Lcy08g014080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g014080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr08: 44272380 .. 44273081 (-)
RNA-Seq Expression	Lcy08g014080
Synteny	Lcy08g014080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTTTGTGGGATGTGACAGGAGCAGACTTATTGAGGGAGGTTCAAAATCGATGGATTTATATTTGTAATAGAACCTCCACAAGTACCCTCGAAAGGATATGTGTGGGCGCTTGGGCTATATGGAATGATCGGAACAATTTGGTGCACAAAGGTCCAGTCCCATCTGTGGACTATCTATGTGACTGGATCCAGGAGTATATCTCTGAATGCCAGGGTGCCAGACAACAATCGGGCCGTCAAGTCATGCCACTGGATAGAATCTCTGATATGATATCAAGTGCAGAGGCAATAATCTTACATGTAGATGCGGCCTGTGATGAGGTAGGTCGGCATAGTGGCCTGGGAGCTGTTATCAGAAATAAGGAGGGTCAATTGATAGCATCCCTTTCTCAGGCTACGCATATTTACTCGTCCCCTTTATGTGCAGAGGCAATTTCTATGCTTGAGGGTCTTAAGCTTGCAAATGTTTGGAATATTCAGTGTTTGACTGTTTGTTCAGACTCCTTAGCCTTAATCAAAATCCTGTTGCAAGGTAGCAGATGTCCGACGGACTGCTCAAACATTATCTCAGACATTCATCTTTTATGTGCATCGTTTGAGTCCATCCGTTTTAATCATGTGAACCGTGAGTATAATTTGTTAGCTCATGATTTAGCTCGGTTTGATCTATCTTCTTCATATAGTTGTTTGGTATAG

mRNA sequence

ATGATGGGTTTGTGGGATGTGACAGGAGCAGACTTATTGAGGGAGGTTCAAAATCGATGGATTTATATTTGTAATAGAACCTCCACAAGTACCCTCGAAAGGATATGTGTGGGCGCTTGGGCTATATGGAATGATCGGAACAATTTGGTGCACAAAGGTCCAGTCCCATCTGTGGACTATCTATGTGACTGGATCCAGGAGTATATCTCTGAATGCCAGGGTGCCAGACAACAATCGGGCCGTCAAGTCATGCCACTGGATAGAATCTCTGATATGATATCAAGTGCAGAGGCAATAATCTTACATGTAGATGCGGCCTGTGATGAGGTAGGTCGGCATAGTGGCCTGGGAGCTGTTATCAGAAATAAGGAGGGTCAATTGATAGCATCCCTTTCTCAGGCTACGCATATTTACTCGTCCCCTTTATGTGCAGAGGCAATTTCTATGCTTGAGGGTCTTAAGCTTGCAAATGTTTGGAATATTCAGTGTTTGACTGTTTGTTCAGACTCCTTAGCCTTAATCAAAATCCTGTTGCAAGGTAGCAGATGTCCGACGGACTGCTCAAACATTATCTCAGACATTCATCTTTTATGTGCATCGTTTGAGTCCATCCGTTTTAATCATGTGAACCGTGAGTATAATTTGTTAGCTCATGATTTAGCTCGGTTTGATCTATCTTCTTCATATAGTTGTTTGGTATAG

Coding sequence (CDS)

ATGATGGGTTTGTGGGATGTGACAGGAGCAGACTTATTGAGGGAGGTTCAAAATCGATGGATTTATATTTGTAATAGAACCTCCACAAGTACCCTCGAAAGGATATGTGTGGGCGCTTGGGCTATATGGAATGATCGGAACAATTTGGTGCACAAAGGTCCAGTCCCATCTGTGGACTATCTATGTGACTGGATCCAGGAGTATATCTCTGAATGCCAGGGTGCCAGACAACAATCGGGCCGTCAAGTCATGCCACTGGATAGAATCTCTGATATGATATCAAGTGCAGAGGCAATAATCTTACATGTAGATGCGGCCTGTGATGAGGTAGGTCGGCATAGTGGCCTGGGAGCTGTTATCAGAAATAAGGAGGGTCAATTGATAGCATCCCTTTCTCAGGCTACGCATATTTACTCGTCCCCTTTATGTGCAGAGGCAATTTCTATGCTTGAGGGTCTTAAGCTTGCAAATGTTTGGAATATTCAGTGTTTGACTGTTTGTTCAGACTCCTTAGCCTTAATCAAAATCCTGTTGCAAGGTAGCAGATGTCCGACGGACTGCTCAAACATTATCTCAGACATTCATCTTTTATGTGCATCGTTTGAGTCCATCCGTTTTAATCATGTGAACCGTGAGTATAATTTGTTAGCTCATGATTTAGCTCGGTTTGATCTATCTTCTTCATATAGTTGTTTGGTATAG

