistance protein
Location	Chr08: 46024441 .. 46026556 (+)
RNA-Seq Expression	Lcy08g015580
Synteny	Lcy08g015580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATGCCCCACTTCTTCATTGTCATCAGACTTTTATTGAGAGGCTAAGCCTTTGATATTTGTGCCAGTGCTCCTTATTCATTCCATTCTTATCCATGTCTGCTCTGTATTCTTCAAAAACATTGTCACGGCCAGAGAAAACTGTTCCTTCGCCTTTTTCGAATTTTTCCTGTGCGTTGCTTTTGTTGTGATGGGTTCTTCTGTTCTCCTCGCTGAATCATCGTCTTCCTCTCCAAATTTCAAGTGGAATTATGATGTGTTTTTGAGTTTCAGAGGAGAGGATACAAGATCCAACTTCACCAGTCATCTTGACATGGCCTTGCGTCAAAAGGGAGTCTACTTCTTCATAGATGACAAGCTCGACAGAGGAGGGCAAATTTCTGAATCTCTTCTCAAATGTATTGAAGGATCTAGGATTTCCATTATTATATTTTCTGAAAATTATGCATCTTCCACTTGGTGTTTGGATGAACTGGTCAAAATCATTGAGTGTATGAAATCCAAGGGACAGTTAGTTTTACCGGTCTTCTACAAGGTGGATCCATCCGAAGTACGAAAACAAACCGGTAGATTTGGTGAAACATTGGCCAAACATGAAGCTAAGTTTATGAGCACCAAGAAGATTCAAACATGGAAGGAAGCTTTGACTATTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAACTTACAGGTATTTTTCTCGAGACTCTATTTTTTCAATTCCCTATTTTTGGTTTAACAAGCACACTAATTCCCAACTAGATACCATCCTAATGATAAAAATGCCAAATTTTAAAATTGGAAAGATTCCTTATCTGGATGCAACTTAACTTCATATGCTATTTCCTATGTTCATCACCTTTTTATTCACATATGATGTTTTTAAACCATAGGAATGAGGCTGATCTTATTCAGAACCTTGTTAAAGAAGTGTGGTCTAAAGCAAATAAGACCCAAATACTTGATCTAGCCAAATATCCTGTTGGAATTGACTCTCAACTAAGAACTATTGAGTTGGCCTCCCATGTTGTGTCCGATGGCGTTTATATGGTAGGGCTATATGGCATGGGAGGCATTGGTAAGACAACTCTAGCCAAAGCTTTATACAACAAAATTGCTAATCAATTTGAAGGTTGCAGCTTTCTTTCAAATGTTAGAGAAGCCTCGAAGCAATTCAATGGCCTAGTTCAACTACAGGAAAATCTACTCCATGCAATCTTAGAGGATAATTTGAAGGTTGACAATGTCCACAAAGGAATAAATATCATAAGGAGTAGACTACGTTCAAAGAAAGTTCTTATTGTTCTTGATGATGTGGATAAGTGTGATCAATTAGAAAAATTGGTTGGTGGACATGATTGGTTCGGTCGAGGTAGTAAAATCATTGTGACAACAAGGAATAAACAGTTACTTTCTAAGCATGGATTTGATACAATGCATGATATTCAAGGATTGGAAGAAGACAAAGCCCTTGAGCTTTTTAGTTGGCATGCTTTTAAGGAAAGTCATCCATCAACTGATTATTTAGACCTTTCGAAACGTGCTACAAGTTATTGCAAAGGTCTTCCTTTAGCTCTTATTGTTTTGGGTTCTTTCCTATGTAATAGAGACCAATCAAAATGGGAAAATATACTATCCGAATTTGAAAGCTCTCTTACCAAAGATATTGAAGATATTCTTCAAATAAGTTTTGATGGACTTGCAGACAAAGTAAAAGATATTTTCCTTGATATTTCTTGTTTTTTCGTGGGAGAGGATGTTGACGACGTTGAGAATATGTTAGAGTCATGTGATCTCAATCCAGATTATGGAATTATGATTCTCAAGGATCTTTCCCTTCTTACTATTGAAGATAAAAAGTTGAAAATGCATGATTTAATACGACAAATGGGTCAAACAATTGTTCGTCGTGAATCTTCTGAGCCTGAAAAGAGAAGTAGGTTGTGGATGACTGAAGAAATAATTAATTTGGAAGAGAATTCCGTAAGTAGCCTCACACAAAAGTAGTTTTATTTACTTACTTCCAAGACTTTTGTTGATAATGTTAAATTACTGGATTTATGACTTTGTAGGGAGCCGATGCAGTTAAAGCAATAAAGCTAGACTTTCCCTACAC

mRNA sequence

CAAAATGCCCCACTTCTTCATTGTCATCAGACTTTTATTGAGAGGCTAAGCCTTTGATATTTGTGCCAGTGCTCCTTATTCATTCCATTCTTATCCATGTCTGCTCTGTATTCTTCAAAAACATTGTCACGGCCAGAGAAAACTGTTCCTTCGCCTTTTTCGAATTTTTCCTGTGCGTTGCTTTTGTTGTGATGGGTTCTTCTGTTCTCCTCGCTGAATCATCGTCTTCCTCTCCAAATTTCAAGTGGAATTATGATGTGTTTTTGAGTTTCAGAGGAGAGGATACAAGATCCAACTTCACCAGTCATCTTGACATGGCCTTGCGTCAAAAGGGAGTCTACTTCTTCATAGATGACAAGCTCGACAGAGGAGGGCAAATTTCTGAATCTCTTCTCAAATGTATTGAAGGATCTAGGATTTCCATTATTATATTTTCTGAAAATTATGCATCTTCCACTTGGTGTTTGGATGAACTGGTCAAAATCATTGAGTGTATGAAATCCAAGGGACAGTTAGTTTTACCGGTCTTCTACAAGGTGGATCCATCCGAAGTACGAAAACAAACCGGTAGATTTGGTGAAACATTGGCCAAACATGAAGCTAAGTTTATGAGCACCAAGAAGATTCAAACATGGAAGGAAGCTTTGACTATTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAACTTACAGGGAGCCGATGCAGTTAAAGCAATAAAGCTAGACTTTCCCTACAC

Coding sequence (CDS)

ATGGGTTCTTCTGTTCTCCTCGCTGAATCATCGTCTTCCTCTCCAAATTTCAAGTGGAATTATGATGTGTTTTTGAGTTTCAGAGGAGAGGATACAAGATCCAACTTCACCAGTCATCTTGACATGGCCTTGCGTCAAAAGGGAGTCTACTTCTTCATAGATGACAAGCTCGACAGAGGAGGGCAAATTTCTGAATCTCTTCTCAAATGTATTGAAGGATCTAGGATTTCCATTATTATATTTTCTGAAAATTATGCATCTTCCACTTGGTGTTTGGATGAACTGGTCAAAATCATTGAGTGTATGAAATCCAAGGGACAGTTAGTTTTACCGGTCTTCTACAAGGTGGATCCATCCGAAGTACGAAAACAAACCGGTAGATTTGGTGAAACATTGGCCAAACATGAAGCTAAGTTTATGAGCACCAAGAAGATTCAAACATGGAAGGAAGCTTTGACTATTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAACTTACAGGGAGCCGATGCAGTTAAAGCAATAA

Protein sequence

MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ

Homology

[Close]

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-44
Identity = 99/175 (56.57%), Postives = 116/175 (66.29%), Query Frame = 0


Query: 3   SSVLLAESSSSSPNF--KWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 62
           +S   A SSSS+P+      YDVFLSFRGEDTR NFT HL  AL ++G+  F DD+L RG
Sbjct: 4   TSSFRASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRLRRG 63

Query: 63  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 122
             I+  LLK IE SR S+I+FSENYA S WCLDELVKI+EC K  G  V P+FY VDPS 
Sbjct: 64  EAIAPELLKAIEESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSH 123

Query: 123 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYR-EPMQLKQ 175
           VRKQ G FGE  A +E  +    KI  W+ ALT AA LSGW L   R E  Q+K+
Sbjct: 124 VRKQEGSFGEAFAGYEENWKD--KIPRWRTALTEAANLSGWHLLDDRYESNQIKE 176

[Close]

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 97/172 (56.40%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 8   AESSSSSPNF--KWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISE 67
           + SSSS+P+      YDVFLSFRGEDTR NFT HL  AL ++G+  F DDKL RG  I+ 
Sbjct: 12  SSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLRRGEAIAP 71

Query: 68  SLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSK---GQLVLPVFYKVDPSEVR 127
            LLK IE SR S+I+FSENYA S WCLDELVKI+EC K K   G  V P+FY VDPS VR
Sbjct: 72  ELLKAIEESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVFPIFYHVDPSHVR 131

Query: 128 KQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           KQ G FGE  A +        KI  W+ ALT AA LSGW L    E  Q+K+
Sbjct: 132 KQEGSFGEAFAGYGENLKD--KIPRWRTALTEAANLSGWPLQDGYESNQIKE 181

[Close]

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-37
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 12  SSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDK-LDRGGQISESLLKC 71
           +SS +   +YDVFLSFRGEDTR  F  HL  AL +KG++ F+DDK L RG  IS  L+K 
Sbjct: 3   TSSSHHGRSYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKA 62

Query: 72  IEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTGRFGE 131
           I  SR ++++FS+NYASSTWCL+ELVKI+E  +    +V+PVFY VDPS VRKQ G +  
Sbjct: 63  IGESRFAVVVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVRKQNGEYAV 122

Query: 132 TLAKHEAKFMSTK-KIQTWKEALTIAAGLSGWDL 164
              K EA  +  + K+  W+EALT  A +SG DL
Sbjct: 123 CFTKFEANLVDDRDKVLRWREALTKVANISGHDL 156

[Close]

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 83/156 (53.21%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 7   LAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDK-LDRGGQISE 66
           +A SSSSS   +W+YDVFLSFRGEDTR  FTSHL   L  KG+  F DDK L+ G  I  
Sbjct: 1   MASSSSSS---RWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPG 60

Query: 67  SLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQT 126
            L K IE S+ +I++FSENYA+S WCL+ELVKI+EC     Q V+P+FY VDPS VR Q 
Sbjct: 61  ELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQK 120

Query: 127 GRFGETLAKHEAKFM-STKKIQTWKEALTIAAGLSG 161
             F +   +HE K+    + IQ W+ AL  AA L G
Sbjct: 121 ESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153

[Close]

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot
Match: O82500 (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-36
Identity = 78/166 (46.99%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 7   LAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISES 66
           +A SSS+S    W YDVF SFRGED R+NF SHL      KG+  F DD + R   I   
Sbjct: 1   MASSSSNS----WRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHE 60

Query: 67  LLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTG 126
           L   I  S+IS+++FSENYASS+WCLDEL++I++C + +G  V+PVFYKVDPS++RKQTG
Sbjct: 61  LRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTG 120

Query: 127 RFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSG-----WDLATYR 168
           +FG +  +      + ++   W+ ALT AA + G     WD   Y+
Sbjct: 121 KFGMSFLE-TCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYK 161

[Close]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL
Match: A0A0A0KNK0 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 134/174 (77.01%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MGSSVL-LAESSSS-SPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLD 60
           MGSS++ LA+SSSS S N KW+YDVFLSFRGEDTR+NFTSHLD ALR+KGV FFIDDKL+
Sbjct: 1   MGSSLVGLAQSSSSCSSNLKWSYDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLE 60

Query: 61  RGGQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDP 120
           RGGQISESLLK I+GS+ISIIIFS+NYASSTWCLDELVKI++CMKS G +V PVFYKVDP
Sbjct: 61  RGGQISESLLKSIDGSKISIIIFSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDP 120

Query: 121 SEVRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQL 173
           SEVRKQTG FGE LAKHEA  + T K+Q WKEALT AA LSGWDLAT +    L
Sbjct: 121 SEVRKQTGGFGEALAKHEANELMTNKVQPWKEALTTAASLSGWDLATRKNEADL 174

[Close]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL
Match: E7CHD2 (Putative TIR-NBS class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63
Identity = 129/174 (74.14%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           MGSSV+  ES SSSPNF ++YDVF SFRGEDTRSNF SHL MALR K V  FIDDKL RG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
            QI ESLLK IE SR+S++IFS++YASSTWCLDELVKIIEC KSKGQ V PVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           VRKQTG FGE LAKHEA  + T KIQ W+EALT AAGLSGWDLA  ++  +L Q
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANSKDEAELIQ 174

[Close]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL
Match: A0A0A0LFS4 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022790 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63
Identity = 129/174 (74.14%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           MGSSV+  ES SSSPNF ++YDVF SFRGEDTRSNF SHL MALR K V  FIDDKL RG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
            QI ESLLK IE SR+S++IFS++YASSTWCLDELVKIIEC KSKGQ V PVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           VRKQTG FGE LAKHEA  + T KIQ W+EALT AAGLSGWDLA  ++  +L Q
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANSKDEAELIQ 174

[Close]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL
Match: A0A6J1G3D0 (TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450402 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 124/168 (73.81%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           M SS+ + ESS+ SPN KW+YDVFLSFRGEDTRSNFTSHLDMALRQKGV  FIDDKL+RG
Sbjct: 1   MDSSIAMTESSALSPNLKWSYDVFLSFRGEDTRSNFTSHLDMALRQKGVNVFIDDKLNRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
             ISESL + IE + ISI+IFSENYASS+WCLDELVKIIEC KSKGQ+V P+FYKVDPS+
Sbjct: 61  ELISESLFRSIEEALISIVIFSENYASSSWCLDELVKIIECKKSKGQIVWPIFYKVDPSD 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYRE 169
           VRKQTG FGE LA H+AKF +  KIQ W+EALT  A LSGWDL   +E
Sbjct: 121 VRKQTGSFGEALATHQAKFET--KIQIWREALTTTANLSGWDLGARKE 166

[Close]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL
Match: A0A1S3BZQ4 (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494963 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 128/174 (73.56%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           MGSSV+   SS S PN  ++YDVF SFRGEDTRSNF SHL MALR K V  FIDDKL RG
Sbjct: 1   MGSSVVRVGSSFSDPNCNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
            QISESLLK IE SR+S++IFS++YASSTWCLDELVKIIEC KSKGQ VLPVFYKVDPSE
Sbjct: 61  EQISESLLKSIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVLPVFYKVDPSE 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           VRKQT  FGE LAKHEA  + T KIQ WKEALT AAGLSGWDLA  ++  +L Q
Sbjct: 121 VRKQTDWFGEALAKHEANKLLTNKIQPWKEALTFAAGLSGWDLANSKDEAELIQ 174

[Close]

BLAST of Lcy08g015580 vs. NCBI nr
Match: KGN51651.2 (hypothetical protein Csa_008503 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 134/174 (77.01%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MGSSVL-LAESSSS-SPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLD 60
           MGSS++ LA+SSSS S N KW+YDVFLSFRGEDTR+NFTSHLD ALR+KGV FFIDDKL+
Sbjct: 1   MGSSLVGLAQSSSSCSSNLKWSYDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLE 60

Query: 61  RGGQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDP 120
           RGGQISESLLK I+GS+ISIIIFS+NYASSTWCLDELVKI++CMKS G +V PVFYKVDP
Sbjct: 61  RGGQISESLLKSIDGSKISIIIFSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDP 120

Query: 121 SEVRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQL 173
           SEVRKQTG FGE LAKHEA  + T K+Q WKEALT AA LSGWDLAT +    L
Sbjct: 121 SEVRKQTGGFGEALAKHEANELMTNKVQPWKEALTTAASLSGWDLATRKNEADL 174

[Close]

BLAST of Lcy08g015580 vs. NCBI nr
Match: XP_031741747.1 (TMV resistance protein N [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 134/174 (77.01%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MGSSVL-LAESSSS-SPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLD 60
           MGSS++ LA+SSSS S N KW+YDVFLSFRGEDTR+NFTSHLD ALR+KGV FFIDDKL+
Sbjct: 1   MGSSLVGLAQSSSSCSSNLKWSYDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLE 60

Query: 61  RGGQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDP 120
           RGGQISESLLK I+GS+ISIIIFS+NYASSTWCLDELVKI++CMKS G +V PVFYKVDP
Sbjct: 61  RGGQISESLLKSIDGSKISIIIFSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDP 120

Query: 121 SEVRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQL 173
           SEVRKQTG FGE LAKHEA  + T K+Q WKEALT AA LSGWDLAT +    L
Sbjct: 121 SEVRKQTGGFGEALAKHEANELMTNKVQPWKEALTTAASLSGWDLATRKNEADL 174

[Close]

BLAST of Lcy08g015580 vs. NCBI nr
Match: XP_011650108.2 (TMV resistance protein N [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 6.8e-63
Identity = 129/174 (74.14%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           MGSSV+  ES SSSPNF ++YDVF SFRGEDTRSNF SHL MALR K V  FIDDKL RG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
            QI ESLLK IE SR+S++IFS++YASSTWCLDELVKIIEC KSKGQ V PVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           VRKQTG FGE LAKHEA  + T KIQ W+EALT AAGLSGWDLA  ++  +L Q
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANSKDEAELIQ 174

[Close]

BLAST of Lcy08g015580 vs. NCBI nr
Match: ADU33177.1 (putative TIR-NBS class resistance protein [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 6.8e-63
Identity = 129/174 (74.14%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           MGSSV+  ES SSSPNF ++YDVF SFRGEDTRSNF SHL MALR K V  FIDDKL RG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
            QI ESLLK IE SR+S++IFS++YASSTWCLDELVKIIEC KSKGQ V PVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           VRKQTG FGE LAKHEA  + T KIQ W+EALT AAGLSGWDLA  ++  +L Q
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANSKDEAELIQ 174

[Close]

BLAST of Lcy08g015580 vs. NCBI nr
Match: KAG6599270.1 (Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 124/168 (73.81%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MGSSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRG 60
           M SS+ + ESS+ SPN KW+YDVFLSFRGEDTRSNFTSHLDMALRQKGV  FIDDKL+RG
Sbjct: 1   MDSSIAMTESSALSPNLKWSYDVFLSFRGEDTRSNFTSHLDMALRQKGVNVFIDDKLNRG 60

Query: 61  GQISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSE 120
             ISESL + IE + ISI+IFSENYASS+WCLDELVKIIEC KSKGQ+V P+FYKVDPS+
Sbjct: 61  ELISESLFRSIEEALISIVIFSENYASSSWCLDELVKIIECKKSKGQIVWPIFYKVDPSD 120

Query: 121 VRKQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYRE 169
           VRKQTG FGE LA H+AKF +  KIQ W+EALT  A LSGWDL   +E
Sbjct: 121 VRKQTGSFGEALATHQAKFET--KIQIWREALTTTANLSGWDLGARKE 166

[Close]

BLAST of Lcy08g015580 vs. TAIR 10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 151.4 bits (381), Expect = 6.8e-37
Identity = 78/166 (46.99%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 7   LAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISES 66
           +A SSS+S    W YDVF SFRGED R+NF SHL      KG+  F DD + R   I   
Sbjct: 1   MASSSSNS----WRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHE 60

Query: 67  LLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTG 126
           L   I  S+IS+++FSENYASS+WCLDEL++I++C + +G  V+PVFYKVDPS++RKQTG
Sbjct: 61  LRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTG 120

Query: 127 RFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSG-----WDLATYR 168
           +FG +  +      + ++   W+ ALT AA + G     WD   Y+
Sbjct: 121 KFGMSFLE-TCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYK 161

[Close]

BLAST of Lcy08g015580 vs. TAIR 10
Match: AT5G44510.1 (target of AVRB operation1 )

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-36
Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = 0


Query: 3   SSVLLAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQ 62
           SS L + S  SS +  W + VFLSFRGED R    SH+    ++ G+  FID+++ RGG 
Sbjct: 22  SSSLSSSSPPSSLSQNWLHPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGS 81

Query: 63  ISESLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVR 122
           I   LL+ I GS+I+II+ S NY SS WCLDELV+I++C +  GQ V+ VFY VDPS+VR
Sbjct: 82  IGPELLQAIRGSKIAIILLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVR 141

Query: 123 KQTGRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWD 163
           KQ G FG+   K        + +Q WK+ALT AA + G D
Sbjct: 142 KQKGDFGKVF-KKTCVGRPEEMVQRWKQALTSAANILGED 180

[Close]

BLAST of Lcy08g015580 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 148.7 bits (374), Expect = 4.4e-36
Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = 0


Query: 7   LAESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDD-KLDRGGQISE 66
           L  SSSSS +  W  DVF+SFRGED R  F SHL     + G+  F DD  L RG  IS 
Sbjct: 4   LPSSSSSSSSTVWKTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISP 63

Query: 67  SLLKCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQT 126
            L+  I+GSR +I++ S NYA+S+WCLDEL+KI+EC K     ++P+FY+VDPS+VR+Q 
Sbjct: 64  ELIDAIKGSRFAIVVVSRNYAASSWCLDELLKIMECNK---DTIVPIFYEVDPSDVRRQR 123

Query: 127 GRFGETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQLKQ 175
           G FGE +  H  K    +K+  WKEAL   A +SG D   + +   +K+
Sbjct: 124 GSFGEDVESHSDK----EKVGKWKEALKKLAAISGEDSRNWDDSKLIKK 165

[Close]

BLAST of Lcy08g015580 vs. TAIR 10
Match: AT4G16990.1 (disease resistance protein (TIR-NBS class), putative )

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 9   ESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISESLL 68
           +SSSS      +YDVF +FRGED R +  SHL   L +K +  F D++++R  +I+  LL
Sbjct: 2   KSSSSQ-----SYDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELL 61

Query: 69  KCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTGRF 128
             IE SRIS+++FS+NYASSTWCLDELVKI EC +   Q+V+P+FYKVDPS VRKQTG F
Sbjct: 62  LAIENSRISLVVFSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEF 121

Query: 129 GETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQL 173
           G    +   K  +  + + W  AL   A L+G DL  +R   ++
Sbjct: 122 GMVFGE-TCKGRTENEKRKWMRALAEVAHLAGEDLRNWRSEAEM 159

[Close]

BLAST of Lcy08g015580 vs. TAIR 10
Match: AT4G16990.2 (disease resistance protein (TIR-NBS class), putative )

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 9   ESSSSSPNFKWNYDVFLSFRGEDTRSNFTSHLDMALRQKGVYFFIDDKLDRGGQISESLL 68
           +SSSS      +YDVF +FRGED R +  SHL   L +K +  F D++++R  +I+  LL
Sbjct: 2   KSSSSQ-----SYDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELL 61

Query: 69  KCIEGSRISIIIFSENYASSTWCLDELVKIIECMKSKGQLVLPVFYKVDPSEVRKQTGRF 128
             IE SRIS+++FS+NYASSTWCLDELVKI EC +   Q+V+P+FYKVDPS VRKQTG F
Sbjct: 62  LAIENSRISLVVFSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEF 121

Query: 129 GETLAKHEAKFMSTKKIQTWKEALTIAAGLSGWDLATYREPMQL 173
           G    +   K  +  + + W  AL   A L+G DL  +R   ++
Sbjct: 122 GMVFGE-TCKGRTENEKRKWMRALAEVAHLAGEDLRNWRSEAEM 159

The following BLAST results are available for this feature:

BLAST of Lcy08g015580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	3.3e-44	56.57	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	1.4e-42	56.40	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
A0A290U7C4	5.1e-37	52.60	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q40392	1.1e-36	53.21	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
O82500	9.6e-36	46.99	Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy08g015580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK0	1.3e-67	77.01	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV...	[more]
E7CHD2	3.3e-63	74.14	Putative TIR-NBS class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
A0A0A0LFS4	3.3e-63	74.14	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022790 PE=4 SV...	[more]
A0A6J1G3D0	7.3e-63	73.81	TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3BZQ4	2.1e-62	73.56	TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494963...	[more]

BLAST of Lcy08g015580 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51651.2	2.7e-67	77.01	hypothetical protein Csa_008503 [Cucumis sativus]	[more]
XP_031741747.1	2.7e-67	77.01	TMV resistance protein N [Cucumis sativus]	[more]
XP_011650108.2	6.8e-63	74.14	TMV resistance protein N [Cucumis sativus]	[more]
ADU33177.1	6.8e-63	74.14	putative TIR-NBS class resistance protein [Cucumis sativus]	[more]
KAG6599270.1	1.5e-62	73.81	Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy08g015580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11170.1	6.8e-37	46.99	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G44510.1	3.4e-36	48.13	target of AVRB operation1	[more]
AT5G17680.1	4.4e-36	46.75	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT4G16990.1	1.3e-35	47.56	disease resistance protein (TIR-NBS class), putative	[more]
AT4G16990.2	1.3e-35	47.56	disease resistance protein (TIR-NBS class), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 20..158 e-value: 1.9E-45 score: 167.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 20..154 e-value: 5.8E-48 score: 163.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 19..174 score: 38.555077
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 17..174 e-value: 6.6E-68 score: 229.6
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 10..161
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 11..169
None	No IPR available	PANTHER	PTHR32009:SF60	TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN	coord: 11..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g015580.1	Lcy08g015580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0006952	defense response
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity