Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATGTCCATTCCAAGTAAAATTAAAATTTTTCTCTGGCGTTTGTGTTTGGATCGATTACCGACAGCGGTGAATTTGGCTTTTCAGAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA
mRNA sequence
ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA
Coding sequence (CDS)
ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA
Protein sequence
MTGPSLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPPFMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMGLLSDCR
Homology
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 3.1e-40
Identity = 122/333 (36.64%), Postives = 169/333 (50.75%), Query Frame = 0
Query: 4 PSLQIRSPPSLSLDIKVSSLLS-ASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 63
P+L+I S P L L +VSSL+ G W V F+P+E + +LSIP+G D I
Sbjct: 737 PTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLI 796
Query: 64 WHYEANGILSVRSGYRLAQSIDLC-SIPSSSSS-SFSCWWKGMWKIILMFPPIVF---LV 123
W+YE G+ SVRSGY++A + C PSSSSS CWW G WK+ + VF L
Sbjct: 797 WNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLC 856
Query: 124 ADRVNPPFMCSGSVKPLVVNERCQNFG-----------------YLW-QSDFLGLAPSIF 183
DR+ P C+ S + + + C G LW S F L+P F
Sbjct: 857 LDRL--PTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSP--F 916
Query: 184 HLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLV-------PAWYRAEDFLQL 243
+L E + L ++FE + V +W LWN RN F S V W A +
Sbjct: 917 LILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEW--ANKYAME 976
Query: 244 FSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVL 303
F A+S R + + + + W PP EG+YK+N DASFL+ + A GII+ + GQV+
Sbjct: 977 FREAKSNPITGRVT--NTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVM 1036
Query: 304 LSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
+ATK+ + SVD+AE A EGL LA E+G+
Sbjct: 1037 AAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match:
A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 95/327 (29.05%), Postives = 141/327 (43.12%), Query Frame = 0
Query: 7 QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
+I SPP L L V L ++SGQW+ + F +EV + L IP+ + G D IWHYE
Sbjct: 879 KIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYE 938
Query: 67 ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIIL--------------MF 126
NG+ SV+SGYRLA + + PS S +WK +W + +
Sbjct: 939 RNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFL 998
Query: 127 PPIVFLVADRVNPPFMCSG----SVKPLVVNERCQNFGYLWQSDFLG------LAPSIFH 186
P L ++ P +C + L C+ +W++ G S
Sbjct: 999 PCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRE 1058
Query: 187 LLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQ-- 246
L +Q E A W LWN RN + F+G S+ +R Q FS A
Sbjct: 1059 LWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNL 1118
Query: 247 SALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATK 305
S R S A W PP G+YK+NVD + SG+++ G++VR+++G+ + + +
Sbjct: 1119 SHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVR 1178
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match:
A0A6J1D5K1 (uncharacterized protein LOC111017816 OS=Momordica charantia OX=3673 GN=LOC111017816 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 4.1e-24
Identity = 93/303 (30.69%), Postives = 141/303 (46.53%), Query Frame = 0
Query: 5 SLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWH 64
+L + SPP L L VS+L+SASG W+ G + AF E +L IPVG +D +IWH
Sbjct: 458 NLHVHSPPRLPLSSIVSTLISASGGWNEGIIRGAFDEGEASLILRIPVGVDTTSDMRIWH 517
Query: 65 YEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 124
Y++ G+ +++S Y + QS LC + S+SSS D ++
Sbjct: 518 YDSKGLFTIKSRYWVDQSRLLCRVSSASSSDVRS-------------------EDLLHTL 577
Query: 125 FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 184
+ C V+ + + +S +I L + ++ L W + +AV LW +
Sbjct: 578 WFCKVVVRVWKASRVRYQLPQVVRS-------TIMTFLWDCKEVLDWDDMRELAVILWAI 637
Query: 185 WNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYK 244
W+ RN W F VP ED + +A +Q F +A ++
Sbjct: 638 WSLRNDWVFNKVSRHVP-----EDI-----GSWAAAFMQEFRRANARTLD-------DIS 697
Query: 245 VNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMG 304
+V ASF ++G RD GQV+LSA +++VDLAE A K GL+LAR+MG
Sbjct: 698 CHVSASFACLLETSSG----RDCRGQVMLSAATRVLDMANVDLAEASAAKWGLDLARDMG 713
Query: 305 LLS 308
L S
Sbjct: 758 LNS 713
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match:
A0A6J5TGK7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2532 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 7.8e-23
Identity = 89/303 (29.37%), Postives = 133/303 (43.89%), Query Frame = 0
Query: 7 QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
+I S P L L V L ++SGQW+ + F +EV ++L IP+ + D IWHYE
Sbjct: 1340 KIMSAPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVEAILQIPLVSLASHDCLIWHYE 1399
Query: 67 ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 126
NG+ SV+SGY+L + +C S+ + S +WK +W L P + R
Sbjct: 1400 RNGMYSVKSGYQLTRLEKDIMCGESSAGVNLSSRFWKKIW--ALKIPNKIKFFLWRRCGA 1459
Query: 127 FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 186
G+V + R +F LW + +Q G E A W L
Sbjct: 1460 TQLGGNVCEV---SRVNSFRELWYA---------------VQISSGGEEQGLFAYLRWGL 1519
Query: 187 WNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQSALCVQ--RFSGGDASSVSWTPPAEG 246
WN R+ F+ S+ +R Q F ++ R S AS W PPA G
Sbjct: 1520 WNWRDSLIFEAKSETATQLLHRMHTLAQEFFDVNNSSHTSHGRQSSPQASLHVWRPPAVG 1579
Query: 247 VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAR 305
+YK+NVD + SG++I G++VR+ +G + + + E A EGL A
Sbjct: 1580 IYKINVDRALKSGDSIRGVGVVVRNENGDFMAACVRRIQASYGARQMELMATIEGLRFAI 1622
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match:
A0A5B7A5C8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 6.6e-22
Identity = 90/337 (26.71%), Postives = 145/337 (43.03%), Query Frame = 0
Query: 5 SLQIRSPPSLSLD-IKVSSLLSASG-QWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 64
+ ++ SP SL+ + VS L+ +SG +W +S+ P +V + IP+ + D +
Sbjct: 170 TFKVVSPCVASLENMLVSDLIDSSGMRWKKELISSLLLPIDVADICKIPLSIHAAPDCVV 229
Query: 65 WHYEANGILSVRSGYRLAQSIDLCSIPSSSSSS-------FSCWWKGMWK---------- 124
WH+ +G+ SVRS Y +A +D+ +S S WK +W
Sbjct: 230 WHFSKHGVFSVRSAYPVA--VDILKKRNSFEESECSNREIMDKLWKTLWSLSIPNKIKIF 289
Query: 125 ----IILMFPPIVFLVADRVNPPFMC----SGSVKPLVVNERCQNFGYLWQSDFLGLAP- 184
I+ + P L + F C + P+ + +C +W++ L
Sbjct: 290 LWRAIVDILPTGTKLAQRHIPVDFRCKLCGDQAETPVHLFTQCAWVRIVWENFVFHLPKD 349
Query: 185 -------SIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPL-VPAWYRAED 244
+F LC L +E E + LW +W +RN G V + A
Sbjct: 350 KCFLDFCQLFEFLC---SSLDMAEVEVCCIMLWLVWGHRNAIVHSGRGRFPVGVFSDALQ 409
Query: 245 FLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSD 304
+L+ F AQ + V S SW PP +GVYK+N+D S+L GEN G ++RD
Sbjct: 410 YLKEFQDAQHKMGVVPLRPVGVGSASWMPPVDGVYKLNIDGSWLPGENTGGVGGVIRDWK 469
Query: 305 GQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
G+V+ K S D A+ AI G+ AR++G+
Sbjct: 470 GEVIGGFAKPLIQCVSADHAKAMAILHGILFARDIGI 501
BLAST of Lcy08g014000 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 175.6 bits (444), Expect = 6.5e-40
Identity = 122/333 (36.64%), Postives = 169/333 (50.75%), Query Frame = 0
Query: 4 PSLQIRSPPSLSLDIKVSSLLS-ASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 63
P+L+I S P L L +VSSL+ G W V F+P+E + +LSIP+G D I
Sbjct: 737 PTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLI 796
Query: 64 WHYEANGILSVRSGYRLAQSIDLC-SIPSSSSS-SFSCWWKGMWKIILMFPPIVF---LV 123
W+YE G+ SVRSGY++A + C PSSSSS CWW G WK+ + VF L
Sbjct: 797 WNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLC 856
Query: 124 ADRVNPPFMCSGSVKPLVVNERCQNFG-----------------YLW-QSDFLGLAPSIF 183
DR+ P C+ S + + + C G LW S F L+P F
Sbjct: 857 LDRL--PTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSP--F 916
Query: 184 HLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLV-------PAWYRAEDFLQL 243
+L E + L ++FE + V +W LWN RN F S V W A +
Sbjct: 917 LILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEW--ANKYAME 976
Query: 244 FSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVL 303
F A+S R + + + + W PP EG+YK+N DASFL+ + A GII+ + GQV+
Sbjct: 977 FREAKSNPITGRVT--NTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVM 1036
Query: 304 LSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
+ATK+ + SVD+AE A EGL LA E+G+
Sbjct: 1037 AAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061
BLAST of Lcy08g014000 vs. NCBI nr
Match:
VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])
HSP 1 Score: 125.9 bits (315), Expect = 5.9e-25
Identity = 95/327 (29.05%), Postives = 141/327 (43.12%), Query Frame = 0
Query: 7 QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
+I SPP L L V L ++SGQW+ + F +EV + L IP+ + G D IWHYE
Sbjct: 879 KIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYE 938
Query: 67 ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIIL--------------MF 126
NG+ SV+SGYRLA + + PS S +WK +W + +
Sbjct: 939 RNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFL 998
Query: 127 PPIVFLVADRVNPPFMCSG----SVKPLVVNERCQNFGYLWQSDFLG------LAPSIFH 186
P L ++ P +C + L C+ +W++ G S
Sbjct: 999 PCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRE 1058
Query: 187 LLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQ-- 246
L +Q E A W LWN RN + F+G S+ +R Q FS A
Sbjct: 1059 LWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNL 1118
Query: 247 SALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATK 305
S R S A W PP G+YK+NVD + SG+++ G++VR+++G+ + + +
Sbjct: 1119 SHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVR 1178
BLAST of Lcy08g014000 vs. NCBI nr
Match:
XP_022149385.1 (uncharacterized protein LOC111017816 [Momordica charantia])
HSP 1 Score: 122.1 bits (305), Expect = 8.5e-24
Identity = 93/303 (30.69%), Postives = 141/303 (46.53%), Query Frame = 0
Query: 5 SLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWH 64
+L + SPP L L VS+L+SASG W+ G + AF E +L IPVG +D +IWH
Sbjct: 458 NLHVHSPPRLPLSSIVSTLISASGGWNEGIIRGAFDEGEASLILRIPVGVDTTSDMRIWH 517
Query: 65 YEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 124
Y++ G+ +++S Y + QS LC + S+SSS D ++
Sbjct: 518 YDSKGLFTIKSRYWVDQSRLLCRVSSASSSDVRS-------------------EDLLHTL 577
Query: 125 FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 184
+ C V+ + + +S +I L + ++ L W + +AV LW +
Sbjct: 578 WFCKVVVRVWKASRVRYQLPQVVRS-------TIMTFLWDCKEVLDWDDMRELAVILWAI 637
Query: 185 WNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYK 244
W+ RN W F VP ED + +A +Q F +A ++
Sbjct: 638 WSLRNDWVFNKVSRHVP-----EDI-----GSWAAAFMQEFRRANARTLD-------DIS 697
Query: 245 VNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMG 304
+V ASF ++G RD GQV+LSA +++VDLAE A K GL+LAR+MG
Sbjct: 698 CHVSASFACLLETSSG----RDCRGQVMLSAATRVLDMANVDLAEASAAKWGLDLARDMG 713
Query: 305 LLS 308
L S
Sbjct: 758 LNS 713
BLAST of Lcy08g014000 vs. NCBI nr
Match:
XP_024046732.1 (uncharacterized protein LOC112101057 [Citrus clementina])
HSP 1 Score: 120.6 bits (301), Expect = 2.5e-23
Identity = 84/304 (27.63%), Postives = 143/304 (47.04%), Query Frame = 0
Query: 12 PSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGIL 71
PSL + KV+ L+ + QW+ + F+ E + SIP+ Y D ++WHY+ G
Sbjct: 18 PSLLANSKVADLIGSDHQWNNILIEQHFAKEVAEVIKSIPLPRYPKNDERVWHYDKKGFY 77
Query: 72 SVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPPFMCSGSV 131
+V+SGY++A + P+SS+ S +++ +M PI + V F
Sbjct: 78 TVKSGYQVALKLKYVEAPTSSTES-------LFRRKIMQEPICQVCKSGVEDAFHAFMEC 137
Query: 132 KPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFW 191
K V + + YL + I ++ + ++ E E +AV W++W+ RN
Sbjct: 138 K---VARKVWKYSYLASEMQEVVREGILSVMQSLIKKMSMREVEFVAVVWWEIWHARNKL 197
Query: 192 KFQGSDPLVPAWYRAEDFLQLFSAAQSAL-CVQRFSGGDASSV---------SWTPPAEG 251
F+G + + + L + AQ+A+ QR G + +S W PP G
Sbjct: 198 IFEG---------KRVNPMSLIAKAQAAVEAYQRVHGKEQTSKRSEDVSKQDQWCPPPVG 257
Query: 252 VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAR 306
YKVNVDA+ + + + G+++R+ GQV+++A K +V AE A+K GL +A
Sbjct: 258 FYKVNVDAAVHTEQQLTGLGVVIRNPQGQVIVTAVKSTKFQDNVTAAEAEAVKWGLEIAL 302
BLAST of Lcy08g014000 vs. NCBI nr
Match:
KAF4364303.1 (hypothetical protein G4B88_028423 [Cannabis sativa])
HSP 1 Score: 119.4 bits (298), Expect = 5.5e-23
Identity = 95/306 (31.05%), Postives = 144/306 (47.06%), Query Frame = 0
Query: 11 PPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGI 70
PPSL+ VS+LL +G W+ + A+F + V +LS+P D W + +G
Sbjct: 343 PPSLT---HVSTLLLPNGDWNIPLLRASFQQDTVNDILSLPPPDPSKPDTYFWQHSTSGH 402
Query: 71 LSVRSGYRLA-QSIDLCSIPSSSSSSFSCWWKGMWKIILMFPP----IVFLVADRVNPPF 130
SVR+GY +A Q+I+ SS++ + + WWK +W+ L PP V+ +A P
Sbjct: 403 YSVRTGYHVAKQAINRVQPSSSNTETLTRWWKSLWR--LPIPPKIRHFVYRLAQHSLP-- 462
Query: 131 MCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQD-RLGWS-EFEAMAVFLWQ 190
+ N C + + S+ H L E Q+ + WS EF LW+
Sbjct: 463 -----TTNNLYNRHCISSPICPKCSL--CFESVQHALFECQEMKKAWSDEFNLFLCMLWK 522
Query: 191 LWNNRN--FWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEG 250
WN RN ++ Q S P A+D+L + AAQ S D + W PP G
Sbjct: 523 CWNARNASVFRNQVSRP-ETIEQEAQDYLAFYQAAQDKRWNHSQSTSDRDLLVWEPPPVG 582
Query: 251 VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKF--FGVLSSVDLAEGFAIKEGLNL 306
K+N DA+ S +N GG +VRD G++ ++AT F G L AEG+A+ E L
Sbjct: 583 FLKLNTDAAISSHQNRTGGGALVRDHTGKI-IAATAFNRIGQLHP-QAAEGWALLEALKW 631
BLAST of Lcy08g014000 vs. TAIR 10
Match:
AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )
HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 32/92 (34.78%), Postives = 45/92 (48.91%), Query Frame = 0
Query: 181 LWQLWNNRNFWKFQGSD-PLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSV-SWTPP 240
LW+LWN+RN FQ P A+ LQ ++ A + + S + +W P
Sbjct: 447 LWRLWNSRNILYFQRRHVPWETTLQLAQMDLQEWNEAVTPSHINSHGTTIRSHIPNWRRP 506
Query: 241 AEGVYKVNVDASFLSGENIAAGGIIVRDSDGQ 271
G K NVD SF++G GG IVRD +G+
Sbjct: 507 TNGWVKCNVDGSFINGNIPGKGGWIVRDHNGR 538
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DAR4 | 3.1e-40 | 36.64 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A5E4FZN9 | 2.8e-25 | 29.05 | PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1 | [more] |
A0A6J1D5K1 | 4.1e-24 | 30.69 | uncharacterized protein LOC111017816 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J5TGK7 | 7.8e-23 | 29.37 | CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS... | [more] |
A0A5B7A5C8 | 6.6e-22 | 26.71 | Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G33160.1 | 1.9e-05 | 34.78 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro... | [more] |