Protein sequence

MMGLWDVTGADLLREVQNRWIYICNRTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQGARQQSGRQVMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFESIRFNHVNREYNLLAHDLARFDLSSSYSCLV

Homology

[Close]

BLAST of Lcy08g014080 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-19
Identity = 68/216 (31.48%), Postives = 103/216 (47.69%), Query Frame = 0


Query: 20   WIYICNRTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQGAR--- 79
            W  +  +     L    +  W IWNDRN+L+H   V  V++ C+W+  ++     A+   
Sbjct: 1219 WSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSN 1278

Query: 80   -----QQSGRQVMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASL 139
                 Q + R V+   R S  +S    + L+ DAAC   G  +  G +IR+    L+A+ 
Sbjct: 1279 YSPRTQSNHRPVVQYWRPSSSVS----LKLNTDAACR--GASTSFGCIIRDSSCSLVAAT 1338

Query: 140  SQATHIYSSPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNII 199
            S       SPL AE   +LEGLK A   N   L V SDSL  I+++        D  N +
Sbjct: 1339 SIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWV 1398

Query: 200  SDIHLLCASFESIRFNHVNREYNLLAHDLARFDLSS 228
             +I  L   F  I F+H +R+ N  AH LA++ ++S
Sbjct: 1399 MEIQALTCCFAFISFSHSSRQCNRAAHGLAKWGITS 1428

[Close]

BLAST of Lcy08g014080 vs. ExPASy TrEMBL
Match: A0A7J8YQW2 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_022918 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 26  RTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQG---ARQQSGRQ 85
           + S S  +  C   WAIW DRNN VH     S   +  ++  YI E  G   ++ +S + 
Sbjct: 191 KNSESQCKMFCCSLWAIWGDRNNRVHNKVSKSGKEISRFVSSYIQELDGIGKSKVESYKS 250

Query: 86  VMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPL 145
                +  D I     + ++ DAA DE  + S  G V RN E +++ S S      +SP 
Sbjct: 251 TSKWKKPPDQI-----VKINFDAAYDEKSKESAAGIVARNNESKVLLSCSMIYKHVASPF 310

Query: 146 CAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFE 205
            AE ++  + +K       + + +  DSL++IK         +     ISDIH L +SF+
Sbjct: 311 AAETLASRKAIKTGKEMKWRKIIIEGDSLSIIKKCRSNIPVKSKVCTYISDIHKLQSSFQ 370

Query: 206 SIRFNHVNREYNLLAHDLARFDL 226
             RF HV R  N LAH +A+  L
Sbjct: 371 ECRFEHVPRAINSLAHMIAKATL 388

[Close]

BLAST of Lcy08g014080 vs. ExPASy TrEMBL
Match: A0A2P6QT88 (Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0402201 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 0


Query: 40  WAIWNDRNNLVHK----GPVPSVDYLCDWIQE--YISECQGARQQSGRQVMPLDRISDMI 99
           W IW DRNN +H+     P   +    DW +E   + E + A + + R    L+ +    
Sbjct: 367 WWIWKDRNNFIHRQTSLDPSELLRKCSDWQRELKQVWEKKQAHKHNVRSKNQLE-VKWER 426

Query: 100 SSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPLCAEAISMLEGL 159
              +   L+ D AC+  G +SGLGAVIRN+ G+L+ +L+        P   EA+++ EGL
Sbjct: 427 PPPQWCKLNFDGACEANGGNSGLGAVIRNELGELVGALAVPFAATLKPSAVEALALQEGL 486

Query: 160 KLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFESIRFNHVNREY 219
           + + +  I+ L V  D+L +I  L Q     T+   ++  + LL   FE + + HV ++ 
Sbjct: 487 RYSRLLGIRNLEVEGDALCIINSLSQTENDLTEIGAVLEGVRLLLQEFEFVNWKHVRKKA 546

Query: 220 NLLAHDLARFDLSSSYS 231
           N +AH+LAR  L S  S
Sbjct: 547 NQVAHELARSALKSVQS 562

[Close]

BLAST of Lcy08g014080 vs. ExPASy TrEMBL
Match: A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16
Identity = 71/248 (28.63%), Postives = 112/248 (45.16%), Query Frame = 0


Query: 4    LWDVTGADLLREVQNRWIY------ICNRTSTSTLERICVGAWAIWNDRNNLVHKGP--- 63
            +W V G  L  ++ +R  +      +    STS +E++    W +WNDRNN +H  P   
Sbjct: 870  VWRVAGISLNFDLVSRMSFADFLMLLSTLKSTSEMEQLLCTLWFLWNDRNNFIHGKPGLS 929

Query: 64   -----VPSVDYLCDWIQE-----YISECQGARQQSGRQVMPLDRISDMISSAEAIILHVD 123
                   SV Y C++ Q+      I +  GA  Q      PLD++           ++VD
Sbjct: 930  PTQLWAKSVAYFCNFQQQSTSSKSIRDSTGAAAQPHWISPPLDKLK----------MNVD 989

Query: 124  AACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPLCAEAISMLEGLKLANVWNIQCL 183
            AACD      G+G +IRN  GQ++A+ S+       P   EA ++L G+  A   N+   
Sbjct: 990  AACDISRNKIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKALLIGINWAARCNLSIN 1049

Query: 184  TVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFESIRFNHVNREYNLLAHDLARFD 233
               SDSL L+  +   S   +   +++ DI    +   S+  +HV R+ N  AH LA+  
Sbjct: 1050 LFESDSLILVNSINSISNAISSFGDLVLDIKNRLSYLSSVCVSHVKRDANQAAHGLAKHA 1107

[Close]

BLAST of Lcy08g014080 vs. ExPASy TrEMBL
Match: A0A803P1A9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16
Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 0


Query: 22   YICNRTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQGARQQS-- 81
            Y+      + LERI    W IW++RN  +H       + +C +   Y+++ + A   +  
Sbjct: 1164 YLATVNKDADLERIICIMWCIWSERNKEIHGSKPKIAEVICSYSYSYLAQYRKATAVAIP 1223

Query: 82   GRQVMPLDRISDMISSA-------------EAIILHVDAACDEVGRHSGLGAVIRNKEGQ 141
             +    ++  +   SS+             +   L++DA  D  G   G+GA+IR  EG 
Sbjct: 1224 SQTTAAINCNNQSTSSSFKQTISKWKPPGKDMYKLNIDATIDSNGAIIGVGALIRTDEGV 1283

Query: 142  LIASLSQATHIYSSPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKIL--LQGSRCP 201
            ++A LS+A   Y SP   EA++M   L+ A +       +  DSL LI  L  L  ++C 
Sbjct: 1284 VVAGLSKALKGYCSPKEMEALAMFYSLQWALMHQFPLHFIEFDSLLLINALNCLSSTKCI 1343

Query: 202  TDCSNIISDIHLLCASFESIRFNHVNREYNLLAHDLARFDL 226
            T   +++ DI+ L + F  ++ +HV R+ N  AHDLA+F L
Sbjct: 1344 TPFHDLVEDINYLMSFFPRVKVSHVKRDANQAAHDLAKFAL 1384

[Close]

BLAST of Lcy08g014080 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-18
Identity = 68/216 (31.48%), Postives = 103/216 (47.69%), Query Frame = 0


Query: 20   WIYICNRTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQGAR--- 79
            W  +  +     L    +  W IWNDRN+L+H   V  V++ C+W+  ++     A+   
Sbjct: 1219 WSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSN 1278

Query: 80   -----QQSGRQVMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASL 139
                 Q + R V+   R S  +S    + L+ DAAC   G  +  G +IR+    L+A+ 
Sbjct: 1279 YSPRTQSNHRPVVQYWRPSSSVS----LKLNTDAACR--GASTSFGCIIRDSSCSLVAAT 1338

Query: 140  SQATHIYSSPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNII 199
            S       SPL AE   +LEGLK A   N   L V SDSL  I+++        D  N +
Sbjct: 1339 SIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWV 1398

Query: 200  SDIHLLCASFESIRFNHVNREYNLLAHDLARFDLSS 228
             +I  L   F  I F+H +R+ N  AH LA++ ++S
Sbjct: 1399 MEIQALTCCFAFISFSHSSRQCNRAAHGLAKWGITS 1428

[Close]

BLAST of Lcy08g014080 vs. NCBI nr
Match: MBA0701905.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-17
Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 26  RTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQG---ARQQSGRQ 85
           + S S  +  C   WAIW DRNN VH     S   +  ++  YI E  G   ++ +S + 
Sbjct: 191 KNSESQCKMFCCSLWAIWGDRNNRVHNKVSKSGKEISRFVSSYIQELDGIGKSKVESYKS 250

Query: 86  VMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPL 145
                +  D I     + ++ DAA DE  + S  G V RN E +++ S S      +SP 
Sbjct: 251 TSKWKKPPDQI-----VKINFDAAYDEKSKESAAGIVARNNESKVLLSCSMIYKHVASPF 310

Query: 146 CAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFE 205
            AE ++  + +K       + + +  DSL++IK         +     ISDIH L +SF+
Sbjct: 311 AAETLASRKAIKTGKEMKWRKIIIEGDSLSIIKKCRSNIPVKSKVCTYISDIHKLQSSFQ 370

Query: 206 SIRFNHVNREYNLLAHDLARFDL 226
             RF HV R  N LAH +A+  L
Sbjct: 371 ECRFEHVPRAINSLAHMIAKATL 388

[Close]

BLAST of Lcy08g014080 vs. NCBI nr
Match: PRQ37402.1 (putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis])

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-16
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 0


Query: 40  WAIWNDRNNLVHK----GPVPSVDYLCDWIQE--YISECQGARQQSGRQVMPLDRISDMI 99
           W IW DRNN +H+     P   +    DW +E   + E + A + + R    L+ +    
Sbjct: 367 WWIWKDRNNFIHRQTSLDPSELLRKCSDWQRELKQVWEKKQAHKHNVRSKNQLE-VKWER 426

Query: 100 SSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYSSPLCAEAISMLEGL 159
              +   L+ D AC+  G +SGLGAVIRN+ G+L+ +L+        P   EA+++ EGL
Sbjct: 427 PPPQWCKLNFDGACEANGGNSGLGAVIRNELGELVGALAVPFAATLKPSAVEALALQEGL 486

Query: 160 KLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCASFESIRFNHVNREY 219
           + + +  I+ L V  D+L +I  L Q     T+   ++  + LL   FE + + HV ++ 
Sbjct: 487 RYSRLLGIRNLEVEGDALCIINSLSQTENDLTEIGAVLEGVRLLLQEFEFVNWKHVRKKA 546

Query: 220 NLLAHDLARFDLSSSYS 231
           N +AH+LAR  L S  S
Sbjct: 547 NQVAHELARSALKSVQS 562

[Close]

BLAST of Lcy08g014080 vs. NCBI nr
Match: XP_030975730.1 (uncharacterized protein LOC115995344 [Quercus lobata])

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-16
Identity = 70/218 (32.11%), Postives = 108/218 (49.54%), Query Frame = 0


Query: 20  WIYICNRTSTSTLERI-CV------------GAWAIWNDRNNLVHKGPVPSVDYLCDWIQ 79
           W + C + +TS ++ I CV             AWAIWN RNNL    P   ++ L    Q
Sbjct: 41  WNHSCLKQATSFIDLIGCVFADNRDPTLFSMVAWAIWNRRNNLRLGKPAAPLNELIPQAQ 100

Query: 80  EYISECQGARQQSGRQVMPLDR--ISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKE 139
           + + E    +  +   ++P+ R   S    S+    ++ D A   V   +GLG VIRN E
Sbjct: 101 DRMRE---FKLYNFSTIIPVGRPPTSWQAPSSNIYKVNFDGAQFVVENSAGLGVVIRNSE 160

Query: 140 GQLIASLSQATHIYSSPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCP 199
           GQ++ SLS+ T +  + +  EA++    LKLA     Q +T+  DS  LI  L+  +   
Sbjct: 161 GQVMLSLSEKTPLPFTAIEVEAMAARRALKLALETGFQQITLEGDSQILISALVNNTHSL 220

Query: 200 TDCSNIISDIHLLCASFESIRFNHVNREYNLLAHDLAR 223
           +   +I+ DI  L + F +I ++HV R  N +AH LAR
Sbjct: 221 SSFGHILKDIQFLASCFSTINYSHVRRHCNTVAHSLAR 255

[Close]

BLAST of Lcy08g014080 vs. NCBI nr
Match: XP_012487919.1 (PREDICTED: uncharacterized protein LOC105801131 [Gossypium raimondii])

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-16
Identity = 62/206 (30.10%), Postives = 96/206 (46.60%), Query Frame = 0


Query: 23  ICNRTSTSTLERICVGAWAIWNDRNNLVHKGPVPSVDYLCDWIQEYISECQG---ARQQS 82
           + ++ S S     C   WAIW DRNN VH     S   +  ++  YI+E  G   ++ QS
Sbjct: 49  VFSKNSESQCRIFCYALWAIWGDRNNKVHNKVSKSGKEIGRFVSSYITELDGIGKSKAQS 108

Query: 83  GRQVMPLDRISDMISSAEAIILHVDAACDEVGRHSGLGAVIRNKEGQLIASLSQATHIYS 142
            +      +  D I     + ++ DAA D   + S  G V RN EG+++ S        +
Sbjct: 109 YKLTSKWKKPHDQI-----VKINFDAAYDGKSKQSAAGIVTRNNEGKVLLSCLMIYQQVA 168

Query: 143 SPLCAEAISMLEGLKLANVWNIQCLTVCSDSLALIKILLQGSRCPTDCSNIISDIHLLCA 202
           SP  AEA++  + +K+      + + +  DSL++IK         +     ISDIH L +
Sbjct: 169 SPFAAEALASRKAIKIGKEMKWRKIIIEGDSLSIIKKCRSNIPDKSQVCAYISDIHKLQS 228

Query: 203 SFESIRFNHVNREYNLLAHDLARFDL 226
            F+  RF HV R  N L H +A+  L
Sbjct: 229 RFQECRFEHVPRTVNSLVHTIAKATL 249

The following BLAST results are available for this feature:

BLAST of Lcy08g014080 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g014080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	6.7e-19	31.48	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A7J8YQW2	2.1e-17	31.03	Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_022918 PE=4 SV=1	[more]
A0A2P6QT88	1.8e-16	31.98	Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-c...	[more]
A0A803NGI9	1.8e-16	28.63	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803P1A9	1.8e-16	28.96	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lcy08g014080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	1.4e-18	31.48	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
MBA0701905.1	4.4e-17	31.03	hypothetical protein [Gossypium aridum]	[more]
PRQ37402.1	3.8e-16	31.98	putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-c...	[more]
XP_030975730.1	6.4e-16	32.11	uncharacterized protein LOC115995344 [Quercus lobata]	[more]
XP_012487919.1	6.4e-16	30.10	PREDICTED: uncharacterized protein LOC105801131 [Gossypium raimondii]	[more]

BLAST of Lcy08g014080 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 103..222 e-value: 1.4E-19 score: 70.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 97..225 e-value: 1.8E-17 score: 65.6
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 98..225
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 101..222 e-value: 7.67937E-21 score: 82.362
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 99..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g014080.1	Lcy08g014080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity