Lcy08g014000 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g014000
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr08: 44177780 .. 44178794 (+)
RNA-Seq ExpressionLcy08g014000
SyntenyLcy08g014000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATGTCCATTCCAAGTAAAATTAAAATTTTTCTCTGGCGTTTGTGTTTGGATCGATTACCGACAGCGGTGAATTTGGCTTTTCAGAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA

mRNA sequence

ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA

Coding sequence (CDS)

ATGACAGGGCCATCCCTTCAGATTCGCTCTCCCCCCTCTTTGTCGTTGGATATCAAGGTCAGTTCTCTGTTGTCTGCGTCTGGCCAGTGGGATTATGGGAAGGTTAGTGCTGCCTTTTCGCCAGAGGAAGTTCGGTCAGTCTTGTCTATACCGGTGGGGGCATATGTGGGAGCCGATGGGCAAATATGGCATTATGAAGCGAATGGAATCTTATCGGTTCGCAGTGGGTATCGTTTGGCCCAGTCGATTGATCTGTGCTCTATTCCCTCATCGTCTTCTTCCTCTTTTTCTTGCTGGTGGAAAGGTATGTGGAAGATAATATTGATGTTCCCTCCCATTGTGTTTCTTGTGGCCGATCGGGTGAATCCTCCCTTCATGTGTTCTGGCTCTGTAAAACCGCTCGTCGTGAATGAGCGGTGTCAAAATTTTGGGTATCTTTGGCAGTCGGATTTCTTGGGTCTGGCTCCTTCGATTTTCCATCTTCTCTGTGAGATTCAAGATCGTCTCGGTTGGTCAGAATTTGAAGCAATGGCGGTGTTCTTGTGGCAGCTCTGGAATAATCGAAATTTCTGGAAGTTCCAGGGGTCCGATCCTTTAGTTCCGGCTTGGTATCGAGCGGAAGATTTCTTACAATTGTTCAGCGCCGCCCAGTCAGCATTGTGTGTGCAGCGTTTCTCTGGTGGTGACGCTTCCTCTGTTTCGTGGACTCCTCCTGCTGAAGGGGTTTATAAAGTTAACGTTGATGCAAGCTTTCTGTCTGGGGAGAACATTGCCGCCGGTGGGATTATCGTTCGTGATAGTGACGGTCAGGTTCTTCTCTCTGCTACAAAATTCTTCGGGGTGCTTTCCTCGGTGGATTTGGCTGAAGGTTTTGCAATTAAAGAGGGGCTAAACTTGGCGCGGGAGATGGGGCTTTTATCCGATTGTCGTTGA

Protein sequence

MTGPSLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPPFMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMGLLSDCR
Homology
BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-40
Identity = 122/333 (36.64%), Postives = 169/333 (50.75%), Query Frame = 0

Query: 4    PSLQIRSPPSLSLDIKVSSLLS-ASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 63
            P+L+I S P L L  +VSSL+    G W    V   F+P+E + +LSIP+G     D  I
Sbjct: 737  PTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLI 796

Query: 64   WHYEANGILSVRSGYRLAQSIDLC-SIPSSSSS-SFSCWWKGMWKIILMFPPIVF---LV 123
            W+YE  G+ SVRSGY++A   + C   PSSSSS    CWW G WK+ +     VF   L 
Sbjct: 797  WNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLC 856

Query: 124  ADRVNPPFMCSGSVKPLVVNERCQNFG-----------------YLW-QSDFLGLAPSIF 183
             DR+  P  C+ S + + +   C   G                  LW  S F  L+P  F
Sbjct: 857  LDRL--PTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSP--F 916

Query: 184  HLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLV-------PAWYRAEDFLQL 243
             +L E  + L  ++FE + V +W LWN RN   F  S   V         W  A  +   
Sbjct: 917  LILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEW--ANKYAME 976

Query: 244  FSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVL 303
            F  A+S     R +  + + + W PP EG+YK+N DASFL+ +  A  GII+ +  GQV+
Sbjct: 977  FREAKSNPITGRVT--NTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVM 1036

Query: 304  LSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
             +ATK+   + SVD+AE  A  EGL LA E+G+
Sbjct: 1037 AAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061

BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 95/327 (29.05%), Postives = 141/327 (43.12%), Query Frame = 0

Query: 7    QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
            +I SPP L L   V  L ++SGQW+   +   F  +EV + L IP+ +  G D  IWHYE
Sbjct: 879  KIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYE 938

Query: 67   ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIIL--------------MF 126
             NG+ SV+SGYRLA  +   +   PS      S +WK +W + +                
Sbjct: 939  RNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFL 998

Query: 127  PPIVFLVADRVNPPFMCSG----SVKPLVVNERCQNFGYLWQSDFLG------LAPSIFH 186
            P    L   ++ P  +C      +   L     C+    +W++   G         S   
Sbjct: 999  PCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRE 1058

Query: 187  LLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQ-- 246
            L   +Q      E    A   W LWN RN + F+G S+      +R     Q FS A   
Sbjct: 1059 LWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNL 1118

Query: 247  SALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATK 305
            S     R S   A    W PP  G+YK+NVD +  SG+++   G++VR+++G+ + +  +
Sbjct: 1119 SHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVR 1178

BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match: A0A6J1D5K1 (uncharacterized protein LOC111017816 OS=Momordica charantia OX=3673 GN=LOC111017816 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-24
Identity = 93/303 (30.69%), Postives = 141/303 (46.53%), Query Frame = 0

Query: 5   SLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWH 64
           +L + SPP L L   VS+L+SASG W+ G +  AF   E   +L IPVG    +D +IWH
Sbjct: 458 NLHVHSPPRLPLSSIVSTLISASGGWNEGIIRGAFDEGEASLILRIPVGVDTTSDMRIWH 517

Query: 65  YEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 124
           Y++ G+ +++S Y + QS  LC + S+SSS                        D ++  
Sbjct: 518 YDSKGLFTIKSRYWVDQSRLLCRVSSASSSDVRS-------------------EDLLHTL 577

Query: 125 FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 184
           + C   V+    +        + +S       +I   L + ++ L W +   +AV LW +
Sbjct: 578 WFCKVVVRVWKASRVRYQLPQVVRS-------TIMTFLWDCKEVLDWDDMRELAVILWAI 637

Query: 185 WNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYK 244
           W+ RN W F      VP     ED       + +A  +Q F   +A ++           
Sbjct: 638 WSLRNDWVFNKVSRHVP-----EDI-----GSWAAAFMQEFRRANARTLD-------DIS 697

Query: 245 VNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMG 304
            +V ASF      ++G    RD  GQV+LSA      +++VDLAE  A K GL+LAR+MG
Sbjct: 698 CHVSASFACLLETSSG----RDCRGQVMLSAATRVLDMANVDLAEASAAKWGLDLARDMG 713

Query: 305 LLS 308
           L S
Sbjct: 758 LNS 713

BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match: A0A6J5TGK7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2532 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-23
Identity = 89/303 (29.37%), Postives = 133/303 (43.89%), Query Frame = 0

Query: 7    QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
            +I S P L L   V  L ++SGQW+   +   F  +EV ++L IP+ +    D  IWHYE
Sbjct: 1340 KIMSAPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVEAILQIPLVSLASHDCLIWHYE 1399

Query: 67   ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 126
             NG+ SV+SGY+L   +   +C   S+  +  S +WK +W   L  P  +     R    
Sbjct: 1400 RNGMYSVKSGYQLTRLEKDIMCGESSAGVNLSSRFWKKIW--ALKIPNKIKFFLWRRCGA 1459

Query: 127  FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 186
                G+V  +    R  +F  LW +               +Q   G  E    A   W L
Sbjct: 1460 TQLGGNVCEV---SRVNSFRELWYA---------------VQISSGGEEQGLFAYLRWGL 1519

Query: 187  WNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQSALCVQ--RFSGGDASSVSWTPPAEG 246
            WN R+   F+  S+      +R     Q F    ++      R S   AS   W PPA G
Sbjct: 1520 WNWRDSLIFEAKSETATQLLHRMHTLAQEFFDVNNSSHTSHGRQSSPQASLHVWRPPAVG 1579

Query: 247  VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAR 305
            +YK+NVD +  SG++I   G++VR+ +G  + +  +           E  A  EGL  A 
Sbjct: 1580 IYKINVDRALKSGDSIRGVGVVVRNENGDFMAACVRRIQASYGARQMELMATIEGLRFAI 1622

BLAST of Lcy08g014000 vs. ExPASy TrEMBL
Match: A0A5B7A5C8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-22
Identity = 90/337 (26.71%), Postives = 145/337 (43.03%), Query Frame = 0

Query: 5   SLQIRSPPSLSLD-IKVSSLLSASG-QWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 64
           + ++ SP   SL+ + VS L+ +SG +W    +S+   P +V  +  IP+  +   D  +
Sbjct: 170 TFKVVSPCVASLENMLVSDLIDSSGMRWKKELISSLLLPIDVADICKIPLSIHAAPDCVV 229

Query: 65  WHYEANGILSVRSGYRLAQSIDLCSIPSSSSSS-------FSCWWKGMWK---------- 124
           WH+  +G+ SVRS Y +A  +D+    +S   S           WK +W           
Sbjct: 230 WHFSKHGVFSVRSAYPVA--VDILKKRNSFEESECSNREIMDKLWKTLWSLSIPNKIKIF 289

Query: 125 ----IILMFPPIVFLVADRVNPPFMC----SGSVKPLVVNERCQNFGYLWQSDFLGLAP- 184
               I+ + P    L    +   F C      +  P+ +  +C     +W++    L   
Sbjct: 290 LWRAIVDILPTGTKLAQRHIPVDFRCKLCGDQAETPVHLFTQCAWVRIVWENFVFHLPKD 349

Query: 185 -------SIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPL-VPAWYRAED 244
                   +F  LC     L  +E E   + LW +W +RN     G     V  +  A  
Sbjct: 350 KCFLDFCQLFEFLC---SSLDMAEVEVCCIMLWLVWGHRNAIVHSGRGRFPVGVFSDALQ 409

Query: 245 FLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSD 304
           +L+ F  AQ  + V         S SW PP +GVYK+N+D S+L GEN    G ++RD  
Sbjct: 410 YLKEFQDAQHKMGVVPLRPVGVGSASWMPPVDGVYKLNIDGSWLPGENTGGVGGVIRDWK 469

Query: 305 GQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
           G+V+    K      S D A+  AI  G+  AR++G+
Sbjct: 470 GEVIGGFAKPLIQCVSADHAKAMAILHGILFARDIGI 501

BLAST of Lcy08g014000 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 6.5e-40
Identity = 122/333 (36.64%), Postives = 169/333 (50.75%), Query Frame = 0

Query: 4    PSLQIRSPPSLSLDIKVSSLLS-ASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQI 63
            P+L+I S P L L  +VSSL+    G W    V   F+P+E + +LSIP+G     D  I
Sbjct: 737  PTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLI 796

Query: 64   WHYEANGILSVRSGYRLAQSIDLC-SIPSSSSS-SFSCWWKGMWKIILMFPPIVF---LV 123
            W+YE  G+ SVRSGY++A   + C   PSSSSS    CWW G WK+ +     VF   L 
Sbjct: 797  WNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLC 856

Query: 124  ADRVNPPFMCSGSVKPLVVNERCQNFG-----------------YLW-QSDFLGLAPSIF 183
             DR+  P  C+ S + + +   C   G                  LW  S F  L+P  F
Sbjct: 857  LDRL--PTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSP--F 916

Query: 184  HLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQGSDPLV-------PAWYRAEDFLQL 243
             +L E  + L  ++FE + V +W LWN RN   F  S   V         W  A  +   
Sbjct: 917  LILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEW--ANKYAME 976

Query: 244  FSAAQSALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVL 303
            F  A+S     R +  + + + W PP EG+YK+N DASFL+ +  A  GII+ +  GQV+
Sbjct: 977  FREAKSNPITGRVT--NTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVM 1036

Query: 304  LSATKFFGVLSSVDLAEGFAIKEGLNLAREMGL 306
             +ATK+   + SVD+AE  A  EGL LA E+G+
Sbjct: 1037 AAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061

BLAST of Lcy08g014000 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 125.9 bits (315), Expect = 5.9e-25
Identity = 95/327 (29.05%), Postives = 141/327 (43.12%), Query Frame = 0

Query: 7    QIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYE 66
            +I SPP L L   V  L ++SGQW+   +   F  +EV + L IP+ +  G D  IWHYE
Sbjct: 879  KIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYE 938

Query: 67   ANGILSVRSGYRLA--QSIDLCSIPSSSSSSFSCWWKGMWKIIL--------------MF 126
             NG+ SV+SGYRLA  +   +   PS      S +WK +W + +                
Sbjct: 939  RNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFL 998

Query: 127  PPIVFLVADRVNPPFMCSG----SVKPLVVNERCQNFGYLWQSDFLG------LAPSIFH 186
            P    L   ++ P  +C      +   L     C+    +W++   G         S   
Sbjct: 999  PCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRE 1058

Query: 187  LLCEIQDRLGWSEFEAMAVFLWQLWNNRNFWKFQG-SDPLVPAWYRAEDFLQLFSAAQ-- 246
            L   +Q      E    A   W LWN RN + F+G S+      +R     Q FS A   
Sbjct: 1059 LWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNL 1118

Query: 247  SALCVQRFSGGDASSVSWTPPAEGVYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATK 305
            S     R S   A    W PP  G+YK+NVD +  SG+++   G++VR+++G+ + +  +
Sbjct: 1119 SHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVR 1178

BLAST of Lcy08g014000 vs. NCBI nr
Match: XP_022149385.1 (uncharacterized protein LOC111017816 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-24
Identity = 93/303 (30.69%), Postives = 141/303 (46.53%), Query Frame = 0

Query: 5   SLQIRSPPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWH 64
           +L + SPP L L   VS+L+SASG W+ G +  AF   E   +L IPVG    +D +IWH
Sbjct: 458 NLHVHSPPRLPLSSIVSTLISASGGWNEGIIRGAFDEGEASLILRIPVGVDTTSDMRIWH 517

Query: 65  YEANGILSVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPP 124
           Y++ G+ +++S Y + QS  LC + S+SSS                        D ++  
Sbjct: 518 YDSKGLFTIKSRYWVDQSRLLCRVSSASSSDVRS-------------------EDLLHTL 577

Query: 125 FMCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQL 184
           + C   V+    +        + +S       +I   L + ++ L W +   +AV LW +
Sbjct: 578 WFCKVVVRVWKASRVRYQLPQVVRS-------TIMTFLWDCKEVLDWDDMRELAVILWAI 637

Query: 185 WNNRNFWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEGVYK 244
           W+ RN W F      VP     ED       + +A  +Q F   +A ++           
Sbjct: 638 WSLRNDWVFNKVSRHVP-----EDI-----GSWAAAFMQEFRRANARTLD-------DIS 697

Query: 245 VNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAREMG 304
            +V ASF      ++G    RD  GQV+LSA      +++VDLAE  A K GL+LAR+MG
Sbjct: 698 CHVSASFACLLETSSG----RDCRGQVMLSAATRVLDMANVDLAEASAAKWGLDLARDMG 713

Query: 305 LLS 308
           L S
Sbjct: 758 LNS 713

BLAST of Lcy08g014000 vs. NCBI nr
Match: XP_024046732.1 (uncharacterized protein LOC112101057 [Citrus clementina])

HSP 1 Score: 120.6 bits (301), Expect = 2.5e-23
Identity = 84/304 (27.63%), Postives = 143/304 (47.04%), Query Frame = 0

Query: 12  PSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGIL 71
           PSL  + KV+ L+ +  QW+   +   F+ E    + SIP+  Y   D ++WHY+  G  
Sbjct: 18  PSLLANSKVADLIGSDHQWNNILIEQHFAKEVAEVIKSIPLPRYPKNDERVWHYDKKGFY 77

Query: 72  SVRSGYRLAQSIDLCSIPSSSSSSFSCWWKGMWKIILMFPPIVFLVADRVNPPFMCSGSV 131
           +V+SGY++A  +     P+SS+ S       +++  +M  PI  +    V   F      
Sbjct: 78  TVKSGYQVALKLKYVEAPTSSTES-------LFRRKIMQEPICQVCKSGVEDAFHAFMEC 137

Query: 132 KPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQDRLGWSEFEAMAVFLWQLWNNRNFW 191
           K   V  +   + YL       +   I  ++  +  ++   E E +AV  W++W+ RN  
Sbjct: 138 K---VARKVWKYSYLASEMQEVVREGILSVMQSLIKKMSMREVEFVAVVWWEIWHARNKL 197

Query: 192 KFQGSDPLVPAWYRAEDFLQLFSAAQSAL-CVQRFSGGDASSV---------SWTPPAEG 251
            F+G         +  + + L + AQ+A+   QR  G + +S           W PP  G
Sbjct: 198 IFEG---------KRVNPMSLIAKAQAAVEAYQRVHGKEQTSKRSEDVSKQDQWCPPPVG 257

Query: 252 VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKFFGVLSSVDLAEGFAIKEGLNLAR 306
            YKVNVDA+  + + +   G+++R+  GQV+++A K      +V  AE  A+K GL +A 
Sbjct: 258 FYKVNVDAAVHTEQQLTGLGVVIRNPQGQVIVTAVKSTKFQDNVTAAEAEAVKWGLEIAL 302

BLAST of Lcy08g014000 vs. NCBI nr
Match: KAF4364303.1 (hypothetical protein G4B88_028423 [Cannabis sativa])

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-23
Identity = 95/306 (31.05%), Postives = 144/306 (47.06%), Query Frame = 0

Query: 11  PPSLSLDIKVSSLLSASGQWDYGKVSAAFSPEEVRSVLSIPVGAYVGADGQIWHYEANGI 70
           PPSL+    VS+LL  +G W+   + A+F  + V  +LS+P       D   W +  +G 
Sbjct: 343 PPSLT---HVSTLLLPNGDWNIPLLRASFQQDTVNDILSLPPPDPSKPDTYFWQHSTSGH 402

Query: 71  LSVRSGYRLA-QSIDLCSIPSSSSSSFSCWWKGMWKIILMFPP----IVFLVADRVNPPF 130
            SVR+GY +A Q+I+     SS++ + + WWK +W+  L  PP     V+ +A    P  
Sbjct: 403 YSVRTGYHVAKQAINRVQPSSSNTETLTRWWKSLWR--LPIPPKIRHFVYRLAQHSLP-- 462

Query: 131 MCSGSVKPLVVNERCQNFGYLWQSDFLGLAPSIFHLLCEIQD-RLGWS-EFEAMAVFLWQ 190
                    + N  C +     +        S+ H L E Q+ +  WS EF      LW+
Sbjct: 463 -----TTNNLYNRHCISSPICPKCSL--CFESVQHALFECQEMKKAWSDEFNLFLCMLWK 522

Query: 191 LWNNRN--FWKFQGSDPLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSVSWTPPAEG 250
            WN RN   ++ Q S P       A+D+L  + AAQ        S  D   + W PP  G
Sbjct: 523 CWNARNASVFRNQVSRP-ETIEQEAQDYLAFYQAAQDKRWNHSQSTSDRDLLVWEPPPVG 582

Query: 251 VYKVNVDASFLSGENIAAGGIIVRDSDGQVLLSATKF--FGVLSSVDLAEGFAIKEGLNL 306
             K+N DA+  S +N   GG +VRD  G++ ++AT F   G L     AEG+A+ E L  
Sbjct: 583 FLKLNTDAAISSHQNRTGGGALVRDHTGKI-IAATAFNRIGQLHP-QAAEGWALLEALKW 631

BLAST of Lcy08g014000 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 32/92 (34.78%), Postives = 45/92 (48.91%), Query Frame = 0

Query: 181 LWQLWNNRNFWKFQGSD-PLVPAWYRAEDFLQLFSAAQSALCVQRFSGGDASSV-SWTPP 240
           LW+LWN+RN   FQ    P       A+  LQ ++ A +   +        S + +W  P
Sbjct: 447 LWRLWNSRNILYFQRRHVPWETTLQLAQMDLQEWNEAVTPSHINSHGTTIRSHIPNWRRP 506

Query: 241 AEGVYKVNVDASFLSGENIAAGGIIVRDSDGQ 271
             G  K NVD SF++G     GG IVRD +G+
Sbjct: 507 TNGWVKCNVDGSFINGNIPGKGGWIVRDHNGR 538

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAR43.1e-4036.64uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5E4FZN92.8e-2529.05PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1[more]
A0A6J1D5K14.1e-2430.69uncharacterized protein LOC111017816 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J5TGK77.8e-2329.37CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS... [more]
A0A5B7A5C86.6e-2226.71Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022150918.16.5e-4036.64uncharacterized protein LOC111018954 [Momordica charantia][more]
VVA32947.15.9e-2529.05PREDICTED: retrotransposon [Prunus dulcis][more]
XP_022149385.18.5e-2430.69uncharacterized protein LOC111017816 [Momordica charantia][more]
XP_024046732.12.5e-2327.63uncharacterized protein LOC112101057 [Citrus clementina][more]
KAF4364303.15.5e-2331.05hypothetical protein G4B88_028423 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT2G33160.11.9e-0534.78glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 246..305
e-value: 1.9E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 35..298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g014000.1Lcy08g014000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity