Lcy08g012920 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATCAAAGACAGGTGGTTAAGATTGGTAGAAAATTCAATGGAAGCATTGGAGAGGATCTGTGTGGGAGCCTGGGCAATTTGGAACGACAGGAATAATATAATTCACCAGCGCCAGGTTCCTAGCCCATTAGTTAGATGTGAATGGATTAATGATTACCTGTTAGAGTTCTTGAAGGCCAATCCGAAAACCATGACTCCTCAGACAAAGGAGGACGTTGGAAATATAATCTCTGAGGGAGAATACTTGATTATGCATACAGATGCATCTGTTATGGGAGGGCAAAGTACATGCGGTATGGGGATTGTGCTGCGTGATAAACAAGGGAATTTAAAGGCGGTGCAGAGTGCTTGTACTAGGGCGTATGCAACTCCTTTGGAAGCAGAAGCATTGGCGGTGCTTGAAGGGATGCGTTTGGCTATGTTGTTAAATGTTAAGCGCCTGACAGTCTTGTCGGATTCATTGACTGTGATAAATTCAATAAACGACAAGATACAGGTGGAGTCCTCTATTGTGACGACGTTGTGGGACATCAAAGAAATCCATAAGCTTTTTGATTGTATAACTTTCCATTTTACAAGTCACAAAATTAATGGCTTTGCTCATAGAGTGGCCCGAATGGGTTTATTTACATCACCACTGTAACGCCCCAGGCCCAGGATTCGGAATTCGGATTTGGCACCTAAGGCCCCGCTATTCCCCTGCGACCTGGCCACGTCACCATACTTGTCTGATACTACTTCTAAGATTGAAGATTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGTTTTGTCCTCACTCACATACTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTTTCCAAGCCAAGCACGCTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGCTTCTCTAGGCCATACTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTACCCCTCCTAACTTCGGGTGTCACATGCCCACCAGCTTCCGCCTTGGTTCGTCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATCTGTAACGCCCCAGGCCCAGGATTTGGAATTCGGATTTGGCACCTAAGGCCCCGCTATTCCCCTGCGACCTGGCCACGTCACCATACTTGTCTGATACTACTTCTAAGATTGAAGATTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTCTCCAAACCAAGCACGCTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGCTTCTCTAGGCCATACTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTATCCCTCCTAACTTCGGGTGTCACAACCACAATTGTGGTTAGGGGACTATCTTGAGTGGATGGTTGGATTGTTGCTCAAGGAGCGATGCTTATTTGTATCCCTTGGGGATTCTTTTCTGTGTTGAATGAAATTTCTTTACTATAAAAAAAAAAAAAAAAAAAAAAAAGGTACACGATTTAGTCGTCCACTATACCCTACCTCATCCTTCCTTTTCTCCCTCGCGCCGACAGACCTCGCCTTCCTCAGGTTTTTTTTTTCTTCCTACATAATAACTTTGTTCAAGACAACATTTTTCTATGGAACAAAATATACCACAGTTAGGTTTTATGTGTGAGCAATACGTCATAAATATAACTGACATCATTCAACAAACTTGGAGGCTAATCGTTGCTGACACTGATAAGACGTGTGCTTGTCGCAGACGTCGTTGA ATGGATATCAAAGACAGGTGGTTAAGATTGGTAGAAAATTCAATGGAAGCATTGGAGAGGATCTGTGTGGGAGCCTGGGCAATTTGGAACGACAGGAATAATATAATTCACCAGCGCCAGGTTCCTAGCCCATTAGTTAGATGTGAATGGATTAATGATTACCTGTTAGAGTTCTTGAAGGCCAATCCGAAAACCATGACTCCTCAGACAAAGGAGGACGTTGGAAATATAATCTCTGAGGGAGAATACTTGATTATGCATACAGATGCATCTGTTATGGGAGGGCAAAGTACATGCGGTATGGGGATTGTGCTGCGTGATAAACAAGGGAATTTAAAGGCGGTGCAGAGTGCTTGTACTAGGGCGTATGCAACTCCTTTGGAAGCAGAAGCATTGGCGGTGCTTGAAGGGATGCGTTTGGCTATGTTGTTAAATGTTAAGCGCCTGACAGTCTTGTCGGATTCATTGACTGTGATAAATTCAATAAACGACAAGATACAGTTAGGTTTTATGTGTGAGCAATACGTCATAAATATAACTGACATCATTCAACAAACTTGGAGGCTAATCGTTGCTGACACTGATAAGACGTGTGCTTGTCGCAGACGTCGTTGA ATGGATATCAAAGACAGGTGGTTAAGATTGGTAGAAAATTCAATGGAAGCATTGGAGAGGATCTGTGTGGGAGCCTGGGCAATTTGGAACGACAGGAATAATATAATTCACCAGCGCCAGGTTCCTAGCCCATTAGTTAGATGTGAATGGATTAATGATTACCTGTTAGAGTTCTTGAAGGCCAATCCGAAAACCATGACTCCTCAGACAAAGGAGGACGTTGGAAATATAATCTCTGAGGGAGAATACTTGATTATGCATACAGATGCATCTGTTATGGGAGGGCAAAGTACATGCGGTATGGGGATTGTGCTGCGTGATAAACAAGGGAATTTAAAGGCGGTGCAGAGTGCTTGTACTAGGGCGTATGCAACTCCTTTGGAAGCAGAAGCATTGGCGGTGCTTGAAGGGATGCGTTTGGCTATGTTGTTAAATGTTAAGCGCCTGACAGTCTTGTCGGATTCATTGACTGTGATAAATTCAATAAACGACAAGATACAGTTAGGTTTTATGTGTGAGCAATACGTCATAAATATAACTGACATCATTCAACAAACTTGGAGGCTAATCGTTGCTGACACTGATAAGACGTGTGCTTGTCGCAGACGTCGTTGA MDIKDRWLRLVENSMEALERICVGAWAIWNDRNNIIHQRQVPSPLVRCEWINDYLLEFLKANPKTMTPQTKEDVGNIISEGEYLIMHTDASVMGGQSTCGMGIVLRDKQGNLKAVQSACTRAYATPLEAEALAVLEGMRLAMLLNVKRLTVLSDSLTVINSINDKIQLGFMCEQYVINITDIIQQTWRLIVADTDKTCACRRRR Homology
BLAST of Lcy08g012920 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.1e-12 Identity = 52/166 (31.33%), Postives = 81/166 (48.80%), Query Frame = 0
BLAST of Lcy08g012920 vs. ExPASy TrEMBL
Match: A0A6J1DZK3 (uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024968 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10 Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = 0
BLAST of Lcy08g012920 vs. ExPASy TrEMBL
Match: A0A803Q185 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.5e-10 Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 0
BLAST of Lcy08g012920 vs. ExPASy TrEMBL
Match: A0A1U8P8B0 (uncharacterized protein LOC107956232 OS=Gossypium hirsutum OX=3635 GN=LOC107956232 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09 Identity = 53/180 (29.44%), Postives = 85/180 (47.22%), Query Frame = 0
BLAST of Lcy08g012920 vs. ExPASy TrEMBL
Match: A0A7J6HML3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_005782 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 0
BLAST of Lcy08g012920 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 81.6 bits (200), Expect = 8.4e-12 Identity = 52/166 (31.33%), Postives = 81/166 (48.80%), Query Frame = 0
BLAST of Lcy08g012920 vs. NCBI nr
Match: XP_030930858.1 (uncharacterized protein LOC115956689 [Quercus lobata]) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 0
BLAST of Lcy08g012920 vs. NCBI nr
Match: XP_022158489.1 (uncharacterized protein LOC111024968 [Momordica charantia]) HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10 Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = 0
BLAST of Lcy08g012920 vs. NCBI nr
Match: XP_040960280.1 (uncharacterized protein LOC121223215 [Gossypium hirsutum]) HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09 Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 0
BLAST of Lcy08g012920 vs. NCBI nr
Match: XP_030485460.1 (uncharacterized protein LOC115702143 [Cannabis sativa]) HSP 1 Score: 73.6 bits (179), Expect = 2.3e-09 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 0
BLAST of Lcy08g012920 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.4e-04 Identity = 39/148 (26.35%), Postives = 63/148 (42.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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